![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Timeline
Aug 20, 2025:
- 8:47 PM Ticket #18492 (Bad XYZ file) created by
- […]
- 8:34 PM Ticket #18491 (Crash using open/save dialog) created by
- […]
- 3:27 PM Ticket #18490 (Boltz: no supported GPU) created by
- […]
- 2:12 PM ChangeLog edited by
- (diff)
- 1:07 PM Ticket #18489 (ffmpeg: Permission denied) created by
- […]
- 12:46 PM Ticket #18488 (AlphaFold prediction fails with a TensorFlow error) closed by
- fixed: Fixed. Apparently Google Colab updated TensorFlow which caused this …
- 12:44 PM Ticket #18488 (AlphaFold prediction fails with a TensorFlow error) created by
- Colabfold Colab tensorflow error Please cite ColabFold: Making …
- 12:21 PM Ticket #18487 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel explained what we know about this crash: …
- 12:18 PM Ticket #18484 (No selection outline) closed by
- fixed: Unfortunately that is a bug in your Mac AMD graphics driver. Apple is …
- 12:09 PM Ticket #18483 (glTexImage2D: out of memory) closed by
- can't reproduce: The usual expose event on status line at startup on Windows causes …
- 8:57 AM Ticket #18486 (Crash after loading trajectory frames) closed by
- can't reproduce
- 8:50 AM Ticket #18482 (ffmpeg: Permission denied) closed by
- duplicate
- 8:48 AM Ticket #18481 (Crash on Mac waking from sleep) closed by
- duplicate
- 6:14 AM Ticket #18487 (Crash on Mac waking from sleep) created by
- […]
- 3:16 AM Ticket #18486 (Crash after loading trajectory frames) created by
- […]
- 2:49 AM Ticket #18485 (Recent Ubuntu update spams log) created by
- […]
Aug 19, 2025:
- 3:36 PM Ticket #18484 (No selection outline) created by
- […]
- 1:00 PM Ticket #18390 (viewdock state (columns?) not saved in session) closed by
- fixed: Fix: …
- 12:49 PM Ticket #18483 (glTexImage2D: out of memory) created by
- […]
- 12:15 PM Ticket #18482 (ffmpeg: Permission denied) created by
- […]
- 11:31 AM Ticket #18477 (Boltz: PytorchStreamReader failed reading zip archive: failed finding ...) closed by
- fixed: Fixed error where session is closed and Boltz panel tries to report …
- 11:02 AM Dev2025-8-25 created by
- 11:01 AM 2025-8-21 created by
- 10:59 AM DeveloperMeetings edited by
- (diff)
- 10:49 AM Ticket #18481 (Crash on Mac waking from sleep) created by
- […]
- 9:56 AM Ticket #18480 ('pip install pyKVFinder' fails with empty error message) closed by
- not a bug: Thanks for letting me know! --Eric
- 9:19 AM Ticket #18479 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:17 AM Ticket #18478 (ffmpeg: Permission denied) closed by
- duplicate
- 9:13 AM Ticket #18476 (Crash on Mac waking from sleep) closed by
- duplicate
- 8:04 AM Ticket #18480 ('pip install pyKVFinder' fails with empty error message) created by
- […]
- 6:05 AM Ticket #18479 (Crash on Mac waking from sleep) created by
- […]
- 4:11 AM Ticket #18478 (ffmpeg: Permission denied) created by
- […]
- 2:27 AM Ticket #18477 (Boltz: PytorchStreamReader failed reading zip archive: failed finding ...) created by
- […]
Aug 18, 2025:
- 11:18 PM Ticket #18476 (Crash on Mac waking from sleep) created by
- […]
- 6:37 PM Ticket #18475 (Crash on close after closing floating interfaces panel with PySide) created by
- […]
- 6:24 PM Ticket #18474 (Closing floating side view window crashes PySide ChimeraX) created by
- […]
- 5:03 PM Ticket #18473 ("alias usage" interfering with the actual alias) created by
- […] Hi, I'm testing out the "usage" command for aliases, and I've …
- 4:12 PM Dev2025-8-18 edited by
- (diff)
- 4:10 PM Dev2025-8-18 edited by
- (diff)
- 3:12 PM Dev2025-8-18 edited by
- (diff)
- 2:20 PM Ticket #18437 (Crash in python_instances_of_class after "build join" command) closed by
- duplicate: This problem is indeed fixed in current versions of ChimeraX.
- 2:16 PM Ticket #18444 ("PDB" file contains non-ASCII character or control character) closed by
- not a bug: The user renamed a PyMOL session file to a ".pdb" suffix and tried to …
- 2:13 PM Ticket #18447 (Error restoring session: self.bond_rotaters.values(): ...) closed by
- duplicate: Duplicate of #18447
- 2:04 PM C++Features edited by
- (diff)
- 2:04 PM C++Features edited by
- (diff)
- 2:02 PM C++Features edited by
- (diff)
- 1:55 PM Ticket #18472 (Boltz: The GPU device instance has been suspended) closed by
- nonchimerax: The ChimeraX log shows the error from Windows "The GPU device instance …
- 1:44 PM Dev2025-8-18 created by
- 1:10 PM Ticket #18472 (Boltz: The GPU device instance has been suspended) created by
- […]
- 12:14 PM Ticket #18470 (cartoon style modeStrand plank: 'StrandPlank' object has no attribute ...) closed by
- not a bug: The modeStrand option of the cartoon style command was never fully …
- 11:55 AM Ticket #18471 (Mac Accessibility Hover Text: "Cell requested for row 0 is out of ...) closed by
- nonchimerax
- 11:48 AM Ticket #18471 (Mac Accessibility Hover Text: "Cell requested for row 0 is out of ...) created by
- […]
- 11:43 AM Ticket #18470 (cartoon style modeStrand plank: 'StrandPlank' object has no attribute ...) created by
- […]
- 11:29 AM Ticket #18460 (BoltzMSA/index: No such file or directory) closed by
- fixed
- 11:14 AM Ticket #18456 (Could not make opengl context current) closed by
- nonchimerax: The ChimeraX Log panel explained why ChimeraX could not show …
- 11:12 AM Ticket #18454 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel said what we know about this crash: …
- 11:11 AM Ticket #18469 (KVFinder on old MacOS) closed by
- limitation: Hi Biao, Unfortunately, the underlying pyKVFinder program that …
- 11:07 AM Ticket #18467 (~AppData\Local: Permission denied) closed by
- can't reproduce
- 11:00 AM Ticket #18465 ('pip install pyKVFinder' fails with empty error message) closed by
- duplicate: Duplicate of #17229
- 10:59 AM Ticket #18156 ('pip install pyKVFinder' fails with empty error message) closed by
- duplicate: Duplicate of #17229
- 10:55 AM Ticket #18464 (Regular PDB file opened in MD Viewer) closed by
- duplicate
- 10:40 AM Ticket #18462 (Segmentations: chimerax misspelled in import statement) closed by
- duplicate: Duplicate of #18313
- 10:37 AM Ticket #18461 (mshMIGPerform crash in NSAccessiblity native Mac APIs) closed by
- duplicate: Duplicate of #18238
- 10:34 AM Ticket #18459 (mshMIGPerform crash in NSAccessiblity native Mac APIs) closed by
- duplicate: Duplicate of #18238
- 10:31 AM Ticket #18458 (Proofpoint Essentials - Quarantine Digest) closed by
- not a bug
- 10:28 AM Ticket #18455 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:14 AM Ticket #18469 (KVFinder on old MacOS) created by
- […]
- 9:53 AM Ticket #18468 (Crash in garbage collection) created by
- […]
- 8:42 AM Ticket #18467 (~AppData\Local: Permission denied) created by
- […]
- 5:30 AM Ticket #18466 (XMAS: error parsing results from pLink) created by
- […]
- 4:15 AM Ticket #18465 ('pip install pyKVFinder' fails with empty error message) created by
- […]
- 2:59 AM Ticket #18464 (Regular PDB file opened in MD Viewer) created by
- […]
- 2:57 AM Ticket #18463 (Sequence identity selection broken) created by
- […]
Aug 17, 2025:
- 9:43 PM Ticket #18462 (Segmentations: chimerax misspelled in import statement) created by
- […]
- 7:21 PM Ticket #18461 (mshMIGPerform crash in NSAccessiblity native Mac APIs) created by
- […]
- 6:35 PM Ticket #18460 (BoltzMSA/index: No such file or directory) created by
- […]
- 6:31 PM Ticket #18459 (mshMIGPerform crash in NSAccessiblity native Mac APIs) created by
- […]
- 5:01 AM Ticket #18458 (Proofpoint Essentials - Quarantine Digest) created by
- […]
- 12:33 AM Ticket #2024 (Doc strings / optional arguments for aliases) reopened by
- That's reasonable. I'm partial to "usage aliases".
Aug 16, 2025:
- 7:56 PM Ticket #18457 (Crash showing/using Side View) created by
- […]
- 8:21 AM Ticket #18456 (Could not make opengl context current) created by
- […]
- 6:05 AM Ticket #18455 (Crash on Mac waking from sleep) created by
- […]
Aug 15, 2025:
- 10:56 PM Ticket #18454 (Crash on Mac waking from sleep) created by
- […]
- 2:02 PM Ticket #17662 (Segmentations: 'chimerax' misspelled) closed by
- fixed: Fixed in daily builds.
- 2:02 PM Ticket #18441 (Segmentations: ModuleNotFoundError: No module named 'chmerax') closed by
- duplicate: Use a daily build. This will be fixed when our windows signing key …
- 1:57 PM Ticket #16375 ('Segmentation' object has no attribute 'data') closed by
- fixed: Use a daily build
- 1:56 PM Ticket #18453 (ffmpeg: permission denied) closed by
- duplicate
- 1:55 PM Ticket #18342 (PySide6: AttributeError: 'MoleculesTable' object has no attribute ...) closed by
- fixed: Fixed with new qtshim that promotes enums on PySide6 like it does for …
- 1:54 PM Ticket #18433 (Segmentations tool: AttributeError: 'MRCGrid' object has no attribute ...) closed by
- duplicate: Use a daily build
- 1:54 PM Ticket #18435 (PySide error: AttributeError: 'PySide6.QtWidgets.QDialogButtonBox' ...) closed by
- fixed: Fixed with new qtshim that promotes enums on PySide6. Use a newer …
- 1:50 PM Ticket #18445 (AttributeError: 'PySide6.QtWidgets.QDialogButtonBox' object has no ...) closed by
- fixed: Fixed with new qtshim that promotes PySide6 enums. Use a newer daily …
- 1:07 PM Ticket #18453 (ffmpeg: permission denied) created by
- […]
- 12:58 PM Ticket #18249 (Crash destroying OpenGL context on exit) closed by
- can't reproduce: No response from reporter.
- 12:57 PM Ticket #18280 (Crash in Qt waking from sleep on Mac, multiple displays) closed by
- can't reproduce: No response from reporter.
- 12:56 PM Ticket #18302 (Crash in multiply_matrix_lists) closed by
- can't reproduce: ChimeraX crashed manipulating position matrices, probably because a …
- 12:54 PM Ticket #18343 (Qt fatal error: GLOzone not found for unknown) closed by
- can't reproduce: No response from reporter.
- 12:52 PM Ticket #18452 (ffmpeg PermissionError: [Errno 13] Permission denied: ...) closed by
- duplicate: Fixed in 1.10.1 release.
- 12:50 PM Ticket #18451 (Crash in Qt 6.9.1 event loop after Boltz prediction) closed by
- can't reproduce
- 12:46 PM Ticket #18449 (Error in restoring session: bond rotators) closed by
- duplicate
- 12:45 PM Ticket #18448 (Error restoring session bond rotators) closed by
- duplicate: Duplicate of #18447
- 12:42 PM Ticket #18446 (Crash in Qt window toolkit in Mac QAccessibleCache::removeCocoaElement()) closed by
- can't reproduce
- 12:34 PM Ticket #18443 (Showing DiffFit tool: OSError: [Errno 28] No space left on device) closed by
- limitation
- 12:31 PM Ticket #18442 (Crash in Qt in Mac NSAccessibilityPerformEntryPointBOOL) closed by
- duplicate
- 12:28 PM Ticket #18440 (Crash in python_instances_of_class) closed by
- duplicate
- 12:26 PM Ticket #18439 (Crash in python_instances_of_class) closed by
- duplicate
- 12:16 PM Ticket #18436 (Windows crash in save dialog in Segger SaveRegsToMRC()) closed by
- can't reproduce
- 12:05 PM Ticket #18434 (Mac wake from sleep crash) closed by
- duplicate
- 11:59 AM Ticket #18431 (Crash in Qt event loop in Mac AutoreleasePoolPage) closed by
- can't reproduce
- 9:18 AM Ticket #18452 (ffmpeg PermissionError: [Errno 13] Permission denied: ...) created by
- […]
- 7:27 AM Ticket #18451 (Crash in Qt 6.9.1 event loop after Boltz prediction) created by
- […]
- 7:12 AM Ticket #18450 (XMAS tool: AttributeError: 'Tabular' object has no attribute ...) created by
- […]
- 6:18 AM Ticket #18449 (Error in restoring session: bond rotators) created by
- […]
- 6:17 AM Ticket #18448 (Error restoring session bond rotators) created by
- […]
- 6:17 AM Ticket #18447 (Error restoring session: self.bond_rotaters.values(): ...) created by
- […]
- 1:48 AM Ticket #18446 (Crash in Qt window toolkit in Mac QAccessibleCache::removeCocoaElement()) created by
- […]
- 12:22 AM Ticket #18445 (AttributeError: 'PySide6.QtWidgets.QDialogButtonBox' object has no ...) created by
- […]
Aug 14, 2025:
- 9:17 PM Ticket #18444 ("PDB" file contains non-ASCII character or control character) created by
- […]
- 8:28 PM Ticket #18443 (Showing DiffFit tool: OSError: [Errno 28] No space left on device) created by
- […]
- 3:22 PM 2025-8-14 edited by
- (diff)
- 2:33 PM 2025-8-14 edited by
- (diff)
- 1:47 PM Ticket #18442 (Crash in Qt in Mac NSAccessibilityPerformEntryPointBOOL) created by
- […]
- 1:22 PM ChangeLog edited by
- (diff)
- 1:21 PM ChangeLog edited by
- (diff)
- 11:52 AM Ticket #18441 (Segmentations: ModuleNotFoundError: No module named 'chmerax') created by
- […]
- 10:39 AM Ticket #18440 (Crash in python_instances_of_class) created by
- […]
- 10:33 AM Ticket #18439 (Crash in python_instances_of_class) created by
- […]
- 10:26 AM Ticket #18438 (SEQCROW: ValueError: could not broadcast input array from shape (0,) ...) created by
- […] irc_s_forward.out
- 10:10 AM Ticket #18437 (Crash in python_instances_of_class after "build join" command) created by
- […]
- 9:19 AM Ticket #18436 (Windows crash in save dialog in Segger SaveRegsToMRC()) created by
- […]
- 8:25 AM Ticket #18435 (PySide error: AttributeError: 'PySide6.QtWidgets.QDialogButtonBox' ...) created by
- […]
- 6:45 AM Ticket #18434 (Mac wake from sleep crash) created by
- […]
- 2:13 AM Ticket #18433 (Segmentations tool: AttributeError: 'MRCGrid' object has no attribute ...) created by
- […]
Aug 13, 2025:
- 8:28 PM Ticket #18432 (kvfinder KeyError: 'KAA') created by
- […]
- 6:16 PM Ticket #18429 (Models with same ID in session) closed by
- can't reproduce: I'm not sure what they are trying to report since the duplicate model …
- 6:16 PM Ticket #18431 (Crash in Qt event loop in Mac AutoreleasePoolPage) created by
- […]
- 5:50 PM Ticket #18430 (Parsing mmCIF ma_qa_metric_local residue scores complains about ...) created by
- […] ligand1_model_0.cif
- 5:39 PM Ticket #18395 (Compound-description size change changes table size instead of dialog size) closed by
- limitation: I don't think this is feasible. In the code where I lay out the …
- 4:47 PM Ticket #18429 (Models with same ID in session) created by
- […]
- 4:38 PM Ticket #18427 (C++ structure position not always updated) closed by
- fixed: Instead, made the workaround I suggested to Tristan the actual fix. …
- 4:23 PM Ticket #18427 (C++ structure position not always updated) reopened by
- On the other hand, I don't think that fix is correct at all -- hold on.
- 4:19 PM Ticket #18427 (C++ structure position not always updated) closed by
- fixed: Fixed. If something wonky happens with moving models or …
- 11:29 AM Ticket #18426 (Boltz-related problems) closed by
- can't reproduce: Have seen this apparent loss of GPU OpenGL context several times, only …
- 11:23 AM Ticket #18425 (Picking: Singular matrix) closed by
- can't reproduce: This ChimeraX error about a singular matrix when you hover the mouse …
- 9:30 AM Ticket #18428 (Picking: Singular matrix) closed by
- duplicate: Duplicate of #18425
- 8:43 AM Ticket #18424 (Crash at startup) closed by
- can't reproduce
- 8:42 AM Ticket #18423 ('pip install pyKVFinder' fails with empty error message) closed by
- duplicate
- 8:40 AM Ticket #18422 (Proofpoint Essentials - Quarantine Digest) closed by
- not a bug
- 8:39 AM Ticket #18421 (Crash using open/save dialog) closed by
- can't reproduce
- 8:38 AM Ticket #18420 (ffmpeg: Permission denied) closed by
- duplicate: Hi Arvind, Thanks for reporting this problem. It is fixed in the …
- 8:35 AM Ticket #18419 (KVFinder on old MacOS) closed by
- limitation: Hi Leo, Unfortunately, the underlying pyKVFinder program that …
- 8:24 AM Ticket #18428 (Picking: Singular matrix) created by
- […]
- 8:09 AM Ticket #18427 (C++ structure position not always updated) created by
- […]
- 6:20 AM Ticket #18426 (Boltz-related problems) created by
- […]
- 4:55 AM Ticket #18425 (Picking: Singular matrix) created by
- […]
- 4:25 AM Ticket #18424 (Crash at startup) created by
- […]
- 1:26 AM Ticket #18423 ('pip install pyKVFinder' fails with empty error message) created by
- […]
Aug 12, 2025:
- 9:01 PM Ticket #18422 (Proofpoint Essentials - Quarantine Digest) created by
- […]
- 6:50 PM DeveloperMeetings edited by
- (diff)
- 6:49 PM 2025-8-14 edited by
- (diff)
- 6:49 PM DeveloperMeetings edited by
- (diff)
- 2:56 PM Dev2025-8-11 edited by
- (diff)
- 2:47 PM C++Features edited by
- (diff)
- 2:45 PM C++Features edited by
- (diff)
- 2:39 PM C++Features edited by
- (diff)
- 2:33 PM C++Features edited by
- (diff)
- 2:29 PM C++Features edited by
- (diff)
- 1:54 PM C++Features created by
- 1:52 PM Ticket #18421 (Crash using open/save dialog) created by
- […]
- 1:43 PM Features edited by
- (diff)
- 1:21 PM Ticket #18245 (ChimeraX hangs recomputing RMSD headers for sequence viewer when ...) closed by
- fixed: There was a bug where the alignment was registering additional …
- 12:47 PM Ticket #18420 (ffmpeg: Permission denied) created by
- […]
- 12:45 PM Ticket #18419 (KVFinder on old MacOS) created by
- […]
- 12:00 PM Ticket #18416 (Volume sdLevel is not from mean but from from zero) closed by
- fixed: Wow, that is embarrassing. That wrong sdLevel calculation has been in …
- 11:34 AM Ticket #18412 (Crash in glBufferSubData) closed by
- can't reproduce: ChimeraX crashed in the Apple OpenGL graphics driver in …
- 11:25 AM DeveloperMeetings edited by
- (diff)
- 11:25 AM DeveloperMeetings edited by
- (diff)
- 11:24 AM 2025-8-14 created by
- 11:23 AM DeveloperMeetings edited by
- (diff)
- 11:14 AM Ticket #18300 (ViewDock suggestions) closed by
- fixed: Hi Andrii, I believe I have addressed all these issues now: 1) There …
- 10:08 AM ChangeLog edited by
- (diff)
- 9:42 AM Ticket #18418 (ffmpeg: Permission denied) closed by
- duplicate
- 9:40 AM Ticket #18417 (ChargeError not caught) closed by
- duplicate
- 9:38 AM Ticket #18415 (Session restore: ItemTable's selectionModel() is None (Parsing ...) closed by
- duplicate: Duplicate of #16654
- 9:34 AM Ticket #18414 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:25 AM Ticket #18413 (QScore: scores is None) closed by
- duplicate: Another duplicate of #17983
- 9:20 AM Ticket #18411 (KVFinder on old MacOS) closed by
- limitation: Hi Esteban, Unfortunately, the underlying pyKVFinder program that …
- 7:30 AM Ticket #18418 (ffmpeg: Permission denied) created by
- […]
- 4:56 AM Ticket #18417 (ChargeError not caught) created by
- […]
- 3:59 AM Ticket #18416 (Volume sdLevel is not from mean but from from zero) created by
- […]
- 3:30 AM Ticket #18415 (Session restore: ItemTable's selectionModel() is None (Parsing ...) created by
- […]
Aug 11, 2025:
- 10:58 PM Ticket #18414 (Crash on Mac waking from sleep) created by
- […]
- 8:44 PM Ticket #18413 (QScore: scores is None) created by
- […]
- 4:20 PM Dev2025-8-11 edited by
- (diff)
- 4:18 PM Dev2025-8-11 edited by
- (diff)
- 4:17 PM Dev2025-8-11 edited by
- (diff)
- 4:17 PM Dev2025-8-11 edited by
- (diff)
- 2:12 PM Ticket #18412 (Crash in glBufferSubData) created by
- […]
- 12:08 PM Ticket #18411 (KVFinder on old MacOS) created by
- […]
- 11:47 AM Ticket #18410 (isolde start sim: RuntimeError: clEnqueueReadBuffer) created by
- […]
- 11:44 AM Ticket #18404 (boltz predict: FileNotFoundError) closed by
- not a bug: Appears that ChimeraX tried to start a boltz subprocess but the boltz …
- 11:23 AM Ticket #18403 (alphafold pae: JSONDecodeError (DropBox)) closed by
- nonchimerax: The AlphaFold PAE json file in Dropbox was empty when ChimeraX tried …
- 11:19 AM Ticket #18400 (vop subtract: ArrayMemoryError) closed by
- limitation: User opened multiple 4 GB maps (1000 x 1000 x 1000 float32) and ran …
- 11:13 AM Ticket #18409 ('pip install pyKVFinder' fails with empty error message) created by
- […]
- 11:11 AM Ticket #18408 (Crash on Mac waking from sleep) closed by
- duplicate
- 11:11 AM Ticket #18407 (QScore: scores is None) closed by
- duplicate: Looks like a duplicate of #17983
- 11:06 AM Ticket #18408 (Crash on Mac waking from sleep) created by
- […]
- 11:06 AM Ticket #18405 (mshMIGPerform crash in NSAccessiblity native Mac APIs) closed by
- duplicate: Duplicate of #18238
- 10:58 AM Ticket #18402 (ffmpeg: Permission denied) closed by
- duplicate
- 2:39 AM Ticket #18407 (QScore: scores is None) created by
- […]
Aug 10, 2025:
- 6:36 PM Ticket #18406 (CopickPicksFile: argument after ** must be a mapping, not list) created by
- […]
- 1:27 AM Ticket #18405 (mshMIGPerform crash in NSAccessiblity native Mac APIs) created by
- […]
- 1:14 AM Ticket #18404 (boltz predict: FileNotFoundError) created by
- […]
Aug 9, 2025:
- 2:54 PM Ticket #18403 (alphafold pae: JSONDecodeError (DropBox)) created by
- […]
- 1:22 PM Ticket #18402 (ffmpeg: Permission denied) created by
- […]
Aug 8, 2025:
- 5:51 PM Ticket #9465 (Report chirality) closed by
- fixed: Implemented a "chirality" command whose syntax is: chirality …
- 12:43 PM Ticket #18401 (Show Alphabridge interface circle plot for Boltz predictions) created by
- Arun Gupta asked on the ChimeraX mailing list about using Boltz …
- 12:32 PM Ticket #18396 (Ribbon does not include non-standard residues) closed by
- not a bug: Residue 2 in chain B of 8EBK has no C-alpha atom (name CA) and ribbons …
- 10:17 AM Ticket #18400 (vop subtract: ArrayMemoryError) created by
- […]
- 9:19 AM Ticket #18399 (Cannot submit Clipper) created by
- […]
- 9:06 AM Ticket #18398 (Crash in event loop) closed by
- can't reproduce
- 9:05 AM Ticket #18397 (Multiple consecutive Find Cavities: dead models) closed by
- can't reproduce
- 7:55 AM Ticket #18398 (Crash in event loop) created by
- […]
- 2:45 AM Ticket #18397 (Multiple consecutive Find Cavities: dead models) created by
- […]
Aug 7, 2025:
- 11:56 PM Ticket #18396 (Ribbon does not include non-standard residues) created by
- […] Screenshot 2025-08-08 121834.png
- 3:13 PM Ticket #18394 (ViewDock not showing MAE format in open dialog) closed by
- fixed: Fix: …
- 2:25 PM Ticket #18395 (Compound-description size change changes table size instead of dialog size) created by
- One other mildly annoying thing is that switching from multiple …
- 2:22 PM Ticket #18394 (ViewDock not showing MAE format in open dialog) created by
- I just tried to use ViewDock on example maestro files from Phil, but …
- 2:20 PM 2025-8-7 edited by
- (diff)
- 2:13 PM Ticket #18391 (The option for predicting affinity cannot be found.) closed by
- not a bug: The affinity option is only in the ChimeraX daily build, not the …
- 2:13 PM Ticket #18393 (The option for predicting affinity cannot be found.) closed by
- duplicate
- 2:12 PM Ticket #18392 (The option for predicting affinity cannot be found.) closed by
- duplicate
- 2:08 PM Ticket #18387 (volume level: ArrayMemoryError) closed by
- nonchimerax: Out of memory trying to allocate 800 MB for showing a volume at step …
- 2:05 PM Ticket #18389 (Crash emitting signal from button) closed by
- can't reproduce
- 2:02 PM Ticket #18388 (Crash in event loop) closed by
- can't reproduce
- 1:54 PM Ticket #18386 (Deep sequence viewer recursion) closed by
- can't reproduce: Would need the input file
- 1:45 PM Ticket #18385 (Crash on Mac waking from sleep) closed by
- duplicate
- 1:39 PM Ticket #18383 (H-Bonds: acc_phi_psi() bad number of arguments) closed by
- not a bug
- 1:33 PM Ticket #18393 (The option for predicting affinity cannot be found.) created by
- […]
- 1:29 PM Ticket #18392 (The option for predicting affinity cannot be found.) created by
- […]
- 1:28 PM Ticket #18391 (The option for predicting affinity cannot be found.) created by
- […] 0808_1.jpg
- 12:58 PM Ticket #18390 (viewdock state (columns?) not saved in session) created by
- Session did not save which columns were shown (checkboxes seem correct …
- 10:53 AM Ticket #18389 (Crash emitting signal from button) created by
- […]
- 6:54 AM Ticket #18388 (Crash in event loop) created by
- […]
- 6:06 AM Ticket #18387 (volume level: ArrayMemoryError) created by
- […]
- 4:05 AM Ticket #18386 (Deep sequence viewer recursion) created by
- […]
- 3:49 AM Ticket #18385 (Crash on Mac waking from sleep) created by
- […]
Aug 6, 2025:
- 10:06 PM Ticket #18384 (copick: 'CopickRunFSSpec' object has no attribute 'tomograms') created by
- […]
- 5:11 PM phenix-8-6-25 edited by
- (diff)
- 5:11 PM phenix-8-6-25 edited by
- (diff)
- 4:41 PM phenix-8-6-25 edited by
- (diff)
- 1:52 PM Ticket #18383 (H-Bonds: acc_phi_psi() bad number of arguments) created by
- […]
- 1:46 PM Ticket #18381 (Crash in garbage collection) closed by
- duplicate
- 1:23 PM Ticket #18382 (ISOLDE not installable into 1.10.1) created by
- […]
- 12:51 PM phenix-8-6-25 edited by
- (diff)
- 12:06 PM phenix-8-6-25 edited by
- (diff)
- 11:50 AM phenix-8-6-25 edited by
- (diff)
- 11:44 AM phenix-8-6-25 edited by
- (diff)
- 11:30 AM phenix-8-6-25 edited by
- (diff)
- 11:25 AM Ticket #18381 (Crash in garbage collection) created by
- […]
- 11:20 AM phenix-8-6-25 edited by
- (diff)
- 11:12 AM phenix-8-6-25 edited by
- (diff)
- 10:23 AM Ticket #18379 (Crash opening mmCIF) closed by
- can't reproduce: Looks like it might be a Coot mmCIF file. This is probably a …
- 10:23 AM phenix-8-6-25 created by
- 10:23 AM Features edited by
- (diff)
- 9:51 AM Ticket #18380 ('MRCGrid' object has no attribute 'dicom_data') closed by
- duplicate
- 9:48 AM Ticket #18377 (Crash on Mac waking from sleep) closed by
- duplicate
- 8:28 AM Ticket #18380 ('MRCGrid' object has no attribute 'dicom_data') created by
- […]
- 8:18 AM Ticket #18379 (Crash opening mmCIF) created by
- […]
Aug 5, 2025:
- 2:52 PM Ticket #18184 (ChimeraX build on Windows fails due to pip check OpenMM nvidia requirements) closed by
- fixed: This has been fixed in recent builds.
- 12:38 PM Ticket #18378 (Didn't find section 'Main' in tab 'ISOLDE') created by
- […]
- 12:34 PM Ticket #18377 (Crash on Mac waking from sleep) created by
- […]
- 10:55 AM Ticket #18373 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel explained what we know about this crash: …
- 10:52 AM Ticket #18375 (ffmpeg: Permission denied) closed by
- duplicate
- 10:49 AM Ticket #18374 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:47 AM Ticket #18372 (Crash using open/save dialog) closed by
- can't reproduce
- 10:46 AM Ticket #18371 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:45 AM Ticket #18370 (H-Bonds: acc_phi_psi() takes N positional arguments) closed by
- not a bug
- 10:44 AM DeveloperMeetings edited by
- (diff)
- 10:44 AM Dev2025-8-11 created by
- 10:43 AM Ticket #18369 (H-Bonds: acc_phi_psi() takes N positional arguments) closed by
- not a bug
- 10:43 AM 2025-8-7 created by
- 10:42 AM DeveloperMeetings edited by
- (diff)
- 10:31 AM Ticket #18367 (VMD extended PDB format) closed by
- limitation: I'm glad there's a workaround. The library that reads individual …
- 10:23 AM Ticket #18376 (Add "bring" option to align command) created by
- On Aug 4, 2025, at 11:07 AM, Alexis Rohou via ChimeraX-users …
- 10:00 AM Ticket #18366 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:59 AM Ticket #18365 (Crash using open/save dialog) closed by
- can't reproduce: Was also under remote control
- 9:57 AM Ticket #18364 (Crash in event loop) closed by
- can't reproduce: Using remote display
- 9:52 AM Ticket #18375 (ffmpeg: Permission denied) created by
- […]
- 6:47 AM Ticket #18374 (Crash on Mac waking from sleep) created by
- […]
- 5:23 AM Ticket #18373 (Crash on Mac waking from sleep) created by
- […]
- 5:23 AM Ticket #18372 (Crash using open/save dialog) created by
- […]
- 5:20 AM Ticket #18371 (Crash on Mac waking from sleep) created by
- […]
- 4:52 AM Ticket #18370 (H-Bonds: acc_phi_psi() takes N positional arguments) created by
- […]
- 4:49 AM Ticket #18369 (H-Bonds: acc_phi_psi() takes N positional arguments) created by
- […]
- 4:03 AM Ticket #18368 (DiffFit: mrcfille.open() does not like .mrc file) created by
- […]
- 3:07 AM Ticket #18362 (PySide6.QtWidgets.QFileDialog.getOpenFileNames(): unsupported keyword ...) closed by
- duplicate
- 3:06 AM Ticket #18363 (PySide6.QtWidgets.QFileDialog.getOpenFileNames(): unsupported keyword ...) closed by
- duplicate: Duplicate of #18341
- 3:04 AM Ticket #18361 ('ItemTable' object has no attribute 'AdjustToContents') closed by
- fixed: These errors appear to be fixed by the same promote_enums fix from #18360
- 2:58 AM Ticket #18341 (PySide6.QtWidgets.QFileDialog.getOpenFileNames(): unsupported keyword ...) closed by
- fixed: It's 'dir' for pyside6. Added an if using_pyqt6:... block to that code.
- 1:41 AM Ticket #18367 (VMD extended PDB format) created by
- […] trek1_minispadin_in_membrane.pdb
- 1:20 AM Ticket #18366 (Crash on Mac waking from sleep) created by
- […]
Aug 4, 2025:
- 11:38 PM Ticket #18365 (Crash using open/save dialog) created by
- […]
- 11:22 PM Ticket #18364 (Crash in event loop) created by
- […]
- 10:38 PM Ticket #18363 (PySide6.QtWidgets.QFileDialog.getOpenFileNames(): unsupported keyword ...) created by
- […]
- 10:32 PM Ticket #18362 (PySide6.QtWidgets.QFileDialog.getOpenFileNames(): unsupported keyword ...) created by
- […]
- 9:46 PM Ticket #18361 ('ItemTable' object has no attribute 'AdjustToContents') created by
- […]
- 3:54 PM Ticket #18358 (Local Mac builds don't work due to Python 3.11.9 update) closed by
- fixed: They should be working now.
- 3:53 PM Ticket #18360 (PySide6: AttributeError: 'AtomicStructureListWidget' object has no ...) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/6796e474f1d741bc3a2257d16ac5f8 …
- 2:27 PM Ticket #18360 (PySide6: AttributeError: 'AtomicStructureListWidget' object has no ...) created by
- […]
- 12:30 PM Ticket #18347 (Error in glGetError) closed by
- nonchimerax: The graphics driver on your computer is broken causing ChimeraX to …
- 12:29 PM Ticket #18346 (Error in glGetError(!)) closed by
- nonchimerax: Broken OpenGL graphics driver.
- 12:08 PM Ticket #18357 (ffmpeg: Permission denied) closed by
- duplicate
- 12:03 PM Ticket #18359 (Boltz table error, PySide 6 problem) closed by
- duplicate: Same as #18342
- 12:00 PM Ticket #18359 (Boltz table error, PySide 6 problem) created by
- […]
- 11:42 AM Ticket #18358 (Local Mac builds don't work due to Python 3.11.9 update) created by
- On Arm Mac. $ make build-from-scratch …
- 11:37 AM Ticket #18357 (ffmpeg: Permission denied) created by
- […]
- 11:27 AM Ticket #18356 (Crash in event loop) closed by
- can't reproduce
- 11:26 AM Ticket #18356 (Crash in event loop) created by
- […]
- 11:23 AM Ticket #18355 (Bug Reporter crash on Windows) created by
- […]
- 10:34 AM Ticket #18351 (Update bundle) closed by
- limitation
- 10:22 AM Ticket #18349 (PySide6: AttributeError: 'ItemTable' object has no attribute ...) closed by
- duplicate: Essentially a duplicate of #18342
- 10:20 AM Ticket #18348 (Proofpoint Essentials - Quarantine Digest) closed by
- not a bug
- 10:14 AM Ticket #18344 (PySide6.QtWidgets.QFileDialog.getOpenFileNames(): unsupported keyword ...) closed by
- duplicate: Duplicate of #18341; adding reporter to recipient list for that ticket
- 10:07 AM Ticket #18340 (Session restore: invalid load key) closed by
- duplicate: Trying to restore into version 1.1
- 10:05 AM Ticket #18339 (Proofpoint Essentials - Quarantine Digest) closed by
- not a bug
- 8:54 AM Ticket #18354 (Installation problem) created by
- […]
- 8:13 AM Ticket #18353 (Crash creating HTML profile) created by
- […] …
- 2:25 AM Ticket #18352 (PySide6 crash closing tool) created by
- […]
- 1:22 AM Ticket #18351 (Update bundle) created by
- […]
Aug 3, 2025:
- 11:56 PM Ticket #18350 (PySide6 crash at exit) created by
- […]
- 11:48 PM Ticket #18349 (PySide6: AttributeError: 'ItemTable' object has no attribute ...) created by
- […]
- 5:01 PM Ticket #18348 (Proofpoint Essentials - Quarantine Digest) created by
- […]
- 10:52 AM Ticket #18347 (Error in glGetError) created by
- […]
- 10:51 AM Ticket #18346 (Error in glGetError(!)) created by
- […]
- 10:30 AM Ticket #18345 (No space left on device) created by
- […]
Aug 2, 2025:
- 8:32 PM Ticket #18344 (PySide6.QtWidgets.QFileDialog.getOpenFileNames(): unsupported keyword ...) created by
- […]
- 8:31 PM Ticket #18343 (Qt fatal error: GLOzone not found for unknown) created by
- […]
- 4:45 PM Ticket #18342 (PySide6: AttributeError: 'MoleculesTable' object has no attribute ...) created by
- […]
- 12:49 PM Ticket #18341 (PySide6.QtWidgets.QFileDialog.getOpenFileNames(): unsupported keyword ...) created by
- […]
- 5:31 AM Ticket #18340 (Session restore: invalid load key) created by
- […]
Aug 1, 2025:
- 9:00 PM Ticket #18339 (Proofpoint Essentials - Quarantine Digest) created by
- […]
- 2:03 PM Ticket #18338 (Crash while dismissing submenu) closed by
- can't reproduce
- 1:46 PM Ticket #18338 (Crash while dismissing submenu) created by
- […]
- 11:41 AM Ticket #18337 (SEQCROW: open .out: A 2-dimensional array must be passed) created by
- […]
- 11:20 AM Ticket #18336 (Framebuffer depth map creation failed) closed by
- limitation: OpenGL error 36061 means "GL_FRAMEBUFFER_UNSUPPORTED is returned if …
- 9:40 AM Ticket #18334 (Software Patch for Lenovo Laptops) closed by
- nonchimerax: You need to get an updated graphics driver from Lenovo or Intel. So …
- 9:28 AM Ticket #18333 (Crash in event loop at startup) closed by
- can't reproduce
- 7:20 AM Ticket #18336 (Framebuffer depth map creation failed) created by
- […]
- 6:04 AM Ticket #18335 (isolde sim start sel: OpenMMException: Error compiling kernel) created by
- […]
- 1:36 AM Ticket #18334 (Software Patch for Lenovo Laptops) created by
- […] [[Image(...)]]
- 1:03 AM Ticket #18333 (Crash in event loop at startup) created by
- […]
Jul 31, 2025:
- 11:26 PM Ticket #18332 (superqt not installed despite being ArtiaX dependency) created by
- […]
- 2:22 PM 2025-7-31 edited by
- (diff)
- 2:21 PM 2025-7-31 edited by
- (diff)
- 2:14 PM Ticket #18331 (Crash using open/save dialog) closed by
- can't reproduce
- 2:13 PM Ticket #18330 (Crash on Mac waking from sleep) closed by
- duplicate
- 2:09 PM Ticket #18328 ('pip install pyKVFinder' fails with empty error message) closed by
- duplicate
- 2:06 PM Dev2025-8-4 edited by
- (diff)
- 1:35 PM Ticket #18327 (pyKVFinder → numpy 2) closed by
- duplicate
- 1:34 PM Ticket #18326 (pyKVFinder → numpy 2) closed by
- worksforme: Hi Tristan, Yeah, we're basically aware that pyKVFinder installs …
- 1:33 PM Ticket #18331 (Crash using open/save dialog) created by
- […]
- 1:30 PM Ticket #18325 (Bug report test) closed by
- not a bug
- 1:29 PM Ticket #18324 (ChimeraX bug report submission) closed by
- not a bug
- 12:23 PM Ticket #18330 (Crash on Mac waking from sleep) created by
- […]
- 11:34 AM Ticket #18329 (ArtiaX: math domain error) created by
- […]
- 11:34 AM Ticket #18328 ('pip install pyKVFinder' fails with empty error message) created by
- […]
- 11:34 AM Ticket #18327 (pyKVFinder → numpy 2) created by
- […]
- 11:34 AM Ticket #18326 (pyKVFinder → numpy 2) created by
- […]
- 11:34 AM Ticket #18325 (Bug report test) created by
- […]
- 11:32 AM Ticket #18324 (ChimeraX bug report submission) created by
- […]
Jul 30, 2025:
- 4:58 PM Ticket #18316 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel explained what we know about this crash …
- 4:50 PM Ticket #18323 (Recognize more 3D display screen names) created by
- Need to add more 3D display screen names, or more rules for …
- 4:40 PM Ticket #18322 (Crash on Mac waking from sleep) closed by
- duplicate
- 3:53 PM Ticket #18321 (mshMIGPerform crash) closed by
- duplicate: As per #18238, hopefully fixed in newer versions of Qt
- 3:45 PM Ticket #18320 (Crash in QTableWidget.clearContents()) closed by
- can't reproduce: I don't see any reason in our code why it would crash.
- 1:56 PM Ticket #18322 (Crash on Mac waking from sleep) created by
- […]
- 11:34 AM Ticket #18321 (mshMIGPerform crash) created by
- […]
- 10:38 AM Ticket #18320 (Crash in QTableWidget.clearContents()) created by
- […]
- 9:29 AM Ticket #18319 (ffmpeg: Permission denied) closed by
- duplicate
- 9:27 AM Ticket #18318 (Crash using open/save dialog) closed by
- can't reproduce
- 8:43 AM Ticket #18317 (Crash in garbage collection) closed by
- duplicate
- 8:39 AM Ticket #18314 (Crash on Mac waking from sleep) closed by
- duplicate
- 8:04 AM Ticket #18319 (ffmpeg: Permission denied) created by
- […]
- 7:51 AM Ticket #18318 (Crash using open/save dialog) created by
- […]
- 6:25 AM Ticket #18317 (Crash in garbage collection) created by
- […]
- 4:28 AM Ticket #18316 (Crash on Mac waking from sleep) created by
- […]
- 3:03 AM Ticket #18315 (Tooshed requirements check) created by
- […]
Jul 29, 2025:
- 8:48 PM Ticket #18314 (Crash on Mac waking from sleep) created by
- […]
- 4:26 PM ChangeLog edited by
- (diff)
- 1:27 PM Ticket #18303 (Crash in Qt event loop during recording movie) closed by
- can't reproduce
- 1:19 PM DeveloperMeetings edited by
- (diff)
- 1:19 PM Dev2025-8-4 created by
- 12:52 PM Ticket #18313 (Segmentations: chimerax misspelled in import statement) created by
- […]
- 12:23 PM 2025-7-31 created by
- 12:22 PM DeveloperMeetings edited by
- (diff)
- 12:18 PM Ticket #18311 (Error in glBufferData) closed by
- nonchimerax: OpenGL out of memory error in glBufferData() trying to allocate just 3 …
- 11:55 AM Ticket #18310 (Crash on Mac waking from sleep) closed by
- duplicate
- 11:50 AM Ticket #18309 (Subject: Issue with /tmp directory not found when running Dock Prep in ...) closed by
- not a bug: Hi Antoine, Thanks for reporting this problem. It is basically …
- 11:35 AM Ticket #18308 (Crash in garbage collection) closed by
- duplicate
- 11:34 AM Ticket #18307 (Crash moving window between screens) closed by
- duplicate
- 11:29 AM Ticket #18305 (Crash in event loop) closed by
- can't reproduce
- 10:48 AM Ticket #18304 (mshMIGPerform crash) closed by
- duplicate: As per #18238, hopefully fixed in newer versions of Qt
- 8:43 AM Ticket #18312 (Crash in Atom::set_alt_loc reading PDB) created by
- […]
- 8:43 AM Ticket #18311 (Error in glBufferData) created by
- […]
- 8:34 AM Ticket #18310 (Crash on Mac waking from sleep) created by
- […]
- 7:56 AM Ticket #18309 (Subject: Issue with /tmp directory not found when running Dock Prep in ...) created by
- […]
- 4:24 AM Ticket #18308 (Crash in garbage collection) created by
- […]
- 1:38 AM Ticket #18307 (Crash moving window between screens) created by
- […]
Jul 28, 2025:
- 11:51 PM Ticket #18306 ('pip install pyKVFinder' fails with empty error message) created by
- […]
- 11:48 PM Ticket #18305 (Crash in event loop) created by
- […]
- 11:47 PM Ticket #18304 (mshMIGPerform crash) created by
- […]
- 5:48 PM Ticket #18303 (Crash in Qt event loop during recording movie) created by
- […]
- 4:41 PM Ticket #18302 (Crash in multiply_matrix_lists) created by
- […]
- 4:13 PM Dev2025-7-28 edited by
- (diff)
- 4:12 PM Dev2025-7-28 edited by
- (diff)
- 3:02 PM Dev2025-7-28 edited by
- (diff)
- 3:01 PM Dev2025-7-28 edited by
- (diff)
- 3:01 PM Ticket #18297 (kvfinder: self._positions is None) closed by
- fixed: Had to resort to patching the symptoms of the problem. Fix: …
- 2:28 PM Ticket #18275 (Crash in Qt in Model Panel _fill_tree()) closed by
- can't reproduce: Crash in QTreeWidget.clear(). Seems like a Qt problem.
- 1:57 PM Ticket #18282 (Crash in ChemGroup find_nonring_NR2(), no Log) closed by
- can't reproduce: Looked at the code for find_nonring_NR2 and nothing jumps out. I …
- 1:29 PM Ticket #18301 (MemoryError opening mmCIF files) closed by
- duplicate
- 1:06 PM Ticket #18301 (MemoryError opening mmCIF files) created by
- […]
- 11:39 AM Ticket #18300 (ViewDock suggestions) created by
- Hi ChimeraX team! I would like to thank you for all the magnificent …
- 11:39 AM Ticket #18286 (Device loss detected in Present()) closed by
- can't reproduce: Crash during expose event trying to make status line opengl context …
- 11:36 AM Ticket #18285 (Crash on Mac waking from sleep) closed by
- duplicate
- 11:19 AM Ticket #18299 (Crash on exit) closed by
- duplicate: From before the fix going in
- 11:18 AM Ticket #18298 (Crash moving window between screens) closed by
- duplicate
- 11:05 AM Ticket #18296 ('MRCGrid' object has no attribute 'dicom_data') closed by
- duplicate
- 11:02 AM Ticket #18294 (Crash on Mac waking from sleep) closed by
- duplicate
- 11:01 AM Ticket #18293 (Crash on exit) closed by
- can't reproduce: From before the workaround went in
- 10:57 AM Ticket #18292 (Crash in garbage collection) closed by
- duplicate
- 10:56 AM Ticket #18291 (Crash in QDockWidget handling of event) closed by
- can't reproduce
- 10:52 AM Ticket #18290 (XTC file with Unicode path) closed by
- duplicate: Duplicate of #16493; xdrfile 1.1.4 is still the latest release.
- 10:46 AM Ticket #18289 (Crash in event loop) closed by
- duplicate: Duplicate of #18288
- 10:44 AM Ticket #18288 (Crash in event loop) closed by
- can't reproduce: Possibly running an open/save dialog, thought that's based on a …
- 10:40 AM Ticket #18287 (Attempt to install Clipper 1.9 into 1.9 release candidate) closed by
- not a bug
- 10:31 AM Ticket #18284 ('MRCGrid' object has no attribute 'dicom_data') closed by
- duplicate
- 8:08 AM Ticket #18299 (Crash on exit) created by
- […]
- 7:17 AM Ticket #18298 (Crash moving window between screens) created by
- […]
- 1:04 AM Ticket #18297 (kvfinder: self._positions is None) created by
- […]
Jul 27, 2025:
- 11:05 PM Ticket #18296 ('MRCGrid' object has no attribute 'dicom_data') created by
- […]
- 6:41 AM Ticket #18295 (SEQCROW: trouble reading ORCA output file) created by
- […]
- 5:51 AM Ticket #18294 (Crash on Mac waking from sleep) created by
- […]
- 5:35 AM Ticket #18293 (Crash on exit) created by
- […]
- 12:09 AM Ticket #18292 (Crash in garbage collection) created by
- […]
Jul 26, 2025:
- 11:32 PM Ticket #18291 (Crash in QDockWidget handling of event) created by
- […]
- 7:28 PM Ticket #18290 (XTC file with Unicode path) created by
- […]
- 9:32 AM Ticket #18289 (Crash in event loop) created by
- […]
- 9:30 AM Ticket #18288 (Crash in event loop) created by
- […]
- 1:08 AM Ticket #18287 (Attempt to install Clipper 1.9 into 1.9 release candidate) created by
- […]
- 12:53 AM Ticket #18286 (Device loss detected in Present()) created by
- […]
Jul 25, 2025:
- 7:02 PM Ticket #18285 (Crash on Mac waking from sleep) created by
- […]
- 2:00 PM Ticket #18284 ('MRCGrid' object has no attribute 'dicom_data') created by
- […]
- 12:39 PM Ticket #16557 (Crash on Mac waking from sleep) closed by
- duplicate
- 12:34 PM Ticket #18016 (crossfade: images do not match) closed by
- fixed: Fixed. This error occurs when resizing the ChimeraX main window while …
- 12:21 PM Ticket #18139 (Some kind of crash involving AlphaFold JSON) closed by
- can't reproduce: No response from reporter.
- 12:20 PM Ticket #18085 (Boltz subprocess: Access is denied) closed by
- nonchimerax: Perhaps using a different boltz results directory worked. No response …
- 12:18 PM Ticket #18086 (alphafold pae: JSONDecodeError (DropBox)) closed by
- nonchimerax: No response from reporter.
- 12:17 PM Ticket #18088 (Error in glGetFramebufferAttachmentParameteriv) closed by
- can't reproduce: Graphics error on startup during expose event trying to show statusbar.
- 12:16 PM Ticket #18182 (Warnings in log: Mismatch between Cocoa and Carbon) closed by
- can't reproduce: No response from reporter.
- 12:16 PM Ticket #18203 (Crash moving window between screens) closed by
- duplicate: No response from reporter.
- 12:15 PM Ticket #18209 (Crash on Mac waking from sleep) closed by
- duplicate: No response from reporter.
- 12:14 PM Ticket #18179 (Log not shown at startup?) closed by
- can't reproduce: No response from reporter.
- 12:11 PM Ticket #17970 (Windows PyPi OpenMM: no CUDA) closed by
- fixed: 1.10.1 is out sans nvidia libraries on Linux, but with the …
- 12:00 PM Ticket #18281 (Out of memory in glTexImage2D at startup on Windows) closed by
- nonchimerax
- 11:58 AM Ticket #18277 (Symbol not found: scipy/linalg/_fblas.cpython-311-darwin.so) closed by
- duplicate: Because this ticket uses an even earlier 1.10 daily build than #17079, …
- 11:47 AM Ticket #18276 (OpenGL out of memory during startup on Linux, remote display) closed by
- nonchimerax: Probably caused by broken remote display (DISPLAY=:1).
- 11:43 AM Ticket #18274 (Restoring session: TypeError: 'builtin_function_or_method' object is ...) closed by
- duplicate: Fixed on April 15, 2025, fix in ChimeraX 1.10. Error restoring …
- 11:39 AM Ticket #18273 (Crash in NSAccessibilityEntryPointIsAccessibilityElement on Mac) closed by
- duplicate
- 11:37 AM Ticket #18272 (failure trying to run boltz-2) closed by
- fixed
- 8:12 AM Ticket #18283 (Missing ChimeraX core static library on Mac) created by
- […]
- 6:30 AM Ticket #18282 (Crash in ChemGroup find_nonring_NR2(), no Log) created by
- […]
- 6:14 AM Ticket #18281 (Out of memory in glTexImage2D at startup on Windows) created by
- […]
- 3:47 AM Ticket #18280 (Crash in Qt waking from sleep on Mac, multiple displays) created by
- […]
- 3:20 AM Ticket #18279 (Building ISOLDE does not use new ISOLDE version number) created by
- […]
- 3:03 AM Ticket #18278 (SEQCROW: unable to open orca.out as a ORCA output file) created by
- […]
- 12:04 AM Ticket #18277 (Symbol not found: scipy/linalg/_fblas.cpython-311-darwin.so) created by
- […]
Jul 24, 2025:
- 11:39 PM Ticket #18276 (OpenGL out of memory during startup on Linux, remote display) created by
- […]
- 11:31 PM Ticket #18275 (Crash in Qt in Model Panel _fill_tree()) created by
- […]
- 8:10 PM Ticket #18274 (Restoring session: TypeError: 'builtin_function_or_method' object is ...) created by
- […]
- 6:35 PM Ticket #18273 (Crash in NSAccessibilityEntryPointIsAccessibilityElement on Mac) created by
- […]
- 4:25 PM Ticket #18263 (Crash at startup) closed by
- limitation: Possible duplicate of #18227. ChimeraX does not work well with …
- 4:09 PM Ticket #18227 (Ubuntu on Wayland login session gets Mesa driver even when Nvidia installed) closed by
- limitation: In Ubuntu 24.04, ChimeraX does not see the Nvidia driver if using Wayland.
- 4:00 PM Ticket #18272 (failure trying to run boltz-2) created by
- […]
- 3:51 PM Ticket #18270 (Crash on Mac waking from sleep) closed by
- duplicate: Thanks for the info. Those are the steps that produced many crashes …
- 3:28 PM Ticket #18271 (KVFinder on old MacOS) closed by
- limitation: Hi Haiyu, Unfortunately, the underlying pyKVFinder program that …
- 3:25 PM Ticket #18269 (Crash moving window between screens) closed by
- duplicate: The ChimeraX bug report panel says what we know about this crash: …
- 2:55 PM Ticket #18271 (KVFinder on old MacOS) created by
- […]
- 2:10 PM ChangeLog edited by
- (diff)
- 2:05 PM Ticket #18270 (Crash on Mac waking from sleep) created by
- […]
- 1:59 PM Ticket #18269 (Crash moving window between screens) created by
- […]
- 12:25 PM ChangeLog edited by
- (diff)
- 12:07 PM Ticket #18259 (NIH preset fails on structure with no chains) closed by
- fixed
- 12:00 PM Ticket #18264 (TabbedToolbar.add_button() got an unexpected keyword argument 'darkIcon') closed by
- can't reproduce: Line number tool.py:206 in traceback don't match source code from that …
- 11:55 AM Ticket #18258 (Destroying dock widget initializes QFontComboBox type?) closed by
- can't reproduce: Looks like a register has a value "init_type_QFontComboBox". Maybe …
- 11:54 AM Ticket #18268 (Crash in garbage collection) closed by
- duplicate
- 11:53 AM Ticket #18268 (Crash in garbage collection) created by
- […]
- 11:46 AM Ticket #18256 (Saving movie: No space left on device) closed by
- fixed: I added an clearer error message without the traceback saying "Out of …
- 11:30 AM Ticket #18253 (The GPU device instance has been suspended) closed by
- nonchimerax: Google suggests "COM error 0x887a0005" and "The GPU device instance …
- 11:29 AM Ticket #18267 (AlphaFold JSON opened as MOLE) closed by
- duplicate: Old ChimeraX
- 11:28 AM Ticket #18266 (Destroying dock widget initializes QFontComboBox type?) closed by
- duplicate: Duplicate of #18258
- 11:18 AM Ticket #18265 (ISOLDE simulation: No space left on device) closed by
- nonchimerax: Hi Yvonne, The "No space left on device" errors means that you ran …
- 11:05 AM Ticket #18261 (Crash in event loop) closed by
- can't reproduce
- 11:04 AM Ticket #18260 (Unknown crash in Qt event loop after AlphaFold prediction completed) closed by
- can't reproduce
- 10:53 AM Ticket #18257 (Crash in swap_buffers) closed by
- can't reproduce
- 10:32 AM Ticket #18254 (ffmpeg: Permission denied) closed by
- duplicate
- 9:17 AM Ticket #18267 (AlphaFold JSON opened as MOLE) created by
- […]
- 8:31 AM Ticket #18266 (Destroying dock widget initializes QFontComboBox type?) created by
- […]
- 4:09 AM Ticket #18265 (ISOLDE simulation: No space left on device) created by
- […]
- 1:11 AM Ticket #18264 (TabbedToolbar.add_button() got an unexpected keyword argument 'darkIcon') created by
- […]
- 12:43 AM Ticket #18263 (Crash at startup) created by
- […]
Jul 23, 2025:
- 7:51 PM Ticket #18262 (ArtiaX: 'list' object is not callable) created by
- […]
- 7:38 PM Ticket #18261 (Crash in event loop) created by
- […]
- 6:01 PM ChangeLog edited by
- (diff)
- 5:34 PM Ticket #18260 (Unknown crash in Qt event loop after AlphaFold prediction completed) created by
- […]
- 5:15 PM Ticket #18259 (NIH preset fails on structure with no chains) created by
- […]
- 3:52 PM Ticket #18258 (Destroying dock widget initializes QFontComboBox type?) created by
- […]
- 2:49 PM Ticket #18257 (Crash in swap_buffers) created by
- […]
- 1:38 PM Ticket #18256 (Saving movie: No space left on device) created by
- […]
- 12:36 PM Ticket #18255 (Need to handle "Invalid histogram value" error so that it does not ...) created by
- […]
- 12:14 PM Ticket #18254 (ffmpeg: Permission denied) created by
- […]
- 11:49 AM Ticket #18253 (The GPU device instance has been suspended) created by
- […]
- 11:29 AM Ticket #18250 (volume splitbyzone: ArrayMemoryError) closed by
- limitation: Out of memory error. Tried to split map by color zone. 0.5 GB map. …
- 11:20 AM Ticket #18246 (AlphaFold JSON read as MOLE) closed by
- not a bug: Newer ChimeraX versions open .json as AlphaFold PAE format by default …
- 10:25 AM Ticket #18251 (Crash opening .cif) closed by
- can't reproduce: Need errant file to reproduce.
- 9:56 AM Ticket #18252 (Crash in garbage collection) closed by
- can't reproduce: Was disposing of a QFileDialog during garbage collection
- 9:48 AM Ticket #18248 (Crash reading XTC file) closed by
- can't reproduce: No indication what went wrong in the xtc library. Perhaps out of memory?
- 9:45 AM Ticket #18247 (AlphaFold JSON read as MOLE) closed by
- duplicate
- 8:16 AM Ticket #18252 (Crash in garbage collection) created by
- […]
- 7:57 AM Ticket #18251 (Crash opening .cif) created by
- […]
- 2:53 AM Ticket #18250 (volume splitbyzone: ArrayMemoryError) created by
- […]
- 2:42 AM Ticket #18249 (Crash destroying OpenGL context on exit) created by
- […]
Jul 22, 2025:
- 9:55 PM Ticket #18248 (Crash reading XTC file) created by
- […]
- 9:11 PM Ticket #18247 (AlphaFold JSON read as MOLE) created by
- […]
- 8:59 PM Ticket #18246 (AlphaFold JSON read as MOLE) created by
- […]
- 8:29 PM Ticket #18245 (ChimeraX hangs recomputing RMSD headers for sequence viewer when ...) created by
- […]
- 3:42 PM Dev2025-7-28 edited by
- (diff)
- 1:58 PM Ticket #18242 (Save movie: No space left on device) closed by
- limitation: Out of disk space recording a movie.
- 1:32 PM Ticket #18244 (Save movie: No space left on device) closed by
- duplicate
- 1:30 PM Ticket #18243 (Save movie: No space left on device) closed by
- duplicate
- 1:29 PM Ticket #18244 (Save movie: No space left on device) created by
- […]
- 1:13 PM Ticket #18243 (Save movie: No space left on device) created by
- […]
- 1:13 PM Ticket #18242 (Save movie: No space left on device) created by
- […]
- 11:27 AM Dev2025-7-28 created by
- 11:27 AM DeveloperMeetings edited by
- (diff)
- 9:26 AM Ticket #18226 (Crash using open/save dialog) closed by
- can't reproduce: Again thanks for the info. Unfortunately that means that it isn't …
- 9:23 AM Ticket #18241 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:22 AM Ticket #18240 (Proofpoint Essentials - Quarantine Digest) closed by
- not a bug
- 9:22 AM Ticket #18239 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:20 AM Ticket #18238 (mshMIGPerform crash) closed by
- can't reproduce: Similar to #17777
- 9:16 AM Ticket #18236 (Crash using open/save dialog) closed by
- can't reproduce
- 6:23 AM Ticket #18241 (Crash on Mac waking from sleep) created by
- […]
- 5:04 AM Ticket #18240 (Proofpoint Essentials - Quarantine Digest) created by
- […]
- 1:18 AM Ticket #18239 (Crash on Mac waking from sleep) created by
- […]
Jul 21, 2025:
- 9:29 PM Ticket #18238 (mshMIGPerform crash) created by
- […]
- 6:07 PM Ticket #18221 (Profile Grid crash on Windows) closed by
- fixed: Fix: …
- 4:03 PM Ticket #18237 (Show white-on-black SVGs for segmentations controls when in dark mode) created by
- 3:53 PM Ticket #18236 (Crash using open/save dialog) created by
- […]
- 3:38 PM Dev2025-7-21 edited by
- (diff)
- 3:38 PM Dev2025-7-21 edited by
- (diff)
- 3:37 PM Dev2025-7-21 edited by
- (diff)
- 2:53 PM Dev2025-7-21 edited by
- (diff)
- 2:02 PM Ticket #18235 (Crash on Mac waking from sleep) closed by
- duplicate
- 2:02 PM Ticket #18234 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by
- duplicate
- 1:56 PM Ticket #18231 (mshMIGPerform crash) closed by
- can't reproduce: Similar to #17777
- 1:55 PM Ticket #18230 (mshMIGPerform crash) closed by
- can't reproduce: Similar to #17777
- 1:53 PM Ticket #18229 (ffmpeg: Permission denied) closed by
- duplicate: Hi Wenhe, Thanks for reporting this problem. It will be fixed in the …
- 1:48 PM Ticket #18235 (Crash on Mac waking from sleep) created by
- […]
- 1:48 PM Ticket #18228 (Crash on Mac waking from sleep) closed by
- duplicate
- 1:31 PM Ticket #18234 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by
- […]
- 1:26 PM Ticket #18225 (Crash in event loop in QDockWidget::event) closed by
- can't reproduce: Was showing AlphaFold tool at the time
- 12:57 PM Dev2025-7-21 edited by
- (diff)
- 12:54 PM Ticket #18232 (Front center of rotation problem with Acer 3D display) closed by
- fixed: Fixed. Used the actual openxr reported field of view which was 45 …
- 12:46 PM Ticket #18224 (Session restore: KeyError: "combine") closed by
- duplicate: Duplicate of #17081; they all seem to involve volumes not being restored
- 12:38 PM Ticket #18223 (Profile Grid crash on Windows) closed by
- duplicate
- 12:37 PM Ticket #18233 (pyproject.toml: tool.chimerax.extra-files fails on second run) created by
- […]
- 12:35 PM Ticket #18220 (Unsupported scale factor detected on Display) closed by
- nonchimerax: The crash was a typical Apple Intel graphics driver crash. I don't …
- 12:35 PM Ticket #18222 (Profile Grid crash on Windows) closed by
- duplicate
- 12:09 PM Ticket #18232 (Front center of rotation problem with Acer 3D display) created by
- […]
- 12:07 PM Ticket #18219 (ChimeraX bug report submission) closed by
- not a bug
Note:
See TracTimeline
for information about the timeline view.
