![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Timeline
Oct 6, 2021:
- 6:00 PM Ticket #5305 (loop modeling dimer, one loop goes crazy) closed by
- nonchimerax: Modeling long loops is unreliable, as per Ben: On Oct 4, 2021, at …
- 5:33 PM Ticket #5359 (Blast Protein results processing: ValueError: substring not found) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/16dfdbdd3a29510c516678e54aedd9 …
- 1:58 PM Ticket #5358 (crystalcontacts finds no unit cell info for PDB mmCIF restored from session) closed by
- fixed: Fixed. Made code look for mmcif tables in metadata to identify …
- 1:41 PM Ticket #5360 (Blast Protein "Default" button does not restore columns previously ...) closed by
- fixed: Fixed the problem where 'Default' was restoring the standard columns. …
- 1:05 PM Ticket #5357 (Error creating HTML widget profile) closed by
- duplicate: duplicate of #5283
- 12:57 PM Ticket #5356 (Read PDB file: Can't bond an atom to itself) closed by
- duplicate
- 12:46 PM Ticket #5355 (Read PDB file: Can't bond an atom to itself) closed by
- fixed
- 12:40 PM Ticket #5360 (Blast Protein "Default" button does not restore columns previously ...) created by
- In today's daily build UCSF ChimeraX version: 1.3.dev202110060041 …
- 12:24 PM Ticket #5359 (Blast Protein results processing: ValueError: substring not found) created by
- […]
- 12:06 PM 2021-10-7 created by
- 12:03 PM DeveloperMeetings edited by
- (diff)
- 11:50 AM Ticket #5354 (Crystal Contacts: name 'm' is not defined) closed by
- fixed: Fixed. The crystalcontacts command was trying to report that "No unit …
- 11:48 AM Ticket #5358 (crystalcontacts finds no unit cell info for PDB mmCIF restored from session) created by
- […]
- 10:47 AM Ticket #5357 (Error creating HTML widget profile) created by
- […]
- 9:39 AM Ticket #5356 (Read PDB file: Can't bond an atom to itself) created by
- […]
- 9:37 AM Ticket #5355 (Read PDB file: Can't bond an atom to itself) created by
- […]
- 8:55 AM Ticket #5353 (Crash in Qt on exit) closed by
- duplicate
- 8:54 AM Ticket #5352 (Crash in garbage collection during new-object allocation) closed by
- duplicate: Seemingly fixed by going to newer version of Python
- 8:44 AM Ticket #5346 (Cannot restore session: _pickle.UnpicklingError: invalid load key) closed by
- duplicate: As far as we know, opening a new session in an old version.
- 8:39 AM Ticket #5345 (Crash in Qt on exit) closed by
- nonchimerax
- 6:15 AM Ticket #5354 (Crystal Contacts: name 'm' is not defined) created by
- […]
- 3:23 AM Ticket #5353 (Crash in Qt on exit) created by
- […]
- 3:17 AM Ticket #5352 (Crash in garbage collection during new-object allocation) created by
- […]
- 12:04 AM Ticket #5351 (HTML widgets blank) created by
- […] chimeraxlog.png
Oct 5, 2021:
- 7:20 PM Ticket #5350 (faulthandler tracebacks with no ChimeraX crash) closed by
- not a bug: Apparently faulthandler appears not intended to guarantee that only …
- 7:13 PM Ticket #5348 (Windows crashes faulthandler sometimes reports many fatal exceptions) closed by
- not a bug: Conclusion: Be aware that the faulthandler python tracebacks in …
- 4:42 PM Ticket #5350 (faulthandler tracebacks with no ChimeraX crash) created by
- […] crash_traceback.txt
- 4:05 PM Ticket #5349 (blast results load/align structure only aligns first model in NMR ensemble) created by
- For example if you search PDB using 1t2p chain A, then hits 1ija, …
- 3:30 PM Ticket #5348 (Windows crashes faulthandler sometimes reports many fatal exceptions) created by
- How is it that the Python faulthandler module is reporting many fatal …
- 3:02 PM Ticket #5347 (Saving a session registers all commands reducing reliability) created by
- When saving a session it calls core.commands.list_aliases() and that …
- 1:21 PM Ticket #5346 (Cannot restore session: _pickle.UnpicklingError: invalid load key) created by
- […]
- 1:21 PM Ticket #5345 (Crash in Qt on exit) created by
- […]
- 12:01 PM Ticket #3761 (Warning when quitting about WebEnginePage profile released too soon) reopened by
- Unfortunately this fix was not a real fix. It simply made the …
- 11:55 AM Ticket #5344 (Logger: RuntimeError: wrapped C/C++ object of type QTimer has been deleted) closed by
- fixed: Fixed. The "--exit" option was not cleaning up the gui by calling …
- 10:35 AM Ticket #5344 (Logger: RuntimeError: wrapped C/C++ object of type QTimer has been deleted) created by
- Begin forwarded message: From: Guillaume Gaullier via ChimeraX-users …
- 9:39 AM Ticket #5341 (Crash in Qt on exit) closed by
- can't reproduce: I guess there's a remote chance that this is the destroyed-signal bug, …
- 9:35 AM Ticket #5340 (Crash opening session) closed by
- can't reproduce: Possibly the destroyed-signal bug fixed a few days ago.
- 9:32 AM Ticket #5339 (Crash in garbage collection during new-object allocation) closed by
- duplicate: Hi Samuel, Thanks for reporting this problem. We have not had this …
- 9:28 AM Ticket #5338 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) closed by
- duplicate
- 9:27 AM Ticket #5337 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) closed by
- duplicate
- 9:26 AM Ticket #5336 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) closed by
- duplicate
- 9:25 AM Ticket #5335 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) closed by
- duplicate
- 9:22 AM Ticket #5334 (Unknown crash) closed by
- can't reproduce
- 9:21 AM Ticket #5333 (Unknown crash) closed by
- can't reproduce
- 9:19 AM Ticket #5332 (Crash saving session) closed by
- can't reproduce: The information you provided _was_ helpful -- it was the automatic …
- 9:08 AM ChangeLog edited by
- (diff)
- 8:55 AM Ticket #5343 (Session tries to restore non-StateManager as StateManager) created by
- […]
- 7:22 AM Ticket #5342 (Crash with largely trashed stack) created by
- […]
- 7:13 AM Ticket #5341 (Crash in Qt on exit) created by
- […]
- 3:19 AM Ticket #5340 (Crash opening session) created by
- […]
- 3:00 AM Ticket #5339 (Crash in garbage collection during new-object allocation) created by
- […]
- 12:51 AM Ticket #5326 (Blastprotein: Some NR results don't have all the columns) closed by
- fixed: Should be fixed by …
Oct 4, 2021:
- 11:59 PM Ticket #5338 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) created by
- […]
- 11:58 PM Ticket #5337 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) created by
- […]
- 11:58 PM Ticket #5336 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) created by
- […]
- 11:58 PM Ticket #5335 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) created by
- […]
- 8:10 PM Ticket #5334 (Unknown crash) created by
- […]
- 7:33 PM Ticket #5333 (Unknown crash) created by
- […]
- 5:49 PM Ticket #5332 (Crash saving session) created by
- […]
- 5:07 PM Ticket #5327 (Blastprotein: Parse Description for PDB, NR blast hits into Title + Species) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/7b77976a437db3c07328674a7d08e6 …
- 11:19 AM Ticket #5330 (Graphics driver crash, macOS 11.2.3, Intel Iris Plus Graphics 650) closed by
- nonchimerax: Apple graphics driver crash. For more info …
- 11:17 AM Ticket #5329 (Graphics driver crash, macOS 10.15.7, AMD Radeon Pro 5500M) closed by
- nonchimerax: Apple graphics driver crash. For more info …
- 10:49 AM Ticket #5321 (Crash in garbage collection) closed by
- fixed: Hi Juyong, As Tom mentioned, this bug has not been reported in recent …
- 10:29 AM Ticket #5331 (Unknown crash) closed by
- can't reproduce
- 10:26 AM Ticket #5328 (Crash in AtomSearchTree implementation) closed by
- can't reproduce: If the Python stack trace is to be believed, the user was opening a …
- 9:37 AM Ticket #5325 (Can't save settings file (in use by another process)) closed by
- duplicate: dup of #3187
Oct 3, 2021:
- 11:16 PM Ticket #5331 (Unknown crash) created by
- […]
- 3:08 PM Ticket #5330 (Graphics driver crash, macOS 11.2.3, Intel Iris Plus Graphics 650) created by
- […]
- 2:50 PM Ticket #5329 (Graphics driver crash, macOS 10.15.7, AMD Radeon Pro 5500M) created by
- […]
Oct 2, 2021:
Oct 1, 2021:
- 5:22 PM Ticket #5194 (Meta: Rewrite BLAST GUI in Qt) closed by
- fixed
- 5:20 PM Ticket #5327 (Blastprotein: Parse Description for PDB, NR blast hits into Title + Species) created by
- From Elaine: […]
- 5:18 PM Ticket #5326 (Blastprotein: Some NR results don't have all the columns) created by
- Spinoff of #5228
- 5:18 PM Ticket #5325 (Can't save settings file (in use by another process)) created by
- […]
- 4:34 PM Ticket #5089 (Crash in save dialog) closed by
- can't reproduce: Failed to reproduce this on rbvi-gassho
- 3:42 PM Ticket #5323 (Crash showing open dialog) closed by
- can't reproduce: Same weird behavior where the same thread is reported a bazillion …
- 3:29 PM Ticket #5324 (Shorten blast results column titles if they're the longest thing in ...) created by
- Split off from #5228
- 2:46 PM Ticket #5323 (Crash showing open dialog) created by
- […]
- 2:26 PM Ticket #5322 (OpenMMException: Error compiling program: nvrtc: error: invalid value ...) created by
- […]
Sep 30, 2021:
- 8:24 PM Ticket #5320 (Tile command layout is wrong if one model is rotated) closed by
- fixed
- 8:24 PM Ticket #5320 (Tile command layout is wrong if one model is rotated) reopened by
- 8:22 PM Ticket #5320 (Tile command layout is wrong if one model is rotated) closed by
- fixed: Fixed. The tile command did not handle models with different …
- 7:41 PM 2021-9-30 edited by
- (diff)
- 7:30 PM Dev2021-9-30 edited by
- (diff)
- 7:02 PM Ticket #5321 (Crash in garbage collection) created by
- […]
- 5:40 PM Ticket #5320 (Tile command layout is wrong if one model is rotated) created by
- […]
- 2:02 PM Ticket #5319 (bundle_info.xml needs a doctype) created by
- Would like to be able valididate bundle_info.xml files, but there's no …
- 9:52 AM Ticket #5317 (Crash in garbage collection) closed by
- duplicate: Hi Yen-Li, Looking at the log in your report, this looks like a bug …
- 9:28 AM Ticket #5318 (Hang opening MRC files) created by
- Hi ChimeraX heroes, I feel bad for contacting you so often with all …
- 12:46 AM Ticket #5316 (Cannot save session in today's daily build if blastprotein was used) closed by
- fixed: Tracebacks were caused by the same bad variable name as #5315; the …
Sep 29, 2021:
- 8:01 PM Ticket #5317 (Crash in garbage collection) created by
- […]
- 6:47 PM Ticket #5316 (Cannot save session in today's daily build if blastprotein was used) created by
- […]
- 3:30 PM Ticket #5315 (Can't save blastprotein session in latest daily build) closed by
- fixed: Fixed in …
- 3:29 PM Ticket #5311 (crossfade command incorrectly starts from solid black when file ...) closed by
- fixed: Fixed. The crossfade command was using the rendering to the graphics …
- 3:09 PM Ticket #5315 (Can't save blastprotein session in latest daily build) created by
- […]
- 1:22 PM Ticket #5314 (Movie encode on Redhat Enterprise Linux 8 fails to find libbz2.so) created by
- Begin forwarded message: From: Guillaume Gaullier via ChimeraX-users …
- 1:16 PM Ticket #5313 (Add an undo move capability) created by
- Begin forwarded message: From: Oliver Clarke via ChimeraX-users …
- 1:06 PM Ticket #5312 (Add a trackpad twist speed preference setting) created by
- Begin forwarded message: On Sep 29, 2021, at 12:42 PM, Oliver Clarke …
- 12:08 PM Ticket #5306 (Graphics crash, macOS 10.13.6, Intel Iris Graphics 6100) closed by
- nonchimerax: Apple graphics driver crash.
- 11:58 AM Ticket #5311 (crossfade command incorrectly starts from solid black when file ...) created by
- […]
- 11:56 AM Ticket #5307 (blast protein checkboxes semi-not working again) closed by
- fixed: I believe this was fixed in …
- 9:38 AM Ticket #5309 (Unknown crash) closed by
- can't reproduce
- 9:37 AM Ticket #5308 (Crash in garbage collection) closed by
- duplicate: Duplicate of #5303
- 9:32 AM Ticket #5304 (Crash in sseq.structure) closed by
- duplicate
- 6:37 AM Ticket #5310 (Unknown crash) created by
- […]
- 1:53 AM Ticket #5309 (Unknown crash) created by
- […]
Sep 28, 2021:
- 6:34 PM Ticket #5287 (Blast NR search omits the sequence hits) closed by
- fixed
- 6:31 PM Ticket #5308 (Crash in garbage collection) created by
- […]
- 5:36 PM Ticket #5307 (blast protein checkboxes semi-not working again) created by
- I say "semi-not working" because after you click them on and off …
- 5:23 PM Ticket #5306 (Graphics crash, macOS 10.13.6, Intel Iris Graphics 6100) created by
- […]
- 2:30 PM Ticket #5303 (Crash in garbage collection) closed by
- fixed: Using del seems to work fine.
- 1:53 PM Ticket #5305 (loop modeling dimer, one loop goes crazy) created by
- (1) open 1qo7 (2) click in Log to open corresponding UniProt sequence …
- 1:38 PM Ticket #5304 (Crash in sseq.structure) created by
- […]
- 1:29 PM Ticket #5302 (Unknown crash) closed by
- can't reproduce
- 1:13 PM Ticket #5303 (Crash in garbage collection) created by
- […]
- 1:02 PM Ticket #5302 (Unknown crash) created by
- […]
- 12:55 PM Ticket #5301 (Crash in QOpenGLContext.swapBuffers() rendering side view on Windows) closed by
- can't reproduce: Possible graphics driver crash. Or maybe Qt problem with window being …
- 12:48 PM Ticket #5285 (ChimeraX hangs at startup) closed by
- can't reproduce: Eric was not able to reproduce the hang at startup. For the separate …
- 12:22 PM Dev2021-9-30 created by
- 12:21 PM 2021-9-30 created by
- 12:21 PM DeveloperMeetings edited by
- (diff)
- 12:04 PM Ticket #5300 (Graphics crash, macOS 10.15.6, Intel UHD Graphics 617) closed by
- nonchimerax: Apple graphics drive crash.
- 11:59 AM Ticket #5297 (Graphics crash, macOS 10.14.6, Intel Iris Plus Graphics 650, report 2) closed by
- duplicate: Duplicate of #5291
- 10:12 AM Ticket #5301 (Crash in QOpenGLContext.swapBuffers() rendering side view on Windows) created by
- […]
- 9:11 AM Ticket #5299 (Session code trying to take len() of 'SurfaceUpdaters') closed by
- duplicate: Hi Leonie, Thanks for reporting this problem. It was fixed about 5 …
- 8:20 AM Ticket #5300 (Graphics crash, macOS 10.15.6, Intel UHD Graphics 617) created by
- […]
- 8:09 AM Ticket #5299 (Session code trying to take len() of 'SurfaceUpdaters') created by
- […]
- 5:56 AM Ticket #5298 (RDkit dependency) created by
- […]
Sep 27, 2021:
- 7:31 PM Ticket #5297 (Graphics crash, macOS 10.14.6, Intel Iris Plus Graphics 650, report 2) created by
- […]
- 7:10 PM Ticket #5296 (PEE template incorrect) created by
- […]
- 6:27 PM Ticket #3852 (Attempt to install ISOLDE into ChimeraX 1.1.1) closed by
- duplicate: This was fixed.
- 5:41 PM Ticket #5295 (toolshed uninstall should be able to unistall user bundles that ...) created by
- For example, if the UI bundle is installed from the toolshed, then it …
- 4:59 PM Ticket #5289 (Dependency conflict trying to install ISOLDE into 1.2.5) closed by
- limitation: Incompatible version of UI bundle was installed. Unfortunately to …
- 4:40 PM Ticket #4664 (Please change the CentOS rpm so that it installs in other locations easily) closed by
- fixed: I believe this is fixed. Please file a new bug report if not.
- 4:39 PM Ticket #3244 ("toolshed uninstall" failure) closed by
- fixed: This error should be no more. Much better compatibility testing …
- 4:07 PM Ticket #3580 (Toolshed uninstall: permission denied: install-timestamp) closed by
- fixed: This was fixed in April. commit 84e390fe782a36c18bd26ad5348b06b66c5c3301
- 3:56 PM Ticket #5267 (blast jobs given nonunique names) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/a8a1667c14792e53b38e162f8f3562 …
- 1:38 PM Ticket #5216 (need better parsing of BlastProtein AlphaFold results) closed by
- fixed: Thank you! …
- 1:20 PM Ticket #5294 (Add flat transparency option) created by
- Begin forwarded message: From: David William Kastner via …
- 1:13 PM Ticket #5293 (Crash opening EM map) closed by
- can't reproduce: This is likely an Apple graphics driver crash. Details …
- 12:56 PM Ticket #5291 (Graphics crash, macOS 10.14.6, Intel Iris Plus Graphics 650) closed by
- nonchimerax: Apple graphics driver crash. Details …
- 12:49 PM Ticket #5290 (Graphics crash, macOS 10.14.6, Intel HD Graphics 4000) closed by
- nonchimerax: Apple graphics driver crash. Details …
- 12:02 PM Ticket #5288 (Cannot save movie to public desktop) closed by
- nonchimerax: I guess you are using Microsoft OneDrive. It replaces your personal …
- 10:34 AM Ticket #5293 (Crash opening EM map) created by
- […]
- 10:29 AM Ticket #5133 (Blast REST service error) closed by
- fixed
- 10:23 AM Ticket #5292 (Session code trying to take len() of 'SurfaceUpdaters') closed by
- duplicate: Hi Yen-Li, Thanks for reporting this problem. It was fixed 4 days …
- 2:56 AM Ticket #5292 (Session code trying to take len() of 'SurfaceUpdaters') created by
- […]
Sep 26, 2021:
- 10:04 PM Ticket #5291 (Graphics crash, macOS 10.14.6, Intel Iris Plus Graphics 650) created by
- […]
- 1:17 PM Ticket #5290 (Graphics crash, macOS 10.14.6, Intel HD Graphics 4000) created by
- […]
- 1:53 AM Ticket #5289 (Dependency conflict trying to install ISOLDE into 1.2.5) created by
- […]
Sep 25, 2021:
- 7:35 AM Ticket #5288 (Cannot save movie to public desktop) created by
- […]
- 12:14 AM Ticket #3967 (Toolshed json parsing error and volume session-restore error) closed by
- fixed: Something corrupted the avaailable.json file. Going to wait for …
Sep 24, 2021:
- 5:20 PM Ticket #4853 (Generic Linux build broken) closed by
- fixed
- 5:16 PM Ticket #4519 (Report hex color components) closed by
- fixed: "color show" now gives the hex representation as well.
- 12:52 PM Ticket #5275 (Crash initializing context during status bar destroy) closed by
- duplicate: Duplicate of #5273. Supposedly fixed in daily builds many months ago.
- 12:47 PM Ticket #5286 (marker connected command: ValueError: shapes (0,) and (3,3) not aligned) closed by
- duplicate: This ChimeraX error is from using the "marker connected" command when …
- 11:58 AM Ticket #5287 (Blast NR search omits the sequence hits) created by
- Blast NR search with identical query and parameters gives plenty of …
- 10:54 AM Ticket #4991 (CA-only PDB shown as stick-dots) closed by
- fixed: 100% fixed.
- 9:52 AM Ticket #5286 (marker connected command: ValueError: shapes (0,) and (3,3) not aligned) created by
- […]
- 9:12 AM Ticket #5118 (ChimeraX hangs if the blastprotein module can't connect) closed by
- can't reproduce: Can't reproduce, but testing did uncover the need to replace a nasty …
- 8:49 AM Ticket #5284 (Blast: not enough values to unpack) closed by
- duplicate: Hi Luca, Thanks for reporting this problem. It is fixed in the 1.2.5 …
- 8:37 AM Ticket #5281 (Destroying status bar: wrapped C/C++ object of type QScreen has been ...) closed by
- duplicate
- 8:30 AM Ticket #5280 (Unknown crash) closed by
- can't reproduce
- 7:43 AM Ticket #5285 (ChimeraX hangs at startup) created by
- […] ChimeraX_Renamed.rar
- 6:23 AM Ticket #5284 (Blast: not enough values to unpack) created by
- […]
- 3:20 AM Ticket #5283 (Error creating HTML widget profile) created by
- […]
- 2:34 AM Ticket #5282 (Ramachandran plot clashes: wrapped C/C++ object of type QComboBox has ...) created by
- […]
Sep 23, 2021:
- 11:08 PM Ticket #4852 (Patch of suds_jurko during linux build fails) closed by
- fixed
- 10:08 PM Ticket #5258 (Session code trying to take len() of 'SurfaceUpdaters') closed by
- fixed: Fixed by reverting session state manager API to look for subclasses of …
- 8:48 PM Ticket #5281 (Destroying status bar: wrapped C/C++ object of type QScreen has been ...) created by
- […]
- 7:33 PM Ticket #5280 (Unknown crash) created by
- […]
- 6:14 PM 2021-9-16 edited by
- (diff)
- 5:14 PM 2021-9-23 edited by
- (diff)
- 5:06 PM Dev2021-9-23 created by
- 3:32 PM DeveloperMeetings edited by
- (diff)
- 1:54 PM NTTData edited by
- (diff)
- 1:45 PM NTTData edited by
- (diff)
- 1:27 PM NTTData edited by
- (diff)
- 12:23 PM Ticket #5278 (Sequence Viewer: cannot delete structure-associated region) closed by
- not a bug: The problem was user error: trying to get the dashed outline to show …
- 11:22 AM Ticket #5265 (blast checkboxes not working) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/90e053bdb56f9050455ea3321b17c5 …
- 10:41 AM Ticket #5279 (Long running blastprotein job did not return) created by
- While debugging #5220 attempted to run a job against NR database …
- 8:39 AM Ticket #5278 (Sequence Viewer: cannot delete structure-associated region) created by
- If I draw a region but later (when it's no longer the active region) …
- 6:11 AM Ticket #5277 (ISOLDE: various dead widgets being accessed) created by
- […]
- 2:33 AM Ticket #5220 (Blastprotein: List index out of range while parsing NR results) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/69bcb3ed8957507a8f1c7d74a46f32 …
Sep 22, 2021:
- 5:21 PM Ticket #4845 (Traceback parsing atom spec @@display=True) closed by
- fixed: Fixed on 8/25
- 5:16 PM Ticket #4071 (Sphinx doesn't like indentation of some code comments) closed by
- fixed
- 5:12 PM Ticket #5276 (Crash creating profile for first HTML widget) closed by
- duplicate: There are a couple previous reports of this crash. Ticket #4200 did …
- 4:30 PM Ticket #4894 (ResiduesArg slow with outermost ~) closed by
- fixed: Sped up by two orders of magnitude for the common case where it's …
- 3:17 PM Ticket #5276 (Crash creating profile for first HTML widget) created by
- […]
- 3:15 PM Ticket #5275 (Crash initializing context during status bar destroy) created by
- […]
- 2:50 PM ChangeLog edited by
- (diff)
- 2:37 PM Ticket #5273 (Crash deleting a status bar on Windows) closed by
- fixed: Believe fixed by code that avoids creating the opengl context when …
- 2:30 PM Ticket #5270 (fitmap tool: local variable 'msg' referenced before assignment) closed by
- duplicate: Fixed Duplicate of #5269.
- 2:30 PM Ticket #5268 (Saving settings: No space left on device) closed by
- nonchimerax
- 2:22 PM Ticket #5274 (Modeller: Number of residues in the alignment and pdb files are different) created by
- […]
- 2:17 PM Ticket #5269 (fitmap tool: local variable 'msg' referenced before assignment) closed by
- fixed: Fixed. Using map fitting gui and reporting realtime average map value …
- 1:43 PM Ticket #5271 (AttributeError: 'FeatureBrowser' object has no attribute 'sel_check_box') closed by
- fixed
- 10:51 AM Ticket #5243 (make session with pre-1.3 blast results openable) closed by
- fixed: Barring any new bugs, this should be fixed by …
- 9:29 AM Ticket #5273 (Crash deleting a status bar on Windows) created by
- […]
- 2:33 AM Ticket #5272 (ISOLDE: All atoms for zone mask must be from a single model!) created by
- […]
Sep 21, 2021:
- 5:54 PM Ticket #5271 (AttributeError: 'FeatureBrowser' object has no attribute 'sel_check_box') created by
- […]
- 5:38 PM Ticket #5270 (fitmap tool: local variable 'msg' referenced before assignment) created by
- […]
- 5:38 PM Ticket #5269 (fitmap tool: local variable 'msg' referenced before assignment) created by
- […]
- 4:20 PM Ticket #5262 (seq-view status bar destruction: wrapped C/C++ object of type QScreen ...) closed by
- duplicate: Fixed 4 months ago cleanup of status line after a screen has been …
- 4:13 PM Ticket #5261 (Crash in QOpenGLFunctions::initializeOpenGLFunctions() closed by
- nonchimerax: The Qt window toolkit used by ChimeraX is trying to resize one of the …
- 4:00 PM Ticket #5260 (Save movie to desktop: access denied) closed by
- can't reproduce: Trying to record a movie to the desktop movie encode …
- 3:38 PM 2021-9-23 created by
- 3:37 PM DeveloperMeetings edited by
- (diff)
- 1:48 PM Ticket #5268 (Saving settings: No space left on device) created by
- […]
- 12:30 PM Ticket #5267 (blast jobs given nonunique names) created by
- If I use alphafold search it always gives the name None. If I use the …
- 12:27 PM Ticket #5266 (blast results make window too tall for screen) created by
- in daily build UCSF ChimeraX version: 1.3.dev202109202344 (2021-09-20) …
- 12:25 PM Ticket #5265 (blast checkboxes not working) created by
- in daily build, UCSF ChimeraX version: 1.3.dev202109202344 …
- 9:06 AM Ticket #5264 (Crash processing atom spec) closed by
- can't reproduce: Possibly a large atom spec, but impossible to tell.
- 6:00 AM Ticket #5264 (Crash processing atom spec) created by
- […]
- 5:57 AM Ticket #5263 (Cannot save PDB) created by
- […]
- 3:15 AM Ticket #5262 (seq-view status bar destruction: wrapped C/C++ object of type QScreen ...) created by
- […]
- 3:06 AM Ticket #5261 (Crash in QOpenGLFunctions::initializeOpenGLFunctions() created by
- […]
Sep 20, 2021:
- 6:37 PM Ticket #5260 (Save movie to desktop: access denied) created by
- […]
- 1:38 PM Ticket #5259 (no 'clip model') closed by
- not a bug: Hi Lorena, The 'clip model' command was added July 27, 2020 but the …
- 1:20 PM Ticket #5259 (no 'clip model') created by
- […]
- 12:20 PM Ticket #5258 (Session code trying to take len() of 'SurfaceUpdaters') created by
- […]
- 11:57 AM Ticket #5257 (access violation in ctypes/numpy) closed by
- can't reproduce: Have seen this crash in numpy on Mac where the C++ stack trace showed …
- 11:50 AM Ticket #5256 (Error in toolshed error message) closed by
- duplicate: Hi, Thanks for reporting this problem. Please upgrade to the 1.2 …
- 11:42 AM Ticket #5255 (unhashable type: 'Color') closed by
- duplicate: User has updated to newest daily build.
- 11:41 AM Ticket #5254 ('MultiColorButton' object has no attribute 'delayed_cmd_text') closed by
- not a bug: Problem occurs due to previous "unhashable type: 'Color'" bug.
- 11:37 AM Ticket #5253 (unhashable type: 'Color') closed by
- duplicate: Hi Yen-Li, Thanks for reporting the problem. This bug was in the …
- 11:34 AM Ticket #5252 (Opening new session in old version) closed by
- not a bug: Followup to #5251
- 11:33 AM Ticket #5251 (Opening new session in old version) closed by
- not a bug: As per #5252, the session was saved from the daily build.
- 11:29 AM Ticket #5250 (Crash using 'browse' file browser) closed by
- can't reproduce: The well-worn "wrong thread" error.
- 11:11 AM Ticket #5245 (Crash opening a pdb format file) closed by
- duplicate: Probably due to a non-ASCII character in the PDB file, which is …
- 7:56 AM Ticket #5257 (access violation in ctypes/numpy) created by
- […]
- 2:51 AM Ticket #5256 (Error in toolshed error message) created by
- […]
Sep 19, 2021:
- 4:37 PM Ticket #5255 (unhashable type: 'Color') created by
- […]
- 2:41 PM Ticket #5254 ('MultiColorButton' object has no attribute 'delayed_cmd_text') created by
- […]
- 2:39 PM Ticket #5253 (unhashable type: 'Color') created by
- […]
- 2:14 AM Ticket #5252 (Opening new session in old version) created by
- […]
- 2:12 AM Ticket #5251 (Opening new session in old version) created by
- […] Ad5_mycolors.cxs
Sep 17, 2021:
- 9:14 PM Ticket #5250 (Crash using 'browse' file browser) created by
- […]
- 6:11 PM Ticket #4674 (Error in session restore: unhashable type: 'dict') closed by
- can't reproduce: I am unable to reproduce this error and we haven't seen any other …
- 6:03 PM Ticket #1964 (Make stacked icons more compact or allow unstacking) closed by
- fixed: I believe the stacking issue is taken care of. When the button labels …
- 4:34 PM Ticket #5249 (RFE: model-restriction widget for clashes/contacts) created by
- […]
- 4:30 PM Ticket #5240 (Blastprotein session restore tries to access job, which doesn't exist) closed by
- fixed: Should be fixed in …
- 4:19 PM Ticket #5124 (Crash loading OpenMM plugins) closed by
- can't reproduce: Reporter did not respond to request to do simple test opening a map …
- 4:15 PM Ticket #5248 (Out of memory trying to safe GLTF file of virus surface) closed by
- not a bug: Out of memory. Same user reported OpenGL out of memory error today, #5246.
- 4:04 PM Ticket #5237 (Windows fatal exception 0x8001010E in open file dialog, RPC_E_WRONG_THREAD) closed by
- duplicate: Have seen this crash report many times.
- 2:33 PM Ticket #5246 (OpenGL error in glBufferData opening virus PDB file) closed by
- can't reproduce: The OpenGL error code 1285 is out of memory. The file appears to be …
- 1:13 PM Ticket #5242 (Saving session gives OpenMM SyntaxWarning "is" vs "==") closed by
- can't reproduce: not reproducible in a couple of tries, and completely mysterious
- 1:01 PM Ticket #5244 (Crash in garbage collection when closing a tool) closed by
- can't reproduce: I don't think we have any info in this bug report that can help us …
- 7:59 AM Ticket #5248 (Out of memory trying to safe GLTF file of virus surface) created by
- […]
- 1:13 AM Ticket #5196 (Blastprotein sometimes requests invalid ID from AlphaFold) closed by
- fixed
Sep 16, 2021:
- 11:55 PM Ticket #5247 (Make download and older releases pages easier to maintain) created by
- With the changes to the download page to emphasis the download page …
- 11:26 PM Ticket #5210 (Session restore is unaware of BlastProteinResults) closed by
- fixed: Fixed the Qt bug (#5238) that was holding up closure of this ticket.
- 10:21 PM Ticket #5246 (OpenGL error in glBufferData opening virus PDB file) created by
- […]
- 10:20 PM Ticket #5245 (Crash opening a pdb format file) created by
- […]
- 9:30 PM Ticket #5238 (Restoring session with Blastresults on macOS shows Qt error) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/112f044a6875761cb18a6105858992 …
- 6:13 PM Ticket #5244 (Crash in garbage collection when closing a tool) created by
- […] 6zgg.pdb
- 5:36 PM Ticket #5243 (make session with pre-1.3 blast results openable) created by
- Another issue to consider is enabling new ChimeraX to load blast …
- 5:19 PM Ticket #5242 (Saving session gives OpenMM SyntaxWarning "is" vs "==") created by
- […]
- 3:43 PM Ticket #5241 (Blastprotein: Ambiguous behavior of sequence-only hits) created by
- Some rows are sequence-only and do not have a corresponding PDB …
- 3:16 PM Ticket #5240 (Blastprotein session restore tries to access job, which doesn't exist) created by
- […] blastp.cxs
- 3:04 PM Ticket #5239 (One-time registration) created by
- As per 8/12/2021 group meeting notes 12 August 2021: …
- 2:39 PM Dev2021-9-16 edited by
- (diff)
- 1:36 PM Ticket #5238 (Restoring session with Blastresults on macOS shows Qt error) created by
- When restoring a Blast session: {{{<QNSWindow: 0x7fe052fd40f0; …
- 1:25 PM Ticket #5237 (Windows fatal exception 0x8001010E in open file dialog, RPC_E_WRONG_THREAD) created by
- […]
- 12:16 PM 2021-9-16 edited by
- (diff)
- 11:26 AM 2021-9-16 edited by
- (diff)
- 9:16 AM Ticket #5235 (Unknown crash) closed by
- can't reproduce
- 9:15 AM Ticket #5234 (Unknown crash) closed by
- can't reproduce
- 9:14 AM Ticket #5233 (Crash showing Open dialog) closed by
- can't reproduce: Another instance of the RPC_E_WRONG_THREAD crash.
- 6:35 AM Ticket #5236 (Crash in OpenMM finding clashes) created by
- […]
- 6:01 AM Ticket #5235 (Unknown crash) created by
- […]
- 5:51 AM Ticket #5234 (Unknown crash) created by
- […]
- 2:23 AM Ticket #5233 (Crash showing Open dialog) created by
- […]
Sep 15, 2021:
- 11:52 PM Dev2021-9-16 edited by
- (diff)
- 10:52 PM Ticket #5137 (Toolbar appearance changed on Mac) closed by
- fixed: Reverted in …
- 5:06 PM Ticket #4501 (Easier import for MD) closed by
- fixed: Okay added a 'slider' option, which defaults to true, to opening MD …
- 4:05 PM Ticket #5113 (Session depends on atomic bundle when no atomic models opened) closed by
- fixed: Using the new include_state StateManager method allows 1.3 sessions to …
- 2:49 PM ChangeLog edited by
- (diff)
- 12:05 PM Ticket #5230 (Crash in glClear) closed by
- nonchimerax: Probable defective Radeon graphics driver on Windows.
- 11:58 AM Ticket #5232 (Add "interfaces select" command) closed by
- fixed: Done. I added the "interfaces select" command that selects residues …
- 11:53 AM Ticket #5232 (Add "interfaces select" command) created by
- Begin forwarded message: From: Vorländer,Matthias Kopano via …
- 11:45 AM Ticket #5229 (Crash creating QWebEngineProfile) closed by
- limitation: Windows 7 is not supported.
- 11:42 AM Ticket #5231 (Qt crash during exit) closed by
- duplicate
- 11:42 AM ChangeLog edited by
- (diff)
- 11:33 AM Ticket #5231 (Qt crash during exit) created by
- […]
- 10:38 AM Ticket #4723 (Dead links in "toolshed list") closed by
- fixed: Fixed by limiting links to bundles that are available in the toolshed.
- 6:00 AM Ticket #5230 (Crash in glClear) created by
- […]
- 1:37 AM Ticket #5229 (Crash creating QWebEngineProfile) created by
- […]
Sep 14, 2021:
- 5:45 PM Ticket #5040 (SSL failure during registration attempt) closed by
- can't reproduce: Unable to reproduce.
- 4:39 PM Ticket #5228 (Blastprotein: Visual fixes) created by
- Paraphrased from Elaine's email: 1) Make buttons more like other …
- 4:36 PM Ticket #5227 (Blastprotein: Expose uniref databases) created by
- We have the databases on Plato and the infrastructure in place to …
- 3:26 PM Ticket #5218 (surface color value on mouseover replaced by chain info in status line) closed by
- fixed: Fixed. Made surface value status message suppress chain description …
- 3:13 PM Ticket #5222 (core/state.py: Allow NamedTuples in bundle data) closed by
- not a bug: OK, that makes sense. The only other suggestion I'd make would be to …
- 1:53 PM Dev2021-9-16 created by
- 1:50 PM DeveloperMeetings edited by
- (diff)
- 1:49 PM 2021-9-16 created by
- 1:49 PM 2021-9-9 edited by
- (diff)
- 1:45 PM DeveloperMeetings edited by
- (diff)
- 1:42 PM Ticket #5225 (Qt crash during exit) closed by
- fixed: I put in code so the user is not asked to report Mac crashes that …
- 1:41 PM Ticket #5225 (Qt crash during exit) reopened by
- 1:18 PM Ticket #5221 (Crash capturing file-history thumbnail) closed by
- can't reproduce: Crashed in glReadPixels() call via PyOpenGL. That routine is handed a …
- 11:23 AM Ticket #5210 (Session restore is unaware of BlastProteinResults) reopened by
- 11:03 AM Ticket #5029 (Crash opening PDB file) closed by
- fixed: No further feedback received from user.
- 10:08 AM Ticket #5226 (Save dialog: wrapped C/C++ object of type SaveOptionsWidget has been ...) closed by
- duplicate: Hi Daniel, Thanks for reporting this problem. It has been fixed in …
- 9:52 AM Ticket #5226 (Save dialog: wrapped C/C++ object of type SaveOptionsWidget has been ...) created by
- […]
- 9:38 AM Ticket #5225 (Qt crash during exit) closed by
- can't reproduce
- 6:59 AM Ticket #5225 (Qt crash during exit) created by
- […]
- 5:57 AM Ticket #5224 (bond types) created by
- […] grade-MNU.pdb
- 12:40 AM Ticket #5219 (Blast Protein ignores numbers input into dialog, uses defaults instead) closed by
- fixed: Should be fixed by …
- 12:40 AM Ticket #5210 (Session restore is unaware of BlastProteinResults) closed by
- fixed: Should be fixed by …
Sep 13, 2021:
- 11:22 PM Ticket #5223 (Replace Opal web services) created by
- The Opal web services use the suds_jurko pypi package from 2014. That …
- 11:12 PM Ticket #5222 (core/state.py: Allow NamedTuples in bundle data) created by
-
Would be good to have some way to register
NamedTuples with … - 7:49 PM Ticket #5221 (Crash capturing file-history thumbnail) created by
- […]
- 4:46 PM Ticket #5206 (Clicking "Coloring" in AlphaFold panel does not show the coloring panel) closed by
- nonchimerax: Does the AlphaFold coloring panel ever show? For instance if you just …
- 4:02 PM Ticket #5207 (Matchmaker: 'NoneType' object has no attribute 'setChecked') closed by
- fixed: The settings/options callback loop doesn't get broken quickly enough …
- 3:57 PM Ticket #5211 (hide_dust: local variable 'maps' referenced before assignment) closed by
- duplicate: Fixed 3 months ago. #4829
- 3:48 PM Ticket #5202 (Model draw order not consistent) closed by
- not a bug: I guess you are expecting models that are identical to each other and …
- 3:42 PM Ticket #5201 (Parse error for 'alphafold predict') closed by
- duplicate: This error is from pressing the AlphaFold tool Predict button without …
- 3:34 PM Ticket #5220 (Blastprotein: List index out of range while parsing NR results) created by
- […]
- 3:14 PM Ticket #5219 (Blast Protein ignores numbers input into dialog, uses defaults instead) created by
- Clicking the "Blast" button ignores different values for maxseq and …
- 1:59 PM Ticket #5218 (surface color value on mouseover replaced by chain info in status line) created by
- There is dueling information sent to the status line. It is very hard …
- 12:39 PM Ticket #5217 (blast protein lists same hit multiple times) created by
- Isn't there some option to consolidate multiple hits to the same entry …
- 12:14 PM Ticket #5216 (need better parsing of BlastProtein AlphaFold results) created by
- Often some of the column values are blank but I believe that to be a …
- 10:39 AM Ticket #5215 (Save dialog: wrapped C/C++ object of type SaveOptionsWidget has been ...) closed by
- duplicate: Hi Michael, Thanks for reporting this problem. It is fixed in the …
- 10:37 AM Ticket #5214 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) closed by
- duplicate: Hi Luca, Thanks for reporting this problem. It is fixed in the 1.2.5 …
- 10:35 AM Ticket #5213 (Error using saved tool positioning) closed by
- duplicate
- 10:33 AM Ticket #5212 (Crash showing Open dialog) closed by
- can't reproduce
- 9:21 AM Ticket #5209 (Failure initializing graphics) closed by
- limitation: Windows 8
- 9:20 AM Ticket #5208 (Failure initializing graphics) closed by
- limitation: Windows 8
- 9:05 AM Ticket #5204 (Open Chimera session) closed by
- duplicate
- 9:03 AM Ticket #5203 (bigalpha.py: can't set residues.numbers) closed by
- not a bug: Hi Shujun, The bigalpha.py script uses features that are only …
- 8:46 AM Ticket #5195 ('ModelMenuButton' does not have a signal with the signature value_changed()) closed by
- can't reproduce: Happened immediately after opening a session. No idea how this is …
- 6:45 AM Ticket #5215 (Save dialog: wrapped C/C++ object of type SaveOptionsWidget has been ...) created by
- […]
- 5:08 AM Ticket #5214 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) created by
- […]
Sep 12, 2021:
- 9:01 PM Ticket #5213 (Error using saved tool positioning) created by
- […]
- 5:32 PM Ticket #5212 (Crash showing Open dialog) created by
- […]
- 12:33 PM Ticket #5211 (hide_dust: local variable 'maps' referenced before assignment) created by
- […]
- 11:07 AM Ticket #5210 (Session restore is unaware of BlastProteinResults) created by
- […]
Sep 11, 2021:
- 9:17 PM Ticket #5209 (Failure initializing graphics) created by
- […]
- 8:35 PM Ticket #5208 (Failure initializing graphics) created by
- […]
- 8:10 PM Ticket #5200 (Blastprotein: List index out of range if there are no results) closed by
- fixed: Should be fixed by …
- 7:59 PM Ticket #5205 (AlphaFold cannot import BlastProtein) closed by
- fixed: Should be fixed in tomorrow's daily build by …
- 6:48 PM Ticket #5207 (Matchmaker: 'NoneType' object has no attribute 'setChecked') created by
- […]
Sep 10, 2021:
- 11:44 PM Ticket #5193 (Already installed bundle produces traceback instead of message) closed by
- duplicate: Duplicate of #4631. Please install ChimeraX 1.2.5.
- 11:43 PM Ticket #4626 (Already-installed bundle raising error) closed by
- duplicate: Duplicate of #4631
- 11:42 PM Ticket #4876 (Traceback when bundle already installed) closed by
- duplicate: Duplicate of #4631. Please install ChimeraX 1.2.5.
- 11:29 PM Ticket #4513 (Registration check failure) closed by
- fixed: It looks like the preregistration file was corrupted. Please remove …
- 10:40 PM Ticket #4639 (bundle_builder ignoring MACOSX_DEPLOYMENT_TARGET) closed by
- fixed: Fixed. Bundle builder now takes into account the …
- 10:22 PM Ticket #5206 (Clicking "Coloring" in AlphaFold panel does not show the coloring panel) created by
- […] AlphaFold_coloring.png
- 4:35 PM Ticket #4975 (Notification of new releases) closed by
- fixed: Added additional toolshed settings to control how often to check. …
- 4:26 PM Ticket #5205 (AlphaFold cannot import BlastProtein) created by
- […]
- 9:52 AM Ticket #5204 (Open Chimera session) created by
- […]
- 8:46 AM Ticket #5203 (bigalpha.py: can't set residues.numbers) created by
- […]
- 4:08 AM Ticket #5202 (Model draw order not consistent) created by
- […]
Sep 9, 2021:
- 11:52 PM Ticket #5201 (Parse error for 'alphafold predict') created by
- […]
- 11:06 PM Ticket #5200 (Blastprotein: List index out of range if there are no results) created by
- […]
- 8:38 PM Ticket #5199 (Eliminate QWebEngineUrlScheme.registerScheme warning) created by
- […]
- 6:37 PM Ticket #5197 (Graphics crash, macOS 10.15.6, Intel Iris Plus Graphics) closed by
- nonchimerax: Apple graphics driver crash.
- 6:35 PM Ticket #5198 (Transparent background not transparent when selection outline shown) closed by
- fixed: Fixed. Offscreen rendering was making a framebuffer with no alpha …
- 5:43 PM Ticket #5190 (glUniformMatrix4fv: invalid operation) closed by
- can't reproduce: Has been reported a half dozen times, including once by me #4891. Was …
- 5:29 PM Ticket #5188 (Graphics crash, macOS 10.14.6, GeForce GT 750M, report 6) closed by
- nonchimerax: Apple graphics driver crash.
- 5:25 PM Ticket #5187 (Crash on exit) closed by
- nonchimerax: ChimeraX crashed when it was shutting down in Qt window toolkit …
- 5:16 PM Ticket #5186 (UniProt ID arg: can't hand empty text to next_token()) closed by
- fixed: Fixed. Pressed AlphaFold panel Predict button without providing a …
- 4:40 PM Ticket #5198 (Transparent background not transparent when selection outline shown) created by
- […]
- 4:24 PM Ticket #5197 (Graphics crash, macOS 10.15.6, Intel Iris Plus Graphics) created by
- […]
- 4:21 PM Ticket #5099 (BLAST gui shows wrong database and chain when the blastprotein command ...) closed by
- fixed: OK, the query parameters are shown in the results window as of …
- 3:22 PM Ticket #5196 (Blastprotein sometimes requests invalid ID from AlphaFold) created by
- Screenshot attached. IDs passed to alphafold fetch are not always the …
- 3:19 PM Ticket #3014 (Blast Protein tool: threading) closed by
- fixed: As of tonight's daily build, several instances of the blastprotein …
- 2:11 PM Ticket #5177 (Blast results: wrapped C/C++ object of type HtmlView has been deleted) closed by
- fixed
- 12:36 PM Ticket #5195 ('ModelMenuButton' does not have a signal with the signature value_changed()) created by
- […]
- 12:29 PM NTTData edited by
- (diff)
- 12:06 PM Ticket #5194 (Meta: Rewrite BLAST GUI in Qt) created by
- 9:50 AM Ticket #5192 (Crash in malloc, macOS 11.5.2, ARM cpu) closed by
- can't reproduce
- 9:40 AM Ticket #5191 (Crash iterating through a Collection after pressing Coulombic toolbar icon) closed by
- can't reproduce
- 9:34 AM Ticket #5189 (Error in toolshed error message) closed by
- duplicate: Hi Kartik, ChimeraX was trying to tell you that the bundle you were …
- 9:20 AM Ticket #5193 (Already installed bundle produces traceback instead of message) created by
- […]
- 3:10 AM Ticket #5192 (Crash in malloc, macOS 11.5.2, ARM cpu) created by
- […]
Sep 8, 2021:
- 9:44 PM Ticket #5191 (Crash iterating through a Collection after pressing Coulombic toolbar icon) created by
- […]
- 6:53 PM Ticket #5190 (glUniformMatrix4fv: invalid operation) created by
- […]
- 4:16 PM Ticket #5189 (Error in toolshed error message) created by
- […]
- 3:02 PM Ticket #5188 (Graphics crash, macOS 10.14.6, GeForce GT 750M, report 6) created by
- […]
- 2:35 PM Ticket #5162 (Support 2-character chain IDs in SEQRES) closed by
- fixed: SEQRES now preserves 2-character chain IDs. I can't test whether this …
- 2:07 PM Ticket #5187 (Crash on exit) created by
- […]
- 1:19 PM Ticket #5186 (UniProt ID arg: can't hand empty text to next_token()) created by
- […]
- 1:17 PM Ticket #5185 (Missing bond) closed by
- not a bug
- 1:15 PM Ticket #5185 (Missing bond) created by
- The following bug report has been submitted: Platform: …
- 12:01 PM Ticket #5168 (self._positions is None) closed by
- fixed: Okay, I've committed a "fix", but since I've never been able to …
- 11:53 AM Ticket #5182 (Crash handling AlphaFold results) closed by
- can't reproduce: I tried running AlphaFold prediction on Windows in ChimeraX Sep 8, …
- 11:35 AM Ticket #5184 (Graphics driver crash, macOS 10.15.7, Intel Iris Plus Graphics 640) closed by
- nonchimerax: Apple graphics driver crash.
- 11:31 AM Ticket #5180 (ctypes crash) closed by
- can't reproduce: Not much info in the traceback. Thread 36 is in QFileInfoGatherer and …
- 11:16 AM Ticket #5179 (modeller refine off by one?) closed by
- fixed: Second case now also fixed.
- 10:54 AM Training edited by
- (diff)
- 10:16 AM Ticket #5184 (Graphics driver crash, macOS 10.15.7, Intel Iris Plus Graphics 640) created by
- […]
- 8:52 AM Ticket #5181 (Color chooser crash on Mac dragging color swatch) closed by
- nonchimerax
- 4:09 AM Ticket #5183 (Features covers image on download page for some versions of Chrome) created by
- […] Screenshot_2.png
- 2:32 AM Ticket #5182 (Crash handling AlphaFold results) created by
- […]
Sep 7, 2021:
- 7:46 PM Ticket #5181 (Color chooser crash on Mac dragging color swatch) created by
- […]
- 5:25 PM Ticket #5173 (Trojan in distribution?) closed by
- nonchimerax
- 4:32 PM Ticket #5084 (OpenMM 7.6) closed by
- fixed: Ok I updated OpenMM to 7.6.0 in ChimeraX using your Linux tar ball and …
- 2:22 PM Ticket #5134 (Blastprotein Qt GUI breaks alphafold search) closed by
- fixed
- 12:02 PM Ticket #5180 (ctypes crash) created by
- […]
- 11:59 AM Ticket #5172 (Graphics driver crash, macOS 11.3.1, Intel UHD Graphics 617) closed by
- nonchimerax: Crashed in Apple's graphics driver Graphics hardware encountered an …
- 11:57 AM Ticket #5171 (Graphics driver crash, macOS 11.5.2, Intel Iris Graphics 6100) closed by
- nonchimerax: Crashed in Apple's graphics driver Graphics hardware encountered an …
- 11:38 AM Ticket #5167 (Crash computing surface cap) closed by
- duplicate: Duplicate of #4630. Believed fixed a few months ago but fix is not in …
- 11:25 AM Ticket #5163 (mmCIF UniProt mapping not robust against '?' data) closed by
- fixed: Fixed. Chain B of 6zzx has the uniprot author sequence range going …
- 11:10 AM 2021-9-9 created by
- 11:09 AM DeveloperMeetings edited by
- (diff)
- 10:24 AM Ticket #5178 (unhashable type: 'Color') closed by
- fixed
- 9:30 AM Ticket #5175 (Unable to open file for writing PDB) closed by
- can't reproduce
- 9:21 AM Ticket #5174 (Index error opening regular PDB in MD Viewer) closed by
- limitation
- 9:10 AM Ticket #5170 (Crash showing system color panel) closed by
- can't reproduce: backingScaleFactor is supposed to be 1 or 2, depending on whether it's …
- 9:04 AM Ticket #5169 (Qt crash during exit) closed by
- can't reproduce
- 8:37 AM Ticket #5179 (modeller refine off by one?) created by
- commands: open 1www sequence chain /V modeller refine 1/V:1:10-16 …
- 7:05 AM Ticket #5178 (unhashable type: 'Color') created by
- […]
Sep 6, 2021:
- 11:04 AM Ticket #5177 (Blast results: wrapped C/C++ object of type HtmlView has been deleted) created by
- […]
- 10:52 AM Ticket #5176 (MatchMaker specific chain-chain pairing: wrapped C/C++ object of type ...) created by
- […]
- 6:49 AM Ticket #5175 (Unable to open file for writing PDB) created by
- […]
- 4:44 AM Ticket #5174 (Index error opening regular PDB in MD Viewer) created by
- […]
- 3:26 AM Ticket #5173 (Trojan in distribution?) created by
- Could well be a false detection, but my university-installed McAfee …
Note:
See TracTimeline
for information about the timeline view.
