Opened 4 years ago
Closed 4 years ago
#6407 closed enhancement (fixed)
Make combine command create shorter new chain ids
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Structure Editing | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-12.3-arm64-arm-64bit
ChimeraX Version: 1.4.dev202203161710 (2022-03-16 17:10:18 UTC)
Description
The combine command renames chains in a very strange way, for instance making some 7 characters chain IDs such as 0000008 when combining 216 copies of 1a0m (3 by 3 by 3 unit cells).
It would be nicer if it used some more obvious predictable new chain names that were only two characters of two characters suffice.
Log:
UCSF ChimeraX version: 1.4.dev202203161710 (2022-03-16)
© 2016-2022 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open 1a0m
1a0m title:
1.1 angstrom crystal structure of A-conotoxin [TYR15]-epi [more info...]
Chain information for 1a0m #1
---
Chain | Description | UniProt
A B | α-conotoxin [TYR15]-epi | CXA1_CONEP
Non-standard residues in 1a0m #1
---
NH2 — amino group
> ui tool show "Unit Cell"
> unitcell #1 cells 3,3,3
> view
> combine #3
No structures specified
> combine #2
Remapping chain ID 'A' in 1a0m #2 #2.2 to 'C'
Remapping chain ID 'B' in 1a0m #2 #2.2 to 'D'
Remapping chain ID 'A' in 1a0m #3 #2.3 to 'E'
Remapping chain ID 'B' in 1a0m #3 #2.3 to 'F'
Remapping chain ID 'A' in 1a0m #4 #2.4 to 'G'
Remapping chain ID 'B' in 1a0m #4 #2.4 to 'H'
Remapping chain ID 'A' in 1a0m #5 #2.5 to 'I'
Remapping chain ID 'B' in 1a0m #5 #2.5 to 'J'
Remapping chain ID 'A' in 1a0m #6 #2.6 to 'K'
Remapping chain ID 'B' in 1a0m #6 #2.6 to 'L'
Remapping chain ID 'A' in 1a0m #7 #2.7 to 'M'
Remapping chain ID 'B' in 1a0m #7 #2.7 to 'N'
Remapping chain ID 'A' in 1a0m #8 #2.8 to 'O'
Remapping chain ID 'B' in 1a0m #8 #2.8 to 'P'
Remapping chain ID 'A' in 1a0m #9 #2.9 to 'Q'
Remapping chain ID 'B' in 1a0m #9 #2.9 to 'R'
Remapping chain ID 'A' in 1a0m #10 #2.10 to 'S'
Remapping chain ID 'B' in 1a0m #10 #2.10 to 'T'
Remapping chain ID 'A' in 1a0m #11 #2.11 to 'U'
Remapping chain ID 'B' in 1a0m #11 #2.11 to 'V'
Remapping chain ID 'A' in 1a0m #12 #2.12 to 'W'
Remapping chain ID 'B' in 1a0m #12 #2.12 to 'X'
Remapping chain ID 'A' in 1a0m #13 #2.13 to 'Y'
Remapping chain ID 'B' in 1a0m #13 #2.13 to 'Z'
Remapping chain ID 'A' in 1a0m #14 #2.14 to 'a'
Remapping chain ID 'B' in 1a0m #14 #2.14 to 'b'
Remapping chain ID 'A' in 1a0m #15 #2.15 to 'c'
Remapping chain ID 'B' in 1a0m #15 #2.15 to 'd'
Remapping chain ID 'A' in 1a0m #16 #2.16 to 'e'
Remapping chain ID 'B' in 1a0m #16 #2.16 to 'f'
Remapping chain ID 'A' in 1a0m #17 #2.17 to 'g'
Remapping chain ID 'B' in 1a0m #17 #2.17 to 'h'
Remapping chain ID 'A' in 1a0m #18 #2.18 to 'i'
Remapping chain ID 'B' in 1a0m #18 #2.18 to 'j'
Remapping chain ID 'A' in 1a0m #19 #2.19 to 'k'
Remapping chain ID 'B' in 1a0m #19 #2.19 to 'l'
Remapping chain ID 'A' in 1a0m #20 #2.20 to 'm'
Remapping chain ID 'B' in 1a0m #20 #2.20 to 'n'
Remapping chain ID 'A' in 1a0m #21 #2.21 to 'o'
Remapping chain ID 'B' in 1a0m #21 #2.21 to 'p'
Remapping chain ID 'A' in 1a0m #22 #2.22 to 'q'
Remapping chain ID 'B' in 1a0m #22 #2.22 to 'r'
Remapping chain ID 'A' in 1a0m #23 #2.23 to 's'
Remapping chain ID 'B' in 1a0m #23 #2.23 to 't'
Remapping chain ID 'A' in 1a0m #24 #2.24 to 'u'
Remapping chain ID 'B' in 1a0m #24 #2.24 to 'v'
Remapping chain ID 'A' in 1a0m #25 #2.25 to 'w'
Remapping chain ID 'B' in 1a0m #25 #2.25 to 'x'
Remapping chain ID 'A' in 1a0m #26 #2.26 to 'y'
Remapping chain ID 'B' in 1a0m #26 #2.26 to 'z'
Remapping chain ID 'A' in 1a0m #27 #2.27 to '1'
Remapping chain ID 'B' in 1a0m #27 #2.27 to '2'
Remapping chain ID 'A' in 1a0m #28 #2.28 to '3'
Remapping chain ID 'B' in 1a0m #28 #2.28 to '4'
Remapping chain ID 'A' in 1a0m #29 #2.29 to '5'
Remapping chain ID 'B' in 1a0m #29 #2.29 to '6'
Remapping chain ID 'A' in 1a0m #30 #2.30 to '7'
Remapping chain ID 'B' in 1a0m #30 #2.30 to '8'
Remapping chain ID 'A' in 1a0m #31 #2.31 to '9'
Remapping chain ID 'B' in 1a0m #31 #2.31 to '0'
Remapping chain ID 'A' in 1a0m #32 #2.32 to '0A'
Remapping chain ID 'B' in 1a0m #32 #2.32 to '0B'
Remapping chain ID 'A' in 1a0m #33 #2.33 to '0C'
Remapping chain ID 'B' in 1a0m #33 #2.33 to '0D'
Remapping chain ID 'A' in 1a0m #34 #2.34 to '0E'
Remapping chain ID 'B' in 1a0m #34 #2.34 to '0F'
Remapping chain ID 'A' in 1a0m #35 #2.35 to '0G'
Remapping chain ID 'B' in 1a0m #35 #2.35 to '0H'
Remapping chain ID 'A' in 1a0m #36 #2.36 to '0I'
Remapping chain ID 'B' in 1a0m #36 #2.36 to '0J'
Remapping chain ID 'A' in 1a0m #37 #2.37 to '0K'
Remapping chain ID 'B' in 1a0m #37 #2.37 to '0L'
Remapping chain ID 'A' in 1a0m #38 #2.38 to '0M'
Remapping chain ID 'B' in 1a0m #38 #2.38 to '0N'
Remapping chain ID 'A' in 1a0m #39 #2.39 to '0O'
Remapping chain ID 'B' in 1a0m #39 #2.39 to '0P'
Remapping chain ID 'A' in 1a0m #40 #2.40 to '0Q'
Remapping chain ID 'B' in 1a0m #40 #2.40 to '0R'
Remapping chain ID 'A' in 1a0m #41 #2.41 to '0S'
Remapping chain ID 'B' in 1a0m #41 #2.41 to '0T'
Remapping chain ID 'A' in 1a0m #42 #2.42 to '0U'
Remapping chain ID 'B' in 1a0m #42 #2.42 to '0V'
Remapping chain ID 'A' in 1a0m #43 #2.43 to '0W'
Remapping chain ID 'B' in 1a0m #43 #2.43 to '0X'
Remapping chain ID 'A' in 1a0m #44 #2.44 to '0Y'
Remapping chain ID 'B' in 1a0m #44 #2.44 to '0Z'
Remapping chain ID 'A' in 1a0m #45 #2.45 to '0a'
Remapping chain ID 'B' in 1a0m #45 #2.45 to '0b'
Remapping chain ID 'A' in 1a0m #46 #2.46 to '0c'
Remapping chain ID 'B' in 1a0m #46 #2.46 to '0d'
Remapping chain ID 'A' in 1a0m #47 #2.47 to '0e'
Remapping chain ID 'B' in 1a0m #47 #2.47 to '0f'
Remapping chain ID 'A' in 1a0m #48 #2.48 to '0g'
Remapping chain ID 'B' in 1a0m #48 #2.48 to '0h'
Remapping chain ID 'A' in 1a0m #49 #2.49 to '0i'
Remapping chain ID 'B' in 1a0m #49 #2.49 to '0j'
Remapping chain ID 'A' in 1a0m #50 #2.50 to '0k'
Remapping chain ID 'B' in 1a0m #50 #2.50 to '0l'
Remapping chain ID 'A' in 1a0m #51 #2.51 to '0m'
Remapping chain ID 'B' in 1a0m #51 #2.51 to '0n'
Remapping chain ID 'A' in 1a0m #52 #2.52 to '0o'
Remapping chain ID 'B' in 1a0m #52 #2.52 to '0p'
Remapping chain ID 'A' in 1a0m #53 #2.53 to '0q'
Remapping chain ID 'B' in 1a0m #53 #2.53 to '0r'
Remapping chain ID 'A' in 1a0m #54 #2.54 to '0s'
Remapping chain ID 'B' in 1a0m #54 #2.54 to '0t'
Remapping chain ID 'A' in 1a0m #55 #2.55 to '0u'
Remapping chain ID 'B' in 1a0m #55 #2.55 to '0v'
Remapping chain ID 'A' in 1a0m #56 #2.56 to '0w'
Remapping chain ID 'B' in 1a0m #56 #2.56 to '0x'
Remapping chain ID 'A' in 1a0m #57 #2.57 to '0y'
Remapping chain ID 'B' in 1a0m #57 #2.57 to '0z'
Remapping chain ID 'A' in 1a0m #58 #2.58 to '01'
Remapping chain ID 'B' in 1a0m #58 #2.58 to '02'
Remapping chain ID 'A' in 1a0m #59 #2.59 to '03'
Remapping chain ID 'B' in 1a0m #59 #2.59 to '04'
Remapping chain ID 'A' in 1a0m #60 #2.60 to '05'
Remapping chain ID 'B' in 1a0m #60 #2.60 to '06'
Remapping chain ID 'A' in 1a0m #61 #2.61 to '07'
Remapping chain ID 'B' in 1a0m #61 #2.61 to '08'
Remapping chain ID 'A' in 1a0m #62 #2.62 to '09'
Remapping chain ID 'B' in 1a0m #62 #2.62 to '00'
Remapping chain ID 'A' in 1a0m #63 #2.63 to '00A'
Remapping chain ID 'B' in 1a0m #63 #2.63 to '00B'
Remapping chain ID 'A' in 1a0m #64 #2.64 to '00C'
Remapping chain ID 'B' in 1a0m #64 #2.64 to '00D'
Remapping chain ID 'A' in 1a0m #65 #2.65 to '00E'
Remapping chain ID 'B' in 1a0m #65 #2.65 to '00F'
Remapping chain ID 'A' in 1a0m #66 #2.66 to '00G'
Remapping chain ID 'B' in 1a0m #66 #2.66 to '00H'
Remapping chain ID 'A' in 1a0m #67 #2.67 to '00I'
Remapping chain ID 'B' in 1a0m #67 #2.67 to '00J'
Remapping chain ID 'A' in 1a0m #68 #2.68 to '00K'
Remapping chain ID 'B' in 1a0m #68 #2.68 to '00L'
Remapping chain ID 'A' in 1a0m #69 #2.69 to '00M'
Remapping chain ID 'B' in 1a0m #69 #2.69 to '00N'
Remapping chain ID 'A' in 1a0m #70 #2.70 to '00O'
Remapping chain ID 'B' in 1a0m #70 #2.70 to '00P'
Remapping chain ID 'A' in 1a0m #71 #2.71 to '00Q'
Remapping chain ID 'B' in 1a0m #71 #2.71 to '00R'
Remapping chain ID 'A' in 1a0m #72 #2.72 to '00S'
Remapping chain ID 'B' in 1a0m #72 #2.72 to '00T'
Remapping chain ID 'A' in 1a0m #73 #2.73 to '00U'
Remapping chain ID 'B' in 1a0m #73 #2.73 to '00V'
Remapping chain ID 'A' in 1a0m #74 #2.74 to '00W'
Remapping chain ID 'B' in 1a0m #74 #2.74 to '00X'
Remapping chain ID 'A' in 1a0m #75 #2.75 to '00Y'
Remapping chain ID 'B' in 1a0m #75 #2.75 to '00Z'
Remapping chain ID 'A' in 1a0m #76 #2.76 to '00a'
Remapping chain ID 'B' in 1a0m #76 #2.76 to '00b'
Remapping chain ID 'A' in 1a0m #77 #2.77 to '00c'
Remapping chain ID 'B' in 1a0m #77 #2.77 to '00d'
Remapping chain ID 'A' in 1a0m #78 #2.78 to '00e'
Remapping chain ID 'B' in 1a0m #78 #2.78 to '00f'
Remapping chain ID 'A' in 1a0m #79 #2.79 to '00g'
Remapping chain ID 'B' in 1a0m #79 #2.79 to '00h'
Remapping chain ID 'A' in 1a0m #80 #2.80 to '00i'
Remapping chain ID 'B' in 1a0m #80 #2.80 to '00j'
Remapping chain ID 'A' in 1a0m #81 #2.81 to '00k'
Remapping chain ID 'B' in 1a0m #81 #2.81 to '00l'
Remapping chain ID 'A' in 1a0m #82 #2.82 to '00m'
Remapping chain ID 'B' in 1a0m #82 #2.82 to '00n'
Remapping chain ID 'A' in 1a0m #83 #2.83 to '00o'
Remapping chain ID 'B' in 1a0m #83 #2.83 to '00p'
Remapping chain ID 'A' in 1a0m #84 #2.84 to '00q'
Remapping chain ID 'B' in 1a0m #84 #2.84 to '00r'
Remapping chain ID 'A' in 1a0m #85 #2.85 to '00s'
Remapping chain ID 'B' in 1a0m #85 #2.85 to '00t'
Remapping chain ID 'A' in 1a0m #86 #2.86 to '00u'
Remapping chain ID 'B' in 1a0m #86 #2.86 to '00v'
Remapping chain ID 'A' in 1a0m #87 #2.87 to '00w'
Remapping chain ID 'B' in 1a0m #87 #2.87 to '00x'
Remapping chain ID 'A' in 1a0m #88 #2.88 to '00y'
Remapping chain ID 'B' in 1a0m #88 #2.88 to '00z'
Remapping chain ID 'A' in 1a0m #89 #2.89 to '001'
Remapping chain ID 'B' in 1a0m #89 #2.89 to '002'
Remapping chain ID 'A' in 1a0m #90 #2.90 to '003'
Remapping chain ID 'B' in 1a0m #90 #2.90 to '004'
Remapping chain ID 'A' in 1a0m #91 #2.91 to '005'
Remapping chain ID 'B' in 1a0m #91 #2.91 to '006'
Remapping chain ID 'A' in 1a0m #92 #2.92 to '007'
Remapping chain ID 'B' in 1a0m #92 #2.92 to '008'
Remapping chain ID 'A' in 1a0m #93 #2.93 to '009'
Remapping chain ID 'B' in 1a0m #93 #2.93 to '000'
Remapping chain ID 'A' in 1a0m #94 #2.94 to '000A'
Remapping chain ID 'B' in 1a0m #94 #2.94 to '000B'
Remapping chain ID 'A' in 1a0m #95 #2.95 to '000C'
Remapping chain ID 'B' in 1a0m #95 #2.95 to '000D'
Remapping chain ID 'A' in 1a0m #96 #2.96 to '000E'
Remapping chain ID 'B' in 1a0m #96 #2.96 to '000F'
Remapping chain ID 'A' in 1a0m #97 #2.97 to '000G'
Remapping chain ID 'B' in 1a0m #97 #2.97 to '000H'
Remapping chain ID 'A' in 1a0m #98 #2.98 to '000I'
Remapping chain ID 'B' in 1a0m #98 #2.98 to '000J'
Remapping chain ID 'A' in 1a0m #99 #2.99 to '000K'
Remapping chain ID 'B' in 1a0m #99 #2.99 to '000L'
Remapping chain ID 'A' in 1a0m #100 #2.100 to '000M'
Remapping chain ID 'B' in 1a0m #100 #2.100 to '000N'
Remapping chain ID 'A' in 1a0m #101 #2.101 to '000O'
Remapping chain ID 'B' in 1a0m #101 #2.101 to '000P'
Remapping chain ID 'A' in 1a0m #102 #2.102 to '000Q'
Remapping chain ID 'B' in 1a0m #102 #2.102 to '000R'
Remapping chain ID 'A' in 1a0m #103 #2.103 to '000S'
Remapping chain ID 'B' in 1a0m #103 #2.103 to '000T'
Remapping chain ID 'A' in 1a0m #104 #2.104 to '000U'
Remapping chain ID 'B' in 1a0m #104 #2.104 to '000V'
Remapping chain ID 'A' in 1a0m #105 #2.105 to '000W'
Remapping chain ID 'B' in 1a0m #105 #2.105 to '000X'
Remapping chain ID 'A' in 1a0m #106 #2.106 to '000Y'
Remapping chain ID 'B' in 1a0m #106 #2.106 to '000Z'
Remapping chain ID 'A' in 1a0m #107 #2.107 to '000a'
Remapping chain ID 'B' in 1a0m #107 #2.107 to '000b'
Remapping chain ID 'A' in 1a0m #108 #2.108 to '000c'
Remapping chain ID 'B' in 1a0m #108 #2.108 to '000d'
Remapping chain ID 'A' in 1a0m #109 #2.109 to '000e'
Remapping chain ID 'B' in 1a0m #109 #2.109 to '000f'
Remapping chain ID 'A' in 1a0m #110 #2.110 to '000g'
Remapping chain ID 'B' in 1a0m #110 #2.110 to '000h'
Remapping chain ID 'A' in 1a0m #111 #2.111 to '000i'
Remapping chain ID 'B' in 1a0m #111 #2.111 to '000j'
Remapping chain ID 'A' in 1a0m #112 #2.112 to '000k'
Remapping chain ID 'B' in 1a0m #112 #2.112 to '000l'
Remapping chain ID 'A' in 1a0m #113 #2.113 to '000m'
Remapping chain ID 'B' in 1a0m #113 #2.113 to '000n'
Remapping chain ID 'A' in 1a0m #114 #2.114 to '000o'
Remapping chain ID 'B' in 1a0m #114 #2.114 to '000p'
Remapping chain ID 'A' in 1a0m #115 #2.115 to '000q'
Remapping chain ID 'B' in 1a0m #115 #2.115 to '000r'
Remapping chain ID 'A' in 1a0m #116 #2.116 to '000s'
Remapping chain ID 'B' in 1a0m #116 #2.116 to '000t'
Remapping chain ID 'A' in 1a0m #117 #2.117 to '000u'
Remapping chain ID 'B' in 1a0m #117 #2.117 to '000v'
Remapping chain ID 'A' in 1a0m #118 #2.118 to '000w'
Remapping chain ID 'B' in 1a0m #118 #2.118 to '000x'
Remapping chain ID 'A' in 1a0m #119 #2.119 to '000y'
Remapping chain ID 'B' in 1a0m #119 #2.119 to '000z'
Remapping chain ID 'A' in 1a0m #120 #2.120 to '0001'
Remapping chain ID 'B' in 1a0m #120 #2.120 to '0002'
Remapping chain ID 'A' in 1a0m #121 #2.121 to '0003'
Remapping chain ID 'B' in 1a0m #121 #2.121 to '0004'
Remapping chain ID 'A' in 1a0m #122 #2.122 to '0005'
Remapping chain ID 'B' in 1a0m #122 #2.122 to '0006'
Remapping chain ID 'A' in 1a0m #123 #2.123 to '0007'
Remapping chain ID 'B' in 1a0m #123 #2.123 to '0008'
Remapping chain ID 'A' in 1a0m #124 #2.124 to '0009'
Remapping chain ID 'B' in 1a0m #124 #2.124 to '0000'
Remapping chain ID 'A' in 1a0m #125 #2.125 to '0000A'
Remapping chain ID 'B' in 1a0m #125 #2.125 to '0000B'
Remapping chain ID 'A' in 1a0m #126 #2.126 to '0000C'
Remapping chain ID 'B' in 1a0m #126 #2.126 to '0000D'
Remapping chain ID 'A' in 1a0m #127 #2.127 to '0000E'
Remapping chain ID 'B' in 1a0m #127 #2.127 to '0000F'
Remapping chain ID 'A' in 1a0m #128 #2.128 to '0000G'
Remapping chain ID 'B' in 1a0m #128 #2.128 to '0000H'
Remapping chain ID 'A' in 1a0m #129 #2.129 to '0000I'
Remapping chain ID 'B' in 1a0m #129 #2.129 to '0000J'
Remapping chain ID 'A' in 1a0m #130 #2.130 to '0000K'
Remapping chain ID 'B' in 1a0m #130 #2.130 to '0000L'
Remapping chain ID 'A' in 1a0m #131 #2.131 to '0000M'
Remapping chain ID 'B' in 1a0m #131 #2.131 to '0000N'
Remapping chain ID 'A' in 1a0m #132 #2.132 to '0000O'
Remapping chain ID 'B' in 1a0m #132 #2.132 to '0000P'
Remapping chain ID 'A' in 1a0m #133 #2.133 to '0000Q'
Remapping chain ID 'B' in 1a0m #133 #2.133 to '0000R'
Remapping chain ID 'A' in 1a0m #134 #2.134 to '0000S'
Remapping chain ID 'B' in 1a0m #134 #2.134 to '0000T'
Remapping chain ID 'A' in 1a0m #135 #2.135 to '0000U'
Remapping chain ID 'B' in 1a0m #135 #2.135 to '0000V'
Remapping chain ID 'A' in 1a0m #136 #2.136 to '0000W'
Remapping chain ID 'B' in 1a0m #136 #2.136 to '0000X'
Remapping chain ID 'A' in 1a0m #137 #2.137 to '0000Y'
Remapping chain ID 'B' in 1a0m #137 #2.137 to '0000Z'
Remapping chain ID 'A' in 1a0m #138 #2.138 to '0000a'
Remapping chain ID 'B' in 1a0m #138 #2.138 to '0000b'
Remapping chain ID 'A' in 1a0m #139 #2.139 to '0000c'
Remapping chain ID 'B' in 1a0m #139 #2.139 to '0000d'
Remapping chain ID 'A' in 1a0m #140 #2.140 to '0000e'
Remapping chain ID 'B' in 1a0m #140 #2.140 to '0000f'
Remapping chain ID 'A' in 1a0m #141 #2.141 to '0000g'
Remapping chain ID 'B' in 1a0m #141 #2.141 to '0000h'
Remapping chain ID 'A' in 1a0m #142 #2.142 to '0000i'
Remapping chain ID 'B' in 1a0m #142 #2.142 to '0000j'
Remapping chain ID 'A' in 1a0m #143 #2.143 to '0000k'
Remapping chain ID 'B' in 1a0m #143 #2.143 to '0000l'
Remapping chain ID 'A' in 1a0m #144 #2.144 to '0000m'
Remapping chain ID 'B' in 1a0m #144 #2.144 to '0000n'
Remapping chain ID 'A' in 1a0m #145 #2.145 to '0000o'
Remapping chain ID 'B' in 1a0m #145 #2.145 to '0000p'
Remapping chain ID 'A' in 1a0m #146 #2.146 to '0000q'
Remapping chain ID 'B' in 1a0m #146 #2.146 to '0000r'
Remapping chain ID 'A' in 1a0m #147 #2.147 to '0000s'
Remapping chain ID 'B' in 1a0m #147 #2.147 to '0000t'
Remapping chain ID 'A' in 1a0m #148 #2.148 to '0000u'
Remapping chain ID 'B' in 1a0m #148 #2.148 to '0000v'
Remapping chain ID 'A' in 1a0m #149 #2.149 to '0000w'
Remapping chain ID 'B' in 1a0m #149 #2.149 to '0000x'
Remapping chain ID 'A' in 1a0m #150 #2.150 to '0000y'
Remapping chain ID 'B' in 1a0m #150 #2.150 to '0000z'
Remapping chain ID 'A' in 1a0m #151 #2.151 to '00001'
Remapping chain ID 'B' in 1a0m #151 #2.151 to '00002'
Remapping chain ID 'A' in 1a0m #152 #2.152 to '00003'
Remapping chain ID 'B' in 1a0m #152 #2.152 to '00004'
Remapping chain ID 'A' in 1a0m #153 #2.153 to '00005'
Remapping chain ID 'B' in 1a0m #153 #2.153 to '00006'
Remapping chain ID 'A' in 1a0m #154 #2.154 to '00007'
Remapping chain ID 'B' in 1a0m #154 #2.154 to '00008'
Remapping chain ID 'A' in 1a0m #155 #2.155 to '00009'
Remapping chain ID 'B' in 1a0m #155 #2.155 to '00000'
Remapping chain ID 'A' in 1a0m #156 #2.156 to '00000A'
Remapping chain ID 'B' in 1a0m #156 #2.156 to '00000B'
Remapping chain ID 'A' in 1a0m #157 #2.157 to '00000C'
Remapping chain ID 'B' in 1a0m #157 #2.157 to '00000D'
Remapping chain ID 'A' in 1a0m #158 #2.158 to '00000E'
Remapping chain ID 'B' in 1a0m #158 #2.158 to '00000F'
Remapping chain ID 'A' in 1a0m #159 #2.159 to '00000G'
Remapping chain ID 'B' in 1a0m #159 #2.159 to '00000H'
Remapping chain ID 'A' in 1a0m #160 #2.160 to '00000I'
Remapping chain ID 'B' in 1a0m #160 #2.160 to '00000J'
Remapping chain ID 'A' in 1a0m #161 #2.161 to '00000K'
Remapping chain ID 'B' in 1a0m #161 #2.161 to '00000L'
Remapping chain ID 'A' in 1a0m #162 #2.162 to '00000M'
Remapping chain ID 'B' in 1a0m #162 #2.162 to '00000N'
Remapping chain ID 'A' in 1a0m #163 #2.163 to '00000O'
Remapping chain ID 'B' in 1a0m #163 #2.163 to '00000P'
Remapping chain ID 'A' in 1a0m #164 #2.164 to '00000Q'
Remapping chain ID 'B' in 1a0m #164 #2.164 to '00000R'
Remapping chain ID 'A' in 1a0m #165 #2.165 to '00000S'
Remapping chain ID 'B' in 1a0m #165 #2.165 to '00000T'
Remapping chain ID 'A' in 1a0m #166 #2.166 to '00000U'
Remapping chain ID 'B' in 1a0m #166 #2.166 to '00000V'
Remapping chain ID 'A' in 1a0m #167 #2.167 to '00000W'
Remapping chain ID 'B' in 1a0m #167 #2.167 to '00000X'
Remapping chain ID 'A' in 1a0m #168 #2.168 to '00000Y'
Remapping chain ID 'B' in 1a0m #168 #2.168 to '00000Z'
Remapping chain ID 'A' in 1a0m #169 #2.169 to '00000a'
Remapping chain ID 'B' in 1a0m #169 #2.169 to '00000b'
Remapping chain ID 'A' in 1a0m #170 #2.170 to '00000c'
Remapping chain ID 'B' in 1a0m #170 #2.170 to '00000d'
Remapping chain ID 'A' in 1a0m #171 #2.171 to '00000e'
Remapping chain ID 'B' in 1a0m #171 #2.171 to '00000f'
Remapping chain ID 'A' in 1a0m #172 #2.172 to '00000g'
Remapping chain ID 'B' in 1a0m #172 #2.172 to '00000h'
Remapping chain ID 'A' in 1a0m #173 #2.173 to '00000i'
Remapping chain ID 'B' in 1a0m #173 #2.173 to '00000j'
Remapping chain ID 'A' in 1a0m #174 #2.174 to '00000k'
Remapping chain ID 'B' in 1a0m #174 #2.174 to '00000l'
Remapping chain ID 'A' in 1a0m #175 #2.175 to '00000m'
Remapping chain ID 'B' in 1a0m #175 #2.175 to '00000n'
Remapping chain ID 'A' in 1a0m #176 #2.176 to '00000o'
Remapping chain ID 'B' in 1a0m #176 #2.176 to '00000p'
Remapping chain ID 'A' in 1a0m #177 #2.177 to '00000q'
Remapping chain ID 'B' in 1a0m #177 #2.177 to '00000r'
Remapping chain ID 'A' in 1a0m #178 #2.178 to '00000s'
Remapping chain ID 'B' in 1a0m #178 #2.178 to '00000t'
Remapping chain ID 'A' in 1a0m #179 #2.179 to '00000u'
Remapping chain ID 'B' in 1a0m #179 #2.179 to '00000v'
Remapping chain ID 'A' in 1a0m #180 #2.180 to '00000w'
Remapping chain ID 'B' in 1a0m #180 #2.180 to '00000x'
Remapping chain ID 'A' in 1a0m #181 #2.181 to '00000y'
Remapping chain ID 'B' in 1a0m #181 #2.181 to '00000z'
Remapping chain ID 'A' in 1a0m #182 #2.182 to '000001'
Remapping chain ID 'B' in 1a0m #182 #2.182 to '000002'
Remapping chain ID 'A' in 1a0m #183 #2.183 to '000003'
Remapping chain ID 'B' in 1a0m #183 #2.183 to '000004'
Remapping chain ID 'A' in 1a0m #184 #2.184 to '000005'
Remapping chain ID 'B' in 1a0m #184 #2.184 to '000006'
Remapping chain ID 'A' in 1a0m #185 #2.185 to '000007'
Remapping chain ID 'B' in 1a0m #185 #2.185 to '000008'
Remapping chain ID 'A' in 1a0m #186 #2.186 to '000009'
Remapping chain ID 'B' in 1a0m #186 #2.186 to '000000'
Remapping chain ID 'A' in 1a0m #187 #2.187 to '000000A'
Remapping chain ID 'B' in 1a0m #187 #2.187 to '000000B'
Remapping chain ID 'A' in 1a0m #188 #2.188 to '000000C'
Remapping chain ID 'B' in 1a0m #188 #2.188 to '000000D'
Remapping chain ID 'A' in 1a0m #189 #2.189 to '000000E'
Remapping chain ID 'B' in 1a0m #189 #2.189 to '000000F'
Remapping chain ID 'A' in 1a0m #190 #2.190 to '000000G'
Remapping chain ID 'B' in 1a0m #190 #2.190 to '000000H'
Remapping chain ID 'A' in 1a0m #191 #2.191 to '000000I'
Remapping chain ID 'B' in 1a0m #191 #2.191 to '000000J'
Remapping chain ID 'A' in 1a0m #192 #2.192 to '000000K'
Remapping chain ID 'B' in 1a0m #192 #2.192 to '000000L'
Remapping chain ID 'A' in 1a0m #193 #2.193 to '000000M'
Remapping chain ID 'B' in 1a0m #193 #2.193 to '000000N'
Remapping chain ID 'A' in 1a0m #194 #2.194 to '000000O'
Remapping chain ID 'B' in 1a0m #194 #2.194 to '000000P'
Remapping chain ID 'A' in 1a0m #195 #2.195 to '000000Q'
Remapping chain ID 'B' in 1a0m #195 #2.195 to '000000R'
Remapping chain ID 'A' in 1a0m #196 #2.196 to '000000S'
Remapping chain ID 'B' in 1a0m #196 #2.196 to '000000T'
Remapping chain ID 'A' in 1a0m #197 #2.197 to '000000U'
Remapping chain ID 'B' in 1a0m #197 #2.197 to '000000V'
Remapping chain ID 'A' in 1a0m #198 #2.198 to '000000W'
Remapping chain ID 'B' in 1a0m #198 #2.198 to '000000X'
Remapping chain ID 'A' in 1a0m #199 #2.199 to '000000Y'
Remapping chain ID 'B' in 1a0m #199 #2.199 to '000000Z'
Remapping chain ID 'A' in 1a0m #200 #2.200 to '000000a'
Remapping chain ID 'B' in 1a0m #200 #2.200 to '000000b'
Remapping chain ID 'A' in 1a0m #201 #2.201 to '000000c'
Remapping chain ID 'B' in 1a0m #201 #2.201 to '000000d'
Remapping chain ID 'A' in 1a0m #202 #2.202 to '000000e'
Remapping chain ID 'B' in 1a0m #202 #2.202 to '000000f'
Remapping chain ID 'A' in 1a0m #203 #2.203 to '000000g'
Remapping chain ID 'B' in 1a0m #203 #2.203 to '000000h'
Remapping chain ID 'A' in 1a0m #204 #2.204 to '000000i'
Remapping chain ID 'B' in 1a0m #204 #2.204 to '000000j'
Remapping chain ID 'A' in 1a0m #205 #2.205 to '000000k'
Remapping chain ID 'B' in 1a0m #205 #2.205 to '000000l'
Remapping chain ID 'A' in 1a0m #206 #2.206 to '000000m'
Remapping chain ID 'B' in 1a0m #206 #2.206 to '000000n'
Remapping chain ID 'A' in 1a0m #207 #2.207 to '000000o'
Remapping chain ID 'B' in 1a0m #207 #2.207 to '000000p'
Remapping chain ID 'A' in 1a0m #208 #2.208 to '000000q'
Remapping chain ID 'B' in 1a0m #208 #2.208 to '000000r'
Remapping chain ID 'A' in 1a0m #209 #2.209 to '000000s'
Remapping chain ID 'B' in 1a0m #209 #2.209 to '000000t'
Remapping chain ID 'A' in 1a0m #210 #2.210 to '000000u'
Remapping chain ID 'B' in 1a0m #210 #2.210 to '000000v'
Remapping chain ID 'A' in 1a0m #211 #2.211 to '000000w'
Remapping chain ID 'B' in 1a0m #211 #2.211 to '000000x'
Remapping chain ID 'A' in 1a0m #212 #2.212 to '000000y'
Remapping chain ID 'B' in 1a0m #212 #2.212 to '000000z'
Remapping chain ID 'A' in 1a0m #213 #2.213 to '0000001'
Remapping chain ID 'B' in 1a0m #213 #2.213 to '0000002'
Remapping chain ID 'A' in 1a0m #214 #2.214 to '0000003'
Remapping chain ID 'B' in 1a0m #214 #2.214 to '0000004'
Remapping chain ID 'A' in 1a0m #215 #2.215 to '0000005'
Remapping chain ID 'B' in 1a0m #215 #2.215 to '0000006'
Remapping chain ID 'A' in 1a0m #216 #2.216 to '0000007'
Remapping chain ID 'B' in 1a0m #216 #2.216 to '0000008'
> hide #!2 models
> hide #1 models
OpenGL version: 4.1 Metal - 76.3
OpenGL renderer: Apple M1 Max
OpenGL vendor: Apple
Locale: UTF-8
Qt version: PyQt6 6.2.2, Qt 6.2.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro18,2
Chip: Apple M1 Max
Total Number of Cores: 10 (8 performance and 2 efficiency)
Memory: 32 GB
System Firmware Version: 7459.101.2
OS Loader Version: 7459.101.2
Software:
System Software Overview:
System Version: macOS 12.3 (21E230)
Kernel Version: Darwin 21.4.0
Time since boot: 1 day 17:21
Graphics/Displays:
Apple M1 Max:
Chipset Model: Apple M1 Max
Type: GPU
Bus: Built-In
Total Number of Cores: 32
Vendor: Apple (0x106b)
Metal Family: Supported, Metal GPUFamily Apple 7
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3456 x 2234 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 3.0.0
certifi: 2021.5.30
charset-normalizer: 2.0.12
ChimeraX-AddCharge: 1.2.3
ChimeraX-AddH: 2.1.11
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2.1
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.36.2
ChimeraX-AtomicLibrary: 6.1.1
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.1
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.6.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.2
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.1
ChimeraX-CommandLine: 1.2.1
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.4.dev202203161710
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-Dssp: 2.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.6
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.7
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.5.2
ChimeraX-ModelPanel: 1.3.2
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.8
ChimeraX-PDB: 2.6.6
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.7
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.8
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.0.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.16.2
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.1
cycler: 0.11.0
Cython: 0.29.26
debugpy: 1.5.1
decorator: 5.1.1
docutils: 0.17.1
entrypoints: 0.4
filelock: 3.4.2
fonttools: 4.29.1
funcparserlib: 1.0.0a0
grako: 3.16.5
html2text: 2020.1.16
idna: 3.3
ihm: 0.27
imagesize: 1.3.0
ipykernel: 6.6.1
ipython: 7.31.1
ipython-genutils: 0.2.0
jedi: 0.18.1
Jinja2: 3.0.3
jupyter-client: 7.1.0
jupyter-core: 4.9.2
kiwisolver: 1.3.2
line-profiler: 3.4.0
lxml: 4.7.1
lz4: 3.1.10
MarkupSafe: 2.1.0
matplotlib: 3.5.1
matplotlib-inline: 0.1.3
msgpack: 1.0.3
nest-asyncio: 1.5.4
networkx: 2.6.3
numpy: 1.22.1
openvr: 1.16.802
packaging: 21.0
ParmEd: 3.4.3
parso: 0.8.3
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.0.1
pip: 21.3.1
pkginfo: 1.8.2
prompt-toolkit: 3.0.28
psutil: 5.9.0
ptyprocess: 0.7.0
pycollada: 0.7.2
pydicom: 2.2.2
Pygments: 2.11.2
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.7
PyQt6: 6.2.2
PyQt6-Qt6: 6.2.3
PyQt6-sip: 13.2.0
PyQt6-WebEngine: 6.2.1
PyQt6-WebEngine-Qt6: 6.2.3
python-dateutil: 2.8.2
pytz: 2021.3
pyzmq: 22.3.0
qtconsole: 5.2.2
QtPy: 2.0.1
requests: 2.27.1
scipy: 1.7.3
setuptools: 59.8.0
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.3.2
sphinx-autodoc-typehints: 1.15.2
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-community: 1.0.0
tifffile: 2021.11.2
tinyarray: 1.2.4
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.8
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.1
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Component: | Unassigned → Structure Editing |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Make combine command create shorter new chain ids |
| Type: | defect → enhancement |
comment:2 by , 4 years ago
| Resolution: | → fixed |
|---|---|
| Status: | assigned → closed |
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next_chain_id() was only incrementing single-character chains correctly