Opened 4 years ago
Closed 4 years ago
#6457 closed defect (duplicate)
Problem saving settings file
Reported by: | Owned by: | pett | |
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Priority: | normal | Milestone: | |
Component: | Input/Output | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Linux-3.10.0-1160.6.1.el7.x86_64-x86_64-with-centos-7.9.2009-Core ChimeraX Version: 1.0 (2020-06-04 23:15:07 UTC) Description (Describe the actions that caused this problem to occur here) Log: Startup Errors --- error | ChimeraX requires OpenGL graphics version 3.3. Your computer graphics driver provided version 2.1 Try updating your graphics driver. warning | No statusbar messages will be shown due to inadequate OpenGL note | Updating list of available bundles failed: Internal Server Error Traceback (most recent call last): File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/safesave.py", line 97, in __exit__ os.replace(self._tmp_filename, self.name) FileNotFoundError: [Errno 2] No such file or directory: '/home/beta/.config/ChimeraX/ModelPanel-1.tmp' -> '/home/beta/.config/ChimeraX/ModelPanel-1' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/toolshed/info.py", line 531, in start_tool ti = api._api_caller.start_tool(api, session, self, tool_info) File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/toolshed/__init__.py", line 1587, in start_tool return cls._get_func(api, "start_tool")(session, ti.name) File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/model_panel/__init__.py", line 21, in start_tool return model_panel(session, tool_name) File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/model_panel/tool.py", line 345, in model_panel _mp = ModelPanel(session, tool_name) File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/model_panel/tool.py", line 29, in __init__ now = self.settings.last_use = time() File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/settings.py", line 190, in __setattr__ ConfigFile.__setattr__(self, name, value) File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/configfile.py", line 365, in __setattr__ ConfigFile.save(self) File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/configfile.py", line 315, in save self._config.write(f) File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/safesave.py", line 109, in __exit__ os.remove(self._tmp_filename) FileNotFoundError: [Errno 2] No such file or directory: '/home/beta/.config/ChimeraX/ModelPanel-1.tmp' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/UCSF/ChimeraX/lib/python3.7/site-packages/chimerax/core/tools.py", line 379, in start_tools bi.start_tool(session, tool_name) File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/toolshed/info.py", line 537, in start_tool "start_tool() failed for tool %s in bundle %s:\n%s" % (tool_name, self.name, str(e))) chimerax.core.toolshed.ToolshedError: start_tool() failed for tool Model Panel in bundle ChimeraX-ModelPanel: [Errno 2] No such file or directory: '/home/beta/.config/ChimeraX/ModelPanel-1.tmp' Tool "Model Panel" failed to start: chimerax.core.toolshed.ToolshedError: start_tool() failed for tool Model Panel in bundle ChimeraX-ModelPanel: [Errno 2] No such file or directory: '/home/beta/.config/ChimeraX/ModelPanel-1.tmp' File "/opt/UCSF/ChimeraX/lib/python3.7/site- packages/chimerax/core/toolshed/info.py", line 537, in start_tool "start_tool() failed for tool %s in bundle %s:\n%s" % (tool_name, self.name, str(e))) See log for complete Python traceback. UCSF ChimeraX version: 1.0 (2020-06-04) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open /run/media/beta/DATA/Arvind/phenix_0p1G_THC/0p1Gly_THC.pdb 0p1Gly_THC.pdb title: 0P1G32T [more info...] Chain information for 0p1Gly_THC.pdb #1 --- Chain | Description A B C D E | glycine receptor subunit ALPHAZ1 Non-standard residues in 0p1Gly_THC.pdb #1 --- NAG — 2-acetamido-2-deoxy-β-D-glucopyranose (N-acetyl-β-D-glucosamine; 2-acetamido-2-deoxy-β-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-acetyl-D-glucosamine) TCI — (6AR,10AR)-6,6,9-trimethyl-3-pentyl-6A,7,8,10A-tetrahydro-6H-benzo[C]chromen-1-ol (tetrahydrocannabinol) OpenGL version: unknown Could not make opengl context current Manufacturer: TYAN Model: B7109F77DV14HR-2T-N OS: CentOS Linux 7 Core Architecture: 64bit ELF CPU: 64 Intel(R) Xeon(R) Gold 6130 CPU @ 2.10GHz Cache Size: 22528 KB Memory: total used free shared buff/cache available Mem: 376G 23G 233G 287M 119G 351G Swap: 4.0G 62M 3.9G Graphics: 04:00.0 VGA compatible controller [0300]: ASPEED Technology, Inc. ASPEED Graphics Family [1a03:2000] (rev 41) Subsystem: ASPEED Technology, Inc. ASPEED Graphics Family [1a03:2000] Kernel driver in use: ast PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.8
Change History (2)
comment:1 by , 4 years ago
Component: | Unassigned → Input/Output |
---|---|
Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → accepted |
Summary: | ChimeraX bug report submission → Problem saving settings file |
comment:2 by , 4 years ago
Resolution: | → duplicate |
---|---|
Status: | accepted → closed |
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