Opened 4 months ago
Closed 4 months ago
#18256 closed defect (fixed)
Saving movie: No space left on device
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Input/Output | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-15.4.1-arm64-arm-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
(Describe the actions that caused this problem to occur here)
Log:
Startup Messages
---
warnings | No presets found in custom preset folder
/Users/mphill65/Python_Scripts/chimera_prests/.git
Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with
that from NMRSTAR bundle
> alias rd ui mousemode right distance
> alias rs ui mousemode right select
> alias nmr1 hide #*.2-20 models
> alias slall label $1 text
> "{0.label_one_letter_code}{0.number}{0.insertion_code}"
> alias lmearo label $1:thr,met,ala,leu,val,ile,phe,tyr text
> "{0.label_one_letter_code}{0.number}{0.insertion_code}"
> alias showbb show $1@N,C,CA,O,H; cartoon $1 suppress false; transparency $1
> 50 target c; hide $1:hoh
> alias hidebb hide $1@N,C,CA,O,H target a; transparency $1 0 target c
> alias sdist ui tool show Distances
> alias showmet show $1:ile,leu,val,met,ala,thr target a; hide H; color $1:ile
> paleturquoise target a; color $1:leu lightsalmon target a; color $1:val
> khaki target a; color $1:met thistle target a; color $1:ala yellowgreen
> target ab; color $1:thr aquamarine target a;color byhetero target a
> alias showaro show $1:phe,tyr,his,trp target ab; hide H; color $1:phe plum
> target a; color $1:tyr lightpink target a; color byhetero target a
> alias csf cartoon $1 suppress false
> alias rota swapaa interactive $1 $2
> alias phi information residue $1 attribute phi
> alias psi information residue $1 attribute psi
> alias chi1 information residue $1 attribute chi1
> alias chi2 information residue $1 attribute chi2
> alias dd distance delete
> alias rd ui mousemode right distance
> alias rs ui mousemode right select
> alias nmr1 hide #*.2-20 models
> alias slall label sel text
> "{0.label_one_letter_code}{0.number}{0.insertion_code}"
> alias lmearo label $1:thr,met,ala,leu,val,ile,phe,tyr text
> "{0.label_one_letter_code}{0.number}{0.insertion_code}"
> alias showbb show $1@N,C,CA,O,H; cartoon $1 suppress false; transparency $1
> 50 target c; hide $1:hoh
> alias hidebb hide $1@N,C,CA,O,H target a; transparency $1 0 target c
> alias sdist ui tool show Distances
> alias showmet show $1:ile,leu,val,met,ala,thr target a; hide H; color $1:ile
> paleturquoise target a; color $1:leu lightsalmon target a; color $1:val
> khaki target a; color $1:met thistle target a; color $1:ala yellowgreen
> target ab; color $1:thr aquamarine target a;color byhetero target a
> alias showaro show $1:phe,tyr,his,trp target ab; hide H; color $1:phe plum
> target a; color $1:tyr lightpink target a; color byhetero target a
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open plusACP-Mg.cxc
> color name color0 rgb(254,217,118)
Color 'color0' is opaque: rgb(99.6%, 85.1%, 46.3%) hex: #fed976
> color name color1 rgb(254,178,76)
Color 'color1' is opaque: rgb(99.6%, 69.8%, 29.8%) hex: #feb24c
> color name color2 rgb(253,141,60)
Color 'color2' is opaque: rgb(99.2%, 55.3%, 23.5%) hex: #fd8d3c
> color name color3 rgb(252,78,42)
Color 'color3' is opaque: rgb(98.8%, 30.6%, 16.5%) hex: #fc4e2a
> color name color4 rgb(189,0,38)
Color 'color4' is opaque: rgb(74.1%, 0%, 14.9%) hex: #bd0026
> color name color5 rgb(150,0,0)
Color 'color5' is opaque: rgb(58.8%, 0%, 0%) hex: #960000
> key color0:0.00 color1:1.00 color2:2.00 color3:3.00 color4:4.00 color5:5.00
> fontSize 1 colorTreatment distinct numericLabelSpacing equal size
> 0.20000,0.03000 pos 0.75,0.03
> 2dlabels text "Δδ (¹³C ppm)" size 24 xpos 0.80 ypos 0.067
> open
> /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb
> maxModels 1
Summary of feedback from opening
/Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb
---
warnings | Ignored bad PDB record found on line 1
REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ignored bad PDB record found on line 2
REMARK PdbStat -- PDB COORDINATES FOR ALL_KK_CNS.PDB, 20 MODEL/S
ALL_KK_CNS.PDB
Ignored bad PDB record found on line 3
REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ignored bad PDB record found on line 41
REMARK ===============================================================
Ignored bad PDB record found on line 43
REMARK energies: -16069, 1401.86, 1612.22, 538.115, 2235.42
198 messages similar to the above omitted
Chain information for ERK3_MK5_cya15nu_ref_ens.pdb #3
---
Chain | Description
A | No description available
B | No description available
> hide #3 target a
> rename #3 plusACP-Mg_CS_CMe
> color #3 gray(150)
> show nucleic
> hide #3: protein|solvent|H target as
> surface hidePatches
> style (protein|nucleic|solvent) & @@draw_mode=0 stick
Changed 0 atom styles
> cartoon style modeHelix tube sides 20
> graphics silhouettes true
> cartoon style radius 1.5
> set bgColor white
> style :ala,leu,ile,val,met,thr ball
Changed 2861 atom styles
> color #3:48,175,263,279,296 color0 target a
> color #3:48,133,306 color1 target a
> color #3:77,194,285,310 color2 target a
> color #3:92 color3 target a
> color #3:111,217,218 color4 target a
> color #3:129 color black
> size stickRadius 0.27
Changed 7478 bond radii
> size atomRadius 2.7
Changed 7403 atom radii
> size :*@CA,CB,O*,N,C atomRadius 0.7
Changed 2528 atom radii
> size :ala@CB atomRadius 2.7
Changed 23 atom radii
> size :met@CG,SD atomRadius 0.7
Changed 26 atom radii
> size :leu,ile@CG* atomRadius 0.7
Changed 120 atom radii
> size :phe,try@CD*,CG*,CZ* atomRadius 0.7
Changed 56 atom radii
> show #3:48,175,263,279,296,48,133,306,77,194,285,310,92,111,217,218,129
> target a
> 2dlabels text 0.07 size 20 xpos 0.75 ypos 0.01
> 2dlabels text 0.09 size 20 xpos 0.785 ypos 0.01
> 2dlabels text 0.10 size 20 xpos 0.82 ypos 0.01
> 2dlabels text 0.11 size 20 xpos 0.855 ypos 0.01
> 2dlabels text 0.12 size 20 xpos 0.89 ypos 0.01
> 2dlabels text 0.13 size 20 xpos 0.925 ypos 0.01
> rename #2.2-7 id #2.1
> label #3:48,175,263,279,296,48,133,306,77,194,285,310,92,111,217,218,129
> text {0.label_one_letter_code}{0.number}
> 2dlabels text "Δδ (¹H ppm)" size 24 xpos 0.80 ypos 0.067
> open
> /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb
> maxModels 1
Summary of feedback from opening
/Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb
---
warnings | Ignored bad PDB record found on line 1
REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ignored bad PDB record found on line 2
REMARK PdbStat -- PDB COORDINATES FOR ALL_KK_CNS.PDB, 20 MODEL/S
ALL_KK_CNS.PDB
Ignored bad PDB record found on line 3
REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ignored bad PDB record found on line 41
REMARK ===============================================================
Ignored bad PDB record found on line 43
REMARK energies: -16069, 1401.86, 1612.22, 538.115, 2235.42
198 messages similar to the above omitted
Chain information for ERK3_MK5_cya15nu_ref_ens.pdb #4
---
Chain | Description
A | No description available
B | No description available
> hide #4 target a
> rename #4 plusACP-Mg_CS_HMe
> color #4 gray(150)
> show nucleic
> hide #3: protein|solvent|H target as
> surface hidePatches
> style (protein|nucleic|solvent) & @@draw_mode=0 stick
Changed 0 atom styles
> cartoon style modeHelix tube sides 20
> graphics silhouettes true
> cartoon style radius 1.5
> set bgColor white
> style :ala,leu,ile,val,met,thr ball
Changed 5722 atom styles
> color #4:62,68,77,99,162,169,212,213,217,221,227,296,307,316 color0 target a
> color
> #4:51,62,66,69,83,99,106,111,129,133,169,218,221,223,241,244,289,296,310,316,323
> color1 target a
> color #4:37,47,66,106,111,129,133,143,215,218,223,244,248,272,310,323 color2
> target a
> color #4:48,248,272 color3 target a
> color #4:271 color4 target a
> color #4:263 color5 target a
> size stickRadius 0.27
Changed 14956 bond radii
> size atomRadius 2.7
Changed 14806 atom radii
> size :*@CA,CB,O*,N,C atomRadius 0.7
Changed 5056 atom radii
> size :ala@CB atomRadius 2.7
Changed 46 atom radii
> size :met@CG,SD atomRadius 0.7
Changed 52 atom radii
> size :leu,ile@CG* atomRadius 0.7
Changed 240 atom radii
> size :phe,try@CD*,CG*,CZ* atomRadius 0.7
Changed 112 atom radii
> show
> #4:62,68,77,99,162,169,212,213,217,221,227,296,307,316,51,62,66,69,83,99,106,111,129,133,169,218,221,223,241,244,289,296,310,316,323,37,47,66,106,111,129,133,143,215,218,223,244,248,272,310,323,48,248,272,271,263
> target a
> 2dlabels text 0.01 size 20 xpos 0.75 ypos 0.01
> 2dlabels text 0.01 size 20 xpos 0.785 ypos 0.01
> 2dlabels text 0.01 size 20 xpos 0.82 ypos 0.01
> 2dlabels text 0.01 size 20 xpos 0.855 ypos 0.01
> 2dlabels text 0.02 size 20 xpos 0.89 ypos 0.01
> 2dlabels text 0.02 size 20 xpos 0.925 ypos 0.01
> rename #2.3-8 id #2.2
> label
> #4:62,68,77,99,162,169,212,213,217,221,227,296,307,316,51,62,66,69,83,99,106,111,129,133,169,218,221,223,241,244,289,296,310,316,323,37,47,66,106,111,129,133,143,215,218,223,244,248,272,310,323,48,248,272,271,263
> text {0.label_one_letter_code}{0.number}
> 2dlabels text "Δδₐᵥₑ (HC ppm)" size 24 xpos 0.79 ypos 0.067
> open
> /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb
> maxModels 1
Summary of feedback from opening
/Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb
---
warnings | Ignored bad PDB record found on line 1
REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ignored bad PDB record found on line 2
REMARK PdbStat -- PDB COORDINATES FOR ALL_KK_CNS.PDB, 20 MODEL/S
ALL_KK_CNS.PDB
Ignored bad PDB record found on line 3
REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ignored bad PDB record found on line 41
REMARK ===============================================================
Ignored bad PDB record found on line 43
REMARK energies: -16069, 1401.86, 1612.22, 538.115, 2235.42
198 messages similar to the above omitted
Chain information for ERK3_MK5_cya15nu_ref_ens.pdb #5
---
Chain | Description
A | No description available
B | No description available
> hide #5 target a
> rename #5 plusACP-Mg_CS_wavg_CMe
> color #5 gray(150)
> show nucleic
> hide #5: protein|solvent|H target as
> surface hidePatches
> style (protein|nucleic|solvent) & @@draw_mode=0 stick
Changed 0 atom styles
> cartoon style modeHelix tube sides 20
> graphics silhouettes true
> cartoon style radius 1.5
> set bgColor white
> style :ala,leu,ile,val,met,thr ball
Changed 8583 atom styles
> color
> #5:37,51,54,66,68,69,116,143,156,160,169,178,210,215,221,223,225,235,241,244,271,272,279,289,316,323
> color0 target a
> color #5:48,77,133,175,194,263,279,296,306 color1 target a
> color #5:77,92,217,218,285,310 color2 target a
> color #5:111 color3 target a
> color #5:129 color4 target a
> size stickRadius 0.27
Changed 22434 bond radii
> size atomRadius 2.7
Changed 22209 atom radii
> size :*@CA,CB,O*,N,C atomRadius 0.7
Changed 7584 atom radii
> size :ala@CB atomRadius 2.7
Changed 69 atom radii
> size :met@CG,SD atomRadius 0.7
Changed 78 atom radii
> size :leu,ile@CG* atomRadius 0.7
Changed 360 atom radii
> size :phe,try@CD*,CG*,CZ* atomRadius 0.7
Changed 168 atom radii
> show
> #5:37,51,54,66,68,69,116,143,156,160,169,178,210,215,221,223,225,235,241,244,271,272,279,289,316,323,48,77,133,175,194,263,279,296,306,77,92,217,218,285,310,111,129
> target a
> 2dlabels text 0.03 size 20 xpos 0.75 ypos 0.01
> 2dlabels text 0.04 size 20 xpos 0.785 ypos 0.01
> 2dlabels text 0.06 size 20 xpos 0.82 ypos 0.01
> 2dlabels text 0.07 size 20 xpos 0.855 ypos 0.01
> 2dlabels text 0.08 size 20 xpos 0.89 ypos 0.01
> 2dlabels text 0.10 size 20 xpos 0.925 ypos 0.01
> rename #2.4-9 id #2.3
> label
> #5:37,51,54,66,68,69,116,143,156,160,169,178,210,215,221,223,225,235,241,244,271,272,279,289,316,323,48,77,133,175,194,263,279,296,306,77,92,217,218,285,310,111,129
> text {0.label_one_letter_code}{0.number}
> 2dlabels text "1 – I ∕ I₀" size 24 xpos 0.82 ypos 0.066 margin 6
> open
> /Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb
> maxModels 1
Summary of feedback from opening
/Users/mphill65/Mapk6/Mapk6_9-341/20250716_ILVMATYF_pERK3-9-341_2mMACP-5mMmg_80uM_20C_1100/NODA/Round2/ERK3_MK5_cya15nu_ref_ens.pdb
---
warnings | Ignored bad PDB record found on line 1
REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ignored bad PDB record found on line 2
REMARK PdbStat -- PDB COORDINATES FOR ALL_KK_CNS.PDB, 20 MODEL/S
ALL_KK_CNS.PDB
Ignored bad PDB record found on line 3
REMARK PdbStat -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Ignored bad PDB record found on line 41
REMARK ===============================================================
Ignored bad PDB record found on line 43
REMARK energies: -16069, 1401.86, 1612.22, 538.115, 2235.42
198 messages similar to the above omitted
Chain information for ERK3_MK5_cya15nu_ref_ens.pdb #6
---
Chain | Description
A | No description available
B | No description available
> hide #6 target a
> rename #6 plusACP-Mg_Intensity_CMe
> color #6 gray(150)
> show nucleic
> hide #6: protein|solvent|H target as
> surface hidePatches
> style (protein|nucleic|solvent) & @@draw_mode=0 stick
Changed 0 atom styles
> cartoon style modeHelix tube sides 20
> graphics silhouettes true
> cartoon style radius 1.5
> set bgColor white
> style :ala,leu,ile,val,met,thr ball
Changed 11444 atom styles
> color
> #6:9,11,21,37,47,54,62,66,69,83,92,99,106,111,113,116,129,133,143,146,156,162,169,175,178,194,210,212,215,217,218,221,223,225,227,230,233,235,241,244,271,272,279,285,289,298,302,306,307,310,316,323
> color black
> size stickRadius 0.27
Changed 29912 bond radii
> size atomRadius 2.7
Changed 29612 atom radii
> size :*@CA,CB,O*,N,C atomRadius 0.7
Changed 10112 atom radii
> size :ala@CB atomRadius 2.7
Changed 92 atom radii
> size :met@CG,SD atomRadius 0.7
Changed 104 atom radii
> size :leu,ile@CG* atomRadius 0.7
Changed 480 atom radii
> size :phe,try@CD*,CG*,CZ* atomRadius 0.7
Changed 224 atom radii
> show
> #6:9,11,21,37,47,54,62,66,69,83,92,99,106,111,113,116,129,133,143,146,156,162,169,175,178,194,210,212,215,217,218,221,223,225,227,230,233,235,241,244,271,272,279,285,289,298,302,306,307,310,316,323
> target a
> 2dlabels text 13.53 size 20 xpos 0.75 ypos 0.01
> 2dlabels text 11.46 size 20 xpos 0.785 ypos 0.01
> 2dlabels text 9.39 size 20 xpos 0.82 ypos 0.01
> 2dlabels text 7.32 size 20 xpos 0.855 ypos 0.01
> 2dlabels text 5.24 size 20 xpos 0.89 ypos 0.01
> 2dlabels text 3.17 size 20 xpos 0.925 ypos 0.01
> rename #2.5-10 id #2.4
> label
> #6:9,11,21,37,47,54,62,66,69,83,92,99,106,111,113,116,129,133,143,146,156,162,169,175,178,194,210,212,215,217,218,221,223,225,227,230,233,235,241,244,271,272,279,285,289,298,302,306,307,310,316,323
> text {0.label_one_letter_code}{0.number}
> hide H
> lighting gentle
executed plusACP-Mg.cxc
> hide #!6 models
> hide #!4 models
> hide #!3 models
> hide #!2.4 models
> hide #!2.2 models
> hide #!2.1 models
> color #5:342-473 purple
> movie record
> turn y 2 180
> wait 180
Traceback (most recent call last):
File
"/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/triggerset.py", line 138, in invoke
return self._func(self._name, data)
File
"/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/movie/movie.py", line 172, in capture_image
i.save(save_path, self.img_fmt)
File
"/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/PIL/Image.py", line 2353, in save
save_handler(self, fp, filename)
File
"/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/PIL/PpmImagePlugin.py", line 324, in _save
ImageFile._save(im, fp, [("raw", (0, 0) + im.size, 0, (rawmode, 0, 1))])
File
"/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/PIL/ImageFile.py", line 505, in _save
_encode_tile(im, fp, tile, bufsize, fh)
File
"/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/PIL/ImageFile.py", line 532, in _encode_tile
s = encoder.encode_to_file(fh, bufsize)
OSError: [Errno 28] No space left on device
Error processing trigger "frame drawn":
OSError: [Errno 28] No space left on device
File
"/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/PIL/ImageFile.py", line 532, in _encode_tile
s = encoder.encode_to_file(fh, bufsize)
See log for complete Python traceback.
> movie encode /Users/mphill65/Desktop/movie2.mp4
Movie saved to /Users/mphill65/Desktop/movie2.mp4
OpenGL version: 4.1 Metal - 89.4
OpenGL renderer: Apple M2 Max
OpenGL vendor: Apple
Python: 3.9.11
Locale: en_US.UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: Mac Studio
Model Identifier: Mac14,13
Model Number: MQH73LL/A
Chip: Apple M2 Max
Total Number of Cores: 12 (8 performance and 4 efficiency)
Memory: 32 GB
System Firmware Version: 11881.121.1
OS Loader Version: 11881.101.1
Software:
System Software Overview:
System Version: macOS 15.4.1 (24E263)
Kernel Version: Darwin 24.4.0
Time since boot: 26 days, 6 hours, 23 minutes
Graphics/Displays:
Apple M2 Max:
Chipset Model: Apple M2 Max
Type: GPU
Bus: Built-In
Total Number of Cores: 30
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
DELL U3223QE:
Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition)
UI Looks like: 3840 x 2160 @ 60.00Hz
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
DELL U3223QE:
Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition)
UI Looks like: 3840 x 2160 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9.1
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.1
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.3
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.7
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.6.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.5.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4.1
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.1
traitlets: 5.9.0
typing-extensions: 4.5.0
tzdata: 2023.3
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 4 months ago
| Component: | Unassigned → Input/Output |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Saving movie: No space left on device |
comment:2 by , 4 months ago
| Resolution: | → fixed |
|---|---|
| Status: | assigned → closed |
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I added an clearer error message without the traceback saying "Out of disk space saving movie frame image [path]" to help users more quickly realize what the problem is.