Opened 4 years ago

Closed 4 years ago

#5253 closed defect (duplicate)

unhashable type: 'Color'

Reported by: yen-li.li@… Owned by:
Priority: normal Milestone:
Component: Core Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description (last modified by Eric Pettersen) 

The following bug report has been submitted:
Platform:        Windows-10-10.0.19042
ChimeraX Version: 1.3.dev202109060834 (2021-09-06 08:34:57 UTC)
Description
Error happend when I tried to change the alpha channel for transparency.  

Log:
UCSF ChimeraX version: 1.3.dev202109060834 (2021-09-06)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open E:\Krios\20210423\csrelion\6221\model\rln121demod_modelfit.cxs format
> session

Opened rlnJ121_4M4_denmod_map.ccp4 as #1, grid size 130,175,176, pixel 0.835,
shown at level 0.162, step 1, values float32  
Log from Mon Sep 13 16:42:26 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open
> E:\\\Krios\\\20210423\\\csrelion\\\6221\\\model\\\rlnJ121_AFmodelfit.cxs

Opened rlnJ121_Refine3D_class001.mrc as #1, grid size 352,352,352, pixel
0.835, shown at level 0.00787, step 1, values float32  
Log from Sun Aug 1 00:14:47 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open E:\Krios\20210423\csrelion\6221\rlnJ121_rlnJ84_AFmodelfit.cxs format
> session

Opened rlnJ121_Refine3D_class001.mrc as #1, grid size 352,352,352, pixel
0.835, shown at level 0.00787, step 1, values float32  
Log from Fri Jul 30 02:44:06 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open E:\Krios\20210423\csrelion\6221\rlnJ121_rlnJ84_AFmodelfit.cxs format
> session

Opened rlnJ031_Refine3D_class001.mrc as #1, grid size 352,352,352, pixel
0.835, shown at level 0.00933, step 1, values float32  
Opened rlnJ121_Refine3D_class001.mrc as #10, grid size 352,352,352, pixel
0.835, shown at level 0.00933, step 1, values float32  
Log from Fri Jul 30 02:27:40 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open E:\Krios\20210423\csrelion\6221\rlnJ031_AFmodelfit.cxs format session

Opened rlnJ031_Refine3D_class001.mrc as #1, grid size 352,352,352, pixel
0.835, shown at level 0.00933, step 1, values float32  
Log from Wed Jul 28 23:41:31 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open E:\Krios\20210423\csrelion\6221\rlnJ031_modelfit.cxs format session

Opened rlnJ031_Refine3D_class001.mrc as #1, grid size 352,352,352, pixel
0.835, shown at level 0.00933, step 1, values float32  
Log from Sun Jul 25 16:29:33 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "E:\temp\EM data\H7N100
> cryoEM\20210423\20210423_6429mics\csJ200_modelfit.cxs" format session

Opened cryosparc_P19_J200_004_volume_map.mrc as #1, grid size 352,352,352,
pixel 0.835, shown at level 0.242, step 2, values float32  
Log from Sat Jul 24 18:49:24 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "E:\temp\EM data\H7N100
> cryoEM\20210423\20210423_6429mics\csJ200_modelfit.cxs" format session

Opened cryosparc_P19_J200_004_volume_map.mrc as #1, grid size 352,352,352,
pixel 0.835, shown at level 0.228, step 2, values float32  
Log from Sat Jul 24 18:31:45 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "E:\temp\EM data\H7N100
> cryoEM\20210423\20210423_6429mics\csJ200_modelfit.cxs" format session

Opened cryosparc_P19_J124_008_particles_R31_rln_reconstruct.mrc as #1, grid
size 352,352,352, pixel 0.835, shown at level 0.00981, step 1, values float32  
Opened cryosparc_P19_J200_004_volume_map.mrc as #6, grid size 352,352,352,
pixel 0.835, shown at level 0.32, step 2, values float32  
Log from Sat Jul 24 17:51:44 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "E:\temp\EM data\H7N100
> cryoEM\20210423\20210423_6429mics\cs124_model_fit.cxs" format session

Opened cryosparc_P19_J124_008_particles_R31_rln_reconstruct.mrc as #1, grid
size 352,352,352, pixel 0.835, shown at level 0.00981, step 1, values float32  
Log from Sat Jun 19 22:49:00 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "E:\temp\EM data\H7N100
> cryoEM\20210423\20210423_6429mics\cs124_model_fit.cxs" format session

Opened cryosparc_P19_J124_008_particles_R31_rln_reconstruct.mrc as #1, grid
size 352,352,352, pixel 0.835, shown at level 0.0103, step 1, values float32  
Log from Sat Jun 19 20:21:38 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
> E:\Krios\20210423\csrelion\cryosparc\csJ124\cryosparc_P19_J124_008_particles_R31_rln_reconstruct.mrc
> format mrc

Opened cryosparc_P19_J124_008_particles_R31_rln_reconstruct.mrc as #1, grid
size 352,352,352, pixel 0.835, shown at level 0.00386, step 2, values float32  

> volume #1 step 1

> volume #1 level 0.007122

> volume #1 level 0.008949

> volume #1 level 0.01234

> volume #1 level 0.007774

> close session

> open "E:\temp\EM data\H7N100
> cryoEM\20210423\20210423_6429mics\NU\cryosparc_P19_J124_008_volume_map.mrc"
> format mrc

Opened cryosparc_P19_J124_008_volume_map.mrc as #1, grid size 352,352,352,
pixel 0.835, shown at level 0.106, step 2, values float32  

> volume #1 level 0.3358

> open "E:/temp/EM data/4n9f.pdb1"

Summary of feedback from opening E:/temp/EM data/4n9f.pdb1  
---  
warnings | Start residue of secondary structure not found: HELIX 35 35 LYS C
18 GLN C 32 1 15  
Start residue of secondary structure not found: HELIX 36 36 THR C 36 ASP C 54
1 19  
Start residue of secondary structure not found: HELIX 37 37 LYS C 56 SER C 82
1 27  
Start residue of secondary structure not found: HELIX 38 38 ASP C 85 LEU C 107
1 23  
Start residue of secondary structure not found: HELIX 39 39 PRO C 108 PRO C
110 5 3  
680 messages similar to the above omitted  
Cannot find LINK/SSBOND residue HIS (139 )  
Cannot find LINK/SSBOND residue HIS (139 )  
Cannot find LINK/SSBOND residue CYS (114 )  
Cannot find LINK/SSBOND residue CYS (114 )  
Cannot find LINK/SSBOND residue CYS (133 )  
33 messages similar to the above omitted  
  
4n9f.pdb1 title:  
Crystal structure of the vif-cbfbeta-CUL5-elob-eloc pentameric complex [more
info...]  
  
Chain information for 4n9f.pdb1 #2  
---  
Chain | Description  
U | No description available  
X | No description available  
Y | No description available  
a | No description available  
b | No description available  
  
Non-standard residues in 4n9f.pdb1 #2  
---  
ZN — zinc ion  
  

> volume #1 level 0.1176

> hide #!2 models

> show #!2 models

> select #2

6505 atoms, 6643 bonds, 8 pseudobonds, 800 residues, 3 models selected  

> ui mousemode right "translate selected models"

> view matrix models #2,1,0,0,82.069,0,1,0,125.95,0,0,1,150.79

> select /X:1-98

748 atoms, 762 bonds, 1 pseudobond, 95 residues, 2 models selected  

> sequence chain #2/X

Alignment identifier is 2/X  

> sequence chain #2/Y

Alignment identifier is 2/Y  

> sequence chain #2/a

Alignment identifier is 2/a  

> sequence chain #2/b

Alignment identifier is 2/b  

> select #2

6505 atoms, 6643 bonds, 8 pseudobonds, 800 residues, 3 models selected  

> select clear

> style sphere

Changed 6505 atom styles  

> hide atoms

> show cartoons

> open "E:/temp/EM data/6p3x chain A.pdb" "E:/temp/EM data/6p40 chain A.pdb"

Summary of feedback from opening E:/temp/EM data/6p3x chain A.pdb  
---  
warnings | Cannot find LINK/SSBOND residue HIS (65 )  
Cannot find LINK/SSBOND residue CYS (97 )  
Cannot find LINK/SSBOND residue CYS (100 )  
Cannot find LINK/SSBOND residue ZN (701 )  
  
Summary of feedback from opening E:/temp/EM data/6p40 chain A.pdb  
---  
warnings | Cannot find LINK/SSBOND residue HIS (65 )  
Cannot find LINK/SSBOND residue CYS (97 )  
Cannot find LINK/SSBOND residue CYS (100 )  
Cannot find LINK/SSBOND residue HIS (257 )  
Cannot find LINK/SSBOND residue CYS (287 )  
2 messages similar to the above omitted  
  
6p3x chain A.pdb title:  
Crystal structure of full length APOBEC3G E/Q (pH 7.0) [more info...]  
  
Chain information for 6p3x chain A.pdb #3  
---  
Chain | Description  
A | apolipoprotein B MRNA editing enzyme, catalytic peptide- like 3G  
  
Non-standard residues in 6p3x chain A.pdb #3  
---  
ZN — zinc ion  
  
6p40 chain A.pdb title:  
Crystal structure of full length APOBEC3G FKL [more info...]  
  
Chain information for 6p40 chain A.pdb #4  
---  
Chain | Description  
A | apolipoprotein B MRNA editing enzyme, catalytic peptide- like 3G  
  
Non-standard residues in 6p40 chain A.pdb #4  
---  
ZN — zinc ion  
  

[deleted extensive log]

> matchmaker #4 to #3

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker csJ245-rsr49-coot2iso-cootH_real_space_refined_059.pdb, chain A
(#3) with csJ245-rsr49-coot2iso-cootH_real_space_refined_059.pdb, chain A
(#4), sequence alignment score = 2111  
RMSD between 384 pruned atom pairs is 0.000 angstroms; (across all 384 pairs:
0.000)  
  

> close #3

> select clear

> color #4/A #90ee90

> color #4/A yellow

> rename #4 id #3

> select clear

> select #2/A:366

15 atoms, 14 bonds, 1 residue, 1 model selected  

> select up

271 atoms, 271 bonds, 17 residues, 1 model selected  

> select up

6377 atoms, 6485 bonds, 386 residues, 1 model selected  

> style sel stick

Changed 6377 atom styles  

> show sel atoms

> color sel byhetero

> select clear

> select #3/A:4

16 atoms, 16 bonds, 1 residue, 1 model selected  

> select up

236 atoms, 239 bonds, 13 residues, 1 model selected  

> select up

6377 atoms, 6485 bonds, 386 residues, 1 model selected  

> style sel stick

Changed 6377 atom styles  

> color sel byhetero

> style sel stick

Changed 6377 atom styles  

> show sel atoms

> color sel byhetero

> select clear

> hide #!1 models

> show #!1 models

> hide #!1 models

> hide atoms

> show #!1 models

> volume #1 level 0.1622

> save E:/Krios/20210423/csrelion/6221/model/rln121demod_modelfit.cxs
> includeMaps true

——— End of log from Mon Sep 13 16:42:26 2021 ———

opened ChimeraX session  

> combine #2-3

Remapping chain ID 'A' in csJ245-rsr49-coot2iso-
cootH_real_space_refined_059.pdb #3 to 'F'  
Remapping chain ID 'B' in csJ245-rsr49-coot2iso-
cootH_real_space_refined_059.pdb #3 to 'G'  
Remapping chain ID 'C' in csJ245-rsr49-coot2iso-
cootH_real_space_refined_059.pdb #3 to 'H'  
Remapping chain ID 'D' in csJ245-rsr49-coot2iso-
cootH_real_space_refined_059.pdb #3 to 'I'  
Remapping chain ID 'E' in csJ245-rsr49-coot2iso-
cootH_real_space_refined_059.pdb #3 to 'J'  

> molmap #4 10

Opened combination map 10 as #5, grid size 49,61,57, pixel 3.33, shown at
level 0.0733, step 1, values float32  

> vop resample #5 onGrid #1

Opened combination map 10 resampled as #6, grid size 130,175,176, pixel 0.835,
shown at step 1, values float32  

> close #6

> close #5

> open E:/Krios/20210423/csrelion/6221/rlnJ121_Refine3D_class001.mrc

Opened rlnJ121_Refine3D_class001.mrc as #5, grid size 352,352,352, pixel
0.835, shown at level 0.00477, step 2, values float32  

> fitmap #5 inMap #1

Fit map rlnJ121_Refine3D_class001.mrc in map rlnJ121_4M4_denmod_map.ccp4 using
54491 points  
correlation = 0.6593, correlation about mean = 0.8018, overlap = 139.2  
steps = 128, shift = 6.12, angle = 10.8 degrees  
  
Position of rlnJ121_Refine3D_class001.mrc (#5) relative to
rlnJ121_4M4_denmod_map.ccp4 (#1) coordinates:  
Matrix rotation and translation  
1.00000000 0.00002222 -0.00006252 0.00533357  
-0.00002222 1.00000000 -0.00001759 0.01355785  
0.00006252 0.00001759 1.00000000 -0.01231873  
Axis 0.25622251 -0.91079331 -0.32373689  
Axis point 233.25028850 0.00000000 113.96071060  
Rotation angle (degrees) 0.00393308  
Shift along axis -0.00699380  
  

> volume #5 level 0.005475

> volume #5 step 1

> volume #5 level 0.006832

Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.3.dev202109060834\bin\lib\site-
packages\chimerax\model_panel\tool.py", line 231, in set_model_color  
cmd = "color #%s %s%s" % (m.id_string, color_name(rgba), target_string)  
File "C:\Program Files\ChimeraX 1.3.dev202109060834\bin\lib\site-
packages\chimerax\core\colors.py", line 779, in color_name  
_color_names = {rgba8:name for name, rgba8 in BuiltinColors.items()}  
File "C:\Program Files\ChimeraX 1.3.dev202109060834\bin\lib\site-
packages\chimerax\core\colors.py", line 779, in <dictcomp>  
_color_names = {rgba8:name for name, rgba8 in BuiltinColors.items()}  
TypeError: unhashable type: 'Color'  
  
TypeError: unhashable type: 'Color'  
  
File "C:\Program Files\ChimeraX 1.3.dev202109060834\bin\lib\site-
packages\chimerax\core\colors.py", line 779, in  
_color_names = {rgba8:name for name, rgba8 in BuiltinColors.items()}  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.3.dev202109060834\bin\lib\site-
packages\chimerax\model_panel\tool.py", line 237, in log_delayed_cmd  
Command(ses).run(but.delayed_cmd_text, log_only=True)  
AttributeError: 'MultiColorButton' object has no attribute 'delayed_cmd_text'  
  
AttributeError: 'MultiColorButton' object has no attribute 'delayed_cmd_text'  
  
File "C:\Program Files\ChimeraX 1.3.dev202109060834\bin\lib\site-
packages\chimerax\model_panel\tool.py", line 237, in log_delayed_cmd  
Command(ses).run(but.delayed_cmd_text, log_only=True)  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 471.68
OpenGL renderer: NVIDIA GeForce RTX 2060 SUPER/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: System manufacturer
Model: System Product Name
OS: Microsoft Windows 10 Home (Build 19042)
Memory: 34,261,569,536
MaxProcessMemory: 137,438,953,344
CPU: 16 Intel(R) Core(TM) i9-9900K CPU @ 3.60GHz
OSLanguage: en-US
Locale: ('zh_TW', 'cp950')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2021.5.30
    cftime: 1.5.0
    chardet: 4.0.0
    ChimeraX-AddCharge: 1.1.4
    ChimeraX-AddH: 2.1.10
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.2.2
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.29.1
    ChimeraX-AtomicLibrary: 4.1.4
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.0
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.5.3
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.1
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.4.1
    ChimeraX-CommandLine: 1.1.5
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.3.dev202109060834
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.1
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.4
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.1
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.4
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.1
    ChimeraX-MDcrds: 2.5
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.4
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.1
    ChimeraX-ModelPanel: 1.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.7
    ChimeraX-PDB: 2.6.1
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.1
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.4.3
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.6
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.12
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0.1
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    comtypes: 1.1.10
    cxservices: 1.1
    cycler: 0.10.0
    Cython: 0.29.23
    decorator: 5.0.9
    distlib: 0.3.1
    docutils: 0.17.1
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 3.4.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.20
    imagecodecs: 2021.4.28
    imagesize: 1.2.0
    ipykernel: 5.5.5
    ipython: 7.23.1
    ipython-genutils: 0.2.0
    jedi: 0.18.0
    Jinja2: 2.11.3
    jupyter-client: 6.1.12
    jupyter-core: 4.7.1
    kiwisolver: 1.3.2
    lxml: 4.6.3
    lz4: 3.1.3
    MarkupSafe: 1.1.1
    matplotlib: 3.4.2
    matplotlib-inline: 0.1.2
    msgpack: 1.0.2
    netCDF4: 1.5.6
    networkx: 2.6.2
    numexpr: 2.7.3
    numpy: 1.21.0
    openvr: 1.16.801
    packaging: 21.0
    ParmEd: 3.2.0
    parso: 0.8.2
    pickleshare: 0.7.5
    Pillow: 8.2.0
    pip: 21.1.1
    pkginfo: 1.7.0
    prompt-toolkit: 3.0.20
    psutil: 5.8.0
    pycollada: 0.7.1
    pydicom: 2.1.2
    Pygments: 2.9.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.1
    pytz: 2021.1
    pywin32: 228
    pyzmq: 22.2.1
    qtconsole: 5.1.0
    QtPy: 1.11.0
    RandomWords: 0.3.0
    requests: 2.25.1
    scipy: 1.6.3
    setuptools: 57.0.0
    sfftk-rw: 0.7.1
    six: 1.16.0
    snowballstemmer: 2.1.0
    sortedcontainers: 2.4.0
    Sphinx: 4.0.1
    sphinx-autodoc-typehints: 1.12.0
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2021.4.8
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.1.0
    urllib3: 1.26.6
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.36.2
    wheel-filename: 1.3.0
    WMI: 1.5.1

Change History (1)

comment:1 by Eric Pettersen, 4 years ago

Component: Unassigned → Core
Description: modified (diff)
Platform: → all
Project: → ChimeraX
Resolution: → duplicate
Status: new → closed
Summary: ChimeraX bug report submission → unhashable type: 'Color'

Hi Yen-Li,

Thanks for reporting the problem. This bug was in the daily build for exactly one day and unfortunately you have that particular daily build. If you upgrade to the latest, you won't run into this problem.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab

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