![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#5345 closed defect (nonchimerax)
Crash in Qt on exit
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-20.6.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [21827]
Path: /Volumes/VOLUME/*/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.2.5 (1.2.5.0)
Code Type: X86-64 (Translated)
Parent Process: ??? [1]
Responsible: ChimeraX [21827]
User ID: 501
Date/Time: 2021-10-05 16:10:00.140 -0400
OS Version: macOS 11.6 (20G165)
Report Version: 12
Anonymous UUID: 997FA0EE-C25A-8854-C3CA-A3F48D5A31BA
Sleep/Wake UUID: 54254D7F-8A44-4196-8CB2-0A465A4CD9BB
Time Awake Since Boot: 8000 seconds
Time Since Wake: 87 seconds
System Integrity Protection: enabled
Notes: Translocated Process
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x0000cdb6844374a8 -> 0x00004db6844374a8 (possible pointer authentication failure)
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x4db6844374a8:
GPU Carveout (reserved) 1000000000-7000000000 [384.0G] ---/--- SM=NUL reserved VM address space (unallocated)
-->
MALLOC_NANO 600000000000-600008000000 [128.0M] rw-/rwx SM=PRV
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b792e __pthread_kill + 10
2 libsystem_c.dylib 0x00007fff202cabd5 raise + 26
3 libsystem_platform.dylib 0x00007fff2042bd7d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 QtWidgets.abi3.so 0x0000000128ab7757 sipQMainWindow::~sipQMainWindow() + 55
6 QtCore.abi3.so 0x00000001257e4466 cleanup_qobject(_sipSimpleWrapper*, void*) + 182
7 sip.cpython-38-darwin.so 0x00000001289c2b19 sip_api_visit_wrappers + 105
8 QtCore.abi3.so 0x00000001257e428c cleanup_on_exit(_object*, _object*) + 12
9 org.python.python 0x000000010ca337f6 cfunction_vectorcall_NOARGS + 214
10 org.python.python 0x000000010c9f6dad PyVectorcall_Call + 109
11 org.python.python 0x000000010cb60b91 atexit_callfuncs + 113
12 org.python.python 0x000000010cb06bcf Py_FinalizeEx + 79
13 org.python.python 0x000000010cb2867b Py_RunMain + 1659
14 org.python.python 0x000000010cb28bdf pymain_main + 223
15 org.python.python 0x000000010cb28aeb Py_Main + 43
16 edu.ucsf.cgl.ChimeraX 0x00000001044abdc8 main + 120
17 libdyld.dylib 0x00007fff20401f3d start + 1
Thread 1:: com.apple.rosetta.exceptionserver
0 runtime 0x00007ffdffd97a28 0x7ffdffd93000 + 18984
1 runtime 0x00007ffdffd9ceec 0x7ffdffd93000 + 40684
2 runtime 0x00007ffdffd9e2c0 0x7ffdffd93000 + 45760
Thread 2:
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b3cde __psynch_cvwait + 10
2 libopenblas.0.dylib 0x000000010ead227b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 3:
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b3cde __psynch_cvwait + 10
2 libopenblas.0.dylib 0x000000010ead227b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 4:
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b3cde __psynch_cvwait + 10
2 libopenblas.0.dylib 0x000000010ead227b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 5:
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b3cde __psynch_cvwait + 10
2 libopenblas.0.dylib 0x000000010ead227b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 6:
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b3cde __psynch_cvwait + 10
2 libopenblas.0.dylib 0x000000010ead227b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 7:
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b3cde __psynch_cvwait + 10
2 libopenblas.0.dylib 0x000000010ead227b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 8:
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b3cde __psynch_cvwait + 10
2 libopenblas.0.dylib 0x000000010ead227b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 9:: ThreadPoolServiceThread
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203ba1d2 kevent64 + 10
2 QtWebEngineCore 0x000000012e895cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000012e829a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 10:: ThreadPoolForegroundWorker
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e833778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000012e834150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000012e833cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 11:: ThreadPoolBackgroundWorker
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e833778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000012e834150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000012e833c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 12:: Chrome_IOThread
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203ba1d2 kevent64 + 10
2 QtWebEngineCore 0x000000012e895cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000132762f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 13:: NetworkConfigWatcher
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e88b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012e7b31db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 14:: CompositorTileWorker1
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b3cde __psynch_cvwait + 10
2 QtWebEngineCore 0x000000012e882e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x000000012fb3a5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
6 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 15:: Chrome_InProcGpuThread
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e7b320f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 16:: Chrome_ChildIOThread
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203ba1d2 kevent64 + 10
2 QtWebEngineCore 0x000000012e895cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 17:: VizCompositorThread
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e88b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012e7b31db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 18:: NetworkConfigWatcher
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e88b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012e7b31db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 19:: NetworkConfigWatcher
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e88b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012e7b31db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 20:: ThreadPoolSingleThreadForegroundBlocking0
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e88b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012e83376a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x000000012e834150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x000000012e833d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 21:: MemoryInfra
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e88b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012e7b31db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 22:: NetworkConfigWatcher
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e88b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012e7b31db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000012e81e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012e7e27cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000012e83da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 23:: com.apple.NSEventThread
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 com.apple.CoreFoundation 0x00007fff204df215 __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff204dd8cb __CFRunLoopRun + 1332
4 com.apple.CoreFoundation 0x00007fff204dccd0 CFRunLoopRunSpecific + 567
5 com.apple.AppKit 0x00007fff22d9623a _NSEventThread + 124
6 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 24:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e88b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012e83376a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x000000012e833e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x000000012e833c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 25:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 26:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 27:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 28:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 29:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 30:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 31:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 32:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 33:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 34:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 35:: ThreadPoolForegroundWorker
0 ??? 0x00007ffe946168f4 ???
1 libsystem_kernel.dylib 0x00007fff203b12ba mach_msg_trap + 10
2 QtWebEngineCore 0x000000012e88b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012e833778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000012e833e3d base::internal::WorkerThread::RunWorker() + 237
5 QtWebEngineCore 0x000000012e833cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000012e886e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203e68fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff203e2443 thread_start + 15
Thread 36:
0 runtime 0x00007ffdffdb57c8 0x7ffdffd93000 + 141256
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00000002047e1e00 rcx: 0x0000000000000000 rdx: 0xffffffffffffffff
rdi: 0x0beb6db39a2f15b0 rsi: 0x000000016784f088 rbp: 0x0beb6db39a2f15b0 rsp: 0x000000016784f088
r8: 0x000000000000000b r9: 0x0beb6db39a2f15b0 r10: 0x00000002047e1e00 r11: 0x00007fff202cabbb
r12: 0x0000000000000103 r13: 0x0000000000000191 r14: 0x000000000000000b r15: 0x0000000000000016
rip: rfl: 0x0000000000000283
Binary Images:
0x1044ab000 - 0x1044abfff +edu.ucsf.cgl.ChimeraX (1.2.5 - 1.2.5.0) /var/folders/*/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
0x10c4c4000 - 0x10c513fff +libRosettaRuntime (203.58) /Library/Apple/*/libRosettaRuntime
0x10c9d6000 - 0x10cc0cfff +org.python.python (3.8.8, [c] 2001-2019 Python Software Foundation. - 3.8.8) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/Python
0x10d116000 - 0x10d118fff +_heapq.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_heapq.cpython-38-darwin.so
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0x7fff3420d000 - 0x7fff34219fff com.apple.CoreDuetDaemonProtocol (1.0 - 1) /System/Library/PrivateFrameworks/CoreDuetDaemonProtocol.framework/Versions/A/CoreDuetDaemonProtocol
0x7fff34799000 - 0x7fff347e9fff com.apple.ChunkingLibrary (334.1 - 334.1) /System/Library/PrivateFrameworks/ChunkingLibrary.framework/Versions/A/ChunkingLibrary
0x7fff35043000 - 0x7fff35045fff com.apple.ConstantClasses (1.0 - 1) /System/Library/PrivateFrameworks/ConstantClasses.framework/Versions/A/ConstantClasses
0x7fff3505d000 - 0x7fff35072fff com.apple.CoreML.AppleNeuralEngine (1.0 - 1) /System/Library/PrivateFrameworks/AppleNeuralEngine.framework/Versions/A/AppleNeuralEngine
0x7fff350c8000 - 0x7fff35133fff com.apple.audio.midi.CoreMIDI (2.0 - 88) /System/Library/Frameworks/CoreMIDI.framework/Versions/A/CoreMIDI
0x7fff351f9000 - 0x7fff351fcfff com.apple.Cocoa (6.11 - 23) /System/Library/Frameworks/Cocoa.framework/Versions/A/Cocoa
0x7fff35246000 - 0x7fff3563afff com.apple.AppleMediaServices (1.0 - 1) /System/Library/PrivateFrameworks/AppleMediaServices.framework/Versions/A/AppleMediaServices
0x7fff35672000 - 0x7fff35aeafff com.apple.MediaRemote (1.0 - 1) /System/Library/PrivateFrameworks/MediaRemote.framework/Versions/A/MediaRemote
0x7fff35de6000 - 0x7fff35dedfff com.apple.DisplayServicesFW (3.1 - 380) /System/Library/PrivateFrameworks/DisplayServices.framework/Versions/A/DisplayServices
0x7fff36327000 - 0x7fff365bbfff libAWDSupportFramework.dylib (4205) /System/Library/PrivateFrameworks/WirelessDiagnostics.framework/Versions/A/Libraries/libAWDSupportFramework.dylib
0x7fff3662f000 - 0x7fff3665ffff libtidy.A.dylib (18.2) /usr/lib/libtidy.A.dylib
0x7fff36660000 - 0x7fff36680fff com.apple.MarkupUI (1.0 - 383.6) /System/Library/PrivateFrameworks/MarkupUI.framework/Versions/A/MarkupUI
0x7fff36681000 - 0x7fff36694fff com.apple.Engram (1.0 - 1) /System/Library/PrivateFrameworks/Engram.framework/Versions/A/Engram
0x7fff36695000 - 0x7fff366b8fff com.apple.openscripting (1.7 - 190) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/OpenScripting.framework/Versions/A/OpenScripting
0x7fff366b9000 - 0x7fff366bcfff com.apple.securityhi (9.0 - 55008) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI
0x7fff366bd000 - 0x7fff366c0fff com.apple.ink.framework (10.15 - 227) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink
0x7fff366c1000 - 0x7fff366c4fff com.apple.CommonPanels (1.2.6 - 101) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CommonPanels.framework/Versions/A/CommonPanels
0x7fff366c5000 - 0x7fff366ccfff com.apple.ImageCapture (1711.5.2 - 1711.5.2) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/ImageCapture.framework/Versions/A/ImageCapture
0x7fff366cd000 - 0x7fff378bdfff com.apple.JavaScriptCore (16611 - 16611.3.10.1.6) /System/Library/Frameworks/JavaScriptCore.framework/Versions/A/JavaScriptCore
0x7fff37929000 - 0x7fff37a3bfff com.apple.AVFCapture (1.0 - 82.6) /System/Library/PrivateFrameworks/AVFCapture.framework/Versions/A/AVFCapture
0x7fff37a3c000 - 0x7fff37acffff com.apple.Quagga (47 - 47) /System/Library/PrivateFrameworks/Quagga.framework/Versions/A/Quagga
0x7fff37ad0000 - 0x7fff37d1afff com.apple.CMCapture (1.0 - 82.6) /System/Library/PrivateFrameworks/CMCapture.framework/Versions/A/CMCapture
0x7fff38716000 - 0x7fff38725fff com.apple.HID (1.0 - 1) /System/Library/PrivateFrameworks/HID.framework/Versions/A/HID
0x7fff38726000 - 0x7fff3884dfff com.apple.QuickLookUIFramework (5.0 - 928.4) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuickLookUI.framework/Versions/A/QuickLookUI
0x7fff3884e000 - 0x7fff3886bfff com.apple.IOGPU (21.11 - 21.11) /System/Library/PrivateFrameworks/IOGPU.framework/Versions/A/IOGPU
0x7fff38cfe000 - 0x7fff38d3efff com.apple.MediaServices (1.0 - 1) /System/Library/PrivateFrameworks/MediaServices.framework/Versions/A/MediaServices
0x7fff38e3a000 - 0x7fff38e3afff com.apple.marco (10.0 - 1000) /System/Library/PrivateFrameworks/Marco.framework/Versions/A/Marco
0x7fff394ee000 - 0x7fff394f5fff com.apple.URLFormatting (146 - 146.22) /System/Library/PrivateFrameworks/URLFormatting.framework/Versions/A/URLFormatting
0x7fff394f6000 - 0x7fff39504fff com.apple.accessibility.AXCoreUtilities (1.0 - 1) /System/Library/PrivateFrameworks/AXCoreUtilities.framework/Versions/A/AXCoreUtilities
0x7fff39505000 - 0x7fff3951cfff libAccessibility.dylib (2885.49) /usr/lib/libAccessibility.dylib
0x7fff3bf57000 - 0x7fff3bf79fff com.apple.quicklook.QuickLookSupport (1.0 - 135.5) /System/Library/PrivateFrameworks/QuickLookSupport.framework/Versions/A/QuickLookSupport
0x7fff3bf7a000 - 0x7fff3c011fff com.apple.AirPlaySync (1.0 - 2780.10) /System/Library/PrivateFrameworks/AirPlaySync.framework/Versions/A/AirPlaySync
0x7fff3cba2000 - 0x7fff3cc25fff com.apple.CorePDF (4.0 - 529) /System/Library/PrivateFrameworks/CorePDF.framework/Versions/A/CorePDF
0x7fff3cc26000 - 0x7fff3cc29fff com.apple.print.framework.Print (15 - 271) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x7fff3cc2a000 - 0x7fff3cc2dfff com.apple.Carbon (160 - 164) /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
0x7fff3cd26000 - 0x7fff3cd26fff com.apple.avfoundation (2.0 - 2020.10) /System/Library/Frameworks/AVFoundation.framework/Versions/A/AVFoundation
0x7fff3cee0000 - 0x7fff3cefffff com.apple.private.SystemPolicy (1.0 - 1) /System/Library/PrivateFrameworks/SystemPolicy.framework/Versions/A/SystemPolicy
0x7fff3d04c000 - 0x7fff3d0a2fff com.apple.AccessibilitySharedSupport (1.0 - 1) /System/Library/PrivateFrameworks/AccessibilitySharedSupport.framework/Versions/A/AccessibilitySharedSupport
0x7fff3d0a3000 - 0x7fff3d0c0fff com.apple.sidecar-core (1.0 - 231) /System/Library/PrivateFrameworks/SidecarCore.framework/Versions/A/SidecarCore
0x7fff3d0c1000 - 0x7fff3d0c4fff com.apple.QuickLookNonBaseSystem (1.0 - 1) /System/Library/PrivateFrameworks/QuickLookNonBaseSystem.framework/Versions/A/QuickLookNonBaseSystem
0x7fff3d4dc000 - 0x7fff3d4e2fff com.apple.FeatureFlagsSupport (1.0 - 28.60.1) /System/Library/PrivateFrameworks/FeatureFlagsSupport.framework/Versions/A/FeatureFlagsSupport
0x7fff3d653000 - 0x7fff3d66afff com.apple.SafariServices.framework (16611 - 16611.3.10.1.6) /System/Library/Frameworks/SafariServices.framework/Versions/A/SafariServices
0x7fff3d81d000 - 0x7fff3d828fff com.apple.MallocStackLogging (1.0 - 1) /System/Library/PrivateFrameworks/MallocStackLogging.framework/Versions/A/MallocStackLogging
0x7fff3d83d000 - 0x7fff3d84ffff libmis.dylib (274.140.2) /usr/lib/libmis.dylib
0x7fff3d86c000 - 0x7fff3d9dbfff com.apple.CoreHandwriting (161 - 1.2) /System/Library/PrivateFrameworks/CoreHandwriting.framework/Versions/A/CoreHandwriting
0x7fff3d9dc000 - 0x7fff3dc37fff com.apple.imageKit (3.0 - 1100) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/ImageKit.framework/Versions/A/ImageKit
0x7fff3dc38000 - 0x7fff3dd4efff com.apple.PencilKit (1.0 - 1) /System/Library/Frameworks/PencilKit.framework/Versions/A/PencilKit
0x7fff3dd4f000 - 0x7fff3dd60fff com.apple.sidecar-ui (1.0 - 231) /System/Library/PrivateFrameworks/SidecarUI.framework/Versions/A/SidecarUI
0x7fff3e383000 - 0x7fff3e3e5fff com.apple.ImageCaptureCore (1711.5.2 - 1711.5.2) /System/Library/Frameworks/ImageCaptureCore.framework/Versions/A/ImageCaptureCore
0x7fff3e3e6000 - 0x7fff3e40bfff com.apple.quartzfilters (1.10.0 - 98) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzFilters.framework/Versions/A/QuartzFilters
0x7fff3e5ea000 - 0x7fff3e656fff com.apple.Safari.Core (16611 - 16611.3.10.1.6) /System/Library/PrivateFrameworks/SafariCore.framework/Versions/A/SafariCore
0x7fff3e657000 - 0x7fff3e7b9fff com.apple.MediaPlayer (1.0 - 1.0) /System/Library/Frameworks/MediaPlayer.framework/Versions/A/MediaPlayer
0x7fff3e7ba000 - 0x7fff3ea9bfff com.apple.iTunesCloud (1.0 - 1) /System/Library/PrivateFrameworks/iTunesCloud.framework/Versions/A/iTunesCloud
0x7fff3eac7000 - 0x7fff3ebf3fff com.apple.AnnotationKit (1.0 - 383.6) /System/Library/PrivateFrameworks/AnnotationKit.framework/Versions/A/AnnotationKit
0x7fff3ebf4000 - 0x7fff3f094fff com.apple.QuartzComposer (5.1 - 383) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzComposer.framework/Versions/A/QuartzComposer
0x7fff3f095000 - 0x7fff3f17dfff com.apple.PDFKit (1.0 - 950.40.3) /System/Library/Frameworks/PDFKit.framework/Versions/A/PDFKit
0x7fff3fec4000 - 0x7fff3ff41fff com.apple.TextInput (1.0 - 1.0) /System/Library/PrivateFrameworks/TextInput.framework/Versions/A/TextInput
0x7fff410dc000 - 0x7fff410dffff com.apple.quartzframework (1.5 - 25) /System/Library/Frameworks/Quartz.framework/Versions/A/Quartz
0x7fff41504000 - 0x7fff41521fff libCGInterfaces.dylib (544.4) /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/Libraries/libCGInterfaces.dylib
0x7fff43a2f000 - 0x7fff43a8efff com.apple.DifferentialPrivacy (1.0 - 1) /System/Library/PrivateFrameworks/DifferentialPrivacy.framework/Versions/A/DifferentialPrivacy
0x7fff43a8f000 - 0x7fff43aa8fff com.apple.SafariFoundation (16611 - 16611.3.10.1.6) /System/Library/PrivateFrameworks/SafariFoundation.framework/Versions/A/SafariFoundation
0x7fff43aa9000 - 0x7fff43aaffff com.apple.SafariPlatformSupport.framework (16611 - ???) /System/Library/PrivateFrameworks/SafariPlatformSupport.framework/Versions/A/SafariPlatformSupport
0x7fff43ab0000 - 0x7fff43d23fff com.apple.RawCamera.bundle (9.10.0 - 1450.3) /System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera
0x7fff4458c000 - 0x7fff44590fff com.apple.DAAPKit (1.0 - 1) /System/Library/PrivateFrameworks/DAAPKit.framework/Versions/A/DAAPKit
0x7fff45f07000 - 0x7fff45f0afff libpmenergy.dylib (227.140.1) /usr/lib/libpmenergy.dylib
0x7fff47c2c000 - 0x7fff47c6cfff com.apple.osanalytics.OSAnalytics (1.0 - 1) /System/Library/PrivateFrameworks/OSAnalytics.framework/Versions/A/OSAnalytics
0x7fff484ba000 - 0x7fff484d5fff com.apple.network.statistics.framework (1.2 - 1) /System/Library/PrivateFrameworks/NetworkStatistics.framework/Versions/A/NetworkStatistics
0x7fff518a2000 - 0x7fff518cffff com.apple.HelpData (2.3 - 201) /System/Library/PrivateFrameworks/HelpData.framework/Versions/A/HelpData
0x7fff518d0000 - 0x7fff518eafff com.apple.shortcut (2.16 - 118) /System/Library/PrivateFrameworks/Shortcut.framework/Versions/A/Shortcut
0x7fff518eb000 - 0x7fff5198afff com.apple.Symbolication (12.5 - 64544.70.1) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x7fff51b7a000 - 0x7fff51b7dfff libpmsample.dylib (227.140.1) /usr/lib/libpmsample.dylib
0x7fff54221000 - 0x7fff54257fff com.apple.ReplayKit (1.0 - 1) /System/Library/Frameworks/ReplayKit.framework/Versions/A/ReplayKit
0x7fff5584e000 - 0x7fff55851fff com.apple.ForceFeedback (1.0.6 - 1.0.6) /System/Library/Frameworks/ForceFeedback.framework/Versions/A/ForceFeedback
0x7fff6994a000 - 0x7fff6994efff libmetal_timestamp.dylib (31001.192.1) /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib
0x7fff6bd95000 - 0x7fff6bd9bfff libCoreFSCache.dylib (200.11) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib
0x7fff6bd9c000 - 0x7fff6bda0fff libCoreVMClient.dylib (200.11) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib
0x7fff6bda1000 - 0x7fff6bdb0fff com.apple.opengl (18.5.9 - 18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x7fff6bdb1000 - 0x7fff6bdb3fff libCVMSPluginSupport.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x7fff6bdb4000 - 0x7fff6bdbcfff libGFXShared.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
0x7fff6bdbd000 - 0x7fff6bdf0fff libGLImage.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x7fff6bdf1000 - 0x7fff6be2dfff libGLU.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
0x7fff6be2e000 - 0x7fff6bfc1fff libGLProgrammability.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x7fff6bfc2000 - 0x7fff6bfccfff libGL.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x7fff6bfcd000 - 0x7fff6c14afff GLEngine (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine
0x7fff6c14b000 - 0x7fff6c173fff GLRendererFloat (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat
0x7fff6d40c000 - 0x7fff6d464fff com.apple.opencl (4.6 - 4.6) /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x7fff6e50e000 - 0x7fff6e515fff com.apple.agl (3.3.4 - AGL-3.3.3) /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x7fff6e516000 - 0x7fff6e5fdfff com.apple.audio.AVFAudio (1.0 - 477.88) /System/Library/Frameworks/AVFAudio.framework/Versions/A/AVFAudio
0x7fff6f791000 - 0x7fff6f79bfff com.apple.AccessibilityBundles (1.0 - 174) /System/Library/PrivateFrameworks/AccessibilityBundles.framework/Versions/A/AccessibilityBundles
0x7fff6fb7f000 - 0x7fff6fb91fff com.apple.CMImaging (1.0 - 82.6) /System/Library/PrivateFrameworks/CMImaging.framework/Versions/A/CMImaging
0x7fff73e8f000 - 0x7fff73e9afff com.apple.SymptomAnalytics (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics
0x7fff740b0000 - 0x7fff740c8fff com.apple.SymptomPresentationFeed (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed
0x7fff77c40000 - 0x7fff77c47fff libRosetta.dylib (203.58) /usr/lib/libRosetta.dylib
Translated Code Information:
tmp0: 0xffffffffffffffff tmp1: 0x00007ffe946168c8 tmp2: 0x00007fff203b7924
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)
Writable regions: Total=4.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=4.3G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 1024K 8
Activity Tracing 256K 1
CG backing stores 2016K 6
CG image 212K 53
CoreAnimation 392K 67
CoreGraphics 16K 3
CoreUI image data 2060K 31
Foundation 32K 2
Kernel Alloc Once 8K 1
MALLOC 2.8G 163
MALLOC guard page 192K 8
MALLOC_MEDIUM (reserved) 832.0M 8 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 128.0M 1 reserved VM address space (unallocated)
Mach message 24K 6
OpenGL GLSL 384K 5
Rosetta Arena 4096K 2
Rosetta Generic 1752K 435
Rosetta IndirectBranch 2048K 1
Rosetta JIT 128.0M 1
Rosetta Return Stack 740K 74
Rosetta Thread Context 740K 74
STACK GUARD 44K 11
Stack 145.6M 36
Stack Guard 56.1M 25
VM_ALLOCATE 137.3M 421
VM_ALLOCATE (reserved) 160.1M 14 reserved VM address space (unallocated)
__DATA 30.6M 604
__DATA_CONST 23.2M 282
__DATA_DIRTY 1292K 185
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 597.3M 146
__OBJC_RO 70.2M 1
__OBJC_RW 2480K 2
__TEXT 576.9M 579
__UNICODE 588K 1
mapped file 4.7G 1016
shared memory 2988K 22
unshared pmap 10.4M 6
=========== ======= =======
TOTAL 10.4G 4303
TOTAL, minus reserved VM space 9.3G 4303
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/brandonirizarry/Desktop/ushape.cxs
Failed opening file /Users/brandonirizarry/Desktop/ushape.cxs:
invalid load key, '\x04'.
> open /Users/brandonirizarry/Desktop/ushape.cxs format session
Traceback (most recent call last):
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/gui.py", line 629, in customEvent
func(*args, **kw)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/widgets/htmlview.py", line 440, in defer
cxcmd(session, topic)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/widgets/htmlview.py", line 456, in cxcmd
run(session, cmd)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/commands/run.py", line 31, in run
results = command.run(text, log=log)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/commands/cli.py", line 2805, in run
result = ci.function(session, **kw_args)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/open_command/cmd.py", line 100, in cmd_open
return Command(session, registry=registry).run(provider_cmd_text, log=log)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/commands/cli.py", line 2805, in run
result = ci.function(session, **kw_args)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/open_command/cmd.py", line 154, in provider_open
name or model_name_from_path(fi.file_name)), provider_kw)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/open_command/cmd.py", line 390, in collated_open
return func(*func_args, **func_kw)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core_formats/__init__.py", line 26, in open
return cxs_open(session, data, **kw)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/session.py", line 925, in open
session.restore(stream, path=path, resize_window=resize_window)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/session.py", line 608, in restore
version = serialize.pickle_deserialize(stream)
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/serialize.py", line 57, in pickle_deserialize
return unpickler.load()
_pickle.UnpicklingError: invalid load key, '\x04'.
_pickle.UnpicklingError: invalid load key, '\x04'.
File "/Users/brandonirizarry/Library/Mobile
Documents/com~apple~CloudDocs/Desktop/ChimeraX/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/serialize.py", line 57, in pickle_deserialize
return unpickler.load()
See log for complete Python traceback.
Successfully installed ChimeraX-AddH-2.1.3 ChimeraX-HKCage-1.3
Installed ChimeraX-AddH (2.1.3)
Installed ChimeraX-HKCage (1.3)
OpenGL version: 4.1 Metal - 71.7.1
OpenGL renderer: Apple M1
OpenGL vendor: AppleHardware:
Hardware Overview:
Model Name: Mac mini
Model Identifier: Macmini9,1
Processor Name: Unknown
Processor Speed: 2.4 GHz
Number of Processors: 1
Total Number of Cores: 8
L2 Cache (per Core): 4 MB
Memory: 8 GB
Software:
System Software Overview:
System Version: macOS 11.6 (20G165)
Kernel Version: Darwin 20.6.0
Time since boot: 2:57
Graphics/Displays:
Apple M1:
Chipset Model: Apple M1
Type: GPU
Bus: Built-In
Total Number of Cores: 8
Vendor: Apple (0x106b)
Metal Family: Supported, Metal GPUFamily Apple 7
Displays:
S34J55x:
Resolution: 3440 x 1440 (UWQHD - Ultra-Wide Quad HD)
UI Looks like: 3440 x 1440 @ 75.00Hz
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.0
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in Qt on exit |
comment:2 by , 4 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | accepted → closed |
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