Opened 3 months ago
Closed 3 months ago
#18256 closed defect (fixed)
Saving movie: No space left on device
Reported by: | Owned by: | Tom Goddard | |
---|---|---|---|
Priority: | normal | Milestone: | |
Component: | Input/Output | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: macOS-15.4.1-arm64-arm-64bit ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC) Description (Describe the actions that caused this problem to occur here) Log: Startup Messages --- warnings | No presets found in custom preset folder /Users/mphill65/Python_Scripts/chimera_prests/.git Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with that from NMRSTAR bundle > alias rd ui mousemode right distance > alias rs ui mousemode right select > alias nmr1 hide #*.2-20 models > alias slall label $1 text > "{0.label_one_letter_code}{0.number}{0.insertion_code}" > alias lmearo label $1:thr,met,ala,leu,val,ile,phe,tyr text > "{0.label_one_letter_code}{0.number}{0.insertion_code}" > alias showbb show $1@N,C,CA,O,H; cartoon $1 suppress false; transparency $1 > 50 target c; hide $1:hoh > alias hidebb hide $1@N,C,CA,O,H target a; transparency $1 0 target c > alias sdist ui tool show Distances > alias showmet show $1:ile,leu,val,met,ala,thr target a; hide H; color $1:ile > paleturquoise target a; color $1:leu lightsalmon target a; color $1:val > khaki target a; color $1:met thistle target a; color $1:ala yellowgreen > target ab; color $1:thr aquamarine target a;color byhetero target a > alias showaro show $1:phe,tyr,his,trp target ab; hide H; color $1:phe plum > target a; color $1:tyr lightpink target a; color byhetero target a > alias csf cartoon $1 suppress false > alias rota swapaa interactive $1 $2 > alias phi information residue $1 attribute phi > alias psi information residue $1 attribute psi > alias chi1 information residue $1 attribute chi1 > alias chi2 information residue $1 attribute chi2 > alias dd distance delete > alias rd ui mousemode right distance > alias rs ui mousemode right select > alias nmr1 hide #*.2-20 models > alias slall label sel text > "{0.label_one_letter_code}{0.number}{0.insertion_code}" > alias lmearo label $1:thr,met,ala,leu,val,ile,phe,tyr text > "{0.label_one_letter_code}{0.number}{0.insertion_code}" > alias showbb show $1@N,C,CA,O,H; cartoon $1 suppress false; transparency $1 > 50 target c; hide $1:hoh > alias hidebb hide $1@N,C,CA,O,H target a; transparency $1 0 target c > alias sdist ui tool show Distances > alias showmet show $1:ile,leu,val,met,ala,thr target a; hide H; color $1:ile > paleturquoise target a; color $1:leu lightsalmon target a; color $1:val > khaki target a; color $1:met thistle target a; color $1:ala yellowgreen > target ab; color $1:thr aquamarine target a;color byhetero target a > alias showaro show $1:phe,tyr,his,trp target ab; hide H; color $1:phe plum > target a; color $1:tyr lightpink target a; color byhetero target a UCSF ChimeraX version: 1.6.1 (2023-05-09) © 2016-2023 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open plusACP-Mg.cxc > color name color0 rgb(254,217,118) Color 'color0' is opaque: rgb(99.6%, 85.1%, 46.3%) hex: #fed976 > color name color1 rgb(254,178,76) Color 'color1' is opaque: rgb(99.6%, 69.8%, 29.8%) hex: #feb24c > color name color2 rgb(253,141,60) Color 'color2' is opaque: rgb(99.2%, 55.3%, 23.5%) hex: #fd8d3c > color name color3 rgb(252,78,42) Color 'color3' is opaque: rgb(98.8%, 30.6%, 16.5%) hex: #fc4e2a > color name color4 rgb(189,0,38) Color 'color4' is opaque: rgb(74.1%, 0%, 14.9%) hex: #bd0026 > color name color5 rgb(150,0,0) Color 'color5' is opaque: rgb(58.8%, 0%, 0%) hex: #960000 > key color0:0.00 color1:1.00 color2:2.00 color3:3.00 color4:4.00 color5:5.00 > fontSize 1 colorTreatment distinct numericLabelSpacing equal size > 0.20000,0.03000 pos 0.75,0.03 > 2dlabels text "Δδ (¹³C ppm)" size 24 xpos 0.80 ypos 0.067 > open > /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb > maxModels 1 Summary of feedback from opening /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb --- warnings | Ignored bad PDB record found on line 1 REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ignored bad PDB record found on line 2 REMARK PdbStat -- PDB COORDINATES FOR ALL_KK_CNS.PDB, 20 MODEL/S ALL_KK_CNS.PDB Ignored bad PDB record found on line 3 REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ignored bad PDB record found on line 41 REMARK =============================================================== Ignored bad PDB record found on line 43 REMARK energies: -16069, 1401.86, 1612.22, 538.115, 2235.42 198 messages similar to the above omitted Chain information for ERK3_MK5_cya15nu_ref_ens.pdb #3 --- Chain | Description A | No description available B | No description available > hide #3 target a > rename #3 plusACP-Mg_CS_CMe > color #3 gray(150) > show nucleic > hide #3: protein|solvent|H target as > surface hidePatches > style (protein|nucleic|solvent) & @@draw_mode=0 stick Changed 0 atom styles > cartoon style modeHelix tube sides 20 > graphics silhouettes true > cartoon style radius 1.5 > set bgColor white > style :ala,leu,ile,val,met,thr ball Changed 2861 atom styles > color #3:48,175,263,279,296 color0 target a > color #3:48,133,306 color1 target a > color #3:77,194,285,310 color2 target a > color #3:92 color3 target a > color #3:111,217,218 color4 target a > color #3:129 color black > size stickRadius 0.27 Changed 7478 bond radii > size atomRadius 2.7 Changed 7403 atom radii > size :*@CA,CB,O*,N,C atomRadius 0.7 Changed 2528 atom radii > size :ala@CB atomRadius 2.7 Changed 23 atom radii > size :met@CG,SD atomRadius 0.7 Changed 26 atom radii > size :leu,ile@CG* atomRadius 0.7 Changed 120 atom radii > size :phe,try@CD*,CG*,CZ* atomRadius 0.7 Changed 56 atom radii > show #3:48,175,263,279,296,48,133,306,77,194,285,310,92,111,217,218,129 > target a > 2dlabels text 0.07 size 20 xpos 0.75 ypos 0.01 > 2dlabels text 0.09 size 20 xpos 0.785 ypos 0.01 > 2dlabels text 0.10 size 20 xpos 0.82 ypos 0.01 > 2dlabels text 0.11 size 20 xpos 0.855 ypos 0.01 > 2dlabels text 0.12 size 20 xpos 0.89 ypos 0.01 > 2dlabels text 0.13 size 20 xpos 0.925 ypos 0.01 > rename #2.2-7 id #2.1 > label #3:48,175,263,279,296,48,133,306,77,194,285,310,92,111,217,218,129 > text {0.label_one_letter_code}{0.number} > 2dlabels text "Δδ (¹H ppm)" size 24 xpos 0.80 ypos 0.067 > open > /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb > maxModels 1 Summary of feedback from opening /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb --- warnings | Ignored bad PDB record found on line 1 REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ignored bad PDB record found on line 2 REMARK PdbStat -- PDB COORDINATES FOR ALL_KK_CNS.PDB, 20 MODEL/S ALL_KK_CNS.PDB Ignored bad PDB record found on line 3 REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ignored bad PDB record found on line 41 REMARK =============================================================== Ignored bad PDB record found on line 43 REMARK energies: -16069, 1401.86, 1612.22, 538.115, 2235.42 198 messages similar to the above omitted Chain information for ERK3_MK5_cya15nu_ref_ens.pdb #4 --- Chain | Description A | No description available B | No description available > hide #4 target a > rename #4 plusACP-Mg_CS_HMe > color #4 gray(150) > show nucleic > hide #3: protein|solvent|H target as > surface hidePatches > style (protein|nucleic|solvent) & @@draw_mode=0 stick Changed 0 atom styles > cartoon style modeHelix tube sides 20 > graphics silhouettes true > cartoon style radius 1.5 > set bgColor white > style :ala,leu,ile,val,met,thr ball Changed 5722 atom styles > color #4:62,68,77,99,162,169,212,213,217,221,227,296,307,316 color0 target a > color > #4:51,62,66,69,83,99,106,111,129,133,169,218,221,223,241,244,289,296,310,316,323 > color1 target a > color #4:37,47,66,106,111,129,133,143,215,218,223,244,248,272,310,323 color2 > target a > color #4:48,248,272 color3 target a > color #4:271 color4 target a > color #4:263 color5 target a > size stickRadius 0.27 Changed 14956 bond radii > size atomRadius 2.7 Changed 14806 atom radii > size :*@CA,CB,O*,N,C atomRadius 0.7 Changed 5056 atom radii > size :ala@CB atomRadius 2.7 Changed 46 atom radii > size :met@CG,SD atomRadius 0.7 Changed 52 atom radii > size :leu,ile@CG* atomRadius 0.7 Changed 240 atom radii > size :phe,try@CD*,CG*,CZ* atomRadius 0.7 Changed 112 atom radii > show > #4:62,68,77,99,162,169,212,213,217,221,227,296,307,316,51,62,66,69,83,99,106,111,129,133,169,218,221,223,241,244,289,296,310,316,323,37,47,66,106,111,129,133,143,215,218,223,244,248,272,310,323,48,248,272,271,263 > target a > 2dlabels text 0.01 size 20 xpos 0.75 ypos 0.01 > 2dlabels text 0.01 size 20 xpos 0.785 ypos 0.01 > 2dlabels text 0.01 size 20 xpos 0.82 ypos 0.01 > 2dlabels text 0.01 size 20 xpos 0.855 ypos 0.01 > 2dlabels text 0.02 size 20 xpos 0.89 ypos 0.01 > 2dlabels text 0.02 size 20 xpos 0.925 ypos 0.01 > rename #2.3-8 id #2.2 > label > #4:62,68,77,99,162,169,212,213,217,221,227,296,307,316,51,62,66,69,83,99,106,111,129,133,169,218,221,223,241,244,289,296,310,316,323,37,47,66,106,111,129,133,143,215,218,223,244,248,272,310,323,48,248,272,271,263 > text {0.label_one_letter_code}{0.number} > 2dlabels text "Δδₐᵥₑ (HC ppm)" size 24 xpos 0.79 ypos 0.067 > open > /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb > maxModels 1 Summary of feedback from opening /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb --- warnings | Ignored bad PDB record found on line 1 REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ignored bad PDB record found on line 2 REMARK PdbStat -- PDB COORDINATES FOR ALL_KK_CNS.PDB, 20 MODEL/S ALL_KK_CNS.PDB Ignored bad PDB record found on line 3 REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ignored bad PDB record found on line 41 REMARK =============================================================== Ignored bad PDB record found on line 43 REMARK energies: -16069, 1401.86, 1612.22, 538.115, 2235.42 198 messages similar to the above omitted Chain information for ERK3_MK5_cya15nu_ref_ens.pdb #5 --- Chain | Description A | No description available B | No description available > hide #5 target a > rename #5 plusACP-Mg_CS_wavg_CMe > color #5 gray(150) > show nucleic > hide #5: protein|solvent|H target as > surface hidePatches > style (protein|nucleic|solvent) & @@draw_mode=0 stick Changed 0 atom styles > cartoon style modeHelix tube sides 20 > graphics silhouettes true > cartoon style radius 1.5 > set bgColor white > style :ala,leu,ile,val,met,thr ball Changed 8583 atom styles > color > #5:37,51,54,66,68,69,116,143,156,160,169,178,210,215,221,223,225,235,241,244,271,272,279,289,316,323 > color0 target a > color #5:48,77,133,175,194,263,279,296,306 color1 target a > color #5:77,92,217,218,285,310 color2 target a > color #5:111 color3 target a > color #5:129 color4 target a > size stickRadius 0.27 Changed 22434 bond radii > size atomRadius 2.7 Changed 22209 atom radii > size :*@CA,CB,O*,N,C atomRadius 0.7 Changed 7584 atom radii > size :ala@CB atomRadius 2.7 Changed 69 atom radii > size :met@CG,SD atomRadius 0.7 Changed 78 atom radii > size :leu,ile@CG* atomRadius 0.7 Changed 360 atom radii > size :phe,try@CD*,CG*,CZ* atomRadius 0.7 Changed 168 atom radii > show > #5:37,51,54,66,68,69,116,143,156,160,169,178,210,215,221,223,225,235,241,244,271,272,279,289,316,323,48,77,133,175,194,263,279,296,306,77,92,217,218,285,310,111,129 > target a > 2dlabels text 0.03 size 20 xpos 0.75 ypos 0.01 > 2dlabels text 0.04 size 20 xpos 0.785 ypos 0.01 > 2dlabels text 0.06 size 20 xpos 0.82 ypos 0.01 > 2dlabels text 0.07 size 20 xpos 0.855 ypos 0.01 > 2dlabels text 0.08 size 20 xpos 0.89 ypos 0.01 > 2dlabels text 0.10 size 20 xpos 0.925 ypos 0.01 > rename #2.4-9 id #2.3 > label > #5:37,51,54,66,68,69,116,143,156,160,169,178,210,215,221,223,225,235,241,244,271,272,279,289,316,323,48,77,133,175,194,263,279,296,306,77,92,217,218,285,310,111,129 > text {0.label_one_letter_code}{0.number} > 2dlabels text "1 – I ∕ I₀" size 24 xpos 0.82 ypos 0.066 margin 6 > open > /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb > maxModels 1 Summary of feedback from opening /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb --- warnings | Ignored bad PDB record found on line 1 REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ignored bad PDB record found on line 2 REMARK PdbStat -- PDB COORDINATES FOR ALL_KK_CNS.PDB, 20 MODEL/S ALL_KK_CNS.PDB Ignored bad PDB record found on line 3 REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ignored bad PDB record found on line 41 REMARK =============================================================== Ignored bad PDB record found on line 43 REMARK energies: -16069, 1401.86, 1612.22, 538.115, 2235.42 198 messages similar to the above omitted Chain information for ERK3_MK5_cya15nu_ref_ens.pdb #6 --- Chain | Description A | No description available B | No description available > hide #6 target a > rename #6 plusACP-Mg_Intensity_CMe > color #6 gray(150) > show nucleic > hide #6: protein|solvent|H target as > surface hidePatches > style (protein|nucleic|solvent) & @@draw_mode=0 stick Changed 0 atom styles > cartoon style modeHelix tube sides 20 > graphics silhouettes true > cartoon style radius 1.5 > set bgColor white > style :ala,leu,ile,val,met,thr ball Changed 11444 atom styles > color > #6:9,11,21,37,47,54,62,66,69,83,92,99,106,111,113,116,129,133,143,146,156,162,169,175,178,194,210,212,215,217,218,221,223,225,227,230,233,235,241,244,271,272,279,285,289,298,302,306,307,310,316,323 > color black > size stickRadius 0.27 Changed 29912 bond radii > size atomRadius 2.7 Changed 29612 atom radii > size :*@CA,CB,O*,N,C atomRadius 0.7 Changed 10112 atom radii > size :ala@CB atomRadius 2.7 Changed 92 atom radii > size :met@CG,SD atomRadius 0.7 Changed 104 atom radii > size :leu,ile@CG* atomRadius 0.7 Changed 480 atom radii > size :phe,try@CD*,CG*,CZ* atomRadius 0.7 Changed 224 atom radii > show > #6:9,11,21,37,47,54,62,66,69,83,92,99,106,111,113,116,129,133,143,146,156,162,169,175,178,194,210,212,215,217,218,221,223,225,227,230,233,235,241,244,271,272,279,285,289,298,302,306,307,310,316,323 > target a > 2dlabels text 13.53 size 20 xpos 0.75 ypos 0.01 > 2dlabels text 11.46 size 20 xpos 0.785 ypos 0.01 > 2dlabels text 9.39 size 20 xpos 0.82 ypos 0.01 > 2dlabels text 7.32 size 20 xpos 0.855 ypos 0.01 > 2dlabels text 5.24 size 20 xpos 0.89 ypos 0.01 > 2dlabels text 3.17 size 20 xpos 0.925 ypos 0.01 > rename #2.5-10 id #2.4 > label > #6:9,11,21,37,47,54,62,66,69,83,92,99,106,111,113,116,129,133,143,146,156,162,169,175,178,194,210,212,215,217,218,221,223,225,227,230,233,235,241,244,271,272,279,285,289,298,302,306,307,310,316,323 > text {0.label_one_letter_code}{0.number} > hide H > lighting gentle executed plusACP-Mg.cxc > hide #!6 models > hide #!4 models > hide #!3 models > hide #!2.4 models > hide #!2.2 models > hide #!2.1 models > color #5:342-473 purple > movie record > turn y 2 180 > wait 180 Traceback (most recent call last): File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site- packages/chimerax/core/triggerset.py", line 138, in invoke return self._func(self._name, data) File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site- packages/chimerax/movie/movie.py", line 172, in capture_image i.save(save_path, self.img_fmt) File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site- packages/PIL/Image.py", line 2353, in save save_handler(self, fp, filename) File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site- packages/PIL/PpmImagePlugin.py", line 324, in _save ImageFile._save(im, fp, [("raw", (0, 0) + im.size, 0, (rawmode, 0, 1))]) File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site- packages/PIL/ImageFile.py", line 505, in _save _encode_tile(im, fp, tile, bufsize, fh) File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site- packages/PIL/ImageFile.py", line 532, in _encode_tile s = encoder.encode_to_file(fh, bufsize) OSError: [Errno 28] No space left on device Error processing trigger "frame drawn": OSError: [Errno 28] No space left on device File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site- packages/PIL/ImageFile.py", line 532, in _encode_tile s = encoder.encode_to_file(fh, bufsize) See log for complete Python traceback. > movie encode /Users/mphill65/Desktop/movie2.mp4 Movie saved to /Users/mphill65/Desktop/movie2.mp4 OpenGL version: 4.1 Metal - 89.4 OpenGL renderer: Apple M2 Max OpenGL vendor: Apple Python: 3.9.11 Locale: en_US.UTF-8 Qt version: PyQt6 6.4.2, Qt 6.4.2 Qt runtime version: 6.4.3 Qt platform: cocoa Hardware: Hardware Overview: Model Name: Mac Studio Model Identifier: Mac14,13 Model Number: MQH73LL/A Chip: Apple M2 Max Total Number of Cores: 12 (8 performance and 4 efficiency) Memory: 32 GB System Firmware Version: 11881.121.1 OS Loader Version: 11881.101.1 Software: System Software Overview: System Version: macOS 15.4.1 (24E263) Kernel Version: Darwin 24.4.0 Time since boot: 26 days, 6 hours, 23 minutes Graphics/Displays: Apple M2 Max: Chipset Model: Apple M2 Max Type: GPU Bus: Built-In Total Number of Cores: 30 Vendor: Apple (0x106b) Metal Support: Metal 3 Displays: DELL U3223QE: Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition) UI Looks like: 3840 x 2160 @ 60.00Hz Main Display: Yes Mirror: Off Online: Yes Rotation: Supported DELL U3223QE: Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition) UI Looks like: 3840 x 2160 @ 60.00Hz Mirror: Off Online: Yes Rotation: Supported Installed Packages: alabaster: 0.7.13 appdirs: 1.4.4 appnope: 0.1.3 asttokens: 2.2.1 Babel: 2.12.1 backcall: 0.2.0 beautifulsoup4: 4.11.2 blockdiag: 3.0.0 build: 0.10.0 certifi: 2021.10.8 cftime: 1.6.2 charset-normalizer: 3.1.0 ChimeraX-AddCharge: 1.5.9.1 ChimeraX-AddH: 2.2.5 ChimeraX-AlignmentAlgorithms: 2.0.1 ChimeraX-AlignmentHdrs: 3.3.1 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.9.3 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.0.3 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.43.10 ChimeraX-AtomicLibrary: 10.0.6 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.3.2 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.1.2 ChimeraX-BondRot: 2.0.1 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.8 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.2.2 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.3.2 ChimeraX-ChangeChains: 1.0.2 ChimeraX-CheckWaters: 1.3.1 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.2.4 ChimeraX-ColorActions: 1.0.3 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.3 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.6.1 ChimeraX-CoreFormats: 1.1 ChimeraX-coulombic: 1.4.2 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2 ChimeraX-DistMonitor: 1.4 ChimeraX-DockPrep: 1.1.1 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1.1 ChimeraX-Hbonds: 2.4 ChimeraX-Help: 1.2.1 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-Label: 1.1.7 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.5 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.2 ChimeraX-Map: 1.1.4 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.0.12 ChimeraX-MDcrds: 2.6 ChimeraX-MedicalToolbar: 1.0.2 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.12 ChimeraX-MMTF: 2.2 ChimeraX-Modeller: 1.5.9 ChimeraX-ModelPanel: 1.3.7 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.0 ChimeraX-NRRD: 1.0 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.10.1 ChimeraX-PDB: 2.7.2 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.2 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.1 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 3.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.1 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.8.3 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.1.1 ChimeraX-ShowSequences: 1.0.1 ChimeraX-SideView: 1.0.1 ChimeraX-Smiles: 2.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.10.3 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.1.2 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1.2 ChimeraX-ToolshedUtils: 1.2.1 ChimeraX-Topography: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.28.4 ChimeraX-uniprot: 2.2.2 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.2 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.1 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.1.3 contourpy: 1.0.7 cxservices: 1.2.2 cycler: 0.11.0 Cython: 0.29.33 debugpy: 1.6.7 decorator: 5.1.1 docutils: 0.19 executing: 1.2.0 filelock: 3.9.0 fonttools: 4.39.3 funcparserlib: 1.0.1 grako: 3.16.5 h5py: 3.8.0 html2text: 2020.1.16 idna: 3.4 ihm: 0.35 imagecodecs: 2022.2.22 imagesize: 1.4.1 importlib-metadata: 6.6.0 ipykernel: 6.21.1 ipython: 8.10.0 ipython-genutils: 0.2.0 ipywidgets: 8.0.6 jedi: 0.18.2 Jinja2: 3.1.2 jupyter-client: 8.0.2 jupyter-core: 5.3.0 jupyterlab-widgets: 3.0.7 kiwisolver: 1.4.4 line-profiler: 4.0.2 lxml: 4.9.2 lz4: 4.3.2 MarkupSafe: 2.1.2 matplotlib: 3.6.3 matplotlib-inline: 0.1.6 msgpack: 1.0.4 nest-asyncio: 1.5.6 netCDF4: 1.6.2 networkx: 2.8.8 nibabel: 5.0.1 nptyping: 2.5.0 numexpr: 2.8.4 numpy: 1.23.5 openvr: 1.23.701 packaging: 21.3 ParmEd: 3.4.3 parso: 0.8.3 pep517: 0.13.0 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 9.3.0 pip: 23.0 pkginfo: 1.9.6 platformdirs: 3.5.0 prompt-toolkit: 3.0.38 psutil: 5.9.4 ptyprocess: 0.7.0 pure-eval: 0.2.2 pycollada: 0.7.2 pydicom: 2.3.0 Pygments: 2.14.0 pynrrd: 1.0.0 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 3.0.9 pyproject-hooks: 1.0.0 PyQt6-commercial: 6.4.2 PyQt6-Qt6: 6.4.3 PyQt6-sip: 13.4.1 PyQt6-WebEngine-commercial: 6.4.0 PyQt6-WebEngine-Qt6: 6.4.3 python-dateutil: 2.8.2 pytz: 2023.3 pyzmq: 25.0.2 qtconsole: 5.4.0 QtPy: 2.3.1 RandomWords: 0.4.0 requests: 2.28.2 scipy: 1.9.3 setuptools: 67.4.0 setuptools-scm: 7.0.5 sfftk-rw: 0.7.3 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.4.1 sphinx: 6.1.3 sphinx-autodoc-typehints: 1.22 sphinxcontrib-applehelp: 1.0.4 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.1 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 stack-data: 0.6.2 tables: 3.7.0 tcia-utils: 1.2.0 tifffile: 2022.10.10 tinyarray: 1.2.4 tomli: 2.0.1 tornado: 6.3.1 traitlets: 5.9.0 typing-extensions: 4.5.0 tzdata: 2023.3 urllib3: 1.26.15 wcwidth: 0.2.6 webcolors: 1.12 wheel: 0.38.4 wheel-filename: 1.4.1 widgetsnbextension: 4.0.7 zipp: 3.15.0
Change History (2)
comment:1 by , 3 months ago
Component: | Unassigned → Input/Output |
---|---|
Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → assigned |
Summary: | ChimeraX bug report submission → Saving movie: No space left on device |
comment:2 by , 3 months ago
Resolution: | → fixed |
---|---|
Status: | assigned → closed |
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I added an clearer error message without the traceback saying "Out of disk space saving movie frame image [path]" to help users more quickly realize what the problem is.