volume splitbyzone: ArrayMemoryError

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        Windows-10-10.0.26100
ChimeraX Version: 1.8.dev202401142228 (2024-01-14 22:28:37 UTC)
Description
(Describe the actions that caused this problem to occur here)

Log:
Startup Messages  
---  
warnings | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle  
Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with
that from NMRSTAR bundle  
  
UCSF ChimeraX version: 1.8.dev202401142228 (2024-01-14)  
© 2016-2024 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open C:\Users\User\Desktop\Biofisika\SLC44A1\images\TM_2.cxs format session

No such file/path: C:\Users\User\Desktop\Biofisika\SLC44A1\images\TM_2.cxs  

> open C:\Users\User\Desktop\Biofisika\SLC44A1\cryo-
> EM\phenix\slc44a1_monomer\RealSpaceRefine_78\slc44a1_monomer_merged_J574_real_space_refined_073-coot-2_real_space_refined_078.pdb
> format pdb

Chain information for
slc44a1_monomer_merged_J574_real_space_refined_073-coot-2_real_space_refined_078.pdb
#1  
---  
Chain | Description  
A | No description available  
  

> open C:\Users\User\Desktop\Biofisika\SLC44A1\cryo-
> EM\maps\monomer\cryosparc_P150_J574_008_volume_map_sharp.mrc format mrc

Opened cryosparc_P150_J574_008_volume_map_sharp.mrc as #2, grid size
480,480,480, pixel 0.646, shown at level 0.0309, step 2, values float32  

> rainbow

> volume #2 level 0.05997

> color #2 #dadadaff models

> volume #2 level 0.08423

> volume #2 level 0.0825

> set bgColor white

> set bgColor black

> set bgColor white

> color zone #2 near #1 distance 2.5

> lighting soft

> graphics silhouettes true

> surface dust #2 size 6.46

> select /A:713@C38

1 atom, 1 residue, 1 model selected  

> select /A:713

38 atoms, 37 bonds, 1 residue, 1 model selected  

> hide #!2 models

> select /A:713 blue

Expected a keyword  

> color sel blue

> color sel light blue

> color sel purple

> color sel marine

Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
'fromcartoons', 'fromribbons', or 'random' or a keyword  

> color sel marin

Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
'fromcartoons', 'fromribbons', or 'random' or a keyword  

> color sel ocean

Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
'fromcartoons', 'fromribbons', or 'random' or a keyword  

> color sel hot pink

> color sel pink

> color sel dodger blue

> color sel byhetero

> color sel cyan

> color sel byhetero

> color sel deep sky blue

> color sel byhetero

> select add #1

5131 atoms, 5262 bonds, 621 residues, 1 model selected  

> color sel byhetero

> select subtract #1

Nothing selected  

> select /A:713

38 atoms, 37 bonds, 1 residue, 1 model selected  

> show #!2 models

> color #2 #dadada

> select clear

> transparency 50

> color #2 #dfdfdfff models

> color #2 #dededeff models

> color #2 #dadadaff models

> color #2 #cbcbcbff models

> transparency 50

> transparecy #2 30

Unknown command: transparecy #2 30  

> transparecy 30

Unknown command: transparecy 30  

> transparecy 30 target s

Unknown command: transparecy 30 target s  

> transparency 30 target s

> volume #2 level 0.1068

> volume #2 level 0.825

> volume #2 level 0.0825

> color zone #2 near #1 distance 2

> transparency 0

> transparency 50

> color byhetero

> color zone #2 near #1 distance 1.5

> transparency 0

> volume #2 level 0.1092

> transparency 0

> color zone #2 near #1 distance 1.5

> volume #2 level 0.1

> transparency 50

> transparency 0

> transparency 50

> select /A:498

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select /A:499

8 atoms, 7 bonds, 1 residue, 1 model selected  

> select /A:498

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select add /A:499

17 atoms, 15 bonds, 2 residues, 1 model selected  

> show sel atoms

> select clear

> volume #2 level 0.105

> transparency 30 target s

> volume #2 level 0.103

> volume #2 level 0.105

> volume #2 color #bddbffb3

> volume #2 color #6cb8f7b3

> volume #2 color #bddbffb3

> volume #2 color #6cb8f7b3

> volume #2 color #bddbffb3

> volume #2 color #ffff7fb3

> volume #2 color #ffffffb3

> volume #2 color #dadadab3

> volume #2 color #bddbffb3

> volume #2 color #6cb8f7b3

> volume #2 color #dadadab3

> rainbow

> select /A:713

38 atoms, 37 bonds, 1 residue, 1 model selected  

> color sel deep sky blue

> color zone #2 near #1 distance 1.5

> volume #2 level 0.07104

> color zone #2 near #1 distance 2

> volume #2 level 0.09045

> volume #2 level 0.0105

> volume #2 level 0.105

> color zone #2 near #1 distance 1.5

> color zone #2 near #1 distance 2

> transparency 0

> transparency 50

> color sel byhetero

> select add #1

5131 atoms, 5262 bonds, 621 residues, 1 model selected  

> color sel byhetero

> select subtract #1

Nothing selected  

> view

> select /A:713

38 atoms, 37 bonds, 1 residue, 1 model selected  

> view sel

> select clear

> ui tool show "Side View"

> view orient

[Repeated 1 time(s)]

> view

> view orient

> select down

Nothing selected  

> select down

Nothing selected  

> transparency 50 target s

> transparency 40 target s

> transparency 30 target s

> transparency 50 target s

> select add #2

4 models selected  

> select subtract #2

Nothing selected  

> color zone #2 near #1 distance 2

> volume #2 level 0.09045

> view

> color #1 #5892ffb3

> color zone #2 near #1 distance 2

> transparency 0

> volume splitbyzone #2

Volume cryosparc_P150_J574_008_volume_map_sharp.mrc #2 does not have zone
coloring  

> volume splitbycolor #2

Expected a density maps specifier or a keyword  

> volume splitbyzone #2

Volume cryosparc_P150_J574_008_volume_map_sharp.mrc #2 does not have zone
coloring  

> color zone #2 near #1 distance 2

> transparency 0

> volume splitbyzone #2

Volume cryosparc_P150_J574_008_volume_map_sharp.mrc #2 does not have zone
coloring  

> color zone #2 near #1 distance 2

> volume splitbyzone #2

Opened cryosparc_P150_J574_008_volume_map_sharp.mrc 0 as #3.1, grid size
480,480,480, pixel 0.646, shown at level 0.0904, step 1, values float32  
Opened cryosparc_P150_J574_008_volume_map_sharp.mrc 1 as #3.2, grid size
480,480,480, pixel 0.646, shown at level 0.0904, step 1, values float32  

> transparency 0

> volume #3.1 step 2

> volume #3.2 step 2

> hide #!3 models

> show #!3 models

> hide #1 models

> show #1 models

> hide #!3 models

> hide #!3.1 models

> hide #!3.2 models

> select add #1

5131 atoms, 5262 bonds, 621 residues, 1 model selected  

> transparency 0 target r

> select clear

> show #!3.2 models

> show #!3.1 models

> hide #!3.1 models

> show #!3.1 models

> hide #!3.1 models

> rainbow

> color zone #3.2 near #1 distance 2

> tansparency 0 target r

Unknown command: tansparency 0 target r  

> tansparency 0 target c

Unknown command: tansparency 0 target c  

> select add #1

5131 atoms, 5262 bonds, 621 residues, 1 model selected  

> tansparency 0 target sel

Unknown command: tansparency 0 target sel  

> tansparency 0

Unknown command: tansparency 0  

> hide #!3.2 models

> tansparency 0 target c

Unknown command: tansparency 0 target c  

> transparency 0 target c

> transparency 0 target sel

Invalid "target" argument: Character 'e' is not an allowed target, must be one
of acrsbmpfl  

> transparency 0 sel

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> transparency 0 All

> show #!3.2 models

> select clear

> transparency 50 target s

> show #!3.1 models

> hide #!3.1 models

> volume #3.2 level 0.105

> volume #3.2 level 0.0904

> volume #3.2 level 0.1074

> color zone #2 near #1 distance 2.5

> color #1 #55aaffff

> color zone #2 near #1 distance 2.5

> color zone #2 near #1 distance 2

> color zone #2 near #1 distance 2.5

> volume splitbyzone #2

Opened cryosparc_P150_J574_008_volume_map_sharp.mrc 0 as #4.1, grid size
480,480,480, pixel 0.646, shown at level 0.0904, step 1, values float32  
Opened cryosparc_P150_J574_008_volume_map_sharp.mrc 1 as #4.2, grid size
480,480,480, pixel 0.646, shown at level 0.0904, step 1, values float32  

> volume #4.2 step 2

> color zone #2 near #1 distance 2

[Repeated 1 time(s)]

> volume splitbyzone #2

Opened cryosparc_P150_J574_008_volume_map_sharp.mrc 0 as #5.1, grid size
480,480,480, pixel 0.646, shown at level 0.0904, step 1, values float32  
Opened cryosparc_P150_J574_008_volume_map_sharp.mrc 1 as #5.2, grid size
480,480,480, pixel 0.646, shown at level 0.0904, step 1, values float32  

> volume #5.2 level 0.06247

> volume #5.2 step 2

> volume #5.2 level 0.05003

> transparency #5.2.1 50

> transparency #4.2.1 50

> volume #5.2 level 0.05749

> volume #5.2 level 0.0749

> volume #5.2 level 0.075

> close #4

> rainbow

> color byhetero

> volume #5.2 level 0.0749

> volume #5.2 level 0.08733

> hide #!5.2 models

> show #!5.2 models

> color zone #2 near #1 distance 2.5

> volume splitbyzone #2

Traceback (most recent call last):  
File "C:\Program Files\ChimeraX_2\bin\Lib\site-
packages\chimerax\cmd_line\tool.py", line 319, in execute  
cmd.run(cmd_text)  
File "C:\Program Files\ChimeraX_2\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 2908, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX_2\bin\Lib\site-
packages\chimerax\surface\colorzone.py", line 378, in
split_volumes_by_color_zone  
vlist.extend(split_volume_by_color_zone(v))  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX_2\bin\Lib\site-
packages\chimerax\surface\colorzone.py", line 321, in
split_volume_by_color_zone  
grids = split_zones_by_color(volume, zc.points, zc.point_colors, zc.distance)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX_2\bin\Lib\site-
packages\chimerax\surface\colorzone.py", line 362, in split_zones_by_color  
g = masked_grid_data(sg, mask, m)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX_2\bin\Lib\site-
packages\chimerax\map_data\arrays.py", line 341, in masked_grid_data  
masked = zeros(matrix.shape, matrix.dtype)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
numpy.core._exceptions._ArrayMemoryError: Unable to allocate 422. MiB for an
array with shape (480, 480, 480) and data type float32  
  
numpy.core._exceptions._ArrayMemoryError: Unable to allocate 422. MiB for an
array with shape (480, 480, 480) and data type float32  
  
File "C:\Program Files\ChimeraX_2\bin\Lib\site-
packages\chimerax\map_data\arrays.py", line 341, in masked_grid_data  
masked = zeros(matrix.shape, matrix.dtype)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 571.96
OpenGL renderer: NVIDIA GeForce RTX 3050 Ti Laptop GPU/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Python: 3.11.2
Locale: es_ES.cp1252
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: windows

Manufacturer: ASUSTeK COMPUTER INC.
Model: ASUS TUF Gaming F15 FX506HE_FX506HE
OS: Microsoft Windows 11 Home (Build 26100)
Memory: 16,888,246,272
MaxProcessMemory: 137,438,953,344
CPU: 16 11th Gen Intel(R) Core(TM) i7-11800H @ 2.30GHz
OSLanguage: es-ES

Installed Packages:
    alabaster: 0.7.16
    appdirs: 1.4.4
    asttokens: 2.4.1
    Babel: 2.14.0
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    blosc2: 2.0.0
    build: 0.10.0
    certifi: 2023.11.17
    cftime: 1.6.3
    charset-normalizer: 3.3.2
    ChimeraX-AddCharge: 1.5.15
    ChimeraX-AddH: 2.2.5
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.4.3
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.12.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.1.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.52
    ChimeraX-AtomicLibrary: 12.1.4
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.11
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.3.2
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-Clipper: 0.22.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.5
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.8.dev202401142228
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.3
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ISOLDE: 1.7.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-Label: 1.1.9
    ChimeraX-LigandRecognizer: 0.2
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.1.6
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.2
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.6.1
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12.1
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.15
    ChimeraX-ModelPanel: 1.5
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.1
    ChimeraX-NMRSTAR: 1.0.1
    ChimeraX-NRRD: 1.1
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.13.1
    ChimeraX-PDB: 2.7.3
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.2.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.2
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.11.1
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.2
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.15
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.33.5
    ChimeraX-uniprot: 2.3
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.3.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.3
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.1
    comtypes: 1.1.14
    contourpy: 1.2.0
    cxservices: 1.2.2
    cycler: 0.12.1
    Cython: 0.29.33
    debugpy: 1.8.0
    decorator: 5.1.1
    docutils: 0.19
    executing: 2.0.1
    filelock: 3.9.0
    fonttools: 4.47.2
    funcparserlib: 2.0.0a0
    glfw: 2.6.4
    grako: 3.16.5
    h5py: 3.10.0
    html2text: 2020.1.16
    idna: 3.6
    ihm: 0.38
    imagecodecs: 2023.9.18
    imagesize: 1.4.1
    ipykernel: 6.23.2
    ipython: 8.14.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.1.1
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.2.0
    jupyter-core: 5.7.1
    jupyterlab-widgets: 3.0.9
    kiwisolver: 1.4.5
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.3
    matplotlib: 3.7.2
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.5.9
    netCDF4: 1.6.2
    networkx: 3.1
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.8
    numpy: 1.25.1
    openvr: 1.23.701
    packaging: 23.2
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pickleshare: 0.7.5
    pillow: 10.2.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 4.1.0
    prompt-toolkit: 3.0.43
    psutil: 5.9.5
    pure-eval: 0.2.2
    py-cpuinfo: 9.0.0
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.16.1
    pynmrstar: 3.3.2
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.2801
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
    PyQt6-commercial: 6.3.1
    PyQt6-Qt6: 6.3.2
    PyQt6-sip: 13.4.0
    PyQt6-WebEngine-commercial: 6.3.1
    PyQt6-WebEngine-Qt6: 6.3.2
    python-dateutil: 2.8.2
    pytz: 2023.3.post1
    pywin32: 305
    pyzmq: 25.1.2
    qtconsole: 5.4.3
    QtPy: 2.4.1
    RandomWords: 0.4.0
    requests: 2.31.0
    scipy: 1.11.1
    setuptools: 67.4.0
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.5
    sphinx: 6.1.3
    sphinx-autodoc-typehints: 1.22
    sphinxcontrib-applehelp: 1.0.8
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.6
    sphinxcontrib-htmlhelp: 2.0.5
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.7
    sphinxcontrib-serializinghtml: 1.1.10
    stack-data: 0.6.3
    superqt: 0.5.0
    tables: 3.8.0
    tcia-utils: 1.5.1
    tifffile: 2023.7.18
    tinyarray: 1.2.4
    tornado: 6.4
    traitlets: 5.9.0
    typing-extensions: 4.9.0
    tzdata: 2023.4
    urllib3: 2.1.0
    wcwidth: 0.2.13
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.9
    WMI: 1.5.1

[Tom Goddard]

Out of memory error. Tried to split map by color zone. 0.5 GB map. Probably had a lot of colors. Windows machine had 16 GB.