![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#5187 closed defect (nonchimerax)
Crash on exit
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Eric Pettersen | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.14.6-x86_64-i386-64bit
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [54968]
Path: /private/var/folders/*/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.2.5 (1.2.5.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [54968]
User ID: 201218262
Date/Time: 2021-09-08 13:18:11.595 -0400
OS Version: Mac OS X 10.14.6 (18G9323)
Report Version: 12
Bridge OS Version: 5.5 (18P4759a)
Anonymous UUID: C0D302E8-D3A4-DB23-3084-A6EA1B261075
Sleep/Wake UUID: FFA19A57-47D0-4AFA-B0FF-613EAE53C11F
Time Awake Since Boot: 860000 seconds
Time Since Wake: 20000 seconds
System Integrity Protection: enabled
Notes: Translocated Process
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: EXC_I386_GPFLT
Exception Note: EXC_CORPSE_NOTIFY
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff5c1ee2c2 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff5c2a9bf1 pthread_kill + 284
2 libsystem_c.dylib 0x00007fff5c10bd8a raise + 26
3 libsystem_platform.dylib 0x00007fff5c29eb5d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 QtWidgets 0x00000001154cd010 QDockAreaLayoutInfo::deleteAllLayoutItems() + 80
6 QtWidgets 0x00000001154d5ffa QDockAreaLayout::deleteAllLayoutItems() + 42
7 QtWidgets 0x0000000115503f54 QMainWindowLayout::~QMainWindowLayout() + 52
8 QtWidgets 0x000000011550418e QMainWindowLayout::~QMainWindowLayout() + 14
9 QtWidgets 0x00000001153d4a57 QWidget::~QWidget() + 407
10 QtWidgets.abi3.so 0x0000000114eb0757 sipQMainWindow::~sipQMainWindow() + 55
11 QtCore.abi3.so 0x0000000114566466 cleanup_qobject(_sipSimpleWrapper*, void*) + 182
12 sip.cpython-38-darwin.so 0x0000000114df2b19 sip_api_visit_wrappers + 105
13 QtCore.abi3.so 0x000000011456628c cleanup_on_exit(_object*, _object*) + 12
14 org.python.python 0x000000010b2ae7f6 cfunction_vectorcall_NOARGS + 214
15 org.python.python 0x000000010b271dad PyVectorcall_Call + 109
16 org.python.python 0x000000010b3dbb91 atexit_callfuncs + 113
17 org.python.python 0x000000010b381bcf Py_FinalizeEx + 79
18 org.python.python 0x000000010b3a367b Py_RunMain + 1659
19 org.python.python 0x000000010b3a3bdf pymain_main + 223
20 org.python.python 0x000000010b3a3aeb Py_Main + 43
21 edu.ucsf.cgl.ChimeraX 0x000000010b246dc8 main + 120
22 libdyld.dylib 0x00007fff5c0b33d5 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000010c37b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 2:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000010c37b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 3:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000010c37b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 4:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000010c37b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 5:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000010c37b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 6:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000010c37b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 7:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000010c37b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 8:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff5c1f00a2 kevent64 + 10
1 QtWebEngineCore 0x00000001250c7e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x00000001250c7cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000012505ba94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 9:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000125065778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000125066150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000125065c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 10:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff5c1f00a2 kevent64 + 10
1 QtWebEngineCore 0x00000001250c7e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x00000001250c7cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000128f94f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 11:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001250bd2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124fe51db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
11 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 12:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 QtWebEngineCore 0x00000001250b4e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x000000012636c5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
6 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
7 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 13:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124fe520f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 14:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff5c1f00a2 kevent64 + 10
1 QtWebEngineCore 0x00000001250c7e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x00000001250c7cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 15:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001250bd2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124fe51db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
11 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 16:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001250bd2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124fe51db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
11 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 17:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001250bd2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124fe51db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
11 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 18:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001250bd2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012506576a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000125066150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x0000000125065d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 19:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001250bd2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124fe51db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
11 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 20:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001250bd2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124fe51db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012505062b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001250147cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012506fa7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
11 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 21:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff300fae0e __CFRunLoopServiceMachPort + 328
3 com.apple.CoreFoundation 0x00007fff300fa37c __CFRunLoopRun + 1612
4 com.apple.CoreFoundation 0x00007fff300f9ade CFRunLoopRunSpecific + 455
5 com.apple.AppKit 0x00007fff2d6f7bae _NSEventThread + 175
6 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 22:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001250bd2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012506576a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000125065e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x0000000125065c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 23:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000018aa4c2eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 24:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000018aa4c2eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 25:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000018aa4c2eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 26:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000018aa4c2eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 27:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000018aa4c2eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 28:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000018aa4c2eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 29:
0 libsystem_kernel.dylib 0x00007fff5c1eb866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5c2aa56e _pthread_cond_wait + 722
2 libopenblas.0.dylib 0x000000018aa4c2eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 30:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000125065778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000125066150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000125065cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 31:
0 libsystem_pthread.dylib 0x00007fff5c2a63f0 start_wqthread + 0
Thread 32:
0 libsystem_pthread.dylib 0x00007fff5c2a63f0 start_wqthread + 0
Thread 33:
0 libsystem_pthread.dylib 0x00007fff5c2a63f0 start_wqthread + 0
Thread 34:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff5c1e821a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5c1e8768 mach_msg + 60
2 QtWebEngineCore 0x00000001250bd492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000125065778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000125065e3d base::internal::WorkerThread::RunWorker() + 237
5 QtWebEngineCore 0x0000000125065cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x00000001250b8e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff5c2a72eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff5c2aa249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff5c2a640d thread_start + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000115bc05c0 rcx: 0x00007fa4f003fa48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007fa4f003fa80 rsp: 0x00007fa4f003fa48
r8: 0x00007fa4f003ff48 r9: 0xcab850c6d7e0bd94 r10: 0x0000000115bc066c r11: 0x0000000000000287
r12: 0x0000000000000307 r13: 0x00000000000005fe r14: 0x000000000000000b r15: 0x000000000000002d
rip: 0x00007fff5c1ee2c2 rfl: 0x0000000000000286 cr2: 0x00007fa4f003ff48
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff5c210000 - 0x7fff5c25bff7 libsystem_m.dylib (3158.200.7) /usr/lib/system/libsystem_m.dylib
0x7fff5c25c000 - 0x7fff5c286fff libsystem_malloc.dylib (166.270.1) /usr/lib/system/libsystem_malloc.dylib
0x7fff5c287000 - 0x7fff5c291ff7 libsystem_networkextension.dylib (767.250.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff5c292000 - 0x7fff5c299fff libsystem_notify.dylib (172.200.21) /usr/lib/system/libsystem_notify.dylib
0x7fff5c29a000 - 0x7fff5c2a3fef libsystem_platform.dylib (177.270.1) /usr/lib/system/libsystem_platform.dylib
0x7fff5c2a4000 - 0x7fff5c2aeff7 libsystem_pthread.dylib (330.250.2) /usr/lib/system/libsystem_pthread.dylib
0x7fff5c2af000 - 0x7fff5c2b2ff7 libsystem_sandbox.dylib (851.270.6) /usr/lib/system/libsystem_sandbox.dylib
0x7fff5c2b3000 - 0x7fff5c2b5ff3 libsystem_secinit.dylib (30.260.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff5c2b6000 - 0x7fff5c2bdff3 libsystem_symptoms.dylib (820.267.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff5c2be000 - 0x7fff5c2d3ff7 libsystem_trace.dylib (906.260.3) /usr/lib/system/libsystem_trace.dylib
0x7fff5c2d5000 - 0x7fff5c2daffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff5c2db000 - 0x7fff5c30afff libxpc.dylib (1336.261.7) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 214
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 18490328
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=983.7M resident=0K(0%) swapped_out_or_unallocated=983.7M(100%)
Writable regions: Total=5.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=5.1G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 896K 7
Activity Tracing 256K 1
CG backing stores 1496K 3
CG image 1132K 41
CoreAnimation 5240K 38
CoreGraphics 8K 1
CoreImage 68K 8
CoreUI image data 4344K 50
CoreUI image file 580K 8
Foundation 28K 2
Kernel Alloc Once 8K 1
MALLOC 2.8G 276
MALLOC guard page 48K 9
MALLOC_MEDIUM (reserved) 1.3G 16 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Mach message 24K 2
Memory Tag 242 12K 1
Memory Tag 251 12K 1
OpenGL GLSL 384K 5
STACK GUARD 136K 34
Stack 145.3M 35
Stack Guard 56.0M 1
VM_ALLOCATE 272.2M 94
VM_ALLOCATE (reserved) 384.0M 2 reserved VM address space (unallocated)
__DATA 91.0M 594
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 331.5M 213
__TEXT 652.2M 542
__UNICODE 564K 1
mapped file 118.7M 130
shared memory 5204K 22
=========== ======= =======
TOTAL 6.3G 2141
TOTAL, minus reserved VM space 4.4G 2141
System Profile:
Network Service: Wi-Fi, AirPort, en0
Boot Volume File System Type: apfs
Memory Module: BANK 0/ChannelA-DIMM0, 16 GB, DDR4, 2400 MHz, SK Hynix, -
Memory Module: BANK 2/ChannelB-DIMM0, 16 GB, DDR4, 2400 MHz, SK Hynix, -
USB Device: USB 3.1 Bus
USB Device: USB2.0 Hub
USB Device: USB2.0 Hub
USB Device: HID to SPI Device
USB Device: USB2.0 Hub
USB Device: USB 2.0 Hub
USB Device: USB Storage
USB Device: USB3.0 Hub
USB Device: USB3.0 Hub
USB Device: Targus USB3 DV4K DOCK w PD100W
USB Device: iBridge Bus
USB Device: Touch Bar Backlight
USB Device: Touch Bar Display
USB Device: Apple Internal Keyboard / Trackpad
USB Device: Headset
USB Device: Ambient Light Sensor
USB Device: FaceTime HD Camera (Built-in)
USB Device: Apple T2 Controller
Thunderbolt Bus: MacBook Pro, Apple Inc., 42.1
Thunderbolt Bus: MacBook Pro, Apple Inc., 42.1
Model: MacBookPro15,3, BootROM 1554.140.20.0.0 (iBridge: 18.16.14759.0.1,0), 8 processors, Intel Core i9, 2.4 GHz, 32 GB, SMC
Graphics: kHW_IntelUHDGraphics630Item, Intel UHD Graphics 630, spdisplays_builtin
Graphics: kHW_AMDRadeonProVega20Item, Radeon Pro Vega 20, spdisplays_pcie_device, 4 GB
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x7BF), wl0: Oct 23 2019 08:32:36 version 9.137.11.0.32.6.36 FWID 01-671ec60c
Bluetooth: Version 6.0.14d13, 3 services, 27 devices, 1 incoming serial ports
Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-2.11.26
OpenGL renderer: AMD Radeon Pro Vega 20 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro15,3
Processor Name: Intel Core i9
Processor Speed: 2.4 GHz
Number of Processors: 1
Total Number of Cores: 8
L2 Cache (per Core): 256 KB
L3 Cache: 16 MB
Hyper-Threading Technology: Enabled
Memory: 32 GB
Boot ROM Version: 1554.140.20.0.0 (iBridge: 18.16.14759.0.1,0)
Software:
System Software Overview:
System Version: macOS 10.14.6 (18G9323)
Kernel Version: Darwin 18.7.0
Time since boot: 19 days 4:52
Graphics/Displays:
Intel UHD Graphics 630:
Chipset Model: Intel UHD Graphics 630
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x3e9b
Revision ID: 0x0002
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal: Supported, feature set macOS GPUFamily2 v1
Radeon Pro Vega 20:
Chipset Model: Radeon Pro Vega 20
Type: GPU
Bus: PCIe
PCIe Lane Width: x16
VRAM (Total): 4 GB
Vendor: AMD (0x1002)
Device ID: 0x69af
Revision ID: 0x00c0
ROM Revision: 113-D2060I-087
VBIOS Version: 113-D20601MA0T-016
Option ROM Version: 113-D20601MA0T-016
EFI Driver Version: 01.01.087
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.5.0
chardet: 3.0.4
ChimeraX-AddCharge: 1.0.1
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.2
ChimeraX-AtomicLibrary: 3.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-Clipper: 0.16.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2.5
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.3
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ISOLDE: 1.2.2
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.6
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
imagecodecs: 2020.5.30
imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.7
jupyter-core: 4.7.1
kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 2.0.1
matplotlib: 3.3.2
matplotlib-inline: 0.1.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.18
psutil: 5.7.2
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash on exit |
comment:2 by , 4 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
Note:
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ChimeraX crashed when it was shutting down in Qt window toolkit QDockAreaLayout::deleteAllLayoutItems(). Seems likely to be a Qt bug but I don't see any report in Qt bug tracking. We have 5 previous reports of this crash. Might be worth filtering out such crashes in crash reporter. Hopefully updating to Qt 6.2 will fix this, currently at Qt 5.15.2.