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Opened 4 years ago
Closed 4 years ago
#6422 closed defect (can't reproduce)
Crash using File→Open on Windows
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Platform | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.19043
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: ages\chimerax\toolcode 0x8001010e
Windows fatal exception: code 0x8001010e
barWindows fatal exception: code 0x\__i8001010e
nWindows fatal exception: code 0x8001010eit
__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_providWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: er
File "C:\Prcode 0x8001010eogr
Windows fatal exception: am Ficode 0x8001010e
lWindows fatal exception: code 0x8001010e
eWindows fatal exception: code 0x8001010e
s\ChWindows fatal exception: code 0ximeraX 1.38001010e
\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\PrWindows fatal exception: code 0xogram F8001010e
ilesWindows fatal exception: code 0x8001010e\
CWindows fatal exception: hcode 0x8001010e
imWindows fatal exception: code 0x8001010e
eWindows fatal exception: code 0x8001010e
rWindows fatal exception: code 0x8001010eaX 1.
3\Windows fatal exception: code 0x8001010ebin\lib\run
py.Windows fatal exception: code 0x8001010e
py", line 87 in _run_cWindows fatal exception: code 0xode
File "C:\P8001010e
rogram Windows fatal exception: code 0x8001010e
FWindows fatal exception: code 0x8001010eiles
\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialoWindows fatal exception: code 0x8001010eg.
pWindows fatal exception: code 0xy", line 8001010e135 in show
_oWindows fatal exception: code 0x8001010e
pWindows fatal exception: code 0xen_f8001010e
iWindows fatal exception: code 0xle_8001010e
dWindows fatal exception: code 0xia8001010e
lWindows fatal exception: code 0xog
File "C:\Prog8001010e
ram Windows fatal exception: code 0xFil8001010e
eWindows fatal exception: code 0xs\8001010e
CWindows fatal exception: hcode 0xi8001010em
eWindows fatal exception: code 0xra8001010e
X 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in ruWindows fatal exception: code 0xn_8001010e
prWindows fatal exception: code 0xovide8001010e
r
File Windows fatal exception: code 0x8001010e"C:
\Windows fatal exception: code 0xPro8001010e
gWindows fatal exception: code 0x8001010eram
Windows fatal exception: code 0xFi8001010e
lWindows fatal exception: code 0xes8001010e
\Windows fatal exception: code 0xChi8001010e
mWindows fatal exception: code 0xer8001010e
aWindows fatal exception: code 0xX 8001010e
1Windows fatal exception: code 0x.38001010e
\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in runWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0xWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e
Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e_provider8001010e
Windows fatal exception: File code 0x"8001010eC
:Windows fatal exception: code 0x\Prog
8001010eWindows fatal exception:
code 0xWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
ram Files\ChimeraX 1.3\bin\l8001010e
ib\Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: sicode 0x8001010e
tWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: e-packacode 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
ges\chimerax\core\toolWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010eshe
dWindows fatal exception: code 0x8001010e\in
fWindows fatal exception: code 0xo.8001010e
pWindows fatal exception: code 0xy", line 8001010e
381Windows fatal exception: code 0x in ru8001010e
nWindows fatal exception: code 0x8001010e_provider
File "Windows fatal exception: code 0x8001010e
CWindows fatal exception: code 0x:\Prog8001010eramWindows fatal exception: code 0x8001010e
Windows fatal exception: Filcode 0x8001010e
es
Windows fatal exception: Windows fatal exception: code 0x8001010e\Ccode 0x8001010e
hi
mWindows fatal exception: code 0x8001010e
eWindows fatal exception: code 0x8001010e
rWindows fatal exception: code 0x8001010e
aWindows fatal exception: code 0x8001010e
XWindows fatal exception: code 0x8001010e
1.3\bin\lib\Windows fatal exception: sicode 0xt8001010ee
-paWindows fatal exception: code 0x8001010eck
ageWindows fatal exception: code 0x8001010e
s\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\tWindows fatal exception: code 0x8001010e
oWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0xolb8001010e
aWindows fatal exception: code 0xr\providers.py", line 45 in run_provider
File "C:\8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010ePro
grWindows fatal exception: code 0x8001010eam Fil
es\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_lWindows fatal exception: code 0x8001010e
oWindows fatal exception: code 0x8001010eop
File "C:\Program Files\Chimer
aX Windows fatal exception: code 0x18001010e.
3\Windows fatal exception: bcode 0xi8001010en
Windows fatal exception: Windows fatal exception: \code 0x8001010e
code 0xWindows fatal exception: code 0x8001010elib\s
8001010eWindows fatal exception: itecode 0x8001010e
-Windows fatal exception:
code 0xWindows fatal exception: pcode 0xa8001010ec
kaWindows fatal exception: gcode 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
es8001010e
Windows fatal exception: Windows fatal exception: \Ccode 0x8001010ecode 0x8001010e
hWindows fatal exception:
iWindows fatal exception: code 0x8001010ecode 0x8001010e
Windows fatal exception: mecode 0x8001010eWindows fatal exception: code 0x8001010e
ra
XWindows fatal exception: code 0x_main.py"8001010e
, line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_cWindows fatal exception: code 0x8001010eode
File "Windows fatal exception: code 0x8001010eC:\Prog
rWindows fatal exception: code 0xam8001010e
Windows fatal exception: code 0xFi8001010e
Windows fatal exception: code 0x8001010e
lWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: es\Chcode 0x8001010e
imerWindows fatal exception: code 0xaX8001010e
1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\opeWindows fatal exception: code 0xn_c8001010e
omWindows fatal exception: mcode 0xa8001010en
d\Windows fatal exception: dcode 0xi8001010ea
loWindows fatal exception: gcode 0x.8001010ep
yWindows fatal exception: "code 0x, line 8001010e135
in Windows fatal exception: scode 0xh8001010eow_open_fi
leWindows fatal exception: code 0x8001010e
_Windows fatal exception: code 0x8001010e
dWindows fatal exception: code 0x8001010e
iWindows fatal exception: code 0x8001010e
aWindows fatal exception: code 0x8001010e
log
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_Windows fatal exception: code 0xope8001010e
nWindows fatal exception: code 0x
File "8001010e
CWindows fatal exception: code 0x:\8001010e
PWindows fatal exception: code 0xrog8001010e
rWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
aWindows fatal exception: mcode 0x 8001010e
Files\ChimeraX 1.3\bin\lib\site-packages\chimeWindows fatal exception: code 0x8001010e
Windows fatal exception: raWindows fatal exception: code 0x8001010e
xWindows fatal exception: \tcode 0x8001010e
oWindows fatal exception: ocode 0xl8001010eb
ar\code 0xp8001010er
ovWindows fatal exception: icode 0xd8001010ee
rWindows fatal exception: scode 0x.8001010ep
yWindows fatal exception: "code 0x, line 8001010e45
in Windows fatal exception: rcode 0xu8001010en
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x_provide8001010e
rWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x File "C:\P8001010e
rWindows fatal exception: code 0xogram File8001010e
s\CWindows fatal exception: code 0x8001010e
hWindows fatal exception: code 0xim8001010e
erWindows fatal exception: acode 0x8001010e
XWindows fatal exception: code 0x 18001010e
.Windows fatal exception: code 0x8001010e
3Windows fatal exception: code 0x8001010e
\Windows fatal exception: code 0x8001010e
bWindows fatal exception: code 0x8001010e
in\Windows fatal exception: code 0x8001010eli
b\sWindows fatal exception: code 0xit8001010e
e-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.pyWindows fatal exception: code 0x", line 1284 in r8001010e
un_prWindows fatal exception: code 0xovider
File "C:\Pr8001010e
ogWindows fatal exception: code 0xram8001010e
FWindows fatal exception: icode 0xl8001010ee
s\Windows fatal exception: Ccode 0xh8001010ei
meWindows fatal exception: rcode 0xa8001010eX
1Windows fatal exception: .code 0x8001010e
3Windows fatal exception: code 0x\bi8001010e
n\lib\Windows fatal exception: code 0x8001010esi
te-Windows fatal exception: code 0xpac8001010e
kWindows fatal exception: code 0xage8001010es\chimerax\
core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
ib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\coreWindows fatal exception: code 0x8001010e
\tWindows fatal exception: code 0xool8001010e
sWindows fatal exception: code 0xhed8001010e
\Windows fatal exception: code 0xin8001010e
fWindows fatal exception: code 0xo.p8001010e
y", line Windows fatal exception: code 0x8001010e
381Windows fatal exception: code 0x in run_provider
File "C:\Program Files\ChimeraX8001010e
1Windows fatal exception: code 0x8001010e.3
\bWindows fatal exception: icode 0xn8001010e\
liWindows fatal exception: bcode 0x\8001010es
itWindows fatal exception: ecode 0x-8001010ep
ackages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in evenWindows fatal exception: code 0xt_8001010e
loWindows fatal exception: ocode 0xp8001010e
File "Windows fatal exception: Ccode 0x:8001010e\
PWindows fatal exception: rcode 0xo8001010eg
rWindows fatal exception: acode 0xm8001010e
FWindows fatal exception: icode 0xl8001010ee
sWindows fatal exception: \code 0xC8001010eh
iWindows fatal exception: mcode 0xe8001010er
aWindows fatal exception: Xcode 0x 8001010e1
.Windows fatal exception: 3code 0x\8001010eb
iWindows fatal exception: ncode 0x\8001010el
ib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_opWindows fatal exception: code 0x8001010een
File
"CWindows fatal exception: code 0x8001010e:\P
roWindows fatal exception: code 0x8001010e
gWindows fatal exception: code 0x8001010e
rWindows fatal exception: code 0x8001010e
aWindows fatal exception: code 0xm F8001010e
iWindows fatal exception: code 0x8001010e
les\ChimeraX 1.3\bin\libWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e\s
itWindows fatal exception: ecode 0x-8001010ep
ackages\chimerax\toolbar\proWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0xvi8001010e
dWindows fatal exception: code 0x8001010eer
sWindows fatal exception: code 0x.p8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
yWindows fatal exception: code 0x", line 458001010e
in Windows fatal exception: code 0xru8001010e
nWindows fatal exception: code 0x_p8001010e
rWindows fatal exception: code 0x8001010eov
ider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packageWindows fatal exception: code 0xs\chimerax\c8001010e
orWindows fatal exception: code 0x8001010e
eWindows fatal exception: code 0x8001010e
\Windows fatal exception: code 0x8001010e
tWindows fatal exception: code 0x8001010e
oWindows fatal exception: code 0x8001010e
oWindows fatal exception: code 0x8001010e
lshed\infWindows fatal exception: code 0x8001010e
o.Windows fatal exception: code 0x8001010e
pWindows fatal exception: code 0x8001010e
yWindows fatal exception: code 0x8001010e
", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program FilesWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x\Chi8001010e
mWindows fatal exception: code 0xer8001010e
aWindows fatal exception: code 0xX 18001010e
.Windows fatal exception: code 0x3\b8001010e
iWindows fatal exception: code 0xn\l8001010e
iWindows fatal exception: code 0xb\site-packages\Ch8001010e
iWindows fatal exception: code 0xme8001010e
rWindows fatal exception: code 0x8001010e
aWindows fatal exception: code 0x8001010e
XWindows fatal exception: code 0x8001010e
_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-pacWindows fatal exception: code 0x8001010ekag
es\Windows fatal exception: code 0x8001010echi
mWindows fatal exception: code 0xer8001010e
aWindows fatal exception: code 0xx\open_command8001010e
\Windows fatal exception: code 0x8001010e
dWindows fatal exception: code 0xia8001010e
lWindows fatal exception: code 0x8001010e
oWindows fatal exception: code 0xg.8001010e
pWindows fatal exception: code 0x8001010ey", line 135
in Windows fatal exception: code 0xsh8001010e
oWindows fatal exception: code 0x8001010ew_ope
n_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x000003f4 (most recent call first):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1284 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
===== Log before crash start =====
> close
> open C:\Users\joony\Desktop\huh format fasta
Summary of feedback from opening C:\Users\joony\Desktop\huh
---
note | Alignment identifier is huh
Opened 1 sequences from huh
> open D:\Organic\RNA_Printer\PT-CI\analysis\HUH\FBNYV\active_residues.cxs
> format session
opened ChimeraX session
w "Show Sequence Viewer"">ui tool show "Show Sequence Viewer"
> sequence chain /A
Alignment identifier is 1/A
> select /A:1
8 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:1-439
3574 atoms, 3649 bonds, 439 residues, 1 model selected
> color sel cornflower blue
> lighting soft
> select clear
> select /A:440
5 atoms, 4 bonds, 1 residue, 1 model selected
> select /A:440-536
784 atoms, 804 bonds, 97 residues, 1 model selected
> color sel orange
> select clear
> select /A:537
8 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:537-901
2978 atoms, 3038 bonds, 365 residues, 1 model selected
> color sel forest green
> select clear
> select /A:536
7 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:440-536
784 atoms, 804 bonds, 97 residues, 1 model selected
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> show sel target ab
> color sel byelement
> select clear
> set bgColor white
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac1/PAP_HUH_TdT_prac1.cxs
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac1/PAP_HUH_TdT_prac1.png width
> 4000 height 2337 supersample 3
> set bgColor black
> select clear
> select /A:439
11 atoms, 10 bonds, 1 residue, 1 model selected
> select /A:439
11 atoms, 10 bonds, 1 residue, 1 model selected
> select /A:433-439
62 atoms, 63 bonds, 7 residues, 1 model selected
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_TdT\PAP_TdT_prac1\PAP_TdT_prac1.cxs format session
opened ChimeraX session
> set bgColor black
> hide surfaces
> select /A:437
5 atoms, 4 bonds, 1 residue, 1 model selected
> select /A:455
8 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:455-456
14 atoms, 13 bonds, 2 residues, 1 model selected
> select /A:436-437
12 atoms, 11 bonds, 2 residues, 1 model selected
> select /A:436-437
12 atoms, 11 bonds, 2 residues, 1 model selected
> select /A:437
5 atoms, 4 bonds, 1 residue, 1 model selected
> select /A:437
5 atoms, 4 bonds, 1 residue, 1 model selected
> select /A:437
5 atoms, 4 bonds, 1 residue, 1 model selected
> select /A:432-437
47 atoms, 46 bonds, 6 residues, 1 model selected
> select /A:428
9 atoms, 8 bonds, 1 residue, 1 model selected
> select /A:428-433
54 atoms, 54 bonds, 6 residues, 1 model selected
> select
> /A:6-8,13-15,18-29,39-45,61-67,126-132,155-161,170-176,178-191,197-200,202-212,215-226,231-240,244-247,249-254,262-279,286-293,295-309,313-331,336-349,357-365,369-383,386-400,403-414,446-448,458-473,477-492,500-503,511-523,527-534,536-546,552-560,566-571,579-586,588-592,597-614,624-627,652-663,703-705,731-742,745-759,782-788,796-798
3426 atoms, 3455 bonds, 412 residues, 1 model selected
> close #1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac1\PAP_HUH_TdT_prac1.cxs format
> session
opened ChimeraX session
> select /A:536
7 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:536
7 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:536-540
36 atoms, 36 bonds, 5 residues, 1 model selected
> select /A:536
7 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:536
7 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:534-535
18 atoms, 18 bonds, 2 residues, 1 model selected
> select /A:534-536
25 atoms, 26 bonds, 3 residues, 1 model selected
> close
> open D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb
Chain information for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb #1
---
Chain | Description
A | No description available
> close
> open D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb
Chain information for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb #1
---
Chain | Description
A | No description available
> set bgColor black
> ui tool show "Show Sequence Viewer"
> sequence chain /A
Alignment identifier is 1/A
> select /A:1
8 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:1-439
3574 atoms, 3649 bonds, 439 residues, 1 model selected
> color sel cornflower blue
> select clear
> select /A:440
5 atoms, 4 bonds, 1 residue, 1 model selected
> select /A:440-536
784 atoms, 804 bonds, 97 residues, 1 model selected
> color sel orange
> select /A:537
9 atoms, 8 bonds, 1 residue, 1 model selected
> select /A:537-542
54 atoms, 54 bonds, 6 residues, 1 model selected
> color sel dark gray
> select clear
> select /A:543
8 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:543-907
2978 atoms, 3038 bonds, 365 residues, 1 model selected
> color sel forest green
> select clear
> lighting soft
> select
> /A:23-25,30-32,35-46,55-62,78-84,143-149,153-155,172-178,187-193,195-208,214-217,219-229,232-243,248-257,261-264,266-271,279-296,303-310,312-326,330-349,353-366,374-381,386-400,403-417,420-431,492-498,511-517,552-554,564-579,583-598,606-609,617-629,633-640,642-652,658-666,672-677,685-692,694-698,703-720,758-769,809-811,837-848,851-863,888-894,902-904
3508 atoms, 3535 bonds, 424 residues, 1 model selected
> select /A:273
7 atoms, 6 bonds, 1 residue, 1 model selected
> select /A:273
7 atoms, 6 bonds, 1 residue, 1 model selected
> select /A:535
7 atoms, 6 bonds, 1 residue, 1 model selected
> select /A:523-535
112 atoms, 116 bonds, 13 residues, 1 model selected
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> show sel target ab
> color sel byhetero
> select clear
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> color sel byelement
> select clear
> coulombic
Using Amber 20 recommended default charges and atom types for standard
residues
Coulombic values for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb_A
SES surface #1.1: minimum, -18.60, mean 0.75, maximum 21.47
To also show corresponding color key, enter the above coulombic command and
add key true
> transparency 50
> hide surfaces
> set bgColor white
> mlp
Map values for surface "PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb_A
SES surface": minimum -28.89, mean -4.624, maximum 23.31
To also show corresponding color key, enter the above mlp command and add key
true
> coulombic
Coulombic values for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb_A
SES surface #1.1: minimum, -18.60, mean 0.75, maximum 21.47
To also show corresponding color key, enter the above coulombic command and
add key true
> hide surfaces
> show surfaces
> color #1.1 #b4b4b4 transparency 0
> transparency 75
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> style sel sphere
Changed 12 atom styles
> style sel ball
Changed 12 atom styles
> style sel stick
Changed 12 atom styles
> transparency 80
> select clear
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2.cxs
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2.png width
> 5000 height 2917 supersample 3
> hide surfaces
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> style sel sphere
Changed 12 atom styles
> style sel ball
Changed 12 atom styles
> select clear
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> label (#!1 & sel) text TYR*
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2_Tyr*.cxs
[Errno 22] Invalid argument: 'D:/Organic/RNA_Printer/PT-
CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2_Tyr*.cxs.4880.tmp'
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2_Tyr.cxs
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2_Tyr.png
> width 5000 height 2917 supersample 3
> select clear
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> select /A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> ~label (#!1 & sel) residues
> select clear
> set bgColor black
> hide atoms
> select clear
> show atoms
> set bgColor white
> set bgColor black
> hide atoms
> coulombic
Coulombic values for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb_A
SES surface #1.1: minimum, -18.60, mean 0.75, maximum 21.47
To also show corresponding color key, enter the above coulombic command and
add key true
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2.cxs format
> session
opened ChimeraX session
> coulombic
Coulombic values for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb_A
SES surface #1.1: minimum, -18.60, mean 0.75, maximum 21.47
To also show corresponding color key, enter the above coulombic command and
add key true
> set bgColor black
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2_electrostatics.png
> width 5000 height 2917 supersample 3
> hide atoms
> hide surfaces
> close #1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2_Tyr.cxs
> format session
opened ChimeraX session
> close #1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac1\PAP_HUH_TdT_prac1.cxs format
> session
opened ChimeraX session
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2.cxs format
> session
opened ChimeraX session
> hide surfaces
> select /A:1
8 atoms, 7 bonds, 1 residue, 1 model selected
> select /A:1-67
526 atoms, 533 bonds, 67 residues, 1 model selected
> show sel surfaces
> select /A:112
11 atoms, 11 bonds, 1 residue, 1 model selected
> select /A:112-193
665 atoms, 675 bonds, 82 residues, 1 model selected
> show sel surfaces
> select /A:510
7 atoms, 6 bonds, 1 residue, 1 model selected
> select /A:510-596
705 atoms, 717 bonds, 87 residues, 1 model selected
> show sel surfaces
> select clear
> hide surfaces
> select clear
> show surfaces
> hide surfaces
> set bgColor black
> open 2hwt
2hwt title:
NMR solution structure of the Master-Rep protein nuclease domain (2-95) from
the Faba Bean Necrotic Yellows Virus [more info...]
Chain information for 2hwt
---
Chain | Description | UniProt
2.1/A 2.2/A 2.3/A 2.4/A 2.5/A 2.6/A 2.7/A 2.8/A 2.9/A 2.10/A 2.11/A 2.12/A
2.13/A 2.14/A 2.15/A 2.16/A 2.17/A 2.18/A 2.19/A 2.20/A 2.21/A 2.22/A 2.23/A
2.24/A 2.25/A 2.26/A 2.27/A 2.28/A 2.29/A 2.30/A 2.31/A | Putative replicase-
associated protein | O39828_9VIRU
> close #2.2-31
> color #2.1 red transparency 0
> color #2.1 #00aa00 transparency 0
> color #2.1 black transparency 0
> color #2.1 #55ffff transparency 0
> color #2.1 #ffaaff transparency 0
> select clear
> ui tool show Matchmaker
> select clear
> select #1/A:440
5 atoms, 4 bonds, 1 residue, 1 model selected
> select #1/A:440-536
784 atoms, 804 bonds, 97 residues, 1 model selected
> matchmaker #2.1 to #1 & sel
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#2.1), sequence alignment score = 433.7
RMSD between 53 pruned atom pairs is 1.029 angstroms; (across all 94 pairs:
4.437)
> matchmaker #2.1 to #1 & sel
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#2.1), sequence alignment score = 433.7
RMSD between 53 pruned atom pairs is 1.029 angstroms; (across all 94 pairs:
4.437)
> matchmaker #2.1 to #1 & sel
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#2.1), sequence alignment score = 433.7
RMSD between 53 pruned atom pairs is 1.029 angstroms; (across all 94 pairs:
4.437)
> matchmaker #2.1 to #1 & sel
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#2.1), sequence alignment score = 433.7
RMSD between 53 pruned atom pairs is 1.029 angstroms; (across all 94 pairs:
4.437)
> matchmaker #2.1 to #1 & sel
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#2.1), sequence alignment score = 433.7
RMSD between 53 pruned atom pairs is 1.029 angstroms; (across all 94 pairs:
4.437)
> select clear
> select #1/A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> select #1/A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> color (#!1 & sel) orange
> select clear
> ui tool show "Show Sequence Viewer"
> sequence chain #2.1/A
Alignment identifier is 2.1/A
> select #2.1/A:78-79
31 atoms, 31 bonds, 2 residues, 1 model selected
> select #2.1/A:78-79
31 atoms, 31 bonds, 2 residues, 1 model selected
> select #2.1/A:79
21 atoms, 21 bonds, 1 residue, 1 model selected
> select #2.1/A:79
21 atoms, 21 bonds, 1 residue, 1 model selected
> show sel target ab
> select clear
> select #2.1/A:79@HD2
1 atom, 1 residue, 1 model selected
> select add #2.1/A:79@HE2
2 atoms, 1 residue, 1 model selected
> select add #2.1/A:79@HH
3 atoms, 1 residue, 1 model selected
> select add #2.1/A:79@HE1
4 atoms, 1 residue, 1 model selected
> select add #2.1/A:79@HD1
5 atoms, 1 residue, 1 model selected
> select add #2.1/A:79@HB2
6 atoms, 1 residue, 1 model selected
> select add #2.1/A:79@HB3
7 atoms, 1 residue, 1 model selected
> delete atoms sel
> delete bonds sel
> select clear
> select #2.1/A:79
14 atoms, 14 bonds, 1 residue, 1 model selected
> select #2.1/A:79
14 atoms, 14 bonds, 1 residue, 1 model selected
> select clear
> select #2.1/A:80
11 atoms, 10 bonds, 1 residue, 1 model selected
> select clear
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/HUH_2HWT_alignment.cxs
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\HUH_2HWT_alignment.cxs format
> session
opened ChimeraX session
> close #2#1
> open 1ao6 format mmcif fromDatabase pdb
1ao6 title:
Crystal structure of human serum albumin [more info...]
Chain information for 1ao6 #1
---
Chain | Description | UniProt
A B | serum albumin | ALBU_HUMAN
1ao6 mmCIF Assemblies
---
1| author_defined_assembly
2| author_defined_assembly
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2.cxs format
> session
opened ChimeraX session
> close #1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\HUH_2HWT_alignment.cxs format
> session
opened ChimeraX session
> close #2#1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2_Tyr.cxs
> format session
opened ChimeraX session
> set bgColor black
> select clear
> hide atoms
> show atoms
> hide cartoons
Drag select of 7390 atoms, 7548 bonds
> color (#!1 & sel) byhetero
> select clear
> style sphere
Changed 7390 atom styles
> style stick
Changed 7390 atom styles
> style ball
Changed 7390 atom styles
> select clear
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_allatom_1.png
> width 5000 height 2917 supersample 3
Drag select of 7390 atoms, 7548 bonds
> color (#!1 & sel) byelement
> select clear
> style stick
Changed 7390 atom styles
> style ball
Changed 7390 atom styles
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_allatom_2.png
> width 5000 height 2917 supersample 3
> style sphere
Changed 7390 atom styles
> style sphere
Changed 7390 atom styles
> style ball
Changed 7390 atom styles
> style ringFill thin
Changed 907 residue ring styles
> style ringFill off
Changed 907 residue ring styles
> close #1
> open 2hwt format mmcif fromDatabase pdb
2hwt title:
NMR solution structure of the Master-Rep protein nuclease domain (2-95) from
the Faba Bean Necrotic Yellows Virus [more info...]
Chain information for 2hwt
---
Chain | Description | UniProt
1.1/A 1.2/A 1.3/A 1.4/A 1.5/A 1.6/A 1.7/A 1.8/A 1.9/A 1.10/A 1.11/A 1.12/A
1.13/A 1.14/A 1.15/A 1.16/A 1.17/A 1.18/A 1.19/A 1.20/A 1.21/A 1.22/A 1.23/A
1.24/A 1.25/A 1.26/A 1.27/A 1.28/A 1.29/A 1.30/A 1.31/A | Putative replicase-
associated protein | O39828_9VIRU
> close #1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\HUH_2HWT_alignment.cxs format
> session
opened ChimeraX session
> close #2.1
> open 2hwt
2hwt title:
NMR solution structure of the Master-Rep protein nuclease domain (2-95) from
the Faba Bean Necrotic Yellows Virus [more info...]
Chain information for 2hwt
---
Chain | Description | UniProt
3.1/A 3.2/A 3.3/A 3.4/A 3.5/A 3.6/A 3.7/A 3.8/A 3.9/A 3.10/A 3.11/A 3.12/A
3.13/A 3.14/A 3.15/A 3.16/A 3.17/A 3.18/A 3.19/A 3.20/A 3.21/A 3.22/A 3.23/A
3.24/A 3.25/A 3.26/A 3.27/A 3.28/A 3.29/A 3.30/A 3.31/A | Putative replicase-
associated protein | O39828_9VIRU
> ui tool show Matchmaker
> matchmaker #3.1-31 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.1), sequence alignment score = 433.7
RMSD between 53 pruned atom pairs is 1.029 angstroms; (across all 94 pairs:
4.437)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.2), sequence alignment score = 443.9
RMSD between 54 pruned atom pairs is 1.050 angstroms; (across all 94 pairs:
4.438)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.3), sequence alignment score = 424.7
RMSD between 53 pruned atom pairs is 1.071 angstroms; (across all 94 pairs:
4.468)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.4), sequence alignment score = 440.9
RMSD between 53 pruned atom pairs is 1.037 angstroms; (across all 94 pairs:
4.362)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.5), sequence alignment score = 433.7
RMSD between 54 pruned atom pairs is 1.108 angstroms; (across all 94 pairs:
4.475)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.6), sequence alignment score = 430.1
RMSD between 57 pruned atom pairs is 1.118 angstroms; (across all 94 pairs:
4.519)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.7), sequence alignment score = 430.1
RMSD between 56 pruned atom pairs is 1.057 angstroms; (across all 94 pairs:
4.392)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.8), sequence alignment score = 433.7
RMSD between 55 pruned atom pairs is 1.037 angstroms; (across all 94 pairs:
4.486)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.9), sequence alignment score = 434.9
RMSD between 56 pruned atom pairs is 1.125 angstroms; (across all 94 pairs:
4.364)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.10), sequence alignment score = 448.1
RMSD between 56 pruned atom pairs is 1.118 angstroms; (across all 94 pairs:
4.511)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.11), sequence alignment score = 417.5
RMSD between 55 pruned atom pairs is 1.099 angstroms; (across all 94 pairs:
4.577)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.12), sequence alignment score = 428.3
RMSD between 57 pruned atom pairs is 1.102 angstroms; (across all 94 pairs:
4.638)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.13), sequence alignment score = 447.5
RMSD between 54 pruned atom pairs is 1.083 angstroms; (across all 94 pairs:
4.494)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.14), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.143 angstroms; (across all 94 pairs:
4.477)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.15), sequence alignment score = 440.9
RMSD between 54 pruned atom pairs is 1.084 angstroms; (across all 94 pairs:
4.508)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.16), sequence alignment score = 447.5
RMSD between 55 pruned atom pairs is 1.144 angstroms; (across all 94 pairs:
4.512)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.17), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.116 angstroms; (across all 94 pairs:
4.337)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.18), sequence alignment score = 434.9
RMSD between 55 pruned atom pairs is 1.073 angstroms; (across all 94 pairs:
4.547)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.19), sequence alignment score = 442.1
RMSD between 52 pruned atom pairs is 1.051 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.20), sequence alignment score = 434.9
RMSD between 57 pruned atom pairs is 1.083 angstroms; (across all 94 pairs:
4.395)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.21), sequence alignment score = 440.9
RMSD between 54 pruned atom pairs is 1.033 angstroms; (across all 94 pairs:
4.450)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.22), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.103 angstroms; (across all 94 pairs:
4.486)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.23), sequence alignment score = 435.5
RMSD between 56 pruned atom pairs is 1.079 angstroms; (across all 94 pairs:
4.445)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.24), sequence alignment score = 435.5
RMSD between 52 pruned atom pairs is 0.992 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.25), sequence alignment score = 434.9
RMSD between 55 pruned atom pairs is 1.067 angstroms; (across all 94 pairs:
4.505)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.26), sequence alignment score = 425.9
RMSD between 52 pruned atom pairs is 1.020 angstroms; (across all 94 pairs:
4.442)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.27), sequence alignment score = 451.1
RMSD between 53 pruned atom pairs is 1.098 angstroms; (across all 94 pairs:
4.455)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.28), sequence alignment score = 434.9
RMSD between 52 pruned atom pairs is 0.980 angstroms; (across all 94 pairs:
4.556)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.29), sequence alignment score = 435.5
RMSD between 58 pruned atom pairs is 1.091 angstroms; (across all 94 pairs:
4.524)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.30), sequence alignment score = 433.7
RMSD between 51 pruned atom pairs is 1.048 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.31), sequence alignment score = 420.5
RMSD between 52 pruned atom pairs is 1.077 angstroms; (across all 94 pairs:
4.454)
> matchmaker #3.1-31 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.1), sequence alignment score = 433.7
RMSD between 53 pruned atom pairs is 1.029 angstroms; (across all 94 pairs:
4.437)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.2), sequence alignment score = 443.9
RMSD between 54 pruned atom pairs is 1.050 angstroms; (across all 94 pairs:
4.438)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.3), sequence alignment score = 424.7
RMSD between 53 pruned atom pairs is 1.071 angstroms; (across all 94 pairs:
4.468)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.4), sequence alignment score = 440.9
RMSD between 53 pruned atom pairs is 1.037 angstroms; (across all 94 pairs:
4.362)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.5), sequence alignment score = 433.7
RMSD between 54 pruned atom pairs is 1.108 angstroms; (across all 94 pairs:
4.475)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.6), sequence alignment score = 430.1
RMSD between 57 pruned atom pairs is 1.118 angstroms; (across all 94 pairs:
4.519)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.7), sequence alignment score = 430.1
RMSD between 56 pruned atom pairs is 1.057 angstroms; (across all 94 pairs:
4.392)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.8), sequence alignment score = 433.7
RMSD between 55 pruned atom pairs is 1.037 angstroms; (across all 94 pairs:
4.486)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.9), sequence alignment score = 434.9
RMSD between 56 pruned atom pairs is 1.125 angstroms; (across all 94 pairs:
4.364)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.10), sequence alignment score = 448.1
RMSD between 56 pruned atom pairs is 1.118 angstroms; (across all 94 pairs:
4.511)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.11), sequence alignment score = 417.5
RMSD between 55 pruned atom pairs is 1.099 angstroms; (across all 94 pairs:
4.577)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.12), sequence alignment score = 428.3
RMSD between 57 pruned atom pairs is 1.102 angstroms; (across all 94 pairs:
4.638)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.13), sequence alignment score = 447.5
RMSD between 54 pruned atom pairs is 1.083 angstroms; (across all 94 pairs:
4.494)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.14), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.143 angstroms; (across all 94 pairs:
4.477)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.15), sequence alignment score = 440.9
RMSD between 54 pruned atom pairs is 1.084 angstroms; (across all 94 pairs:
4.508)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.16), sequence alignment score = 447.5
RMSD between 55 pruned atom pairs is 1.144 angstroms; (across all 94 pairs:
4.512)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.17), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.116 angstroms; (across all 94 pairs:
4.337)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.18), sequence alignment score = 434.9
RMSD between 55 pruned atom pairs is 1.073 angstroms; (across all 94 pairs:
4.547)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.19), sequence alignment score = 442.1
RMSD between 52 pruned atom pairs is 1.051 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.20), sequence alignment score = 434.9
RMSD between 57 pruned atom pairs is 1.083 angstroms; (across all 94 pairs:
4.395)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.21), sequence alignment score = 440.9
RMSD between 54 pruned atom pairs is 1.033 angstroms; (across all 94 pairs:
4.450)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.22), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.103 angstroms; (across all 94 pairs:
4.486)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.23), sequence alignment score = 435.5
RMSD between 56 pruned atom pairs is 1.079 angstroms; (across all 94 pairs:
4.445)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.24), sequence alignment score = 435.5
RMSD between 52 pruned atom pairs is 0.992 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.25), sequence alignment score = 434.9
RMSD between 55 pruned atom pairs is 1.067 angstroms; (across all 94 pairs:
4.505)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.26), sequence alignment score = 425.9
RMSD between 52 pruned atom pairs is 1.020 angstroms; (across all 94 pairs:
4.442)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.27), sequence alignment score = 451.1
RMSD between 53 pruned atom pairs is 1.098 angstroms; (across all 94 pairs:
4.455)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.28), sequence alignment score = 434.9
RMSD between 52 pruned atom pairs is 0.980 angstroms; (across all 94 pairs:
4.556)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.29), sequence alignment score = 435.5
RMSD between 58 pruned atom pairs is 1.091 angstroms; (across all 94 pairs:
4.524)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.30), sequence alignment score = 433.7
RMSD between 51 pruned atom pairs is 1.048 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.31), sequence alignment score = 420.5
RMSD between 52 pruned atom pairs is 1.077 angstroms; (across all 94 pairs:
4.454)
> matchmaker #3.1-31 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.1), sequence alignment score = 433.7
RMSD between 53 pruned atom pairs is 1.029 angstroms; (across all 94 pairs:
4.437)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.2), sequence alignment score = 443.9
RMSD between 54 pruned atom pairs is 1.050 angstroms; (across all 94 pairs:
4.438)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.3), sequence alignment score = 424.7
RMSD between 53 pruned atom pairs is 1.071 angstroms; (across all 94 pairs:
4.468)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.4), sequence alignment score = 440.9
RMSD between 53 pruned atom pairs is 1.037 angstroms; (across all 94 pairs:
4.362)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.5), sequence alignment score = 433.7
RMSD between 54 pruned atom pairs is 1.108 angstroms; (across all 94 pairs:
4.475)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.6), sequence alignment score = 430.1
RMSD between 57 pruned atom pairs is 1.118 angstroms; (across all 94 pairs:
4.519)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.7), sequence alignment score = 430.1
RMSD between 56 pruned atom pairs is 1.057 angstroms; (across all 94 pairs:
4.392)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.8), sequence alignment score = 433.7
RMSD between 55 pruned atom pairs is 1.037 angstroms; (across all 94 pairs:
4.486)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.9), sequence alignment score = 434.9
RMSD between 56 pruned atom pairs is 1.125 angstroms; (across all 94 pairs:
4.364)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.10), sequence alignment score = 448.1
RMSD between 56 pruned atom pairs is 1.118 angstroms; (across all 94 pairs:
4.511)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.11), sequence alignment score = 417.5
RMSD between 55 pruned atom pairs is 1.099 angstroms; (across all 94 pairs:
4.577)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.12), sequence alignment score = 428.3
RMSD between 57 pruned atom pairs is 1.102 angstroms; (across all 94 pairs:
4.638)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.13), sequence alignment score = 447.5
RMSD between 54 pruned atom pairs is 1.083 angstroms; (across all 94 pairs:
4.494)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.14), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.143 angstroms; (across all 94 pairs:
4.477)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.15), sequence alignment score = 440.9
RMSD between 54 pruned atom pairs is 1.084 angstroms; (across all 94 pairs:
4.508)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.16), sequence alignment score = 447.5
RMSD between 55 pruned atom pairs is 1.144 angstroms; (across all 94 pairs:
4.512)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.17), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.116 angstroms; (across all 94 pairs:
4.337)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.18), sequence alignment score = 434.9
RMSD between 55 pruned atom pairs is 1.073 angstroms; (across all 94 pairs:
4.547)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.19), sequence alignment score = 442.1
RMSD between 52 pruned atom pairs is 1.051 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.20), sequence alignment score = 434.9
RMSD between 57 pruned atom pairs is 1.083 angstroms; (across all 94 pairs:
4.395)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.21), sequence alignment score = 440.9
RMSD between 54 pruned atom pairs is 1.033 angstroms; (across all 94 pairs:
4.450)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.22), sequence alignment score = 444.5
RMSD between 56 pruned atom pairs is 1.103 angstroms; (across all 94 pairs:
4.486)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.23), sequence alignment score = 435.5
RMSD between 56 pruned atom pairs is 1.079 angstroms; (across all 94 pairs:
4.445)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.24), sequence alignment score = 435.5
RMSD between 52 pruned atom pairs is 0.992 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.25), sequence alignment score = 434.9
RMSD between 55 pruned atom pairs is 1.067 angstroms; (across all 94 pairs:
4.505)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.26), sequence alignment score = 425.9
RMSD between 52 pruned atom pairs is 1.020 angstroms; (across all 94 pairs:
4.442)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.27), sequence alignment score = 451.1
RMSD between 53 pruned atom pairs is 1.098 angstroms; (across all 94 pairs:
4.455)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.28), sequence alignment score = 434.9
RMSD between 52 pruned atom pairs is 0.980 angstroms; (across all 94 pairs:
4.556)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.29), sequence alignment score = 435.5
RMSD between 58 pruned atom pairs is 1.091 angstroms; (across all 94 pairs:
4.524)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.30), sequence alignment score = 433.7
RMSD between 51 pruned atom pairs is 1.048 angstroms; (across all 94 pairs:
4.543)
Matchmaker PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb, chain A (#1)
with 2hwt, chain A (#3.31), sequence alignment score = 420.5
RMSD between 52 pruned atom pairs is 1.077 angstroms; (across all 94 pairs:
4.454)
> select #1/A:517
12 atoms, 12 bonds, 1 residue, 1 model selected
> hide sel atoms
> select clear
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/HUH_2HWT_alignment.cxs
Drag select of 129 residues
Drag select of 199 residues
> show (#3.1-31#!1 & sel) target ab
> select clear
> hide atoms
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/HUH_2HWT_alignment.cxs
> close #2#1,3
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\HUH_2HWT_alignment.cxs format
> session
opened ChimeraX session
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/HUH_2HWT_alignment.png width
> 5000 height 2917 supersample 3
> close #2#1,3
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac1\PAP_HUH_TdT_prac1_cc593_unrelaxed_model_1_rank_1.pdb
> format pdb
Chain information for PAP_HUH_TdT_prac1_cc593_unrelaxed_model_1_rank_1.pdb #1
---
Chain | Description
A | No description available
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac1\PAP_HUH_TdT_prac1_cc593_unrelaxed_model_1_rank_1.pdb
> format pdb
Chain information for PAP_HUH_TdT_prac1_cc593_unrelaxed_model_1_rank_1.pdb #1
---
Chain | Description
A | No description available
> close
> open D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/alphafold/PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb
Chain information for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb #1
---
Chain | Description
A | No description available
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_TdT_prac1(+HUH).cxs format session
opened ChimeraX session
> close #1-2#2.1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\alphafold\PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb
> format pdb
Chain information for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb #1
---
Chain | Description
A | No description available
> lighting simple
> lighting full
> lighting shadows false
> lighting shadows true
> lighting shadows false
> graphics silhouettes true
> graphics silhouettes false
> lighting flat
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2.cxs format
> session
opened ChimeraX session
> lighting flat
> save D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/PAP_HUH_TdT_prac2_flat.png
> width 5000 height 2917 supersample 3
> rainbow
> color #1.1 #ff557f33
> color #1.1 #b4b4b433
> transparency 80
> show atoms
Drag select of PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb_A SES
surface, 4655 atoms, 907 residues, 3958 bonds
> color (#!1 & sel) byelement
> select clear
> style stick
Changed 7390 atom styles
> style stick
Changed 7390 atom styles
> color #1.1 #b4b4b4 transparency 0
> transparency 80
> select clear
> hide atoms
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2.cxs format
> session
opened ChimeraX session
> close #1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2.cxs format
> session
opened ChimeraX session
> coulombic
Coulombic values for PAP_HUH_TdT_prac2_c87d0_unrelaxed_model_1_rank_1.pdb_A
SES surface #1.1: minimum, -18.60, mean 0.75, maximum 21.47
To also show corresponding color key, enter the above coulombic command and
add key true
> lighting flat
> set bgColor black
> close #1
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\PAP_HUH_TdT_prac2.cxs format
> session
opened ChimeraX session
> lighting flat
> rainbow
> color #1.1 #5555ff33
> color #1.1 #b4b4b433
> transparency 60
> transparency 50
> transparency 75
> save "D:/Organic/RNA_Printer/PT-
> CI/construction/PAP_HUH_TdT/PAP_HUH_TdT_prac2/Nucleic acid printer.png"
> width 5000 height 2917 supersample 3
> set bgColor black
> set bgColor white
> close
> open D:\Organic\RNA_Printer\PT-CI\construction\PAP_HUH_TdT\TdT_PPKTPP.cxs
> format session
opened ChimeraX session
> close
> open D:\Organic\RNA_Printer\PT-
> CI\construction\PAP_HUH_TdT\PAP_HUH_TdT_prac2\HUH_2HWT_alignment.cxs format
> session
opened ChimeraX session
> show atoms
> hide cartoons
> close #2#1,3
===== Log before crash end =====
Log:
Startup Errors
---
error | Bundle 'ChimeraX-ISOLDE' custom initialization failed
warning | Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
packages\chimerax\core\toolshed\info.py", line 484, in get_module
m = importlib.import_module(self.package_name)
File "C:\Program Files\ChimeraX 1.3\bin\lib\importlib\\__init__.py", line 127,
in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 850, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "C:\Users\joony\AppData\Local\UCSF\ChimeraX\1.3\site-
packages\chimerax\isolde\\__init__.py", line 51, in <module>
__version__ = _version()
File "C:\Users\joony\AppData\Local\UCSF\ChimeraX\1.3\site-
packages\chimerax\isolde\\__init__.py", line 49, in _version
return pkg_resources.require('ChimeraX-ISOLDE')[0].version
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
packages\pkg_resources\\__init__.py", line 886, in require
needed = self.resolve(parse_requirements(requirements))
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
packages\pkg_resources\\__init__.py", line 777, in resolve
raise VersionConflict(dist, req).with_context(dependent_req)
pkg_resources.ContextualVersionConflict: (ChimeraX-UI 1.2.1
(c:\users\joony\appdata\local\ucsf\chimerax\1.3\site-packages),
Requirement.parse('ChimeraX-UI~=1.10'), {'ChimeraX-SaveCommand'})
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
packages\chimerax\core\toolshed\info.py", line 359, in initialize
api = self._get_api(session.logger)
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in _get_api
m = self.get_module()
File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
packages\chimerax\core\toolshed\info.py", line 486, in get_module
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-ISOLDE's
module: (ChimeraX-UI 1.2.1
(c:\users\joony\appdata\local\ucsf\chimerax\1.3\site-packages),
Requirement.parse('ChimeraX-UI~=1.10'), {'ChimeraX-SaveCommand'})
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 3.3.0 - Build 27.20.100.8730
OpenGL renderer: Intel(R) HD Graphics 620
OpenGL vendor: Intel
Manufacturer: SAMSUNG ELECTRONICS CO., LTD.
Model: 900X5N
OS: Microsoft Windows 10 Home (Build 19043)
Memory: 8,499,666,944
MaxProcessMemory: 137,438,953,344
CPU: 4 Intel(R) Core(TM) i5-7200U CPU @ 2.50GHz
OSLanguage: ko-KR
Locale: ('en_US', 'cp949')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.10.8
cftime: 1.5.1.1
charset-normalizer: 2.0.9
ChimeraX-AddCharge: 1.2.2
ChimeraX-AddH: 2.1.3
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.31
ChimeraX-AtomicLibrary: 4.2
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.6.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.2
ChimeraX-Clipper: 0.17.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-Cytoscape: 0.1
ChimeraX-DataFormats: 1.2.2
ChimeraX-DevelExtras: 0.4.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ISOLDE: 1.3
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.4
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.2.6
ChimeraX-ModelPanel: 1.2.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6.5
ChimeraX-PDBBio: 1.0
ChimeraX-PDBImages: 1.1
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-Phenix: 0.3
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RMF: 0.11
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-TestManager: 0.3
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.1
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
comtypes: 1.1.10
cxservices: 1.1
cycler: 0.11.0
Cython: 0.29.24
decorator: 5.1.0
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.6.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.21
imagecodecs: 2021.4.28
imagesize: 1.3.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 3.0.1
jupyter-client: 6.1.12
jupyter-core: 4.9.1
kiwisolver: 1.3.2
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 2.0.1
matplotlib: 3.4.3
matplotlib-inline: 0.1.3
MolecularDynamicsViewer: 1.3
msgpack: 1.0.2
netCDF4: 1.5.7
networkx: 2.6.3
numexpr: 2.8.0
numpy: 1.21.2
openvr: 1.16.801
packaging: 21.3
ParmEd: 3.2.0
parso: 0.8.3
pickleshare: 0.7.5
Pillow: 8.3.2
pip: 21.2.4
pkginfo: 1.7.1
prompt-toolkit: 3.0.23
psutil: 5.8.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.10.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.6
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.2
pytz: 2021.3
pywin32: 228
pyzmq: 22.3.0
qtconsole: 5.1.1
QtPy: 1.11.3
RandomWords: 0.3.0
requests: 2.26.0
scipy: 1.7.1
Send2Trash: 1.8.0
SEQCROW: 1.3.2
setuptools: 57.5.0
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.2.0
sphinx-autodoc-typehints: 1.12.0
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.7
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.0
wheel-filename: 1.3.0
WMI: 1.5.1
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Platform |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash using File→Open on Windows |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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