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Opened 4 years ago
Closed 4 years ago
#6452 closed defect (can't reproduce)
Crash saving session(?)
| Reported by: | Owned by: | Greg Couch | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Sessions | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.19043
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010d
Current thread 0x000035d4 (most recent call first):
File "E:\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "E:\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "E:\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "E:\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
File "E:\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
===== Log before crash start =====
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "C:/Users/hajizade/OneDrive - Tartu Ülikool/Töölaud/peak2/complexocpr-
> peak2_deut0_d2o100.fit.pdb"
Chain information for complexocpr-peak2_deut0_d2o100.fit.pdb #1
---
Chain | Description
A | No description available
B | No description available
D | No description available
> show target m
> view
> hide atoms
> show atoms
> hide atoms
> select ::name="45D"
94 atoms, 95 bonds, 1 residue, 1 model selected
> show sel atoms
> color sel orange
> style sel ball
Changed 94 atom styles
> rainbow sel
> color bfactor sel
94 atoms, 1 residues, atom bfactor range 15.6 to 35.7
> color sel orange
> select #1
7861 atoms, 7935 bonds, 502 residues, 1 model selected
> ~select #1
Nothing selected
> select /A:13-314
4544 atoms, 4592 bonds, 302 residues, 1 model selected
> ui tool show H-Bonds
> hbonds sel color #0000ff restrict both
246 hydrogen bonds found
> ui tool show H-Bonds
Restriction atom specifier must not be blank
> hbonds color #0000ff saltOnly true reveal true
24 hydrogen bonds found
> color sel forest green
> hide sel atoms
> ui tool show "Show Sequence Viewer"
> sequence chain /A
Alignment identifier is 1/A
> select /A:13
14 atoms, 14 bonds, 1 residue, 1 model selected
> select /A:13
14 atoms, 14 bonds, 1 residue, 1 model selected
> select
> /A:20-30,33-49,58-63,65-73,76-87,93-100,103-119,133-144,147-159,196-206,210-216,234-244,261-263,279-281
2180 atoms, 2184 bonds, 4 pseudobonds, 140 residues, 2 models selected
> color (#!1 & sel) purple
> select /A:222-224,249-259,265-274,284-292,298-305
690 atoms, 692 bonds, 3 pseudobonds, 41 residues, 2 models selected
> color (#!1 & sel) hot pink
> color (#!1 & sel) magenta
> color (#!1 & sel) #ffaaffff
> select /A:123
5 atoms, 4 bonds, 1 residue, 1 model selected
> select /A:123-126
45 atoms, 46 bonds, 4 residues, 1 model selected
> select /A:88
14 atoms, 13 bonds, 1 residue, 1 model selected
> select /A:88-92
74 atoms, 73 bonds, 5 residues, 1 model selected
> select /A:13-19,88-92
167 atoms, 166 bonds, 12 residues, 1 model selected
> select /A:13-19,31-32,88-92
200 atoms, 198 bonds, 14 residues, 1 model selected
> select /A:13-19,31-32,74-75,88-92
224 atoms, 221 bonds, 16 residues, 1 model selected
> select /A:13-19,31-32,64,74-75,88-92
234 atoms, 230 bonds, 17 residues, 1 model selected
> select /A:13-19,31-32,50-57,64,74-75,88-92
341 atoms, 337 bonds, 25 residues, 1 model selected
> select /A:13-19,31-32,50-57,64,74-75,88-92,120-132
514 atoms, 513 bonds, 38 residues, 1 model selected
> select /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132
549 atoms, 549 bonds, 40 residues, 1 model selected
> select /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146
583 atoms, 582 bonds, 42 residues, 1 model selected
> select /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195
1087 atoms, 1089 bonds, 78 residues, 1 model selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209
1123 atoms, 1124 bonds, 2 pseudobonds, 81 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221
1187 atoms, 1188 bonds, 2 pseudobonds, 86 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221,225-233
1332 atoms, 1336 bonds, 2 pseudobonds, 95 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221,225-233,245-248
1393 atoms, 1396 bonds, 2 pseudobonds, 99 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221,225-233,245-248,260
1403 atoms, 1405 bonds, 2 pseudobonds, 100 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221,225-233,245-248,260,264
1423 atoms, 1425 bonds, 2 pseudobonds, 101 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221,225-233,245-248,260,264,275-278
1495 atoms, 1500 bonds, 2 pseudobonds, 105 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221,225-233,245-248,260,264,275-278,282-283
1518 atoms, 1522 bonds, 2 pseudobonds, 107 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221,225-233,245-248,260,264,275-278,282-283,293-297
1590 atoms, 1594 bonds, 2 pseudobonds, 112 residues, 2 models selected
> select
> /A:13-19,31-32,50-57,64,74-75,88-92,101-102,120-132,145-146,160-195,207-209,217-221,225-233,245-248,260,264,275-278,282-283,293-297,306-314
1674 atoms, 1678 bonds, 2 pseudobonds, 121 residues, 2 models selected
> color (#!1 & sel) light gray
> set bgColor white
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> graphics silhouettes true
> lighting full
> lighting soft
> lighting simple
> view
> select /B
1655 atoms, 1669 bonds, 9 pseudobonds, 102 residues, 2 models selected
> hide sel atoms
> color (#!1 & sel) lime
> ui tool show "Show Sequence Viewer"
> sequence chain /B
Alignment identifier is 1/B
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> select /B:8
14 atoms, 14 bonds, 1 residue, 1 model selected
> select /B:8-10
49 atoms, 51 bonds, 3 residues, 1 model selected
> select /B:8-10,43-45
99 atoms, 100 bonds, 6 residues, 1 model selected
> select /B:8-10,43-45,64-73
253 atoms, 254 bonds, 1 pseudobond, 16 residues, 2 models selected
> select /B:8-10,43-45,64-73,85-88
312 atoms, 312 bonds, 1 pseudobond, 20 residues, 2 models selected
> select /B:8-10,43-45,64-73,85-88,92-96
394 atoms, 394 bonds, 1 pseudobond, 25 residues, 2 models selected
> select /B:8-10,43-45,64-73,85-88,92-96,109
414 atoms, 413 bonds, 1 pseudobond, 26 residues, 2 models selected
> select /B:8-10,42-45,64-73,85-88,92-96,109
431 atoms, 430 bonds, 1 pseudobond, 27 residues, 2 models selected
> color (#!1 & sel) light sea green
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> select /D
1568 atoms, 1579 bonds, 2 pseudobonds, 97 residues, 2 models selected
> hide sel atoms
> color (#!1 & sel) cyan
> cartoon style (#!1 & sel) xsection rectangle modeHelix default
> ui tool show "Show Sequence Viewer"
> sequence chain /D
Alignment identifier is 1/D
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> select /D:12
9 atoms, 8 bonds, 1 residue, 1 model selected
> select /D:12-18
94 atoms, 94 bonds, 7 residues, 1 model selected
> select /D:12-18,22-23
140 atoms, 139 bonds, 9 residues, 1 model selected
> select /D:12-18,22-23,27-28
179 atoms, 177 bonds, 11 residues, 1 model selected
> select /D:12-18,22-23,27-28,42-45
246 atoms, 243 bonds, 15 residues, 1 model selected
> select /D:12-18,22-23,27-28,42-45,64-72
384 atoms, 381 bonds, 24 residues, 1 model selected
> select /D:12-18,22-23,27-28,42-45,64-72,92-96
466 atoms, 463 bonds, 29 residues, 1 model selected
> select /D:12-18,22-23,27-28,42-45,64-72,85-88,92-96
525 atoms, 521 bonds, 33 residues, 1 model selected
> color sel cornflower blue
> color sel medium blue
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> open "C:/Users/hajizade/OneDrive - Tartu Ülikool/Töölaud/damfit.pdb"
Chain information for damfit.pdb #2
---
Chain | Description
? | No description available
> select #2/?
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> show sel surfaces
> ~select #2
1 model selected
> view
> ui mousemode right "move picked models"
> ui mousemode right "contour level"
> hide #!1 models
> show #!1 models
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> color sel bychain
> coulombic sel
The following residues are missing heavy (non-hydrogen) atoms, which may
result in inaccurate electrostatics:
damfit.pdb #2/? ASP 1
damfit.pdb #2/? ASP 2
damfit.pdb #2/? ASP 3
damfit.pdb #2/? ASP 4
damfit.pdb #2/? ASP 5
damfit.pdb #2/? ASP 6
damfit.pdb #2/? ASP 7
damfit.pdb #2/? ASP 8
damfit.pdb #2/? ASP 9
damfit.pdb #2/? ASP 10
damfit.pdb #2/? ASP 11
damfit.pdb #2/? ASP 12
damfit.pdb #2/? ASP 13
damfit.pdb #2/? ASP 14
damfit.pdb #2/? ASP 15
damfit.pdb #2/? ASP 16
damfit.pdb #2/? ASP 17
damfit.pdb #2/? ASP 18
damfit.pdb #2/? ASP 19
damfit.pdb #2/? ASP 20
damfit.pdb #2/? ASP 21
damfit.pdb #2/? ASP 22
damfit.pdb #2/? ASP 23
damfit.pdb #2/? ASP 24
damfit.pdb #2/? ASP 25
damfit.pdb #2/? ASP 26
damfit.pdb #2/? ASP 27
damfit.pdb #2/? ASP 28
damfit.pdb #2/? ASP 29
damfit.pdb #2/? ASP 30
damfit.pdb #2/? ASP 31
damfit.pdb #2/? ASP 32
damfit.pdb #2/? ASP 33
damfit.pdb #2/? ASP 34
damfit.pdb #2/? ASP 35
damfit.pdb #2/? ASP 36
damfit.pdb #2/? ASP 37
damfit.pdb #2/? ASP 38
damfit.pdb #2/? ASP 39
damfit.pdb #2/? ASP 40
damfit.pdb #2/? ASP 41
damfit.pdb #2/? ASP 42
damfit.pdb #2/? ASP 43
damfit.pdb #2/? ASP 44
damfit.pdb #2/? ASP 45
damfit.pdb #2/? ASP 46
damfit.pdb #2/? ASP 47
damfit.pdb #2/? ASP 48
damfit.pdb #2/? ASP 49
damfit.pdb #2/? ASP 50
damfit.pdb #2/? ASP 51
damfit.pdb #2/? ASP 52
damfit.pdb #2/? ASP 53
damfit.pdb #2/? ASP 54
damfit.pdb #2/? ASP 55
damfit.pdb #2/? ASP 56
damfit.pdb #2/? ASP 57
damfit.pdb #2/? ASP 58
damfit.pdb #2/? ASP 59
damfit.pdb #2/? ASP 60
damfit.pdb #2/? ASP 61
damfit.pdb #2/? ASP 62
damfit.pdb #2/? ASP 63
damfit.pdb #2/? ASP 64
damfit.pdb #2/? ASP 65
damfit.pdb #2/? ASP 66
damfit.pdb #2/? ASP 67
damfit.pdb #2/? ASP 68
damfit.pdb #2/? ASP 69
damfit.pdb #2/? ASP 70
damfit.pdb #2/? ASP 71
damfit.pdb #2/? ASP 72
damfit.pdb #2/? ASP 73
damfit.pdb #2/? ASP 74
damfit.pdb #2/? ASP 75
damfit.pdb #2/? ASP 76
damfit.pdb #2/? ASP 77
damfit.pdb #2/? ASP 78
damfit.pdb #2/? ASP 79
damfit.pdb #2/? ASP 80
damfit.pdb #2/? ASP 81
damfit.pdb #2/? ASP 82
damfit.pdb #2/? ASP 83
damfit.pdb #2/? ASP 84
damfit.pdb #2/? ASP 85
damfit.pdb #2/? ASP 86
damfit.pdb #2/? ASP 87
damfit.pdb #2/? ASP 88
damfit.pdb #2/? ASP 89
damfit.pdb #2/? ASP 90
damfit.pdb #2/? ASP 91
damfit.pdb #2/? ASP 92
damfit.pdb #2/? ASP 93
damfit.pdb #2/? ASP 94
damfit.pdb #2/? ASP 95
damfit.pdb #2/? ASP 96
damfit.pdb #2/? ASP 97
damfit.pdb #2/? ASP 98
damfit.pdb #2/? ASP 99
damfit.pdb #2/? ASP 100
damfit.pdb #2/? ASP 101
damfit.pdb #2/? ASP 102
damfit.pdb #2/? ASP 103
Using Amber 20 recommended default charges and atom types for standard
residues
Coulombic values for damfit.pdb_ SES surface #2.2: minimum, 2.28, mean 7.43,
maximum 10.55
To also show corresponding color key, enter the above coulombic command and
add key true
> hide sel cartoons
> hide sel atoms
> color (#!2 & sel) light gray
> cofr sel
> preset "overall look" publication
Preset expands to these ChimeraX commands:
set bg white
graphics silhouettes t
> select [ all | model_2 ]
Expected an objects specifier or a keyword
> select [ all | model_2 ]
Expected an objects specifier or a keyword
> select [ all | damfit_2 ]
Expected an objects specifier or a keyword
> select [ all | 2 ]
Expected an objects specifier or a keyword
> ~select [ all | 2 ]
> select subtract [ all | 2 ]
Expected an objects specifier or a keyword
> select 2
Expected an objects specifier or a keyword
> select damfit
Expected an objects specifier or a keyword
> select damfit.bdb
Expected an objects specifier or a keyword
> select damfit.pdb
Expected an objects specifier or a keyword
> select 2-8
Expected an objects specifier or a keyword
> log metadata #2
No models had metadata
> log chains #2
Chain information for damfit.pdb #2
---
Chain | Description
? | No description available
> log metadata #2
No models had metadata
> log chains #2
Chain information for damfit.pdb #2
---
Chain | Description
? | No description available
> ui mousemode right translate
> ui mousemode right select
Drag select of damfit.pdb_ SES surface, 4759 of 635240 triangles
Drag select of damfit.pdb_ SES surface, 2333 of 635240 triangles
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.88991,0.29848,-0.34492,184.94,-0.15373,0.51567,0.84288,-45.684,0.42944,0.80312,-0.41302,61.966
> view matrix models
> #2,0.17882,0.33474,-0.92519,136.66,0.71381,-0.6913,-0.11216,-37.375,-0.67712,-0.64036,-0.36256,165.97
> view matrix models
> #2,0.15032,0.38429,-0.91089,137.58,0.50122,-0.8238,-0.26483,-6.5256,-0.85216,-0.41675,-0.31645,175.47
> ui mousemode right "move picked models"
> view matrix models
> #2,0.11841,0.38623,-0.91477,140.58,0.59054,-0.76802,-0.24783,-15.951,-0.79828,-0.51086,-0.31902,171.9
> view matrix models
> #2,0.016575,0.29207,-0.95625,153.26,0.50727,-0.82662,-0.24369,-8.6042,-0.86163,-0.48104,-0.16186,165.26
> view matrix models
> #2,-0.099261,0.31204,-0.94487,162.14,0.74298,-0.6084,-0.27897,-28.109,-0.66191,-0.72971,-0.17145,151.14
> view matrix models
> #2,-0.024216,0.38875,-0.92102,153.24,0.74386,-0.60851,-0.2764,-28.375,-0.6679,-0.6918,-0.27444,159.03
> ui mousemode right "translate selected atoms"
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.19065,0.10897,-0.97559,173.74,0.26323,-0.95175,-0.15775,7.2121,-0.94571,-0.28688,0.15277,148.93
> select up
1029 atoms, 102 pseudobonds, 103 residues, 3 models selected
> view matrix models
> #2,-0.099603,0.15947,-0.98217,168.99,0.32034,-0.92938,-0.18338,6.0342,-0.94205,-0.33289,0.041486,158.05
> select up
1029 atoms, 102 pseudobonds, 103 residues, 3 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> view matrix models
> #1,1,0,0,26.628,0,1,0,25.815,0,0,1,7.4438,#2,-0.099603,0.15947,-0.98217,177.38,0.32034,-0.92938,-0.18338,20.977,-0.94205,-0.33289,0.041486,160.3
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> view matrix models
> #1,1,0,0,9.2456,0,1,0,8.3781,0,0,1,2.5922,#2,-0.099603,0.15947,-0.98217,159.99,0.32034,-0.92938,-0.18338,3.5401,-0.94205,-0.33289,0.041486,155.45
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> view matrix models
> #1,1,0,0,3.4162,0,1,0,3.7325,0,0,1,0.9496,#2,-0.099603,0.15947,-0.98217,154.17,0.32034,-0.92938,-0.18338,-1.1054,-0.94205,-0.33289,0.041486,153.81
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> view matrix models
> #1,1,0,0,6.8699,0,1,0,2.9659,0,0,1,1.968,#2,-0.099603,0.15947,-0.98217,157.62,0.32034,-0.92938,-0.18338,-1.8721,-0.94205,-0.33289,0.041486,154.83
> ui mousemode right "translate selected models"
> ~select #2
7861 atoms, 7935 bonds, 502 residues, 2 models selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> view matrix models
> #1,1,0,0,5.5568,0,1,0,-2.6822,0,0,1,1.6571,#2,-0.099603,0.15947,-0.98217,156.31,0.32034,-0.92938,-0.18338,-7.5201,-0.94205,-0.33289,0.041486,154.52
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> select up
1029 atoms, 102 pseudobonds, 103 residues, 3 models selected
> select up
1029 atoms, 102 pseudobonds, 103 residues, 3 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> view matrix models
> #1,1,0,0,4.182,0,1,0,-1.9424,0,0,1,1.2461,#2,-0.099603,0.15947,-0.98217,146.22,0.32034,-0.92938,-0.18338,-15.276,-0.94205,-0.33289,0.041486,151.67
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> select up
1029 atoms, 102 pseudobonds, 103 residues, 3 models selected
> select up
1029 atoms, 102 pseudobonds, 103 residues, 3 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> view matrix models
> #1,1,0,0,1.4942,0,1,0,-6.8507,0,0,1,0.52433,#2,-0.099603,0.15947,-0.98217,131.98,0.32034,-0.92938,-0.18338,-36.309,-0.94205,-0.33289,0.041486,147.78
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> select up
8890 atoms, 7935 bonds, 102 pseudobonds, 605 residues, 4 models selected
> view sel
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> surface style solid
> surface style mesh
> surface style dot
> surface style solid
> transparency (#!2 & sel) 80
> transparency (#!2 & sel) 100
> transparency (#!2 & sel) 90
> view matrix models
> #2,-0.33877,0.065692,-0.93857,150.32,0.13899,-0.98312,-0.11898,-24.847,-0.93055,-0.17075,0.32392,124.72
> ~select #2
1 model selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> select down
24 pseudobonds, 1 model selected
> select down
24 pseudobonds, 1 model selected
> select down
24 pseudobonds, 1 model selected
> select down
24 pseudobonds, 1 model selected
> select down
24 pseudobonds, 1 model selected
> select down
24 pseudobonds, 1 model selected
> select down
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> select down
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> select down
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> ui mousemode right "translate selected models"
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> select down
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> select down
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> select down
24 pseudobonds, 1 model selected
> select down
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> select up
24 pseudobonds, 1 model selected
> ui mousemode right "rotate selected models"
> select up
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> select up
24 pseudobonds, 1 model selected
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> ui mousemode right "rotate selected models"
> ui mousemode right "move picked models"
> view matrix models
> #1,0.99672,-0.010101,-0.080348,7.6976,-0.0011825,0.99027,-0.13916,4.8791,0.080972,0.1388,0.987,0.52625
> view matrix models
> #1,0.99672,-0.010101,-0.080348,10.443,-0.0011825,0.99027,-0.13916,7.9757,0.080972,0.1388,0.987,-1.0984
> view matrix models
> #1,0.99672,-0.010101,-0.080348,6.1788,-0.0011825,0.99027,-0.13916,-0.13494,0.080972,0.1388,0.987,2.6565
> ui mousemode right "rotate selected models"
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> ui mousemode right "translate selected models"
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> ui mousemode right pivot
> ui mousemode right "move picked models"
> ui mousemode right zoom
> ui mousemode right "translate selected models"
> view matrix models #1.1,1,0,0,0,0,1,0,0,0,0,1,0
> ui mousemode right "translate selected atoms"
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #1,0.97345,0.22712,0.028454,5.2187,-0.22529,0.92868,0.29462,-18.697,0.04049,-0.29321,0.95519,-2.3669
> view matrix models
> #1,0.86478,0.17113,-0.4721,41.652,-0.34393,0.88687,-0.30852,25.146,0.36589,0.42916,0.8258,5.4447
> view matrix models
> #1,0.64588,-0.76264,-0.034831,4.3852,0.63499,0.56198,-0.53006,-14.408,0.42382,0.32024,0.84725,-1.0058
> view matrix models
> #1,0.65493,-0.75554,-0.014998,2.8155,0.6417,0.56652,-0.517,-15.481,0.39911,0.32897,0.85586,-0.19129
> ui mousemode right "move picked models"
> view matrix models
> #1,0.65493,-0.75554,-0.014998,12.307,0.6417,0.56652,-0.517,-13.471,0.39911,0.32897,0.85586,0.81368
> view matrix models
> #2,-0.33877,0.065692,-0.93857,153.76,0.13899,-0.98312,-0.11898,-23.577,-0.93055,-0.17075,0.32392,125.13
> view matrix models
> #2,-0.33877,0.065692,-0.93857,158.25,0.13899,-0.98312,-0.11898,-23.878,-0.93055,-0.17075,0.32392,125.5
> view matrix models
> #2,-0.33877,0.065692,-0.93857,158.34,0.13899,-0.98312,-0.11898,-23.761,-0.93055,-0.17075,0.32392,125.52
> view matrix models
> #2,-0.33877,0.065692,-0.93857,155.28,0.13899,-0.98312,-0.11898,-25.515,-0.93055,-0.17075,0.32392,125.11
> view matrix models
> #2,-0.33877,0.065692,-0.93857,152.39,0.13899,-0.98312,-0.11898,-25.337,-0.93055,-0.17075,0.32392,124.87
> ~select #1
Nothing selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> view matrix models
> #2,-0.33877,0.065692,-0.93857,155.87,0.13899,-0.98312,-0.11898,-26.525,-0.93055,-0.17075,0.32392,125.64
> view matrix models
> #2,-0.33877,0.065692,-0.93857,157.23,0.13899,-0.98312,-0.11898,-26.347,-0.93055,-0.17075,0.32392,125.87
> view matrix models
> #2,-0.33877,0.065692,-0.93857,158.23,0.13899,-0.98312,-0.11898,-26.043,-0.93055,-0.17075,0.32392,126.02
> ~select #1
Nothing selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> view matrix models
> #2,-0.33877,0.065692,-0.93857,155.31,0.13899,-0.98312,-0.11898,-24.521,-0.93055,-0.17075,0.32392,125.3
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> ~select #2
1 model selected
> view matrix models
> #1,0.65493,-0.75554,-0.014998,10.121,0.6417,0.56652,-0.517,-12.106,0.39911,0.32897,0.85586,0.61772
> ui mousemode right "rotate selected models"
> ui mousemode right pivot
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ui mousemode right pivot
> ~select #1
Nothing selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ~select #1
Nothing selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ui mousemode right "move picked models"
> ui mousemode right "rotate selected models"
> view matrix models
> #1,0.57588,-0.81744,-0.012518,12.47,0.57033,0.41267,-0.71023,0.6098,0.58573,0.40187,0.70386,2.9938
> view matrix models
> #1,0.50385,-0.86062,0.073936,9.4413,0.6189,0.29997,-0.72593,-3.0665,0.60257,0.41152,0.68378,3.6841
> view matrix models
> #1,0.57154,-0.82055,-0.0071511,12.267,0.57365,0.40577,-0.71153,0.3905,0.58675,0.40257,0.70261,3.0402
> view matrix models
> #1,0.57086,-0.81829,-0.067208,16.231,0.46065,0.38697,-0.79878,11.077,0.67965,0.42504,0.59785,5.8168
> ~select #1
Nothing selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> view matrix models
> #2,-0.48657,-0.04794,-0.87233,164.1,0.14205,-0.98955,-0.024854,-31.733,-0.86202,-0.13601,0.48829,106.87
> view matrix models
> #2,-0.50157,0.029215,-0.86462,164.33,0.10924,-0.98929,-0.096795,-23.521,-0.85819,-0.143,0.49301,106.23
> ui mousemode right "move picked models"
> view matrix models
> #2,-0.50157,0.029215,-0.86462,162.27,0.10924,-0.98929,-0.096795,-21.487,-0.85819,-0.143,0.49301,105.66
> view matrix models
> #2,-0.50157,0.029215,-0.86462,161.94,0.10924,-0.98929,-0.096795,-21.735,-0.85819,-0.143,0.49301,105.68
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.22107,-0.14775,-0.964,145.94,-0.25763,-0.9445,0.20384,-12.225,-0.94061,0.29342,0.17073,133.88
> view matrix models
> #2,-0.38396,-0.15267,-0.91064,156.28,-0.43784,-0.8382,0.32514,-6.1634,-0.81294,0.52356,0.25499,114.9
> view matrix models
> #2,0.29182,-0.099607,-0.95127,99.761,0.10596,-0.98507,0.13565,-38.729,-0.95059,-0.14038,-0.27691,170.9
> view matrix models
> #2,0.1412,0.33944,-0.92997,108.42,0.1677,-0.93401,-0.31545,-10.997,-0.97567,-0.11141,-0.18881,166.36
> view matrix models
> #2,0.1506,0.33714,-0.92933,107.56,0.11985,-0.93935,-0.32135,-6.3329,-0.9813,-0.062981,-0.18187,166.01
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> view matrix models
> #1,0.73701,-0.67075,0.083131,1.5979,0.57646,0.55961,-0.59543,-4.0388,0.35287,0.48676,0.79909,9.8113
> ~select #1
Nothing selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> view matrix models
> #2,-0.28852,0.21533,-0.93294,147.1,-0.098524,-0.97589,-0.19478,3.6397,-0.95239,0.03572,0.30278,126.84
> view matrix models
> #2,-0.20704,0.24853,-0.94624,140.73,-0.080205,-0.96825,-0.23676,5.1005,-0.97504,0.026874,0.2204,135
> ui mousemode right "move picked models"
> view matrix models
> #2,-0.20704,0.24853,-0.94624,138.55,-0.080205,-0.96825,-0.23676,2.9625,-0.97504,0.026874,0.2204,135.39
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.4001,0.22375,-0.88874,151.35,-0.086649,-0.97463,-0.20636,1.3136,-0.91237,-0.0055571,0.40933,116.09
> view matrix models
> #2,-0.28241,0.28399,-0.91629,142.69,-0.089215,-0.95881,-0.26968,6.131,-0.95514,0.0055883,0.29611,128.17
> view matrix models
> #2,-0.12533,0.33165,-0.93504,130,-0.046936,-0.9434,-0.32833,6.6785,-0.991,0.0027388,0.1338,143.37
> view matrix models
> #2,-0.21568,0.33621,-0.91676,136.53,-0.056427,-0.94158,-0.33204,7.7728,-0.97483,-0.019885,0.22205,135.56
> view matrix models
> #2,-0.22262,0.33576,-0.91526,137.03,-0.051427,-0.94156,-0.33289,7.3985,-0.97355,-0.027039,0.22687,135.14
> view matrix models
> #2,-0.45588,-0.21268,-0.86426,157.36,0.17142,-0.97383,0.14922,-47.682,-0.87338,-0.080125,0.48041,107.9
> view matrix models
> #2,-0.48842,0.20485,-0.84822,156.21,-0.0036682,-0.97253,-0.23276,-4.0079,-0.8726,-0.11057,0.47575,108.39
> view matrix models
> #2,-0.63879,0.1583,-0.75292,162.61,0.16181,-0.92907,-0.33262,-11.377,-0.75217,-0.33431,0.56787,92.509
> view matrix models
> #2,-0.71812,0.073949,-0.69198,165.6,0.43982,-0.72236,-0.53363,-22.192,-0.53932,-0.68755,0.48622,82.307
> view matrix models
> #2,-0.67062,0.085076,-0.7369,164.7,-0.15966,-0.98667,0.03139,-9.8589,-0.72441,0.13871,0.67527,78.926
> view matrix models
> #2,-0.67568,0.053134,-0.73528,165.24,-0.13957,-0.98858,0.056824,-13.493,-0.72386,0.14102,0.67538,78.853
> view matrix models
> #2,-0.19261,0.031713,-0.98076,141.31,0.21947,-0.97277,-0.074555,-35.287,-0.95642,-0.22961,0.1804,138.45
> view matrix models
> #2,-0.3889,-0.019865,-0.92106,154.41,0.25041,-0.96441,-0.084931,-37.283,-0.88659,-0.26367,0.38004,117.75
> view matrix models
> #2,-0.42147,-0.027634,-0.90642,156.23,0.24445,-0.966,-0.084215,-36.804,-0.87328,-0.25707,0.41389,114.02
> ~select #2
1 model selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> view matrix models
> #1,0.78198,-0.57709,0.23553,-8.465,0.60343,0.60625,-0.51801,-9.369,0.15615,0.5472,0.82231,19.036
> ui mousemode right "move picked models"
> view matrix models
> #2,-0.42147,-0.027634,-0.90642,160.41,0.24445,-0.966,-0.084215,-38.659,-0.87328,-0.25707,0.41389,114.01
> view matrix models
> #2,-0.42147,-0.027634,-0.90642,161.53,0.24445,-0.966,-0.084215,-39.134,-0.87328,-0.25707,0.41389,114.01
> ~select #1
Nothing selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> view matrix models
> #2,-0.42147,-0.027634,-0.90642,162.87,0.24445,-0.966,-0.084215,-39.288,-0.87328,-0.25707,0.41389,113.99
> view matrix models
> #1,0.78198,-0.57709,0.23553,0.14182,0.60343,0.60625,-0.51801,-15.682,0.15615,0.5472,0.82231,19.097
> view matrix models
> #2,-0.42147,-0.027634,-0.90642,167.35,0.24445,-0.966,-0.084215,-42.323,-0.87328,-0.25707,0.41389,114.02
> ~select #1
Nothing selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.46872,0.16992,-0.86685,167.22,0.15482,-0.95033,-0.27,-20.789,-0.86968,-0.26075,0.41913,113.34
> view matrix models
> #2,-0.52833,0.12241,-0.84017,170.78,0.02042,-0.98743,-0.15671,-17.181,-0.84879,-0.099948,0.51919,103
> ui mousemode right "move picked models"
> view matrix models
> #2,-0.52833,0.12241,-0.84017,170.06,0.02042,-0.98743,-0.15671,-12.649,-0.84879,-0.099948,0.51919,102.87
> view matrix models
> #2,-0.52833,0.12241,-0.84017,169.1,0.02042,-0.98743,-0.15671,-17.272,-0.84879,-0.099948,0.51919,103.03
> view matrix models
> #2,-0.52833,0.12241,-0.84017,171.35,0.02042,-0.98743,-0.15671,-15.75,-0.84879,-0.099948,0.51919,102.95
> ~select #2
1 model selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> view matrix models
> #1,0.78198,-0.57709,0.23553,4.4161,0.60343,0.60625,-0.51801,-13.676,0.15615,0.5472,0.82231,18.965
> view matrix models
> #2,-0.52833,0.12241,-0.84017,164.31,0.02042,-0.98743,-0.15671,-9.9796,-0.84879,-0.099948,0.51919,102.88
> view matrix models
> #1,0.78198,-0.57709,0.23553,51.216,0.60343,0.60625,-0.51801,-38.812,0.15615,0.5472,0.82231,6.501
> view matrix models
> #1,0.78198,-0.57709,0.23553,42.291,0.60343,0.60625,-0.51801,-34.266,0.15615,0.5472,0.82231,8.8667
> ui mousemode right "rotate selected models"
> view matrix models
> #1,0.56504,0.78287,-0.26047,113.23,-0.8124,0.58301,-0.01005,0.5066,0.14399,0.21728,0.96543,-6.7001
> view matrix models
> #1,-0.16818,0.98197,-0.086267,141.4,-0.93382,-0.13068,0.33302,-30.757,0.31575,0.13657,0.93896,-14.938
> view matrix models
> #1,-0.76683,0.24097,-0.59489,187.61,0.39846,0.90535,-0.1469,-42.157,0.50319,-0.34969,-0.79027,77.727
> view matrix models
> #1,0.27637,0.83724,-0.47185,141.93,0.92093,-0.090344,0.37911,-122.12,0.27477,-0.53932,-0.79601,85.124
> view matrix models
> #1,0.34633,0.70882,-0.61451,145.1,0.82827,0.076522,0.55507,-125.56,0.44047,-0.70122,-0.5606,58.542
> view matrix models
> #1,-0.27537,0.45889,-0.84474,184.68,0.76076,0.64123,0.10035,-81.099,0.58772,-0.61501,-0.52568,51.002
> view matrix models
> #1,0.53323,-0.67301,0.51256,34.335,-0.78239,-0.62278,-0.0037938,-26.542,0.32176,-0.399,-0.85864,89.847
> view matrix models
> #1,0.57518,-0.69572,0.43027,37.164,0.71868,0.17854,-0.67203,-38.787,0.39073,0.69577,0.60269,14.891
> view matrix models
> #1,0.57074,-0.70973,0.41296,38.205,0.70374,0.16367,-0.69135,-37.13,0.42308,0.6852,0.59288,13.748
> view matrix models
> #1,0.62407,-0.6235,0.47094,33.691,0.67451,0.12562,-0.7275,-34.18,0.39444,0.77166,0.49895,23.009
> view matrix models
> #1,0.6038,-0.66746,0.4358,36.02,0.6161,0.043855,-0.78645,-29.267,0.50581,0.74335,0.4377,21.021
> ui mousemode right "move picked models"
> view matrix models
> #1,0.6038,-0.66746,0.4358,-10.154,0.6161,0.043855,-0.78645,-5.2735,0.50581,0.74335,0.4377,33.281
> ui mousemode right "rotate selected models"
> view matrix models
> #1,0.34654,-0.92628,0.14804,15.425,0.8638,0.25358,-0.43537,-35.514,0.36573,0.27874,0.888,1.1855
> view matrix models
> #1,0.51241,-0.85566,0.072719,13.793,0.79587,0.44139,-0.41444,-29.675,0.32252,0.27024,0.90717,1.8468
> view matrix models
> #1,0.76917,-0.63692,-0.052055,14.082,0.11697,0.2204,-0.96837,34.195,0.62824,0.73876,0.24403,39.822
> view matrix models
> #1,0.76594,-0.64213,-0.031709,12.813,0.13003,0.20303,-0.9705,33.341,0.62962,0.73922,0.23901,40.09
> ~select #1
Nothing selected
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> view matrix models
> #2,-0.52593,0.19899,-0.82692,162.61,-0.0045864,-0.9729,-0.2312,-2.3585,-0.85051,-0.1178,0.51259,103.64
> view matrix models
> #2,-0.5271,-0.037603,-0.84897,165.94,0.072261,-0.99739,-0.00068779,-26.032,-0.84672,-0.06171,0.52844,101.75
> view matrix models
> #2,-0.52884,0.072354,-0.84563,165.1,0.036695,-0.99348,-0.10795,-14.983,-0.84793,-0.08812,0.52274,102.46
> view matrix models
> #2,-0.78462,0.03026,-0.61924,170.98,0.064474,-0.98941,-0.13004,-15.803,-0.61662,-0.14196,0.77436,63.891
> view matrix models
> #2,-0.45545,-0.01208,-0.89018,162.55,0.50126,-0.82983,-0.2452,-46.575,-0.73573,-0.55789,0.384,106.09
> view matrix models
> #2,-0.439,0.0098387,-0.89843,161.57,0.44551,-0.86598,-0.22717,-42.789,-0.78026,-0.49999,0.37578,110.21
> view matrix models
> #2,-0.35369,0.077631,-0.93213,156.15,0.38457,-0.89635,-0.22058,-37.739,-0.85265,-0.43649,0.28718,122.7
> transparency (#!2 & sel) 80
> transparency (#!2 & sel) 0
> transparency (#!2 & sel) 100
> ~select #2
1 model selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> view matrix models
> #1,0.66851,-0.71673,0.19846,1.0538,0.30344,0.019243,-0.95266,20.004,0.67898,0.69708,0.23035,37.395
> view matrix models
> #1,0.57422,-0.81103,0.11176,9.227,0.67281,0.3897,-0.62886,-10.966,0.46647,0.4363,0.76945,7.2996
> view matrix models
> #1,0.87062,-0.48266,-0.09514,15.212,0.33162,0.71865,-0.6112,11.18,0.36338,0.50057,0.78574,12.549
> view matrix models
> #1,0.90485,-0.41936,0.073411,3.9872,0.40307,0.78832,-0.46485,-0.26695,0.13706,0.4502,0.88234,16.135
> transparency (#!1 & sel) 0
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> transparency (#!2 & sel) 0
> ~select #2
1 model selected
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> ui mousemode right "move picked models"
> view matrix models
> #1,0.90485,-0.41936,0.073411,2.2495,0.40307,0.78832,-0.46485,6.3935,0.13706,0.4502,0.88234,17.798
> view matrix models
> #1,0.90485,-0.41936,0.073411,-1.2824,0.40307,0.78832,-0.46485,7.1143,0.13706,0.4502,0.88234,18.597
> view matrix models
> #1,0.90485,-0.41936,0.073411,-1.3276,0.40307,0.78832,-0.46485,6.1733,0.13706,0.4502,0.88234,18.416
> view matrix models
> #1,0.90485,-0.41936,0.073411,-0.10244,0.40307,0.78832,-0.46485,5.974,0.13706,0.4502,0.88234,18.037
> ui mousemode right "translate selected atoms"
> ui mousemode right translate
> ui mousemode right "move picked models"
> view matrix models
> #1,0.90485,-0.41936,0.073411,2.1762,0.40307,0.78832,-0.46485,6.4276,0.13706,0.4502,0.88234,17.829
> view matrix models
> #1,0.90485,-0.41936,0.073411,3.2044,0.40307,0.78832,-0.46485,6.3558,0.13706,0.4502,0.88234,17.569
> ui mousemode right "rotate selected models"
> view matrix models
> #1,0.91986,-0.38487,0.075672,3.1415,0.3745,0.80437,-0.46124,7.8325,0.11665,0.45261,0.88404,18.474
> view matrix models
> #1,0.91522,-0.36331,0.17429,-2.515,0.3961,0.7317,-0.55472,11.191,0.074006,0.57673,0.81358,27.866
> ui mousemode right "translate selected models"
> view matrix models
> #1,0.91522,-0.36331,0.17429,-1.4627,0.3961,0.7317,-0.55472,9.4304,0.074006,0.57673,0.81358,26.582
> ui mousemode right "rotate selected models"
> view matrix models
> #1,0.92745,-0.36562,-0.078519,14.234,0.19155,0.6448,-0.73996,29.017,0.32117,0.67123,0.66805,26.523
> view matrix models
> #1,0.86272,-0.50486,-0.028893,10.887,0.30502,0.5651,-0.76656,23.579,0.40333,0.65251,0.64152,23.947
> view matrix models
> #1,0.88201,-0.27823,0.38032,-11.259,0.46162,0.34804,-0.81595,14.444,0.094657,0.89524,0.43541,57.313
> view matrix models
> #1,0.83134,-0.4752,0.2882,-7.4344,0.52424,0.84268,-0.12275,-21.944,-0.18453,0.25313,0.94967,22.543
> view matrix models
> #1,0.7184,-0.62505,0.30533,-6.6596,0.67609,0.73067,-0.094974,-33.436,-0.16373,0.27466,0.9475,22.198
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> view matrix models
> #2,-0.21768,-0.23404,-0.94754,147.48,0.43614,-0.89183,0.12008,-67.569,-0.87315,-0.38713,0.29621,123.49
> view matrix models
> #2,-0.36375,0.1025,-0.92584,156.4,0.3784,-0.89196,-0.24741,-35.236,-0.85118,-0.44034,0.28566,122.71
> view matrix models
> #2,-0.4449,-0.3481,-0.82516,159.06,0.25395,-0.93259,0.2565,-61.467,-0.85882,-0.095435,0.50331,104.91
> view matrix models
> #2,-0.30343,-0.34186,-0.88942,151.4,0.34069,-0.91064,0.23379,-67.524,-0.88986,-0.23208,0.39279,116.75
> ui mousemode right "move picked models"
> view matrix models
> #2,-0.30343,-0.34186,-0.88942,150.96,0.34069,-0.91064,0.23379,-63.515,-0.88986,-0.23208,0.39279,116.89
> view matrix models
> #2,-0.30343,-0.34186,-0.88942,170.28,0.34069,-0.91064,0.23379,-85.828,-0.88986,-0.23208,0.39279,113.41
> view matrix models
> #2,-0.30343,-0.34186,-0.88942,179.69,0.34069,-0.91064,0.23379,-83.049,-0.88986,-0.23208,0.39279,111.97
> view matrix models
> #2,-0.30343,-0.34186,-0.88942,174.1,0.34069,-0.91064,0.23379,-75.675,-0.88986,-0.23208,0.39279,113
> view matrix models
> #2,-0.30343,-0.34186,-0.88942,176.51,0.34069,-0.91064,0.23379,-73.629,-0.88986,-0.23208,0.39279,112.66
> ui mousemode right "move picked models"
> ui mousemode right "rotate selected models"
> view matrix models
> #2,0.17917,-0.12701,-0.97559,139.2,0.38357,-0.90414,0.18815,-74.04,-0.90597,-0.40791,-0.11328,152.81
> view matrix models
> #2,0.15838,-0.081593,-0.984,141.34,0.40408,-0.90395,0.13999,-72.263,-0.90091,-0.41979,-0.1102,152.22
> view matrix models
> #2,-0.095629,0.34979,-0.93193,156.82,0.53877,-0.76905,-0.34394,-49.045,-0.83701,-0.53499,-0.11492,147.75
> view matrix models
> #2,-0.47784,0.3603,-0.80115,180.51,0.0018396,-0.9116,-0.41107,3.9122,-0.87844,-0.1979,0.43494,108.3
> view matrix models
> #2,-0.59672,0.34565,-0.72419,185.3,-0.071664,-0.92182,-0.38093,8.1803,-0.79924,-0.17541,0.57484,90.828
> view matrix models
> #2,-0.66419,0.30117,-0.68422,188.54,0.018879,-0.90821,-0.41809,2.9185,-0.74733,-0.29061,0.59753,85.373
> ui mousemode right "move picked models"
> view matrix models
> #2,-0.66419,0.30117,-0.68422,160.65,0.018879,-0.90821,-0.41809,10.328,-0.74733,-0.29061,0.59753,92.525
> view matrix models
> #2,-0.66419,0.30117,-0.68422,160.91,0.018879,-0.90821,-0.41809,14.709,-0.74733,-0.29061,0.59753,92.378
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.66071,0.23634,-0.71247,163.14,0.051959,-0.93247,-0.3575,7.4783,-0.74884,-0.27322,0.60381,91.928
> view matrix models
> #2,-0.66152,0.19913,-0.72301,164.24,0.060576,-0.94676,-0.31618,3.7528,-0.74748,-0.25295,0.61424,90.898
> view matrix models
> #2,-0.6581,0.16052,-0.73562,165.14,0.079505,-0.95673,-0.27989,-0.53118,-0.74872,-0.24268,0.61687,90.743
> view matrix models
> #2,-0.66099,0.19257,-0.72527,164.4,0.063815,-0.94858,-0.31003,3.0248,-0.74768,-0.25121,0.61471,90.868
> view matrix models
> #2,-0.36937,0.29477,-0.88129,149.76,-0.042076,-0.95269,-0.30101,11.656,-0.92833,-0.074103,0.36429,124.08
> view matrix models
> #2,-0.60892,0.25691,-0.75048,161.28,-0.11481,-0.96468,-0.23709,13.361,-0.78488,-0.058207,0.61691,92.665
> ui mousemode right "move picked models"
> view matrix models
> #2,-0.60892,0.25691,-0.75048,164.2,-0.11481,-0.96468,-0.23709,6.9062,-0.78488,-0.058207,0.61691,93.495
> view matrix models
> #2,-0.60892,0.25691,-0.75048,162.8,-0.11481,-0.96468,-0.23709,7.609,-0.78488,-0.058207,0.61691,93.832
> ui mousemode right "rotate selected models"
> ~select #2
1 model selected
> hide #!2 models
> show #!2 models
> select #1
7861 atoms, 7935 bonds, 24 pseudobonds, 502 residues, 2 models selected
> view matrix models
> #1,0.71384,-0.62967,0.3065,-6.6273,0.68086,0.72644,-0.093323,-33.864,-0.16389,0.2753,0.94728,22.234
> view matrix models
> #1,0.64687,-0.45908,0.60893,-19.106,0.6843,0.70187,-0.19778,-27.842,-0.33659,0.54463,0.76817,48.076
> view matrix models
> #1,0.42965,-0.85069,0.30287,1.908,0.88146,0.32228,-0.34521,-36.271,0.19605,0.41528,0.88831,12.328
> view matrix models
> #1,0.54472,-0.8257,0.1466,7.1617,0.76267,0.41507,-0.49603,-18.828,0.34873,0.382,0.85584,6.4885
> view matrix models
> #1,0.54391,-0.82298,0.16391,6.1442,0.69981,0.33707,-0.6298,-9.0199,0.46307,0.45727,0.75926,9.0722
> view matrix models
> #1,0.57746,-0.48781,0.65466,-19.453,0.75471,0.62478,-0.20015,-32.761,-0.31138,0.60966,0.72894,50.911
> view matrix models
> #1,0.6458,-0.56962,0.5084,-15.092,0.71554,0.68384,-0.14273,-33.277,-0.26636,0.45596,0.84921,37.514
> view matrix models
> #1,0.65472,-0.67966,0.33077,-6.5591,0.75531,0.57137,-0.32099,-26.209,0.029168,0.46,0.88744,21.25
> select #2
1029 atoms, 102 pseudobonds, 103 residues, 2 models selected
> transparency (#!2 & sel) 100
> transparency (#!2 & sel) 80
> ~select #2
1 model selected
> save "C:/Users/hajizade/OneDrive - Tartu Ülikool/Töölaud/mina.pdb"
> save "C:/Users/hajizade/OneDrive - Tartu Ülikool/Töölaud/12.jpg" width 1339
> height 800 supersample 3
> save "C:/Users/hajizade/OneDrive - Tartu Ülikool/Töölaud/12.cxs"
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "C:/Users/hajizade/OneDrive - Tartu Ülikool/Töölaud/new-
> peak2_deut0_d2o100.fit.pdb"
Chain information for new-peak2_deut0_d2o100.fit.pdb #1
---
Chain | Description
A | No description available
B | No description available
D | No description available
OpenGL version: 3.3.0 - Build 30.0.100.9955
OpenGL renderer: Intel(R) Iris(R) Xe Graphics
OpenGL vendor: Intel
Manufacturer: LENOVO
Model: 20WNS16800
OS: Microsoft Windows 10 Enterprise (Build 19043)
Memory: 34,052,562,944
MaxProcessMemory: 137,438,953,344
CPU: 8 11th Gen Intel(R) Core(TM) i7-1185G7 @ 3.00GHz
OSLanguage: en-US
Locale: ('en_US', 'cp1252')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.10.8
cftime: 1.5.1.1
charset-normalizer: 2.0.9
ChimeraX-AddCharge: 1.2.2
ChimeraX-AddH: 2.1.11
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.31
ChimeraX-AtomicLibrary: 4.2
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.6.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.2
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.4
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.2.6
ChimeraX-ModelPanel: 1.2.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6.5
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.13.7
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
comtypes: 1.1.10
cxservices: 1.1
cycler: 0.11.0
Cython: 0.29.24
decorator: 5.1.0
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.6.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.21
imagecodecs: 2021.4.28
imagesize: 1.3.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 3.0.1
jupyter-client: 6.1.12
jupyter-core: 4.9.1
kiwisolver: 1.3.2
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 2.0.1
matplotlib: 3.4.3
matplotlib-inline: 0.1.3
msgpack: 1.0.2
netCDF4: 1.5.7
networkx: 2.6.3
numexpr: 2.8.0
numpy: 1.21.2
openvr: 1.16.801
packaging: 21.3
ParmEd: 3.2.0
parso: 0.8.3
pickleshare: 0.7.5
Pillow: 8.3.2
pip: 21.2.4
pkginfo: 1.7.1
prompt-toolkit: 3.0.23
psutil: 5.8.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.10.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.6
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.2
pytz: 2021.3
pywin32: 228
pyzmq: 22.3.0
qtconsole: 5.1.1
QtPy: 1.11.3
RandomWords: 0.3.0
requests: 2.26.0
scipy: 1.7.1
setuptools: 57.5.0
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.2.0
sphinx-autodoc-typehints: 1.12.0
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.7
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.0
wheel-filename: 1.3.0
WMI: 1.5.1
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Sessions |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash saving session(?) |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | assigned → closed |
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