![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Timeline
Mar 25, 2022:
- 6:46 PM Ticket #6468 (Crash in Qt event loop after saving sessions with maps) created by
- […]
- 12:23 PM Ticket #6467 (Crash after opening sessions containing volumes) created by
- […]
- 11:13 AM Ticket #6466 (Failure opening entries 51 and 94 from PDBDev) created by
- […]
- 9:03 AM Ticket #6465 (Crash showing ribbons) created by
- […]
- 6:47 AM Ticket #6464 (Graphics driver crash, Linux, RTX 3080, in swap_buffers) created by
- […]
- 6:20 AM Ticket #6463 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 5:43 AM Ticket #6462 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 5:37 AM Ticket #6461 (Crash using File→Open on Windows and/or in return statement) created by
- […]
Mar 24, 2022:
- 6:28 PM Dev2022-3-24 edited by
- (diff)
- 4:53 PM Ticket #6460 (Bug reporter not in tool window list) closed by
- duplicate
- 4:51 PM Ticket #6459 (Bug reporter not in tool window list) closed by
- duplicate
- 4:50 PM Ticket #6458 (Bug reporter not in tool window list) closed by
- can't reproduce: Bringing up Big Reporter on Linux and neither closing it by clicking …
- 4:33 PM Dev2022-3-24 edited by
- (diff)
- 4:17 PM Ticket #6453 (Segger: ModuleNotFoundError: No module named 'Surface') closed by
- fixed: Fixed. Segger error if group by connected used with visible only …
- 4:07 PM Ticket #6448 (Crash in lx4/session saving) closed by
- limitation: There are several tracebacks in the log: * KeyError: "No known data …
- 3:40 PM Ticket #6457 (Problem saving settings file) closed by
- duplicate
- 3:36 PM Ticket #6456 (Crash in event loop) closed by
- can't reproduce
- 3:34 PM Ticket #6454 (Unknown crash) closed by
- can't reproduce
- 3:28 PM Ticket #6452 (Crash saving session(?)) closed by
- can't reproduce
- 2:28 PM Ticket #6446 (Crash using File→Open dialog on Windows and/or returning from function) closed by
- can't reproduce: Hi Nebojsa, Thanks for reporting this problem. We are finding this …
- 1:06 PM Ticket #6444 (Keyboard interrupt (hang?)) closed by
- can't reproduce
- 12:38 PM 2022-3-24 edited by
- (diff)
- 12:10 PM Ticket #6460 (Bug reporter not in tool window list) created by
- […]
- 12:10 PM Ticket #6459 (Bug reporter not in tool window list) created by
- […]
- 12:10 PM Ticket #6458 (Bug reporter not in tool window list) created by
- […]
- 10:45 AM Ticket #6457 (Problem saving settings file) created by
- […]
- 9:28 AM Ticket #6456 (Crash in event loop) created by
- […]
- 9:19 AM Ticket #6455 (ISOLDE: crash in find_clashing_atoms) created by
- […]
- 7:11 AM Ticket #6454 (Unknown crash) created by
- […]
- 6:42 AM Ticket #6453 (Segger: ModuleNotFoundError: No module named 'Surface') created by
- […]
- 6:14 AM Ticket #6452 (Crash saving session(?)) created by
- […]
- 2:33 AM Ticket #6451 (ChimeraX 1.3 start up error) created by
- […] ChimeraX1.3_log.txt …
- 1:45 AM Ticket #6450 (Make open dialog modeless) created by
- The open file dialog is currently modal. Would be easier to use if …
Mar 23, 2022:
- 8:08 PM Ticket #6449 (Quick Start tutorial links give "Your Internet connection is blocked") created by
- On macOS 12.3 my development ChimeraX builds with Qt 6 and unsigned …
- 7:50 PM Ticket #6448 (Crash in lx4/session saving) created by
- […]
- 7:47 PM Ticket #6440 (Crash calculating mesh edges for square mesh volume display) closed by
- can't reproduce: Testing on a 480 by 480 by 480 map (EMDB 12873 at level 0.01) suggests …
- 7:20 PM Ticket #6447 (ChimeraX Mac build fails with Anaconda installed) closed by
- fixed: Fixed by taking /opt/anaconda3/bin out of the executable search path …
- 7:19 PM Ticket #6447 (ChimeraX Mac build fails with Anaconda installed) created by
- With Anaconda installed on my macOS 12.3 laptop with M1 CPU in …
- 2:01 PM Ticket #6446 (Crash using File→Open dialog on Windows and/or returning from function) created by
- […]
- 1:43 PM Ticket #6413 (Windows Qt6 editable combobox font problematic) closed by
- fixed: Previous comment wasn't intended for this ticket. Anyway, have …
- 12:18 PM Ticket #6445 (ISOLDE/OpenMM: Error initializing context: clCreateContext) created by
- […]
- 11:51 AM Ticket #6441 (Crash in self.graphics_window.mapFromGlobal(QCursor.pos())) closed by
- can't reproduce: Log has no commands, so appears to have crashed on startup. But …
- 11:46 AM Ticket #6444 (Keyboard interrupt (hang?)) created by
- […]
- 11:31 AM Ticket #6438 (Crash switching from Rapid Access to main graphics Window) closed by
- can't reproduce: The user was running some plugin code that triggered when opening a …
- 11:16 AM Ticket #6443 (Make faulthandler handle multiple running ChimeraX instances) created by
- On Windows or Linux a user can easily start more than one instance of …
- 11:12 AM Ticket #6436 (Crash drawing status line) closed by
- can't reproduce: The fault handler output lists 3 "Windows fatal exception: access …
- 10:33 AM Ticket #6442 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 10:27 AM Ticket #6439 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 9:41 AM Ticket #6435 (Crash using non-native open file dialog on Windows) closed by
- can't reproduce
- 9:38 AM Ticket #6442 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 5:25 AM Ticket #6441 (Crash in self.graphics_window.mapFromGlobal(QCursor.pos())) created by
- […]
- 4:39 AM Ticket #6440 (Crash calculating mesh edges for square mesh volume display) created by
- […]
- 2:25 AM Ticket #6439 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 1:39 AM Ticket #6438 (Crash switching from Rapid Access to main graphics Window) created by
- […]
Mar 22, 2022:
- 8:09 PM Ticket #6437 (Windows fatal exception: code 0x800706ba. No crash) created by
- […] crash_traceback.txt
- 6:56 PM Ticket #6426 (Crash in self.graphics_window.mapFromGlobal(QCursor.pos())) closed by
- can't reproduce: Looks like a crash at startup since the log had no commands. Log says …
- 5:54 PM phenix-done-3-24-22 edited by
- (diff)
- 5:53 PM phenix-done-3-24-22 edited by
- (diff)
- 5:46 PM phenix-done-3-24-22 edited by
- (diff)
- 5:31 PM phenix-proposed-3-24-22 edited by
- (diff)
- 5:31 PM phenix-proposed-3-24-22 edited by
- (diff)
- 5:24 PM phenix-proposed-3-24-22 edited by
- (diff)
- 5:11 PM phenix-what-3-24-22 edited by
- (diff)
- 5:10 PM phenix-done-3-24-22 created by
- 4:56 PM phenix-proposed-3-24-22 edited by
- (diff)
- 4:49 PM Ticket #6436 (Crash drawing status line) created by
- […]
- 4:49 PM phenix-proposed-3-24-22 created by
- 4:23 PM phenix-what-3-24-22 edited by
- (diff)
- 2:00 PM phenix-what-3-24-22 created by
- 1:59 PM phenix-3-24-22 created by
- 1:52 PM Features edited by
- (diff)
- 1:38 PM Ticket #6435 (Crash using non-native open file dialog on Windows) created by
- […]
- 1:24 PM Dev2022-3-24 created by
- 1:23 PM 2022-3-24 created by
- 1:20 PM DeveloperMeetings edited by
- (diff)
- 12:44 PM Ticket #6434 (Support pyproject.toml) created by
- We should not make this a high priority as many infrastructure …
- 10:31 AM Ticket #6433 (Crash using File→Open on Windows) closed by
- can't reproduce
- 10:30 AM Ticket #6432 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 10:28 AM Ticket #6431 (Crash showing Rapid Access at startup) closed by
- can't reproduce
- 10:27 AM Ticket #6430 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 10:25 AM Ticket #6427 ([ChimeraX] OpenGL.error.GLError: GLError with VirtualGL 3.0 and ...) closed by
- nonchimerax: That appears to be a VirtualGL bug. Please file a bug at …
- 9:58 AM Ticket #6429 (Crash using File→Open on Windows and/or in return statement) closed by
- duplicate: Hi Frank, This is a very intermittent (Windows only) problem and not …
- 9:53 AM Ticket #6428 (name 'critera' is not defined) closed by
- duplicate: Hi Kelvin, Thanks for reporting this problem. This issue is fixed in …
- 7:09 AM Ticket #6433 (Crash using File→Open on Windows) created by
- […]
- 6:21 AM Ticket #6432 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 6:01 AM Ticket #6431 (Crash showing Rapid Access at startup) created by
- […]
Mar 21, 2022:
- 11:06 PM Ticket #6430 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 10:28 PM Ticket #6429 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 9:35 PM Ticket #6428 (name 'critera' is not defined) created by
- […]
- 5:57 PM Ticket #6427 ([ChimeraX] OpenGL.error.GLError: GLError with VirtualGL 3.0 and ...) created by
- […]
- 3:48 PM ChangeLog edited by
- (diff)
- 3:39 PM Ticket #6407 (Make combine command create shorter new chain ids) closed by
- fixed: next_chain_id() was only incrementing single-character chains correctly
- 3:05 PM Ticket #6426 (Crash in self.graphics_window.mapFromGlobal(QCursor.pos())) created by
- […]
- 2:43 PM Ticket #6425 (Qt6: Mac default button goes blank if dialog loses focus) created by
- On a Mac, bring up MatchMaker and then click into the model panel. …
- 1:47 PM Ticket #6424 (Problem restoring session: invalid load key) closed by
- duplicate: Hi Sharmishtha, This problem occurs when trying to open a session …
- 1:40 PM Ticket #6424 (Problem restoring session: invalid load key) created by
- […]
- 1:31 PM Ticket #6423 (Crash getting Ring information) closed by
- duplicate
- 1:28 PM Ticket #6422 (Crash using File→Open on Windows) closed by
- can't reproduce: Qt5
- 1:26 PM Ticket #6421 (ChimeraX does not work on windows server running RDS) closed by
- duplicate: Asked/answered on the chimerax-users list.
- 1:25 PM Ticket #6420 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: Qt5
- 1:20 PM Ticket #6418 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: Qt6
- 1:18 PM Ticket #6417 (Crash using File→Open on Windows) closed by
- can't reproduce: Qt5
- 12:15 PM Ticket #6410 (Crash in VerletIntegrator) closed by
- can't reproduce: Crashed simply doing: […] No idea what might have precipitated that.
- 11:54 AM Ticket #6412 (Crash while running AlphaFold prediction) closed by
- can't reproduce: Probably a Qt html widget crash in Qt 5.15. Hope that Qt 6 fixes it.
- 11:49 AM Ticket #6415 ('DefaultApi' object has no attribute 'newer_versions') closed by
- duplicate: Duplicate of #5984
- 10:17 AM Ticket #6411 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 10:13 AM Ticket #6409 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 5:59 AM Ticket #6423 (Crash getting Ring information) created by
- […]
- 5:32 AM Ticket #6422 (Crash using File→Open on Windows) created by
- […]
- 5:27 AM Ticket #6421 (ChimeraX does not work on windows server running RDS) created by
- […]
- 4:50 AM Ticket #6420 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 2:08 AM Ticket #6419 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 1:58 AM Ticket #6418 (Crash using File→Open on Windows and/or in return statement) created by
- […]
Mar 20, 2022:
- 11:35 PM Ticket #6417 (Crash using File→Open on Windows) created by
- […]
- 8:44 PM Ticket #6416 (Out of space saving log text to file for loading as HTML) created by
- […]
- 2:06 AM Ticket #6415 ('DefaultApi' object has no attribute 'newer_versions') created by
- […]
Mar 19, 2022:
- 9:13 PM Ticket #6414 (Crash creating QWebEngineProfile) created by
- […]
- 11:13 AM Ticket #6413 (Windows Qt6 editable combobox font problematic) created by
- […] cmd line descenders.zip
- 3:09 AM Ticket #6412 (Crash while running AlphaFold prediction) created by
- […]
- 2:45 AM Ticket #6411 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 2:03 AM Ticket #6410 (Crash in VerletIntegrator) created by
- […]
Mar 18, 2022:
- 11:58 PM Ticket #6409 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 6:01 PM Ticket #6408 (Saving GLTF: Structure' object has no attribute 'is_visible') closed by
- fixed: Fixed. Code was using is_visible attribute instead of visible …
- 5:58 PM Ticket #6408 (Saving GLTF: Structure' object has no attribute 'is_visible') created by
- […]
- 5:55 PM Ticket #5031 (How to copy a Sequence Viewer subsequence to the clip board) closed by
- fixed: Implemented same copy-sequence feature set that Chimera had. Dialog …
- 5:49 PM Ticket #6405 ("label height" not accepting non-integer) closed by
- duplicate: I see now. The error is from the label height GUI, menu entry Actions …
- 5:42 PM Ticket #6407 (Make combine command create shorter new chain ids) created by
- […]
- 11:14 AM Ticket #6404 (Menu items not properly displayed in Segment Map pane) closed by
- fixed: If you mean the menu bar on the Segment Map (Segger) panel has …
- 9:17 AM Ticket #6406 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 4:21 AM Ticket #6406 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 2:02 AM Ticket #6405 ("label height" not accepting non-integer) created by
- […]
Mar 17, 2022:
- 8:00 PM Ticket #6404 (Menu items not properly displayed in Segment Map pane) created by
- […]
- 4:19 PM Ticket #6370 (Breaking QCheckbox stateChanged signal change in Qt6) closed by
- wontfix: Closing for now since a workaround has been decided on. If at any …
- 3:34 PM Ticket #6392 (cannot import name 'QWebEngineDownloadRequest' from 'Qt.QtWebEngineCore') closed by
- fixed: Thank you for your bug report. I believe this problem was fixed some …
- 3:27 PM Ticket #6356 (PrefersNonDefaultGPU=true) closed by
- nonchimerax: What is the output of "lspci | grep VGA"? I want to confirm that the …
- 2:19 PM Ticket #6362 (uic not in Qt shim) closed by
- not a bug: OK, closing for now but feel free to send me an email if you need me …
- 2:00 PM Ticket #6399 (Crash using File→Open dialog on Windows and/or returning from function) closed by
- can't reproduce
- 1:56 PM Ticket #6398 (Crash in garbage collection during new object allocation) closed by
- duplicate: Hi Kasey, Thanks for reporting this problem. We believe it was a …
- 1:50 PM Ticket #6403 (Add a centering option when saving GLTF) created by
- Phil Cruz mentioned in today's NIAID / ChimeraX meeting that he needed …
- 1:49 PM Ticket #6397 (Crash using File→Open dialog on Windows and/or returning from function) closed by
- can't reproduce
- 1:46 PM Ticket #6396 (Crash in event loop after matchmaker) closed by
- can't reproduce
- 1:45 PM Ticket #6395 (Crash in event loop) closed by
- can't reproduce
- 1:43 PM Ticket #6402 (QWebEnginePage has no view() method) created by
- Reproduce by opening 5uhb and clicking on "rifampicin" in the …
- 1:40 PM NTTData edited by
- (diff)
- 1:39 PM NTTData edited by
- (diff)
- 1:36 PM NTTData edited by
- (diff)
- 1:23 PM NTTData edited by
- (diff)
- 1:00 PM Ticket #6394 (Crash using File→Open dialog on Windows and/or adding trigger handler) closed by
- can't reproduce
- 12:53 PM Ticket #6393 (Crash in event loop) closed by
- can't reproduce
- 12:20 PM 2022-3-17 edited by
- (diff)
- 12:20 PM 2022-3-17 edited by
- (diff)
- 11:04 AM Ticket #6401 (problem opening solid state NMR structures (7K3G)) created by
- […]
- 10:56 AM Ticket #6400 (Toolshed offers Install button for ISOLDE when dependencies not met) created by
- […]
- 10:54 AM Ticket #6391 (Phenix douse log link crashes ChimeraX) closed by
- duplicate: It's because of the long atom spec issued by the link's "sel" command. …
- 7:42 AM Ticket #6399 (Crash using File→Open dialog on Windows and/or returning from function) created by
- […]
- 7:15 AM Ticket #6398 (Crash in garbage collection during new object allocation) created by
- […]
- 7:06 AM Ticket #6397 (Crash using File→Open dialog on Windows and/or returning from function) created by
- […]
- 3:06 AM Ticket #6396 (Crash in event loop after matchmaker) created by
- […]
- 2:44 AM Ticket #6395 (Crash in event loop) created by
- […]
Mar 16, 2022:
- 11:48 PM Ticket #6394 (Crash using File→Open dialog on Windows and/or adding trigger handler) created by
- […]
- 11:26 PM Ticket #6393 (Crash in event loop) created by
- […]
- 8:20 PM Ticket #6330 (KeyError handling Blast results) closed by
- fixed: I added some defensive code to the blastprotein bundle to handle the …
- 5:35 PM Ticket #6392 (cannot import name 'QWebEngineDownloadRequest' from 'Qt.QtWebEngineCore') created by
- […]
- 2:00 PM Ticket #6391 (Phenix douse log link crashes ChimeraX) created by
- […]
- 10:51 AM Ticket #6388 (Crash using File→Open on Windows) closed by
- can't reproduce
- 10:48 AM Ticket #6387 (Found H-bonds differ) closed by
- not a bug: Hi, It looks like that when you used the tool you unchecked the …
- 10:33 AM Ticket #6385 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 10:30 AM Ticket #6390 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 9:47 AM Ticket #6389 (Toolshed list of bundle developers gives error) created by
- Using the Toolshed web page "Bundle Developers" link gives a long …
- 9:03 AM Ticket #6388 (Crash using File→Open on Windows) created by
- […]
- 5:31 AM Ticket #6387 (Found H-bonds differ) created by
- […]
- 4:03 AM Ticket #6386 (Avoid opening a zillion alignments) created by
- […]
- 3:17 AM Ticket #6385 (Crash using File→Open on Windows and/or in return statement) created by
- […]
Mar 15, 2022:
- 5:13 PM Ticket #6384 (Host Trac using a cloud service) created by
- We should investigate hosting our Trac databases for Chimera and …
- 2:45 PM Ticket #6383 (MD Viewer: could not broadcast input array from shape (0) into shape (0,3)) created by
- […] coords.pdb
- 1:54 PM Ticket #6380 (Qt6: SortOrder no longer castable to int) closed by
- fixed: Hi Gulriz, This is fixed in tomorrow's daily build. --Eric Eric …
- 12:46 PM Ticket #6382 (Bad Qt6 import in help viewer causing Qt5 problems) closed by
- fixed: I believe this problem was fixed in …
- 12:29 PM Ticket #6382 (Bad Qt6 import in help viewer causing Qt5 problems) created by
- […]
- 11:25 AM Ticket #4692 (Loading coordsets does not bring up slider + related problems) closed by
- fixed: Was fixed in September of last year when the 'slider' option (default …
- 11:17 AM Ticket #6381 (Add a tug command) created by
- Would be nice to have a tug command that would allow tugging specified …
- 10:06 AM Ticket #6377 (Crash saving/encoding movie(?)) closed by
- can't reproduce: Top hits for this error code "Windows fatal exception: code …
- 9:57 AM 2022-3-17 created by
- 9:56 AM DeveloperMeetings edited by
- (diff)
- 6:50 AM Ticket #6380 (Qt6: SortOrder no longer castable to int) created by
- […]
- 6:39 AM Ticket #6379 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 4:27 AM Ticket #6378 (Registration check: 'utf-8' codec can't decode byte) created by
- […]
Mar 14, 2022:
- 9:38 PM Ticket #6377 (Crash saving/encoding movie(?)) created by
- […]
- 5:48 PM Ticket #6376 (Segger menu bar text squished on Mac with Qt 6) closed by
- fixed: Fixed. Work around Qt bug with explicit width and height for File and …
- 5:42 PM Ticket #6376 (Segger menu bar text squished on Mac with Qt 6) created by
- […]
- 5:17 PM Ticket #6375 (Segger make_surfaces recursion) closed by
- fixed: Fixed. The Segger menu entry Regions / Regions Overlapping Current …
- 3:58 PM Ticket #6371 (Graphics crash, macOS 10.14.6, Intel Iris Plus Graphics 650) closed by
- nonchimerax: Apple graphics driver crash.
- 1:27 PM Ticket #6348 (Parsing BlastProtein results failed: 'hits') closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/ffd748d1417c0346643bc57287d768 …
- 12:38 PM Ticket #6375 (Segger make_surfaces recursion) created by
- […]
- 12:00 PM Ticket #6374 (Crash in removeDockWidget()) closed by
- can't reproduce
- 11:59 AM ChangeLog edited by
- (diff)
- 11:57 AM Ticket #6372 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 11:53 AM Ticket #6369 (Qt6 shell tab-completion crash) closed by
- duplicate: Duplicate of #6363; adding Tony to recipient list for that ticket
- 11:51 AM Ticket #6368 (H-bonds: acc_phi_psi() takes 8 positional arguments but 9 were given) closed by
- can't reproduce: This *typically* happens for structures with bad connectivity, but I …
Mar 12, 2022:
- 10:48 PM Ticket #6374 (Crash in removeDockWidget()) created by
- […]
- 10:58 AM Ticket #6373 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 7:42 AM Ticket #6372 (Crash using File→Open on Windows and/or in return statement) created by
- […]
Mar 12, 2022:
- 11:06 PM Ticket #6371 (Graphics crash, macOS 10.14.6, Intel Iris Plus Graphics 650) created by
- […]
- 10:41 PM Ticket #6370 (Breaking QCheckbox stateChanged signal change in Qt6) created by
- […]
- 10:18 PM Ticket #6369 (Qt6 shell tab-completion crash) created by
- […]
- 7:27 PM Ticket #6368 (H-bonds: acc_phi_psi() takes 8 positional arguments but 9 were given) created by
- […]
Mar 11, 2022:
- 6:33 PM Ticket #6367 (Crash opening PDB file) created by
- […] Pert_2PEG_400_model_cordUNG.pdb
- 2:09 PM Ticket #6268 (Release PyQt6 to the daily builds) closed by
- fixed: It's out!
- 1:18 PM Ticket #6366 ("log metadata" info not preserved through sessions) created by
- […]
- 12:19 PM Ticket #6365 (Loading pickled file in thread crashes) created by
- […]
- 12:06 PM Ticket #6364 (Qt6 shell tab-completion crash) closed by
- duplicate
- 11:44 AM Ticket #6360 (Graphics crash, macOS 12.2.1, Intel HD Graphics 615) closed by
- nonchimerax: Apple graphics driver crash.
- 11:44 AM Ticket #6364 (Qt6 shell tab-completion crash) created by
- […]
- 11:42 AM Ticket #6359 (Graphics crash, macOS 10.13.6, Intel Iris Plus Graphics 655) closed by
- nonchimerax: Apple graphics driver crash.
- 11:40 AM Ticket #6358 (Graphics crash, macOS 11.6.4, Intel Iris Plus Graphics 655, dual display) closed by
- nonchimerax: Apple graphics driver crash.
- 11:03 AM Ticket #6363 (Qt6 shell tab-completion crash) created by
- […]
- 10:15 AM Ticket #6361 (ISOLDE Qt6 splash screen crash) closed by
- invalid: Wait, crap - my bad. Seems somehow I forgot to actually commit the fix …
- 9:54 AM Ticket #6362 (uic not in Qt shim) created by
- […]
- 9:50 AM Ticket #6361 (ISOLDE Qt6 splash screen crash) created by
- […]
- 9:43 AM Ticket #6357 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 8:45 AM Ticket #6360 (Graphics crash, macOS 12.2.1, Intel HD Graphics 615) created by
- […]
- 6:44 AM Ticket #6359 (Graphics crash, macOS 10.13.6, Intel Iris Plus Graphics 655) created by
- […]
- 3:24 AM Ticket #6358 (Graphics crash, macOS 11.6.4, Intel Iris Plus Graphics 655, dual display) created by
- […]
- 12:52 AM Ticket #6357 (Crash using File→Open on Windows and/or in return statement) created by
- […]
Mar 10, 2022:
- 6:32 PM Ticket #6356 (PrefersNonDefaultGPU=true) created by
- […] UCSF-ChimeraX-1.3.desktop
- 6:00 PM Ticket #6355 (Toolbar: AttributeError: 'QDropEvent' object has no attribute 'pos') created by
- […]
- 3:56 PM Dev2022-3-10 edited by
- (diff)
- 3:56 PM Ticket #6345 (BLAST search takes 60 seconds in daily build, 7 seconds in ChimeraX 1.3) closed by
- fixed
- 3:07 PM Ticket #6354 (Session restore: invalid load key) closed by
- duplicate
- 3:05 PM Ticket #6353 (model loops: chain not in match maps) closed by
- duplicate
- 3:04 PM Ticket #6352 (model loops: chain not in match maps) closed by
- fixed
- 2:57 PM Ticket #6347 (Matchmaker: no reference chains) closed by
- can't reproduce
- 2:55 PM Ticket #6351 (Crash in event loop) closed by
- can't reproduce: Classic
- 2:47 PM Ticket #6350 (no region.destroy() method) closed by
- fixed
- 2:46 PM 2022-3-10 edited by
- (diff)
- 12:05 PM Ticket #6349 (glClear: invalid framebuffer operation) closed by
- duplicate: OpenGL error trying to draw status line. Possibly related to …
- 10:39 AM Ticket #6354 (Session restore: invalid load key) created by
- […]
- 9:49 AM Ticket #6353 (model loops: chain not in match maps) created by
- […]
- 9:49 AM Ticket #6352 (model loops: chain not in match maps) created by
- […]
- 9:45 AM Ticket #6344 (Various old errors) closed by
- duplicate
- 6:52 AM Ticket #6351 (Crash in event loop) created by
- […]
- 5:06 AM Ticket #6350 (no region.destroy() method) created by
- […]
- 1:30 AM Ticket #6349 (glClear: invalid framebuffer operation) created by
- […]
Mar 9, 2022:
- 7:25 PM Ticket #6336 (RealSense camera view clips VR gui elements) closed by
- fixed: Fixed. Code had TODO comment about exactly this problem saying VR …
- 5:21 PM ChangeLog edited by
- (diff)
- 5:14 PM ChangeLog edited by
- (diff)
- 4:27 PM Ticket #6348 (Parsing BlastProtein results failed: 'hits') created by
- […]
- 3:37 PM Ticket #6303 (Help viewer context menu not working in Qt6) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/8ec79323819f453f2bb6c3b12a6fdc …
- 3:05 PM Ticket #6347 (Matchmaker: no reference chains) created by
- […]
- 2:41 PM Ticket #6346 (Speed up AlphaFold database search possibly with mmseqs2) created by
- Currently the "alphafold match" command currently takes about 12 …
- 2:32 PM Ticket #6345 (BLAST search takes 60 seconds in daily build, 7 seconds in ChimeraX 1.3) created by
- […]
- 12:05 PM Ticket #6271 (in techpreview Help Viewer (browser), trying to copy text gives traceback) closed by
- fixed: As I said in comment:4:ticket:6270, QWebEnginePage moved to …
- 12:04 PM Ticket #6270 (in techpreview, trying to get context menu in ChimeraX help viewer ...) closed by
- fixed: As I said in comment:3:ticket:6303, QWebEnginePage moved to …
- 12:03 PM Ticket #6344 (Various old errors) created by
- […]
- 12:02 PM Ticket #6343 (Update search of AlphaFold database to January 2022 version) closed by
- fixed: Updated and tested. BLAST search of AlphaFold now takes 60 seconds.
- 12:02 PM Ticket #6343 (Update search of AlphaFold database to January 2022 version) created by
- EBI made their 3rd update to the AlphaFold database on January 27, …
- 11:51 AM Ticket #6335 (Toolshed install of bundles broken with Qt 6) closed by
- fixed: Should be fixed by …
- 10:03 AM Ticket #6341 (Graphics crash, macOS 11.6.3, Intel Iris Pro) closed by
- nonchimerax: Apple graphics driver crash on very old Mac laptop. Only Apple can …
- 9:59 AM Ticket #6339 (Failure creating downloads directory: No such file or directory) closed by
- wontfix: This user must have deleted their Downloads directory. This is so …
- 9:26 AM Ticket #6340 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 9:22 AM Ticket #6338 (Crash getting Structure._graphics_changeds attribute after selection ...) closed by
- can't reproduce
- 8:48 AM Ticket #6342 (Crash registering webcam command during session save) created by
- […]
- 4:34 AM Ticket #6341 (Graphics crash, macOS 11.6.3, Intel Iris Pro) created by
- […]
- 4:10 AM Ticket #6340 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 1:36 AM Ticket #6339 (Failure creating downloads directory: No such file or directory) created by
- […]
- 1:10 AM Ticket #6338 (Crash getting Structure._graphics_changeds attribute after selection ...) created by
- […]
Mar 8, 2022:
- 6:20 PM Ticket #6337 (Try newer RealSense depth cameras for mixed reality video capture) created by
- Begin forwarded message: From: Tom Goddard Subject: ChimeraX mixed …
- 5:34 PM Ticket #6336 (RealSense camera view clips VR gui elements) created by
- […]
- 4:39 PM Ticket #6335 (Toolshed install of bundles broken with Qt 6) created by
- […]
- 4:26 PM Ticket #6334 (Say Windows 11 supported on Download page) created by
- We should say that ChimeraX is supported on Windows 11 on the download …
- 2:09 PM Ticket #6333 (Show AlphaFold predicted aligned error (PAE) for selected residues) created by
- […] P0C7U0_questionable_interface.cxs
- 1:17 PM Ticket #6332 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 1:15 PM Ticket #6331 (Unknown crash) closed by
- can't reproduce
- 1:09 PM Ticket #6329 (Saving command history: No space left on device) closed by
- nonchimerax
- 1:04 PM Ticket #6327 (Crash showing Rapid Access at startup) closed by
- can't reproduce
- 1:00 PM Ticket #6326 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 10:24 AM 2022-3-10 created by
- 10:23 AM DeveloperMeetings edited by
- (diff)
- 8:58 AM Ticket #6332 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 7:22 AM Ticket #6331 (Unknown crash) created by
- […]
- 4:25 AM Ticket #6330 (KeyError handling Blast results) created by
- […]
- 3:41 AM Ticket #6329 (Saving command history: No space left on device) created by
- […]
- 2:00 AM Ticket #6328 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 1:11 AM Ticket #6327 (Crash showing Rapid Access at startup) created by
- […]
Mar 7, 2022:
- 1:13 PM Ticket #6326 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 11:54 AM Ticket #6085 (No QAbstractVideoSurface in Qt6) closed by
- fixed: Fixed. Made webcam command work with Qt6. Qt 6 greatly changed the …
- 11:45 AM Ticket #6323 (Crashed on quit using webcam command with Qt6) closed by
- fixed: Fixed. ChimeraX Python code was not holding references to the …
- 11:41 AM Ticket #6325 (Crash on exit after webcam off command deleting QMediaCaptureSession ...) closed by
- fixed: Fixed. Apparently if the QCamera is deleted by "webcam off" and later …
- 10:53 AM Ticket #6324 (Matchmaker: 'NoneType' object has no attribute 'setChecked') closed by
- duplicate: Duplicate of #5207
- 10:46 AM Ticket #6325 (Crash on exit after webcam off command deleting QMediaCaptureSession ...) created by
- […]
- 10:44 AM Ticket #6324 (Matchmaker: 'NoneType' object has no attribute 'setChecked') created by
- […]
- 10:36 AM Ticket #6323 (Crashed on quit using webcam command with Qt6) created by
- […]
- 10:28 AM Ticket #6211 (Problem querying for new version: 'DefaultApi' object has no attribute ...) closed by
- duplicate: Should be fixed in any build from after 01/24
- 10:06 AM Ticket #6314 (Error while fetching from AlphaFold database) closed by
- fixed: Switched the default version on the backend from 2 to 1 and ran those …
- 9:55 AM Ticket #6319 (Crash saving .cmap file) closed by
- can't reproduce: PyTables crashes saving hdf5 file (*.cmap) on this user's Ubuntu 18.04 …
- 9:46 AM Ticket #6322 (Bad pseudobond / group attributes) closed by
- can't reproduce: Would need the alternative_cox_position.cxs session file to have any …
- 9:23 AM Ticket #6321 (Crash saving .cmap file) closed by
- duplicate
- 9:22 AM Ticket #6320 (Crash saving .cmap file) closed by
- duplicate
- 4:51 AM Ticket #6322 (Bad pseudobond / group attributes) created by
- […]
- 3:41 AM Ticket #6321 (Crash saving .cmap file) created by
- […]
- 3:40 AM Ticket #6320 (Crash saving .cmap file) created by
- […]
- 3:38 AM Ticket #6319 (Crash saving .cmap file) created by
- […]
Mar 6, 2022:
Mar 5, 2022:
Mar 4, 2022:
- 6:06 PM Ticket #6305 (VR hands and gui clipped by scene clip planes) closed by
- fixed: Fixed. In the past I made depth cue not apply to the VR gui elements. …
- 2:35 PM Ticket #6316 (Crash drawin silhouettes) closed by
- nonchimerax: OpenGL driver crash. Not surprising with a 13 year old graphics card …
- 2:24 PM Ticket #6312 (ColabFold-MMSEQs2 notebook much faster than AlphaFold2 notebook) closed by
- fixed: Yeah, I have wanted to try mmseq2 with AlphaFold for about 3 months …
- 2:20 PM Ticket #6310 (Unknown problem) closed by
- duplicate: Steven was just providing machine info for the faulty silhouette edge …
- 11:27 AM Ticket #6311 (Crash computing secondary structure) closed by
- fixed: Hi Drew, Thanks for reporting this problem. I have applied a fix and …
- 10:23 AM Ticket #6315 (Crash computing secondary structure) closed by
- duplicate: Duplicate of #6311
- 9:34 AM Ticket #6313 (atom_search_lib missing) closed by
- fixed: Yes, as you noted, fixed. It was broken for one day. There are other …
- 9:18 AM Ticket #6309 (Long atom spec crashes ChimeraX) closed by
- duplicate
- 8:04 AM Ticket #6316 (Crash drawin silhouettes) created by
- […]
- 7:40 AM Ticket #6315 (Crash computing secondary structure) created by
- […]
- 6:59 AM Ticket #6314 (Error while fetching from AlphaFold database) created by
- […]
- 4:19 AM Ticket #6313 (atom_search_lib missing) created by
- […]
- 3:43 AM Ticket #6312 (ColabFold-MMSEQs2 notebook much faster than AlphaFold2 notebook) created by
- […]
- 2:07 AM Ticket #6311 (Crash computing secondary structure) created by
- […] 2lby.pdb
Mar 3, 2022:
- 11:24 PM Ticket #6310 (Unknown problem) created by
- […]
- 7:05 PM Ticket #6308 (traceback using "measure center" on map model that hasn't been shown ...) closed by
- fixed: Fixed. Made measure center command use all voxels if volume has no …
- 6:51 PM Ticket #6309 (Long atom spec crashes ChimeraX) created by
- […]
- 6:40 PM Ticket #6308 (traceback using "measure center" on map model that hasn't been shown ...) created by
- For example, use measure center #1 after opening the DICOM folder …
- 6:37 PM Ticket #6307 (Vive Tracker for RealSense camera not aligned with Oculus headsets) created by
- Doing mixed reality video capture with VR and a RealSense depth …
- 5:43 PM Ticket #6306 (Crash finding clashing atoms) created by
- […]
- 4:51 PM Ticket #6305 (VR hands and gui clipped by scene clip planes) created by
- […]
- 4:39 PM Ticket #6266 ('cd' as command vs. menu) closed by
- can't reproduce: Hi Fred, I guess we'll chalk this one up to cosmic rays. :-). Thanks …
- 4:21 PM Ticket #6300 (Region not in region_browser.sequence_regions) closed by
- fixed: Hi Alvin, Thanks for reporting this problem. Though it doesn't help …
- 4:03 PM Ticket #6302 (Crash in GL.glDrawElementsInstanced) closed by
- can't reproduce: Crash calling GL.glDrawElementsInstanced(element_type, ne, …
- 3:59 PM Ticket #6301 (Rendering on macOS Monterey) closed by
- nonchimerax: This is a problem in Apple's graphics driver. I have only seen it on …
- 3:54 PM Ticket #6296 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Hoping this Qt bug is fixed in Qt 6. So far not seen in Qt 6.
- 2:17 PM NTTData edited by
- (diff)
- 2:15 PM NTTData edited by
- (diff)
- 2:13 PM NTTData edited by
- (diff)
- 1:54 PM NTTData edited by
- (diff)
- 1:51 PM NTTData edited by
- (diff)
- 1:49 PM NTTData edited by
- (diff)
- 12:10 PM 2022-3-3 edited by
- (diff)
- 12:08 PM Ticket #6298 (Crash in event loop after matchmaker) closed by
- can't reproduce
- 11:28 AM Ticket #5985 (Download page Ubuntu install command is wrong) closed by
- fixed: Name now matches.
- 11:26 AM Ticket #6304 (Various errors) created by
- […]
- 11:25 AM Dev2022-3-10 created by
- 11:22 AM DeveloperMeetings edited by
- (diff)
- 11:18 AM Ticket #6303 (Help viewer context menu not working in Qt6) created by
- […]
- 11:06 AM 2022-3-3 created by
- 11:06 AM DeveloperMeetings edited by
- (diff)
- 10:57 AM Ticket #6294 (Signal callback crash) closed by
- can't reproduce
- 8:46 AM Ticket #6302 (Crash in GL.glDrawElementsInstanced) created by
- […]
- 6:35 AM Ticket #6301 (Rendering on macOS Monterey) created by
- […] [[Image(...)]]
- 3:49 AM Ticket #6300 (Region not in region_browser.sequence_regions) created by
- […]
- 3:48 AM Ticket #6299 (Region not in region_browser.sequence_regions) created by
- […]
Mar 2, 2022:
- 9:20 PM Ticket #6298 (Crash in event loop after matchmaker) created by
- […]
- 6:23 PM Ticket #4759 (dssp unexpectedly slow) closed by
- fixed: Reduced 6r83 from 30 seconds to 2.8 seconds and 4yd9 from 20 seconds …
- 4:44 PM Training edited by
- (diff)
- 4:37 PM Ticket #5964 (Optimizing ISOLDE map zoning using JAX) closed by
- fixed: Fixed. Improved the mesh edge performance, about 6x faster, tickets …
- 4:32 PM Ticket #6243 (Mesh calculation from triangles very slow) closed by
- fixed: Fixed. The masked edges calculation now uses C++ vector, sort, and …
- 4:30 PM Ticket #6297 (Graphics is computing mesh edges for surface twice) closed by
- fixed: Fixed. I made the selection highlight reuse the mesh edges from the …
- 4:28 PM Ticket #6297 (Graphics is computing mesh edges for surface twice) created by
- The graphics code computes the mesh edges for a triangulated surface …
- 4:23 PM Ticket #6279 (Reading *.cmap file: No module named 'chimera') closed by
- fixed: Fixed. Reading .cmap file failed if it had a non-zero rotation angle …
- 3:40 PM Ticket #6274 (Graphics crash, macOS 10.15.7, AMD Radeon Pro 580X) closed by
- nonchimerax: Apple graphics driver crash. Was drawing Qt user interface, not …
- 3:40 PM Ticket #6296 (Crash showing Rapid Access at startup) created by
- […]
- 3:33 PM Ticket #6265 (Problem restoring clip caps when volume surface not restored) closed by
- fixed: Fixed. Restoring a session where a volume file was not found and not …
- 3:17 PM Ticket #6264 (Crash in event loop after or while clearing selection) closed by
- can't reproduce: No clues.
- 3:09 PM Ticket #6259 (Permission denied saving image to desktop (and other errors)) closed by
- duplicate: There are 3 ChimeraX errors in this report. First ChimeraX crashed. …
- 2:18 PM Ticket #6295 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 2:06 PM Ticket #6294 (Signal callback crash) created by
- […]
- 1:11 PM Ticket #6293 (Errors checking for new versions) closed by
- duplicate
- 1:10 PM Ticket #6292 (Errors checking for new versions) closed by
- duplicate
- 11:29 AM Ticket #6290 (Crash in QOpenGLContext.makeCurrent()) closed by
- can't reproduce: Crashed in making the opengl context current during a window resize …
- 11:26 AM Ticket #6293 (Errors checking for new versions) created by
- […]
- 11:07 AM Ticket #6292 (Errors checking for new versions) created by
- […]
- 9:26 AM Ticket #6291 (Crash using color editor) closed by
- can't reproduce
- 9:18 AM Ticket #6289 (Crash in event loop) closed by
- can't reproduce
- 9:18 AM Ticket #6288 (Errors checking for new versions) closed by
- duplicate
- 9:16 AM Ticket #6287 (Crash in event loop) closed by
- can't reproduce
- 9:13 AM Ticket #6285 (Unknown crash) closed by
- can't reproduce
- 8:27 AM Ticket #6291 (Crash using color editor) created by
- […]
- 7:10 AM Ticket #6290 (Crash in QOpenGLContext.makeCurrent()) created by
- […]
- 6:57 AM Ticket #6289 (Crash in event loop) created by
- […]
- 6:23 AM Ticket #6288 (Errors checking for new versions) created by
- […]
- 2:24 AM Ticket #6287 (Crash in event loop) created by
- […]
- 1:22 AM Ticket #6286 (Give a good error message if RBVI resources unavailable) created by
- […]
Mar 1, 2022:
- 7:56 PM Ticket #6281 (Cannot show tomogram as surface or volume) closed by
- not a bug: The error message means the file was not readable. OSError: [Errno 5] …
- 7:51 PM Ticket #6282 (3D stereo not correct.) closed by
- not a bug: The eye separation is specified by the camera command options …
- 7:16 PM Ticket #6285 (Unknown crash) created by
- […]
- 7:07 PM Ticket #6284 (Errors checking for new versions) created by
- […]
- 2:39 PM Ticket #6280 (Traceback fetching available ChimeraX versions) closed by
- duplicate: Hi Kenneth, Thanks for reporting this problem. You can safely ignore …
- 2:13 PM Ticket #6283 (phi-psi in isolde does not show current selection.) created by
- […] restrict-current-sel.png
- 1:57 PM Ticket #6282 (3D stereo not correct.) created by
- […] 3d-stereo-chimerax-isolde.png
- 1:57 PM Ticket #6281 (Cannot show tomogram as surface or volume) created by
- […]
- 1:31 PM Ticket #6280 (Traceback fetching available ChimeraX versions) created by
- […]
- 11:00 AM Ticket #6279 (Reading *.cmap file: No module named 'chimera') created by
- […]
- 10:15 AM Ticket #6273 (Infinite recursion drawing alignment) closed by
- can't reproduce
- 10:14 AM Ticket #6278 (Isolde will not install.) created by
- […] isolde-stuck.png
- 9:58 AM Ticket #6267 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 9:33 AM Ticket #6262 (Crash using File→Open on Windows and/or in show_surface_clip_caps()) closed by
- can't reproduce
- 9:31 AM Ticket #6261 (Crash using File→Open on Windows) closed by
- can't reproduce
- 9:30 AM Ticket #6258 (ISOLDE: KeyError in find_glycan_template_name_and_link) closed by
- fixed: Ancient version of ISOLDE. Traceback is long-since fixed (problem is …
- 9:27 AM Ticket #6260 (Can't destroy status bar) closed by
- duplicate
- 9:16 AM Ticket #6257 (Crash in event loop after downloading new SEQCROW) closed by
- can't reproduce
- 9:14 AM Ticket #6256 (Crash in swap_buffers) closed by
- can't reproduce: Hi Sid, This is either a problem with your graphics driver or with …
- 8:46 AM Ticket #6277 (Can't get to isolde under tools.) created by
- […]
- 7:08 AM Ticket #6276 (Errors getting available bundles list) created by
- […]
- 5:57 AM Ticket #6275 (Errors getting available bundles list) created by
- […]
- 5:50 AM Ticket #6274 (Graphics crash, macOS 10.15.7, AMD Radeon Pro 580X) created by
- […]
- 3:57 AM Ticket #6273 (Infinite recursion drawing alignment) created by
- […]
Feb 28, 2022:
- 9:06 PM Ticket #6272 (Errors getting available bundles list) created by
- […]
- 6:40 PM Ticket #6271 (in techpreview Help Viewer (browser), trying to copy text gives traceback) created by
- trying to copy text from ChimeraX browser by highlighting it and using …
- 6:38 PM Ticket #6270 (in techpreview, trying to get context menu in ChimeraX help viewer ...) created by
- Ctrl-click in main body of ChimeraX help viewer (browser) window which …
- 6:33 PM Ticket #6269 (trying to use Report a Bug when our system is down gives traceback) created by
- Failed to send bug report. Error while sending follows: Traceback …
- 3:45 PM Ticket #6268 (Release PyQt6 to the daily builds) created by
- This is (for the most part) a bookkeeping ticket to track what other …
- 8:48 AM Ticket #6267 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 7:32 AM Ticket #6266 ('cd' as command vs. menu) created by
- […]
- 6:12 AM Ticket #6265 (Problem restoring clip caps when volume surface not restored) created by
- […]
- 1:33 AM Ticket #6264 (Crash in event loop after or while clearing selection) created by
- […]
Feb 27, 2022:
- 9:52 PM Ticket #6263 (Molecular Dynamics Viewer: Values array length does not match objects ...) created by
- […]
- 1:07 PM Ticket #6262 (Crash using File→Open on Windows and/or in show_surface_clip_caps()) created by
- […]
- 8:33 AM Ticket #6261 (Crash using File→Open on Windows) created by
- […]
Feb 26, 2022:
- 6:20 PM Ticket #6260 (Can't destroy status bar) created by
- […]
- 9:09 AM Ticket #6259 (Permission denied saving image to desktop (and other errors)) created by
- […] å±å¹æªåŸ(376).png
- 6:13 AM Ticket #6258 (ISOLDE: KeyError in find_glycan_template_name_and_link) created by
- […]
- 12:35 AM Ticket #6257 (Crash in event loop after downloading new SEQCROW) created by
- […]
Feb 25, 2022:
- 6:55 PM Ticket #6256 (Crash in swap_buffers) created by
- […]
- 6:02 PM Ticket #6255 (Make DICOM reader read time series from 2D images) created by
- Jason Rubenstein asked about displaying a DICOM time series consisting …
- 5:00 PM Ticket #5143 (Avoid recalculating idatm_types for entire model after changes?) closed by
- wontfix: After further reflection, the simple Residue dirty bit I was …
- 4:29 PM Ticket #6254 (opening 1plx as trajectory (coordset true) omits inter-residue bonds) closed by
- duplicate: Duplicate of #6253
- 4:27 PM Ticket #6254 (opening 1plx as trajectory (coordset true) omits inter-residue bonds) created by
- […]
- 4:25 PM Ticket #6252 (perframe surface zone keeps showing whole surface) closed by
- limitation: Ok, this isn't pretty but here are some solutions. The problem is …
- 3:28 PM Ticket #6246 (Crash running AlphaFold prediction) closed by
- can't reproduce: Probably a crash in the Qt html panel. No info to help debug it.
- 3:26 PM Ticket #6253 (opening 1plx as trajectory (coordset true) omits inter-residue bonds) created by
- This is a short peptide NMR ensemble. If I open the regular way the …
- 3:16 PM Ticket #6252 (perframe surface zone keeps showing whole surface) created by
- From: "Lewandowski, Jozef" <J.R.Lewandowski@…> via …
- 2:51 PM Ticket #6251 (Crash in Qt on exit) closed by
- nonchimerax: Ok. The crash report is ChimeraX crashing when you were quitting it …
- 1:37 PM Ticket #6250 (Crash in event loop) closed by
- can't reproduce: Possibly while doing something with rotamers
- 1:23 PM Ticket #6249 (Crash opening BILD file) closed by
- can't reproduce
- 1:14 PM Ticket #6251 (Crash in Qt on exit) created by
- […]
- 1:04 PM Ticket #6250 (Crash in event loop) created by
- […]
- 11:58 AM Ticket #6249 (Crash opening BILD file) created by
- […]
- 11:53 AM Ticket #6248 (Qt6 problems) created by
- […]
- 11:30 AM Ticket #6244 (ViewdockX after rows deleted: KeyError: 'stars') closed by
- fixed: Fixed in tomorrow's daily build
- 10:11 AM Ticket #6242 (wrapped C/C++ object of type QScreen has been deleted) closed by
- duplicate
- 9:16 AM Ticket #6228 (Surface values not reported) closed by
- nonchimerax: Reporter replied that status line messages giving chain info do not …
- 4:44 AM Ticket #6247 (CGSGetSurfaceBinding failed) created by
- […]
- 2:25 AM Ticket #6246 (Crash running AlphaFold prediction) created by
- […]
- 12:06 AM Ticket #6112 (No vseries help) closed by
- fixed
- 12:02 AM Ticket #6158 (Open BILD file: float division by zero) closed by
- fixed: No response. Assume the fix worked.
Feb 24, 2022:
- 11:01 PM Ticket #6245 (ISOLDE _show_selected_clash: 'residues' is empty) created by
- […]
- 9:57 PM Ticket #6244 (ViewdockX after rows deleted: KeyError: 'stars') created by
- […]
- 7:27 PM Ticket #6192 (Segger fit dialog tried to save a closed volume model in a session) closed by
- fixed: Fixed. Fixed session save when segmented map deleted. But Segger is …
- 6:24 PM Ticket #6233 ("camera stereo" interferes with up-arrow selection) closed by
- fixed: Fixed. Switching camera mode to stereo made a new graphics window …
- 6:13 PM Ticket #6171 (camera stereo: 'NoneType' object has no attribute 'opengl_buffer) closed by
- fixed: Fixed. Added check to make sure OpenGL code does not try to set …
- 6:12 PM Ticket #6171 (camera stereo: 'NoneType' object has no attribute 'opengl_buffer) reopened by
- 6:06 PM Ticket #6186 (ghosting of left eye on 3D stereo of a selected atom.) closed by
- fixed: Fixed. Made opengl code use correct glDrawMode() in stereo and when …
- 4:50 PM Ticket #6243 (Mesh calculation from triangles very slow) created by
- As indicated in comments in ticket #5964 computing mesh edges from …
- 3:05 PM Ticket #6242 (wrapped C/C++ object of type QScreen has been deleted) created by
- […]
- 2:59 PM Ticket #6239 (graphics out of memory) closed by
- nonchimerax: The OpenGL out of memory errors doing operations that should not use …
- 2:54 PM Ticket #6235 (Can save movie but not image to desktop) closed by
- nonchimerax: Is the file image1.png already on your Desktop? Maybe ChimeraX does …
- 2:04 PM Dev2022-2-24 edited by
- (diff)
- 2:03 PM 2022-2-24 edited by
- (diff)
- 10:05 AM Ticket #6230 (Crash in QOpenGLFunctions::initializeOpenGLFunctions()) closed by
- can't reproduce
- 10:03 AM Ticket #6229 (Crash using File→Open on Windows and/or in show_surface_clip_caps()) closed by
- can't reproduce
- 9:58 AM Ticket #6241 (Crash in return statement) closed by
- can't reproduce
- 9:58 AM Ticket #6241 (Crash in return statement) created by
- The following bug report has been submitted: Platform: …
- 9:55 AM Ticket #6240 (OpenMM runtime error: Release Object) created by
- The following bug report has been submitted: Platform: …
- 9:23 AM Ticket #6239 (graphics out of memory) created by
- The following bug report has been submitted: Platform: …
- 9:19 AM Ticket #6238 (Crash in event loop, possibly due to bad graphics) closed by
- can't reproduce
- 9:19 AM Ticket #6238 (Crash in event loop, possibly due to bad graphics) created by
- The following bug report has been submitted: Platform: …
- 9:15 AM Ticket #6237 (Problem switching GPU) created by
- The following bug report has been submitted: Platform: …
- 9:12 AM Ticket #6236 (Bundle already installed produces traceback) created by
- The following bug report has been submitted: Platform: …
- 9:07 AM Ticket #6235 (Can save movie but not image to desktop) created by
- The following bug report has been submitted: Platform: …
- 9:02 AM Ticket #6234 (Cannot save session including volumes bigger than 4 Gbytes) created by
- The following bug report has been submitted: Platform: …
- 8:56 AM Ticket #6233 ("camera stereo" interferes with up-arrow selection) created by
- The following bug report has been submitted: Platform: …
- 8:53 AM Ticket #6232 (Toolshed install button blank) created by
- The following bug report has been submitted: Platform: …
- 3:00 AM Ticket #6230 (Crash in QOpenGLFunctions::initializeOpenGLFunctions()) created by
- […]
Feb 23, 2022:
- 9:45 PM Ticket #6086 (VR menus broken with Qt 6) closed by
- fixed: Fixed. Qt6 QMouseEvent constructors require a local widget position …
- 7:14 PM Ticket #6229 (Crash using File→Open on Windows and/or in show_surface_clip_caps()) created by
- […]
- 7:09 PM Ticket #6228 (Surface values not reported) created by
- The following bug report has been submitted: Platform: …
- 6:57 PM Ticket #6193 (Volume contour mouse mode broken when outline box shown) closed by
- fixed: Fixed. Code for picking volume under mouse found outline box instead.
- 6:01 PM Dev2022-2-24 edited by
- (diff)
- 5:54 PM Ticket #6184 (color byattribute failure) closed by
- fixed: If the conservation header is set to show Clustal characters, it now …
- 9:54 AM Ticket #6227 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 6:46 AM Ticket #6219 (Clipper: Floating point exception) closed by
- fixed: Fixed. When deciding on the grid spacing for each cell dimension, …
- 12:32 AM Ticket #5854 (Crash creating QWebEngineProfile) closed by
- can't reproduce: We have a Qt 6 techpreview ChimeraX build on the download page and so …
- 12:29 AM Ticket #5876 (Crash recording spin movie) closed by
- can't reproduce: No info about what caused this crash while recording a spin movie.
- 12:25 AM Ticket #5947 (Crash in GL.glUniform1f) closed by
- can't reproduce: No response from reporter.
- 12:23 AM Ticket #6084 (Log fails to start: cannot import name 'ChimeraXHtmlView' from ...) closed by
- fixed: Fixed in Qt 6. Won't try to work around this in Qt 5.
- 12:16 AM Ticket #6195 (Attempt to retrieve context when no valid context) closed by
- can't reproduce
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