![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#6251 closed defect (nonchimerax)
Crash in Qt on exit
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Eric Pettersen | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.3.dev202108250654 (2021-08-25 06:54:03 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [58657]
Path: /Users/USER/Desktop/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.3.0 (1.3.0.0)
Code Type: X86-64 (Native)
Parent Process: zsh [54478]
Responsible: Terminal [943]
User ID: 501
Date/Time: 2022-02-25 16:13:21.057 -0500
OS Version: macOS 11.3 (20E232)
Report Version: 12
Anonymous UUID: D545D103-2AE3-3481-427B-F40CF436DC2F
Time Awake Since Boot: 190000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: EXC_I386_GPFLT
Exception Note: EXC_CORPSE_NOTIFY
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff205e8946 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff20617615 pthread_kill + 263
2 libsystem_c.dylib 0x00007fff204fbbe5 raise + 26
3 libsystem_platform.dylib 0x00007fff2065cd7d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 sip.cpython-39-darwin.so 0x00000001067d4b99 sip_api_visit_wrappers + 105
6 QtCore.abi3.so 0x0000000105f3728c cleanup_on_exit(_object*, _object*) + 12
7 org.python.python 0x00000001048c8a8a cfunction_vectorcall_NOARGS + 282
8 org.python.python 0x0000000104a02931 atexit_callfuncs + 113
9 org.python.python 0x00000001049a632e Py_FinalizeEx + 78
10 org.python.python 0x00000001049c8860 Py_RunMain + 2240
11 org.python.python 0x00000001049c8b3f pymain_main + 223
12 org.python.python 0x00000001049c8a4b Py_Main + 43
13 edu.ucsf.cgl.ChimeraX 0x0000000104842dc8 main + 120
14 libdyld.dylib 0x00007fff20632f3d start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff205e4d4e __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20617ea1 _pthread_cond_wait + 1298
2 libopenblas.0.dylib 0x000000010713521f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 2:
0 libsystem_kernel.dylib 0x00007fff205e4d4e __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20617ea1 _pthread_cond_wait + 1298
2 libopenblas.0.dylib 0x000000010713521f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 3:
0 libsystem_kernel.dylib 0x00007fff205e4d4e __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20617ea1 _pthread_cond_wait + 1298
2 libopenblas.0.dylib 0x000000010713521f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 4:
0 libsystem_pthread.dylib 0x00007fff20613484 start_wqthread + 0
Thread 5:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff205eb1ea kevent64 + 10
1 QtWebEngineCore 0x000000011ab38e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011ab38cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011aac162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011aa857cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011aacca94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x000000011aae0a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 6:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011aad6778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011aad7150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011aad6cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 7:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011aad6778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011aad6e3d base::internal::WorkerThread::RunWorker() + 237
5 QtWebEngineCore 0x000000011aad6c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 8:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff205eb1ea kevent64 + 10
1 QtWebEngineCore 0x000000011ab38e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011ab38cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011aac162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011aa857cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011ea05f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x000000011aae0a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ab2e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011aa561db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011aac162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011aa857cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011aae0a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 10:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011aad6778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011aad7150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011aad6cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 11:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011aad6778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011aad7150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011aad6cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 12:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011aad6778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011aad7150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011aad6cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 13:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff205e4d4e __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20617ea1 _pthread_cond_wait + 1298
2 QtWebEngineCore 0x000000011ab25e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x000000011bddd5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
6 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 14:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011aa5620f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x000000011aac162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x000000011aa857cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x000000011aae0a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 15:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff205eb1ea kevent64 + 10
1 QtWebEngineCore 0x000000011ab38e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011ab38cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011aac162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011aa857cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011aae0a7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 16:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ab2e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011aa561db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011aac162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011aa857cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011aae0a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 17:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ab2e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011aa561db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011aac162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011aa857cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011aae0a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 18:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ab2e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011aad676a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x000000011aad7150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x000000011aad6d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 19:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ab2e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011aa561db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011aac162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011aa857cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011aae0a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 20:: Thread (pooled)
0 libsystem_kernel.dylib 0x00007fff205e4d4e __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20617ea1 _pthread_cond_wait + 1298
2 QtCore 0x000000010611faaf QWaitConditionPrivate::wait_relative(QDeadlineTimer) + 303
3 QtCore 0x000000010611f77e QWaitConditionPrivate::wait(QDeadlineTimer) + 94
4 QtCore 0x000000010611f69d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
5 QtCore 0x000000010611bccd QThreadPoolThread::run() + 605
6 QtCore 0x0000000106117619 QThreadPrivate::start(void*) + 329
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 21:: Thread (pooled)
0 libsystem_kernel.dylib 0x00007fff205e4d4e __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20617ea1 _pthread_cond_wait + 1298
2 QtCore 0x000000010611faaf QWaitConditionPrivate::wait_relative(QDeadlineTimer) + 303
3 QtCore 0x000000010611f77e QWaitConditionPrivate::wait(QDeadlineTimer) + 94
4 QtCore 0x000000010611f69d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
5 QtCore 0x000000010611bccd QThreadPoolThread::run() + 605
6 QtCore 0x0000000106117619 QThreadPrivate::start(void*) + 329
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 22:: Thread (pooled)
0 libsystem_kernel.dylib 0x00007fff205e4d4e __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20617ea1 _pthread_cond_wait + 1298
2 QtCore 0x000000010611faaf QWaitConditionPrivate::wait_relative(QDeadlineTimer) + 303
3 QtCore 0x000000010611f77e QWaitConditionPrivate::wait(QDeadlineTimer) + 94
4 QtCore 0x000000010611f69d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
5 QtCore 0x000000010611bccd QThreadPoolThread::run() + 605
6 QtCore 0x0000000106117619 QThreadPrivate::start(void*) + 329
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 23:: Thread (pooled)
0 libsystem_kernel.dylib 0x00007fff205e4d4e __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20617ea1 _pthread_cond_wait + 1298
2 QtCore 0x000000010611faaf QWaitConditionPrivate::wait_relative(QDeadlineTimer) + 303
3 QtCore 0x000000010611f77e QWaitConditionPrivate::wait(QDeadlineTimer) + 94
4 QtCore 0x000000010611f69d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
5 QtCore 0x000000010611bccd QThreadPoolThread::run() + 605
6 QtCore 0x0000000106117619 QThreadPrivate::start(void*) + 329
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 24:
0 libsystem_pthread.dylib 0x00007fff20613484 start_wqthread + 0
Thread 25:
0 libsystem_pthread.dylib 0x00007fff20613484 start_wqthread + 0
Thread 26:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff20710c6f __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff2070f34f __CFRunLoopRun + 1328
4 com.apple.CoreFoundation 0x00007fff2070e75c CFRunLoopRunSpecific + 563
5 com.apple.AppKit 0x00007fff23090baa _NSEventThread + 124
6 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 27:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ab2e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011aad676a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x000000011aad6e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x000000011aad6c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 28:
0 libsystem_pthread.dylib 0x00007fff20613484 start_wqthread + 0
Thread 29:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011aad6778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011aad7150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011aad6cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 30:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff205e232a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff205e269c mach_msg + 60
2 QtWebEngineCore 0x000000011ab2e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011aad6778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011aad6e3d base::internal::WorkerThread::RunWorker() + 237
5 QtWebEngineCore 0x000000011aad6cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011ab29e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff20617954 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff206134a7 thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000106dbee00 rcx: 0x00007fcc68055a58 rdx: 0x0000000000000000
rdi: 0x0000000000000103 rsi: 0x000000000000000b rbp: 0x00007fcc68055a80 rsp: 0x00007fcc68055a58
r8: 0x00007fcc68055f48 r9: 0xc394585caa4bbe5f r10: 0x0000000106dbee00 r11: 0x0000000000000246
r12: 0x0000000000000103 r13: 0x000000000000015e r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff205e8946 rfl: 0x0000000000000246 cr2: 0x00007fcc68055f48
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Thread 0 instruction stream:
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0x7fff36556000 - 0x7fff3655dfff com.apple.ImageCapture (1711.4.2 - 1711.4.2) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/ImageCapture.framework/Versions/A/ImageCapture
0x7fff3655e000 - 0x7fff3774afff com.apple.JavaScriptCore (16611 - 16611.1.21.161.3) /System/Library/Frameworks/JavaScriptCore.framework/Versions/A/JavaScriptCore
0x7fff377b6000 - 0x7fff378c8fff com.apple.AVFCapture (1.0 - 81.37) /System/Library/PrivateFrameworks/AVFCapture.framework/Versions/A/AVFCapture
0x7fff378c9000 - 0x7fff3795cfff com.apple.Quagga (47 - 47) /System/Library/PrivateFrameworks/Quagga.framework/Versions/A/Quagga
0x7fff3795d000 - 0x7fff37ba7fff com.apple.CMCapture (1.0 - 81.37) /System/Library/PrivateFrameworks/CMCapture.framework/Versions/A/CMCapture
0x7fff385a3000 - 0x7fff385b2fff com.apple.HID (1.0 - 1) /System/Library/PrivateFrameworks/HID.framework/Versions/A/HID
0x7fff385b3000 - 0x7fff386dafff com.apple.QuickLookUIFramework (5.0 - 928.3) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuickLookUI.framework/Versions/A/QuickLookUI
0x7fff38b8b000 - 0x7fff38bcafff com.apple.MediaServices (1.0 - 1) /System/Library/PrivateFrameworks/MediaServices.framework/Versions/A/MediaServices
0x7fff38cc2000 - 0x7fff38cc2fff com.apple.marco (10.0 - 1000) /System/Library/PrivateFrameworks/Marco.framework/Versions/A/Marco
0x7fff39376000 - 0x7fff3937dfff com.apple.URLFormatting (146 - 146.22) /System/Library/PrivateFrameworks/URLFormatting.framework/Versions/A/URLFormatting
0x7fff3bdd0000 - 0x7fff3bdf2fff com.apple.quicklook.QuickLookSupport (1.0 - 135.4) /System/Library/PrivateFrameworks/QuickLookSupport.framework/Versions/A/QuickLookSupport
0x7fff3bdf3000 - 0x7fff3be8afff com.apple.AirPlaySync (1.0 - 2770.32.4.7) /System/Library/PrivateFrameworks/AirPlaySync.framework/Versions/A/AirPlaySync
0x7fff3ca1a000 - 0x7fff3ca9dfff com.apple.CorePDF (4.0 - 529) /System/Library/PrivateFrameworks/CorePDF.framework/Versions/A/CorePDF
0x7fff3ca9e000 - 0x7fff3caa1fff com.apple.print.framework.Print (15 - 271) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x7fff3caa2000 - 0x7fff3caa5fff com.apple.Carbon (160 - 164) /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
0x7fff3cb9e000 - 0x7fff3cb9efff com.apple.avfoundation (2.0 - 2010.31) /System/Library/Frameworks/AVFoundation.framework/Versions/A/AVFoundation
0x7fff3cd58000 - 0x7fff3cd77fff com.apple.private.SystemPolicy (1.0 - 1) /System/Library/PrivateFrameworks/SystemPolicy.framework/Versions/A/SystemPolicy
0x7fff3cf1b000 - 0x7fff3cf38fff com.apple.sidecar-core (1.0 - 231) /System/Library/PrivateFrameworks/SidecarCore.framework/Versions/A/SidecarCore
0x7fff3cf39000 - 0x7fff3cf3cfff com.apple.QuickLookNonBaseSystem (1.0 - 1) /System/Library/PrivateFrameworks/QuickLookNonBaseSystem.framework/Versions/A/QuickLookNonBaseSystem
0x7fff3d354000 - 0x7fff3d35afff com.apple.FeatureFlagsSupport (1.0 - 28.60.1) /System/Library/PrivateFrameworks/FeatureFlagsSupport.framework/Versions/A/FeatureFlagsSupport
0x7fff3d4cd000 - 0x7fff3d4e4fff com.apple.SafariServices.framework (16611 - 16611.1.21.161.3) /System/Library/Frameworks/SafariServices.framework/Versions/A/SafariServices
0x7fff3d693000 - 0x7fff3d69efff com.apple.MallocStackLogging (1.0 - 1) /System/Library/PrivateFrameworks/MallocStackLogging.framework/Versions/A/MallocStackLogging
0x7fff3d6b3000 - 0x7fff3d6c5fff libmis.dylib (274.100.13) /usr/lib/libmis.dylib
0x7fff3d6e2000 - 0x7fff3d851fff com.apple.CoreHandwriting (161 - 1.2) /System/Library/PrivateFrameworks/CoreHandwriting.framework/Versions/A/CoreHandwriting
0x7fff3d852000 - 0x7fff3daadfff com.apple.imageKit (3.0 - 1100) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/ImageKit.framework/Versions/A/ImageKit
0x7fff3daae000 - 0x7fff3dbc4fff com.apple.PencilKit (1.0 - 1) /System/Library/Frameworks/PencilKit.framework/Versions/A/PencilKit
0x7fff3dbc5000 - 0x7fff3dbd6fff com.apple.sidecar-ui (1.0 - 231) /System/Library/PrivateFrameworks/SidecarUI.framework/Versions/A/SidecarUI
0x7fff3e1f9000 - 0x7fff3e25bfff com.apple.ImageCaptureCore (1711.4.2 - 1711.4.2) /System/Library/Frameworks/ImageCaptureCore.framework/Versions/A/ImageCaptureCore
0x7fff3e25c000 - 0x7fff3e281fff com.apple.quartzfilters (1.10.0 - 98) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzFilters.framework/Versions/A/QuartzFilters
0x7fff3e4ce000 - 0x7fff3e62dfff com.apple.MediaPlayer (1.0 - 1.0) /System/Library/Frameworks/MediaPlayer.framework/Versions/A/MediaPlayer
0x7fff3e62e000 - 0x7fff3e90cfff com.apple.iTunesCloud (1.0 - 1) /System/Library/PrivateFrameworks/iTunesCloud.framework/Versions/A/iTunesCloud
0x7fff3e938000 - 0x7fff3ea64fff com.apple.AnnotationKit (1.0 - 383.6) /System/Library/PrivateFrameworks/AnnotationKit.framework/Versions/A/AnnotationKit
0x7fff3ea65000 - 0x7fff3ef05fff com.apple.QuartzComposer (5.1 - 383) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzComposer.framework/Versions/A/QuartzComposer
0x7fff3ef06000 - 0x7fff3efeefff com.apple.PDFKit (1.0 - 950.32.1) /System/Library/Frameworks/PDFKit.framework/Versions/A/PDFKit
0x7fff40ed1000 - 0x7fff40edafff com.apple.IOAccelMemoryInfo (1.0 - 1) /System/Library/PrivateFrameworks/IOAccelMemoryInfo.framework/Versions/A/IOAccelMemoryInfo
0x7fff40f35000 - 0x7fff40f38fff com.apple.quartzframework (1.5 - 25) /System/Library/Frameworks/Quartz.framework/Versions/A/Quartz
0x7fff4135d000 - 0x7fff4137bfff libCGInterfaces.dylib (544.4) /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/Libraries/libCGInterfaces.dylib
0x7fff4390a000 - 0x7fff43b7dfff com.apple.RawCamera.bundle (9.10.0 - 1440) /System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera
0x7fff443e6000 - 0x7fff443eafff com.apple.DAAPKit (1.0 - 1) /System/Library/PrivateFrameworks/DAAPKit.framework/Versions/A/DAAPKit
0x7fff45d62000 - 0x7fff45d65fff libpmenergy.dylib (227.100.2) /usr/lib/libpmenergy.dylib
0x7fff4646a000 - 0x7fff46475fff libGPUSupportMercury.dylib (18.5.8) /System/Library/PrivateFrameworks/GPUSupport.framework/Versions/A/Libraries/libGPUSupportMercury.dylib
0x7fff47aa1000 - 0x7fff47ae0fff com.apple.osanalytics.OSAnalytics (1.0 - 1) /System/Library/PrivateFrameworks/OSAnalytics.framework/Versions/A/OSAnalytics
0x7fff4832d000 - 0x7fff48348fff com.apple.network.statistics.framework (1.2 - 1) /System/Library/PrivateFrameworks/NetworkStatistics.framework/Versions/A/NetworkStatistics
0x7fff51719000 - 0x7fff517b8fff com.apple.Symbolication (12.5 - 64544.66.1) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x7fff51984000 - 0x7fff51987fff libpmsample.dylib (227.100.2) /usr/lib/libpmsample.dylib
0x7fff5402d000 - 0x7fff54063fff com.apple.ReplayKit (1.0 - 1) /System/Library/Frameworks/ReplayKit.framework/Versions/A/ReplayKit
0x7fff5565d000 - 0x7fff55660fff com.apple.ForceFeedback (1.0.6 - 1.0.6) /System/Library/Frameworks/ForceFeedback.framework/Versions/A/ForceFeedback
0x7fff5e1ff000 - 0x7fff5ec5afff libSC.dylib (4.4.17.1) /System/Library/Extensions/AMDShared.bundle/Contents/PlugIns/libSC.dylib
0x7fff69726000 - 0x7fff6972afff libmetal_timestamp.dylib (31001.184.2) /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib
0x7fff6bb71000 - 0x7fff6bb77fff libCoreFSCache.dylib (200.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib
0x7fff6bb78000 - 0x7fff6bb7cfff libCoreVMClient.dylib (200.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib
0x7fff6bb7d000 - 0x7fff6bb8cfff com.apple.opengl (18.5.8 - 18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x7fff6bb8d000 - 0x7fff6bb8ffff libCVMSPluginSupport.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x7fff6bb90000 - 0x7fff6bb98fff libGFXShared.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
0x7fff6bb99000 - 0x7fff6bbccfff libGLImage.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x7fff6bbcd000 - 0x7fff6bc09fff libGLU.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
0x7fff6bc0a000 - 0x7fff6bd9dfff libGLProgrammability.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x7fff6bd9e000 - 0x7fff6bda8fff libGL.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x7fff6bda9000 - 0x7fff6bf26fff GLEngine (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine
0x7fff6bf27000 - 0x7fff6bf4ffff GLRendererFloat (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat
0x7fff6d1e8000 - 0x7fff6d240fff com.apple.opencl (4.5 - 4.5) /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x7fff6dd6a000 - 0x7fff6df85fff com.apple.AMDMTLBronzeDriver (4.4.17 - 4.0.4) /System/Library/Extensions/AMDMTLBronzeDriver.bundle/Contents/MacOS/AMDMTLBronzeDriver
0x7fff6e0ee000 - 0x7fff6e13dfff ATIRadeonX4000SCLib.dylib (4.4.17.1) /System/Library/Extensions/AMDRadeonX4000GLDriver.bundle/Contents/MacOS/ATIRadeonX4000SCLib.dylib
0x7fff6e2e6000 - 0x7fff6e2edfff com.apple.agl (3.3.4 - AGL-3.3.3) /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x7fff6e2ee000 - 0x7fff6e3d5fff com.apple.audio.AVFAudio (1.0 - 477.84) /System/Library/Frameworks/AVFAudio.framework/Versions/A/AVFAudio
0x7fff6f953000 - 0x7fff6f965fff com.apple.CMImaging (1.0 - 81.37) /System/Library/PrivateFrameworks/CMImaging.framework/Versions/A/CMImaging
0x7fff73bed000 - 0x7fff73bf8fff com.apple.SymptomAnalytics (1.0 - 1431.100.22) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics
0x7fff73e0e000 - 0x7fff73e26fff com.apple.SymptomPresentationFeed (1.0 - 1431.100.22) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed
0x7fff77992000 - 0x7fff77999fff libRosetta.dylib (203.42) /usr/lib/libRosetta.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)
Writable regions: Total=511.2M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=511.2M(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 128K 1
Activity Tracing 256K 1
CG backing stores 7200K 6
CG image 180K 11
CoreAnimation 72K 9
CoreGraphics 12K 2
CoreUI image data 2976K 23
Dispatch continuations 32.0M 1
Foundation 16K 1
Kernel Alloc Once 8K 1
MALLOC 161.7M 439
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 256K 1 reserved VM address space (unallocated)
Mach message 8K 1
OpenGL GLSL 384K 5
STACK GUARD 120K 30
Stack 158.2M 31
Stack Guard 56.0M 1
VM_ALLOCATE 117.2M 145
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 42.8M 573
__DATA_CONST 21.8M 263
__DATA_DIRTY 1254K 170
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 589.8M 136
__OBJC_RO 70.2M 1
__OBJC_RW 2480K 2
__TEXT 574.3M 554
__UNICODE 588K 1
mapped file 439.3M 58
shared memory 1280K 19
=========== ======= =======
TOTAL 2.3G 2497
TOTAL, minus reserved VM space 2.2G 2497
Log:
UCSF ChimeraX version: 1.3.dev202108250654 (2021-08-25)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open Ava_core.mrc
Opened Ava_core.mrc as #1, grid size 58,64,70, pixel 2.12,2.12,2.12, shown at
level 1.8, step 1, values float32
> open cryosparc_P2_J249_cluster_001.mrc
Opened cryosparc_P2_J249_cluster_001.mrc as #2, grid size 256,256,256, pixel
2.12, shown at level 0.154, step 1, values float32
OpenGL version: 4.1 ATI-4.4.17
OpenGL renderer: AMD Radeon R9 M390 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: iMac
Model Identifier: iMac17,1
Processor Name: Quad-Core Intel Core i5
Processor Speed: 3.2 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 6 MB
Memory: 16 GB
System Firmware Version: 429.100.7.0.0
SMC Version (system): 2.33f12
Software:
System Software Overview:
System Version: macOS 11.3 (20E232)
Kernel Version: Darwin 20.4.0
Time since boot: 2 days 6:40
Graphics/Displays:
AMD Radeon R9 M390:
Chipset Model: AMD Radeon R9 M390
Type: GPU
Bus: PCIe
PCIe Lane Width: x16
VRAM (Total): 2 GB
Vendor: AMD (0x1002)
Device ID: 0x6819
Revision ID: 0x0000
ROM Revision: 113-C408WA-799
VBIOS Version: 113-C408W1-009
EFI Driver Version: 01.00.799
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
iMac:
Display Type: Built-In Retina LCD
Resolution: 5120 x 2880 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Locale: ('en_US', 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.5.30
cftime: 1.5.0
chardet: 4.0.0
charset-normalizer: 2.0.4
ChimeraX-AddCharge: 1.1.4
ChimeraX-AddH: 2.1.10
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.1
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.28.1
ChimeraX-AtomicLibrary: 4.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.3
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.4
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3.dev202108250654
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.4
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.1
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0
ChimeraX-MDcrds: 2.5
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.1
ChimeraX-ModelPanel: 1.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.11.1
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.0.1
cycler: 0.10.0
Cython: 0.29.23
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.4.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.20
imagecodecs: 2021.4.28
imagesize: 1.2.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 2.11.3
jupyter-client: 6.1.12
jupyter-core: 4.7.1
kiwisolver: 1.3.1
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 1.1.1
matplotlib: 3.4.2
matplotlib-inline: 0.1.2
msgpack: 1.0.2
netCDF4: 1.5.6
networkx: 2.6.2
numexpr: 2.7.3
numpy: 1.21.0
numpydoc: 1.1.0
openvr: 1.16.801
packaging: 21.0
ParmEd: 3.2.0
parso: 0.8.2
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 8.2.0
pip: 21.1.1
pkginfo: 1.7.0
prompt-toolkit: 3.0.20
psutil: 5.8.0
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.9.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.2.1
qtconsole: 5.1.0
QtPy: 1.10.0
RandomWords: 0.3.0
requests: 2.25.1
scipy: 1.6.3
setuptools: 57.0.0
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.1.0
sortedcontainers: 2.4.0
Sphinx: 4.0.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.26.6
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.2
wheel-filename: 1.3.0
Change History (3)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash in Qt on exit |
follow-up: 2 comment:2 by , 4 years ago
Hi there, Sorry. I submitted this by mistake. I thought it asked me to register. Please ignore this email. Thanks, Wei On Fri, Feb 25, 2022 at 4:38 PM ChimeraX <ChimeraX-bugs-admin@cgl.ucsf.edu> wrote:
comment:3 by , 4 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
Ok. The crash report is ChimeraX crashing when you were quitting it due to a problem with the Qt window toolkit that ChimeraX uses. It is nothing to worry about, and ChimeraX 1.3 (the current version) does not ask you to report this error since we cannot fix it.
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Reported by Wei Huang