Timeline



Dec 21, 2023:

6:41 PM 2023-12-21 edited by Tom Goddard
(diff)
6:25 PM NIAID2023 edited by Tom Goddard
(diff)
6:18 PM Ticket #10393 (Make measure volume / area warn if surface is clipped) created by Tom Goddard
The measure volume and area commands should probably warn if clip cap …
6:08 PM Ticket #10390 (Unzipping AlphaFold results: Permission denied) closed by Tom Goddard
can't reproduce
5:57 PM Ticket #10383 (CA-only PDB not chained) closed by pett
fixed: Hi Juan, Thanks for reporting this problem and providing a test case. …
5:14 PM Ticket #10388 (ChimeraX 1.7 won't start when initial window size setting is "maximized") closed by Tom Goddard
fixed
5:08 PM Ticket #10392 (Add a command to set the sequence for an atomic model chain) closed by pett
duplicate: No, I believe the idea is to copy sequence information from one chain …
4:05 PM Ticket #10392 (Add a command to set the sequence for an atomic model chain) created by matthias.vorlaender@…
Want a way to set the full sequence of chains in an atomic model, even …
4:05 PM Features edited by pett
(diff)
3:41 PM NIAID2023 edited by Elaine Meng
(diff)
3:38 PM NIAID2023 edited by Elaine Meng
(diff)
2:13 PM NIAID2023 edited by Elaine Meng
(diff)
2:10 PM NIAID2023 edited by Elaine Meng
(diff)
2:09 PM NIAID2023 edited by Elaine Meng
(diff)
1:46 PM NIAID2023 edited by Elaine Meng
(diff)
1:01 PM Ticket #10385 (Save mmCIF computedSheets true: No module named 'pprintpp') closed by Greg Couch
fixed: Ack. All of the lines with "# DEBUG" should be have been removed …
10:47 AM Ticket #10391 (Session restore: KeyError deleting tasks) created by jekabson@…
[…]
10:11 AM Ticket #10390 (Unzipping AlphaFold results: Permission denied) created by chimerax-bug-report@…
[…]
9:37 AM phenix-12-14-23 edited by pett
(diff)
6:24 AM Ticket #10389 (wrapped C/C++ object of type DICOMTable has been deleted) created by chimerax-bug-report@…
[…]
6:12 AM Ticket #10388 (ChimeraX 1.7 won't start when initial window size setting is "maximized") created by matt.jaremko@…
[…]
5:59 AM Ticket #10387 (Crash in garbage collection saving session) created by ogahura@…
[…]
5:57 AM Ticket #10386 (Save mmCIF computerSheets true: Bad sheet data) created by Tristan Croll
[…]
5:40 AM Ticket #10385 (Save mmCIF computedSheets true: No module named 'pprintpp') created by Tristan Croll
[…]
12:59 AM Ticket #10384 (vop unroll: cannot select an axis to squeeze out which has size not ...) created by karin.mazmanian@…
[…]

Dec 20, 2023:

11:16 PM Ticket #10383 (CA-only PDB not chained) created by eugenejyuan@…
[…] [[Image(...)]] […] …
3:57 PM Ticket #10382 (Crash at exit) closed by pett
can't reproduce: Hi Amit, Thanks for reporting this problem. I would recommend …
1:33 PM Ticket #10379 (MemoryError opening mmCIF files) closed by pett
duplicate
12:07 PM Ticket #10377 (Color command syntax) closed by Tom Goddard
can't reproduce: You say "The cartoon turns into blue instead of red." Apparently you …
11:17 AM Ticket #10376 (Crash using File→Open on Windows and/or in return statement) closed by pett
can't reproduce
11:15 AM Ticket #10375 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
10:04 AM Ticket #10382 (Crash at exit) created by agautam@…
[…]
4:19 AM Ticket #10381 (Session files get larger on each save) created by drorn@…
[…]
1:53 AM Ticket #10380 (QWebEngine crash) created by drorn@…
[…]
12:25 AM Ticket #10379 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]

Dec 19, 2023:

10:00 PM Ticket #10378 (PyRx PDBQT file: list index out of range) created by radu.tamaian@…
[…]
8:08 PM Ticket #10377 (Color command syntax) created by Prashant.k.singh@…
[…]
5:53 PM Ticket #10376 (Crash using File→Open on Windows and/or in return statement) created by chimerax-bug-report@…
[…]
4:06 PM Ticket #10375 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]
2:53 PM Ticket #10022 (RFE: coulombic option to force charge recalculation) closed by pett
fixed: Okay, in tomorrow's build the coulombic command will accept a …
1:45 PM Ticket #10366 (Realsense: RuntimeError: Couldn't resolve requests) closed by Tom Goddard
can't reproduce: My guess is they have a different Intel RealSense camera such as the …
1:24 PM Ticket #10373 (read_json_pae_matrix: KeyError: 0) closed by Tom Goddard
duplicate: This bug is because you are using an old ChimeraX version 1.4 …
1:24 PM Ticket #10372 (read_json_pae_matrix: KeyError: 0) closed by Tom Goddard
duplicate: This bug is because you are using an old ChimeraX version 1.4 …
1:06 PM Dev2024-1-8 created by Tom Goddard
1:06 PM 2023-12-21 created by Tom Goddard
1:05 PM DeveloperMeetings edited by Tom Goddard
(diff)
10:46 AM Ticket #10374 (Histogram widget: operands could not be broadcast together with shapes) closed by pett
duplicate
10:46 AM ChangeLog edited by Greg Couch
(diff)
10:42 AM Ticket #10374 (Histogram widget: operands could not be broadcast together with shapes) created by chimerax-bug-report@…
[…]
10:34 AM Ticket #10373 (read_json_pae_matrix: KeyError: 0) created by nandita.bodra@…
[…] ALPHAFOLD BINDING PREDICTION RESULT .cxs
9:27 AM Ticket #10371 (Crash in garbage collection) closed by pett
can't reproduce
9:22 AM Ticket #10370 (ISOLDE: wrapped C/C++ object of type QTableWidget has been deleted) closed by pett
duplicate: Old versions of ChimeraX and ISOLDE
9:20 AM Ticket #10369 (Crash using File→Open on Windows and/or in return statement) closed by pett
can't reproduce: 1.3
9:16 AM Ticket #10367 (Realsense: RuntimeError: Couldn't resolve requests) closed by pett
duplicate
9:08 AM Ticket #10364 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by pett
can't reproduce: Looks like remote display
7:45 AM Ticket #10372 (read_json_pae_matrix: KeyError: 0) created by nandita.bodra@…
[…]
6:38 AM Ticket #10371 (Crash in garbage collection) created by chimerax-bug-report@…
[…]
6:35 AM Ticket #10370 (ISOLDE: wrapped C/C++ object of type QTableWidget has been deleted) created by chimerax-bug-report@…
[…]
5:59 AM Ticket #10369 (Crash using File→Open on Windows and/or in return statement) created by chimerax-bug-report@…
[…]
2:08 AM Ticket #10368 (CREST search: could not convert string to float: 'atoms') created by jackson@…
[…]
1:43 AM Ticket #10367 (Realsense: RuntimeError: Couldn't resolve requests) created by chimerax-bug-report@…
[…]
1:31 AM Ticket #10366 (Realsense: RuntimeError: Couldn't resolve requests) created by chimerax-bug-report@…
[…]

Dec 18, 2023:

11:27 PM Ticket #10365 (Warnings at startup: Corrupt JPEG data: 3 extraneous bytes before ...) created by goddard@…
[…]
6:13 PM Ticket #10364 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by chimerax-bug-report@…
[…]
4:53 PM Dev2023-12-18 edited by Tom Goddard
(diff)
4:34 PM Ticket #10349 (Segger: fmap.data is None) closed by Tom Goddard
duplicate: Fixed in ChimeraX 1.7 daily builds and release candidate, July 25, …
4:20 PM Ticket #10362 (Mouse modes goes bananas) closed by Tom Goddard
fixed: Fixed the stuck mouse mode in ChimeraX 1.8 daily builds, not in 1.7. …
12:04 PM Ticket #10359 (Save GLB: Cannot handle this data type: (1, 1, 1), |u1) closed by Tom Goddard
fixed: Fixed probably about 3 months ago when GLTF texture handling improved. …
11:47 AM Ticket #10358 (read_json_pae_matrix: KeyError: 0) closed by Tom Goddard
fixed: This ChimeraX error parsing AlphaFold PAE results is from using an old …
11:44 AM Ticket #10361 (Crash handling text input) closed by pett
can't reproduce
11:27 AM Ticket #10363 ('build peptide' convenience options) created by Elaine Meng
Would sometimes be convenient if 'build peptide' allowed just saying …
11:24 AM Ticket #10355 (ArtiaX:boolean index did not match indexed array along dimension 0) closed by pett
duplicate
11:24 AM Ticket #10351 (Graphics crash, macOS 14.1.1, Intel Iris Plus Graphics 655) closed by Tom Goddard
nonchimerax: Apple Intel graphics driver crash.
11:15 AM Ticket #10353 (Crash updating item menu/list) closed by pett
can't reproduce: Seems unlikely to be the line in the traceback, which is just: …
11:05 AM Ticket #10350 (Crash showing menu) closed by pett
can't reproduce
10:59 AM Ticket #10348 (Crash emitting color_pause signal) closed by pett
duplicate: Duplicate of #8783
10:49 AM Ticket #10347 (Crash in Qt/graphics driver at startup) closed by pett
can't reproduce: Hi Sanjay, Thanks for reporting this problem. It looks like a bug …
8:57 AM Ticket #10362 (Mouse modes goes bananas) created by Tristan Croll
[…]
5:41 AM Ticket #10361 (Crash handling text input) created by chimerax-bug-report@…
[…]
4:22 AM Ticket #10360 (chimeraX download for automated autopkg runs) created by andrei.labin@…
[…] smime.p7s

Dec 17, 2023:

1:28 PM Ticket #10359 (Save GLB: Cannot handle this data type: (1, 1, 1), |u1) created by chimerax-bug-report@…
[…]
9:54 AM Ticket #10358 (read_json_pae_matrix: KeyError: 0) created by nandita.bodra@…
[…]

Dec 16, 2023:

3:23 PM Ticket #10357 (Phenix water placement: name 'args' is not defined) created by semchonok@…
[…]
10:57 AM Ticket #10356 (DICOM: bits_allocated is None) created by kilmarnock@…
[…]
3:09 AM Ticket #10355 (ArtiaX:boolean index did not match indexed array along dimension 0) created by chimerax-bug-report@…
[…]
3:09 AM Ticket #10354 (ArtiaX:boolean index did not match indexed array along dimension 0) created by chimerax-bug-report@…
[…]
12:09 AM Ticket #10353 (Crash updating item menu/list) created by chimerax-bug-report@…
[…]

Dec 15, 2023:

4:49 PM Ticket #10352 (openvr.error_code.CompositorError_TextureUsesUnsupportedFormat) created by shaker.krit@…
[…]
5:18 AM Ticket #10351 (Graphics crash, macOS 14.1.1, Intel Iris Plus Graphics 655) created by chimerax-bug-report@…
[…]

Dec 14, 2023:

9:43 PM Ticket #10350 (Crash showing menu) created by chimerax-bug-report@…
[…]
7:49 PM Ticket #10349 (Segger: fmap.data is None) created by rslack@…
[…]
6:12 PM apple-dev edited by pett
(diff)
4:02 PM Ticket #10327 (Missing parts of Mac/Windows programming documentation) closed by Zach Pearson
fixed: Upgraded the script to use bash 3 features; docs should work in both …
3:54 PM Ticket #10348 (Crash emitting color_pause signal) created by chimerax-bug-report@…
[…]
3:23 PM Ticket #10343 (Button panel: wrapped C/C++ object of type QGridLayout has been deleted) closed by Tom Goddard
fixed: Fixed in daily build, not in 1.7 (too close to release). A button …
2:57 PM 2023-12-14 edited by Tom Goddard
(diff)
1:33 PM Ticket #10346 (Opening mmCIF file: MemoryError: not enough memory) closed by Tom Goddard
duplicate: After failing to open PDB 8d33 also failed making map copy. Had 1.5 …
1:27 PM Ticket #10337 (Flatpak movie generation fails) closed by Greg Couch
fixed: Fixed. Missed copying the needed patch from the development branch to …
12:47 PM Ticket #10347 (Crash in Qt/graphics driver at startup) created by sanjay.dey@…
[…]
12:02 PM Ticket #10342 (ArtiaX/pandas vs. numpy) closed by Greg Couch
limitation: User must have installed incompatible numpy. Unfortunately, pip will …
10:23 AM Ticket #10345 (Graphics driver and/or remote display crash) closed by pett
nonchimerax
10:14 AM Ticket #10344 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by pett
nonchimerax: Seems like they need to install a graphics driver; the renderer is "Mesa"
7:41 AM Ticket #10346 (Opening mmCIF file: MemoryError: not enough memory) created by chimerax-bug-report@…
[…]
12:59 AM Ticket #10345 (Graphics driver and/or remote display crash) created by chimerax-bug-report@…
[…]

Dec 13, 2023:

11:40 PM Ticket #10344 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by chimerax-bug-report@…
[…]
9:02 PM Ticket #10343 (Button panel: wrapped C/C++ object of type QGridLayout has been deleted) created by steffen@…
[…]
6:07 PM phenix-12-14-23 edited by pett
(diff)
5:22 PM phenix-12-14-23 edited by pett
(diff)
5:20 PM phenix-12-14-23 edited by pett
(diff)
5:17 PM phenix-12-14-23 edited by pett
(diff)
4:11 PM Ticket #10342 (ArtiaX/pandas vs. numpy) created by chimerax-bug-report@…
[…]
1:15 PM Ticket #10341 (Segmentations saved in sessions can't be edited) created by Zach Pearson
DICOM Grids have a reference_data field that isn't saved and restored …
1:13 PM Ticket #10196 (Segmentations saved in sessions don't get added to seg tool menu) closed by Zach Pearson
fixed: This is now fixed.
1:13 PM Ticket #9321 (DICOM: restore_snapshot for {Volume,VolumeImage} returned None) closed by Zach Pearson
fixed: I've changed the way DICOMs get restored to follow ChimeraX's convention.
11:54 AM phenix-12-14-23 edited by pett
(diff)
11:51 AM phenix-12-14-23 created by pett
11:50 AM Features edited by pett
(diff)
11:34 AM Ticket #10340 (No space left on device saving command history) closed by pett
nonchimerax
11:27 AM Ticket #10340 (No space left on device saving command history) created by chimerax-bug-report@…
[…]
11:22 AM Ticket #10339 (Crash in garbage collection while parsing matchmaker command atomspec ...) closed by pett
can't reproduce: Hi Mark, Thanks for reporting this problem. Unfortunately …
7:18 AM Ticket #10339 (Crash in garbage collection while parsing matchmaker command atomspec ...) created by maf95@…
[…]
1:31 AM Ticket #10338 (MemoryError saving session) created by Praffuls@…
[…]

Dec 12, 2023:

10:16 PM Ticket #10337 (Flatpak movie generation fails) created by david.chalmers@…
[…]
5:10 PM Ticket #10336 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
5:08 PM Ticket #10335 (Crash at exit) closed by pett
can't reproduce: Hi Vijay, Thanks for reporting this problem. It's not clear exactly …
5:01 PM Ticket #10334 (ISOLDE: crash in start_sim) closed by pett
can't reproduce: Version 1.3 and no reporter…
4:59 PM Ticket #10333 (Error launching CUDA compiler) closed by pett
can't reproduce: Version 1.3 and no reporter…
4:57 PM Ticket #10332 (Unable to restore objects of NewerVersionQuery class) closed by pett
duplicate
4:55 PM Ticket #10331 (Crash setting volume level) closed by pett
can't reproduce
4:53 PM Ticket #10330 (Crash in graphics masked_edges() computing mesh while setting volume level) closed by pett
can't reproduce
4:51 PM Ticket #10329 (Crash in event loop) closed by pett
can't reproduce
3:38 PM Ticket #10336 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]
3:04 PM Ticket #10335 (Crash at exit) created by vsreddy@…
[…]
1:58 PM Ticket #10334 (ISOLDE: crash in start_sim) created by chimerax-bug-report@…
[…]
1:45 PM Ticket #10333 (Error launching CUDA compiler) created by chimerax-bug-report@…
[…]
1:35 PM Ticket #10332 (Unable to restore objects of NewerVersionQuery class) created by chimerax-bug-report@…
[…]
1:35 PM Ticket #10326 (Graphics hardware encountered an error and was reset) closed by Tom Goddard
nonchimerax: ChimeraX crashed in Apple's Intel graphics driver. Unfortunately …
1:33 PM Ticket #10331 (Crash setting volume level) created by chimerax-bug-report@…
[…]
1:30 PM Ticket #10325 (Graphics crash, macOS 14.1.1, Intel Iris Plus Graphics) closed by Tom Goddard
nonchimerax: Apple Intel graphics driver crash.
1:26 PM Dev2023-12-18 created by Tom Goddard
1:24 PM 2023-12-14 created by Tom Goddard
1:23 PM 2023-12-7 edited by Tom Goddard
(diff)
1:19 PM DeveloperMeetings edited by Tom Goddard
(diff)
1:13 PM Ticket #10330 (Crash in graphics masked_edges() computing mesh while setting volume level) created by chimerax-bug-report@…
[…]
12:59 PM Ticket #10329 (Crash in event loop) created by chimerax-bug-report@…
[…]
9:40 AM Ticket #10328 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
9:34 AM Ticket #10324 (Unable to restore objects of NewerVersionQuery class) closed by pett
duplicate: Hi Dawid, Thanks for reporting this problem. It has been fixed in the …
9:29 AM Ticket #10322 (MemoryError opening mmCIF files) closed by pett
duplicate
5:11 AM Ticket #10328 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]

Dec 11, 2023:

6:42 PM Ticket #10327 (Missing parts of Mac/Windows programming documentation) created by pett
Comparing the builtin non-Linux documentation for Python modules …
5:52 PM Ticket #10326 (Graphics hardware encountered an error and was reset) created by nkkhandelwal@…
[…]
4:22 PM Dev2023-12-11 edited by Tom Goddard
(diff)
4:22 PM Dev2023-12-11 edited by Tom Goddard
(diff)
4:04 PM Ticket #10325 (Graphics crash, macOS 14.1.1, Intel Iris Plus Graphics) created by chimerax-bug-report@…
[…]
3:45 PM Ticket #10324 (Unable to restore objects of NewerVersionQuery class) created by dzyla@…
[…]
3:20 PM Ticket #10321 (Fit search results list may show wrong results for subsequent searches.) closed by Tom Goddard
not a bug: This bug is not actually a bug. It was real variability in the …
3:17 PM Ticket #10323 (fitmap search animation moving models does not take a direct route) closed by Tom Goddard
fixed: Fixed in 1.8 daily and 1.7. The interpolation code was using a center …
3:14 PM Ticket #10323 (fitmap search animation moving models does not take a direct route) created by goddard@…
[…]
2:40 PM Ticket #9608 (Registration mailing-list subscription: HTTP 404 failure) reopened by pett
When I register my cgl email, it says: "Your copy of Chimera is …
2:28 PM Ticket #10218 (ffmpeg failure) closed by Greg Couch
fixed: Had to compile ffmpeg from source to get a version that would encode …
2:22 PM Ticket #9608 (Registration mailing-list subscription: HTTP 404 failure) closed by Greg Couch
fixed: Fixed by adding a cgi script that mimics the current API on …
2:00 PM Ticket #10322 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]
1:29 PM Ticket #10321 (Fit search results list may show wrong results for subsequent searches.) created by goddard@…
[…]
1:19 PM Ticket #10320 (MemoryError opening mmCIF files) closed by pett
duplicate
1:01 PM Ticket #10320 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]
12:53 PM Ticket #10319 (Make move to center mouse mode keep pivot at center after translation) created by leeyang+chimerax@…
Yang wants the center of rotation to stay at the middle of the …
12:42 PM Ticket #10318 (AlphaFold: 'AtomicStructure' object has no attribute ...) closed by Tom Goddard
limitation: The user ran an AlphaFold prediction of a single chain #1/A, but the …
11:03 AM Ticket #10317 (MemoryError opening mmCIF files) closed by pett
duplicate
11:02 AM Ticket #10317 (MemoryError opening mmCIF files) reopened by pett
11:02 AM Ticket #10317 (MemoryError opening mmCIF files) closed by pett
can't reproduce
10:55 AM Ticket #10310 (Graphics crash, Linux 6.2.0, Mesa 230.0.4, showing volume at step 1) closed by Tom Goddard
nonchimerax: Linux Mesa graphics driver crash.
10:51 AM Ticket #10315 (MemoryError opening mmCIF files) closed by pett
duplicate
10:11 AM Ticket #10314 (MemoryError opening mmCIF files) closed by pett
duplicate
10:10 AM Ticket #10313 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
10:08 AM Ticket #10312 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
10:07 AM Ticket #10311 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate: Hi AJ, Thanks for reporting this problem. This is a bug in the Qt …
10:03 AM Ticket #10309 (Crash in garbage collection) closed by pett
can't reproduce
10:01 AM Ticket #10308 (Dock Prep: bad hydrogen) closed by pett
not a bug
9:57 AM Ticket #10307 (MemoryError opening mmCIF files) closed by pett
duplicate: Hi Hongmin, Thanks for reporting this problem. It is fixed in the 1.7 …
9:54 AM Ticket #10306 (FindHBond: accPhiPsi() takes exactly N arguments) closed by pett
not a bug
9:52 AM Ticket #10305 (KeyError matching selected regions) closed by pett
duplicate
6:46 AM Ticket #10318 (AlphaFold: 'AtomicStructure' object has no attribute ...) created by chimerax-bug-report@…
[…]

Dec 10, 2023:

7:35 PM Ticket #10317 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]
5:18 PM Ticket #10316 ('clear log' missing from session restore options) created by ruchi.sharma@…
[…]
12:55 PM Ticket #10315 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]
11:50 AM NIAID2023 edited by Scooter Morris
(diff)

Dec 9, 2023:

11:08 AM Ticket #10314 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]
6:45 AM Ticket #10313 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]

Dec 8, 2023:

4:20 PM Ticket #10312 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]
1:07 PM Ticket #10311 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by abrahamjmorton@…
[…]
10:04 AM Ticket #10310 (Graphics crash, Linux 6.2.0, Mesa 230.0.4, showing volume at step 1) created by chimerax-bug-report@…
[…]
4:16 AM Ticket #10309 (Crash in garbage collection) created by chimerax-bug-report@…
[…]

Dec 7, 2023:

8:05 PM Ticket #10308 (Dock Prep: bad hydrogen) created by chimerax-bug-report@…
[…]
7:59 PM Ticket #10307 (MemoryError opening mmCIF files) created by caihongmin@…
[…]
6:51 PM Ticket #10306 (FindHBond: accPhiPsi() takes exactly N arguments) created by chimerax-bug-report@…
[…]
5:09 PM Ticket #10305 (KeyError matching selected regions) created by chimerax-bug-report@…
[…]
2:46 PM Ticket #10304 (Crash after computing/showing surface) closed by pett
can't reproduce
2:43 PM Ticket #10303 (Unable to restore objects of NewerVersionQuery class) closed by pett
duplicate
2:39 PM Ticket #10300 (Crash adding Volume menu) closed by pett
can't reproduce: The exception info says "VM - Fault hit memory shortage" and memory …
2:01 PM Ticket #10304 (Crash after computing/showing surface) created by chimerax-bug-report@…
[…]
1:14 PM Ticket #10303 (Unable to restore objects of NewerVersionQuery class) created by gage.leighton@…
[…]
12:58 PM Ticket #10299 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
12:56 PM Ticket #10298 (Crash in event loop) closed by pett
can't reproduce
12:32 PM Ticket #10302 (Snapshot toolbar button: Permission denied reading directory ...) closed by Tom Goddard
nonchimerax: This seems like a macOS bug. It may only happen when you switch …
12:29 PM Ticket #10301 (Permission denied reading directory "/Users/goddard/Desktop") closed by Tom Goddard
duplicate
12:20 PM Ticket #10302 (Snapshot toolbar button: Permission denied reading directory ...) created by goddard@…
[…]
12:18 PM Ticket #10301 (Permission denied reading directory "/Users/goddard/Desktop") created by goddard@…
[…]
5:51 AM Ticket #10300 (Crash adding Volume menu) created by chimerax-bug-report@…
[…]
5:27 AM Ticket #10299 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]

Dec 6, 2023:

10:20 PM Ticket #10298 (Crash in event loop) created by chimerax-bug-report@…
[…]
5:10 PM Ticket #10244 ("Direct" modeling doesn't handle target deletion relative to template) closed by pett
fixed: Fix in next daily build. Fix: …
12:51 PM Ticket #10293 (Default color targeting issue) closed by Tom Goddard
wontfix: That would be nice. But ChimeraX commands that take an atom specifier …
12:28 PM Ticket #10290 (Problems regarding Caver radius recipe) closed by Tom Goddard
not a bug: The instructions on the "Show Caver results" web page say: …
12:13 PM Ticket #10297 (Elaborate "Include maps" option in session save dialog) closed by Tom Goddard
fixed: Done. In 1.8 daily build and 1.7. Save dialog option now reads "Copy …
12:10 PM Ticket #10297 (Elaborate "Include maps" option in session save dialog) created by goddard@…
[…]
11:12 AM Ticket #10296 (Unable to restore objects of NewerVersionQuery class) closed by pett
duplicate
11:11 AM Ticket #10295 (Unable to restore objects of NewerVersionQuery class) closed by pett
duplicate: Hi Helen, Thanks for reporting this problem. It has been fixed in …
10:46 AM Ticket #10296 (Unable to restore objects of NewerVersionQuery class) created by helen.duyvesteyn@…
[…]
10:46 AM Ticket #10295 (Unable to restore objects of NewerVersionQuery class) created by helen.duyvesteyn@…
[…]
10:05 AM Ticket #10294 (coordset slider doesn't have changed number of coord sets) created by pett
The coordinate set slider doesn't handle a change in the number of …
6:19 AM Ticket #10293 (Default color targeting issue) created by Tristan Croll
[…]
12:05 AM Ticket #10292 (ArtiaX: wrapped C/C++ object of type QComboBox has been deleted) created by chimerax-bug-report@…
[…]

Dec 5, 2023:

11:49 PM Ticket #10291 (pkg_resources is deprecated) created by Greg Couch
See https://setuptools.pypa.io/en/latest/pkg_resources.html. …
9:56 PM Ticket #10290 (Problems regarding Caver radius recipe) created by alberto.segovia@…
[…]
12:38 PM Ticket #10286 (Crash while adjusting volume level?) closed by Tom Goddard
can't reproduce: ChimeraX appears to have crashed in the Qt window toolkit deleting an …
12:24 PM Ticket #10284 (Color surface: object of type 'NoneType' has no len()) closed by Tom Goddard
can't reproduce: The error is because you have a molecular surface that has no …
12:14 PM Dev2023-12-11 created by Tom Goddard
12:13 PM 2023-12-7 created by Tom Goddard
12:11 PM DeveloperMeetings edited by Tom Goddard
(diff)
11:45 AM Ticket #10289 (Qt fatal error: Failed to initialize graphics backend for OpenGL.) closed by pett
can't reproduce: Looks like remote display
11:40 AM Ticket #10289 (Qt fatal error: Failed to initialize graphics backend for OpenGL.) created by chimerax-bug-report@…
[…]
11:32 AM Ticket #8238 (User-installed bundles interfering with build) reopened by Zach Pearson
11:18 AM Ticket #10279 (StarMap: embedded null character in Rosetta input) closed by pett
can't reproduce: Hi Wolfgang, Unfortunately the reporter email address is …
11:05 AM Ticket #10287 (MemoryError opening mmCIF files) closed by pett
duplicate
10:56 AM Ticket #10283 (Crash while drag-selecting residues in sequence viewer) closed by pett
can't reproduce
10:02 AM Ticket #10288 (Crash in event loop) created by antonio.florencio@…
[…]
7:01 AM Ticket #10287 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]
6:52 AM Ticket #10286 (Crash while adjusting volume level?) created by scheffer@…
[…]
5:59 AM Ticket #10285 (SEQCROW: open ORCA output: could not convert string to float: 'Starting') created by andreapellegrini6698@…
[…]
3:35 AM Ticket #10284 (Color surface: object of type 'NoneType' has no len()) created by f.bruno@…
[…]

Dec 4, 2023:

5:07 PM Ticket #10283 (Crash while drag-selecting residues in sequence viewer) created by chimerax-bug-report@…
[…]
4:50 PM Ticket #8238 (User-installed bundles interfering with build) closed by Zach Pearson
fixed: Committed the fix today.
4:28 PM Dev2023-12-4 edited by Tom Goddard
(diff)
3:31 PM Ticket #10119 (atom_site.label_asym_id not allowing '.') closed by Greg Couch
fixed: Please reopen this ticket if you have any problems.
3:30 PM Ticket #9512 (Unable to open .cxs files saved in v1.6.1.) closed by Greg Couch
fixed: Please reopen if you have any problems.
2:18 PM Ticket #9525 (DICOM Segmentations: hard to resize cursor using touchpad Shift-scroll) closed by Zach Pearson
fixed
2:03 PM Ticket #9960 (ChargeError during dockprep) closed by pett
fixed: Fix: …
1:50 PM Dev2023-12-4 edited by Tom Goddard
(diff)
1:40 PM Ticket #10282 (Surface transparency not preserved when playing trajectory) created by goddard@…
[…]
1:29 PM Ticket #10114 (Unknown task state) closed by Zach Pearson
fixed: Added that state to the enum in core/src/tasks.
1:26 PM Ticket #10204 (Segmentations tool divide-by-zero when open DICOM only has SEG (no CT ...) closed by Zach Pearson
fixed: I've made the plane viewers do something sensible when there's no …
12:38 PM Ticket #10281 (Output colors in OBJ format using a .mtl file) created by zberndsen@…
From: "Berndsen, Zachary via ChimeraX-users" …
10:52 AM Ticket #10276 (MemoryError saving map in session) closed by Tom Goddard
nonchimerax
10:24 AM Ticket #10278 (MemoryError opening mmCIF files) closed by pett
duplicate
10:23 AM Ticket #10277 (SyntaxError in volume.py) closed by pett
duplicate: Hi Jayda, At the time you downloaded it, the release had a …
10:18 AM Ticket #10280 (UnicodeDecodeError reading PDB file) created by sk0815142@…
[…]

Dec 3, 2023:

12:06 PM Ticket #10279 (StarMap: embedded null character in Rosetta input) created by chimerax-bug-report@…
[…]
3:10 AM Ticket #10278 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]

Dec 1, 2023:

7:34 PM Ticket #10277 (SyntaxError in volume.py) created by jjhammock42@…
[…]
6:48 PM Ticket #9214 (ChimeraX 1.6.1 can not save as mmcif format while computedSheets is true) closed by pett
fixed: The sheet-computation code was doing all the right things when merging …
12:47 PM Ticket #10276 (MemoryError saving map in session) created by chimerax-bug-report@…
[…]
9:50 AM Ticket #10275 (Syntax error in volume.py) closed by pett
fixed: Hi Zahra, There was an error (typo) in the release candidate …
9:45 AM Ticket #10274 (Crash reading PDB file) closed by pett
can't reproduce
9:43 AM Ticket #10273 (Crash in garbage collection) closed by pett
can't reproduce
9:38 AM Ticket #10272 (Bad atom pointer?) closed by pett
can't reproduce: Version 1.5 -- maybe it will have "fixed itself" by now…
9:31 AM Ticket #10271 (mcopy command missing) closed by pett
not a bug: Hi Krishna, You must have found the mcopy documentation by searching …
9:22 AM Ticket #10269 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
9:12 AM Ticket #10275 (Syntax error in volume.py) created by zahra.mashhadi@…
[…]
4:46 AM Ticket #10274 (Crash reading PDB file) created by chimerax-bug-report@…
[…]
3:20 AM Ticket #10273 (Crash in garbage collection) created by chimerax-bug-report@…
[…]
2:59 AM Ticket #10272 (Bad atom pointer?) created by chimerax-bug-report@…
[…]
2:53 AM Ticket #10271 (mcopy command missing) created by kdr2001@…
[…]

Nov 30, 2023:

5:48 PM Ticket #10147 (Initial window placement offscreen) closed by pett
fixed: Committed a fix to the daily build (only): …
5:46 PM 2023-11-30 edited by Tom Goddard
(diff)
4:32 PM Ticket #10270 (need way to set full sequence of a chain) created by Greg Couch
It would be useful to be able to set the correct sequence to use for a …
3:39 PM Ticket #10268 (Movie recording not stopping) closed by Tom Goddard
duplicate: Duplicate of #10265.
2:58 PM Ticket #10269 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]
2:56 PM Dev2023-11-27 edited by pett
(diff)
2:39 PM Ticket #10267 (SyntaxError in volume.py) closed by pett
duplicate
2:38 PM Ticket #10268 (Movie recording not stopping) created by rgong@…
[…] movie_2.mp4
2:37 PM Ticket #10267 (SyntaxError in volume.py) created by chimerax-bug-report@…
[…]
2:02 PM Ticket #9994 (ChimeraX hangs saving a session, macOS Sonoma) closed by Tom Goddard
nonchimerax: Seems it was a non-responsive file system causing the file browser not …
1:59 PM Ticket #10079 (Colors of exported GLTF models don't match ChimeraX colors) closed by Tom Goddard
fixed: Fixed. Wrote colors in linear color space and read as linear color …
1:56 PM Ticket #10198 (Need a volume viewer opened trigger) closed by Tom Goddard
fixed: Seems the chimerax.core.tools.ADD_TOOL_INSTANCE trigger does what you need.
1:52 PM Ticket #10250 (HtmlView temp file name: Invalid argument) closed by Tom Goddard
can't reproduce: Get Invalid argument in Python open() for the path on Windows. This …
1:38 PM Ticket #10265 (Movie record records too many frames) closed by Tom Goddard
not a bug: Are you putting your movie recording commands in a script (.cxc) file? …
1:28 PM Ticket #10266 (SyntaxError in volume.py) closed by Tom Goddard
duplicate: Duplicate.
1:18 PM Ticket #10264 (SyntaxError in volume.py) closed by Tom Goddard
duplicate: Fixed. A new release candidate build date November 30 will be on the …
1:18 PM Ticket #10263 (SyntaxError in volume.py) closed by Tom Goddard
duplicate: Duplicate of #10262.
1:17 PM Ticket #10262 (SyntaxError in volume.py) closed by Tom Goddard
duplicate: Fixed. A new release candidate build date November 30 will be on the …
1:16 PM Ticket #10259 (SyntaxError in volume.py) closed by Tom Goddard
duplicate: Fixed. A new release candidate build date November 30 will be on the …
1:15 PM Ticket #10258 (SyntaxError in volume.py) closed by Tom Goddard
fixed: Fixed and release candidate build restarted to minimize the reporting …
1:11 PM Ticket #10266 (SyntaxError in volume.py) created by chimerax-bug-report@…
[…]
12:51 PM Ticket #10265 (Movie record records too many frames) created by rgong@…
[…] movie_2.mp4
12:39 PM Ticket #10261 (SyntaxError in volume.py) closed by pett
duplicate
12:36 PM Ticket #10264 (SyntaxError in volume.py) created by d.veizaj@…
[…]
12:32 PM Ticket #10257 (Crash in event loop) closed by pett
limitation: Remote display
12:31 PM Ticket #10256 (Histogram widget: operands could not be broadcast together with shapes) closed by pett
duplicate
12:29 PM Ticket #10255 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by pett
limitation: Remote display
12:28 PM Ticket #10254 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by pett
limitation: Remote display
12:08 PM Ticket #10263 (SyntaxError in volume.py) created by eric.larquet@…
[…]
12:03 PM Ticket #10262 (SyntaxError in volume.py) created by eric.larquet@…
[…]
11:38 AM Ticket #10261 (SyntaxError in volume.py) created by chimerax-bug-report@…
[…]
11:03 AM Ticket #10260 (move command ignores "atoms" option when frames specified) closed by Tom Goddard
fixed: Fixed in daily build and 1.7. The code to pass to do the move at each …
11:00 AM Ticket #10260 (move command ignores "atoms" option when frames specified) created by Caroline.Stone@…
From: "Caroline Stone (JIC) via ChimeraX-users" …
10:44 AM Ticket #10259 (SyntaxError in volume.py) created by anthony.makwanda@…
[…]
8:58 AM Ticket #10258 (SyntaxError in volume.py) created by chimerax-bug-report@…
[…]
5:06 AM Ticket #10257 (Crash in event loop) created by chimerax-bug-report@…
[…]
4:57 AM Ticket #10256 (Histogram widget: operands could not be broadcast together with shapes) created by chimerax-bug-report@…
[…]
4:12 AM Ticket #10255 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by chimerax-bug-report@…
[…]
2:42 AM Ticket #10254 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by chimerax-bug-report@…
[…]

Nov 29, 2023:

5:30 PM Ticket #8902 (Truncated HIS residue) closed by pett
fixed: Truncated histidines no longer cause Antechamber to run.
3:32 PM Ticket #10251 (Initial map colors identical) closed by Tom Goddard
fixed: Fixed in daily build and 1.7. The volume color sequence was being …
3:05 PM Ticket #10253 (No volume series slider shown when opening series of TIFF files) closed by Tom Goddard
not a bug: Slider is working. The problem in this report is that a series of 2D …
2:01 PM Ticket #10253 (No volume series slider shown when opening series of TIFF files) created by goddard@…
[…]
12:51 PM Ticket #10252 (Bug reports incorrectly show two backslashes on Log as 3 backslashes) closed by Tom Goddard
wontfix: I made a html2text github issue for this. But that repository was last …
12:31 PM Ticket #10252 (Bug reports incorrectly show two backslashes on Log as 3 backslashes) created by goddard@…
[…]
11:59 AM Ticket #10251 (Initial map colors identical) created by asarnow@…
[…]
11:50 AM Ticket #10250 (HtmlView temp file name: Invalid argument) created by chimerax-bug-report@…
[…]
10:16 AM Ticket #10249 (Crash in event loop) closed by pett
can't reproduce
9:10 AM Ticket #10248 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
9:09 AM Ticket #10247 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
9:07 AM Ticket #10245 (Restore new session in old ChimeraX) closed by pett
limitation
5:47 AM Ticket #10249 (Crash in event loop) created by chimerax-bug-report@…
[…]
3:16 AM Ticket #10248 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]
2:24 AM Ticket #10247 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]

Nov 28, 2023:

7:57 PM Ticket #10239 (Crash in GL.glDeleteBuffers() while updating tomogram surfaces) closed by Tom Goddard
fixed: Fixed in daily build and 1.7. Removed unnecessary …
7:24 PM Ticket #10239 (Crash in GL.glDeleteBuffers() while updating tomogram surfaces) reopened by Tom Goddard
Hi Greg, Maybe you know or can find this Python esoterica -- can a …
6:29 PM Ticket #10236 (Cannot update file history) closed by Tom Goddard
can't reproduce: I don't see any explanation for this error. Not able to reproduce it. …
6:01 PM Ticket #10246 (Bug reports change C:\\Users shown in log into C:\\\Users in bug report) closed by Tom Goddard
wontfix: This is most likely a bug in converting the HTML log panel html to …
5:50 PM Ticket #10246 (Bug reports change C:\\Users shown in log into C:\\\Users in bug report) created by goddard@…
[…]
5:10 PM Ticket #10234 (AlphaFold predict: wrapped C/C++ object of type ChimeraXHtmlView has ...) closed by Tom Goddard
fixed: Fixed in daily build and 1.7. If user starts an AlphaFold prediction …
4:58 PM Ticket #10216 (Symbol in scipy library not found) closed by Tom Goddard
wontfix: Will investigate fixing if this is reported again. I don't see an …
4:31 PM Ticket #10245 (Restore new session in old ChimeraX) created by chimerax-bug-report@…
[…]
2:20 PM Ticket #10159 (RFE: have out-of-disk-space produce message instead of bug report) closed by pett
fixed: Now just puts up a dialog saying "Out of disk space" with no …
11:50 AM Ticket #10243 (Relative model-map position not preserved) closed by Tom Goddard
can't reproduce: I tried saving an atomic model relative to a map in several ways and …
11:40 AM 2023-11-30 created by Tom Goddard
11:39 AM Dev2023-12-4 created by Tom Goddard
11:38 AM DeveloperMeetings edited by Tom Goddard
(diff)
11:28 AM Ticket #10244 ("Direct" modeling doesn't handle target deletion relative to template) created by pett
[…] alignment.ali
11:07 AM Ticket #10243 (Relative model-map position not preserved) created by helen.duyvesteyn@…
[…]
10:23 AM Ticket #10242 (Wrong version of regex installed) closed by Tom Goddard
limitation: We can't support installing Toolshed bundles such as SEQCROW using M1 …
10:06 AM Ticket #10240 (Crash reading matrix) closed by Tom Goddard
duplicate: Duplicate of #10239. This is probably an ArtiaX bug not deleting a …
9:43 AM Ticket #10239 (Crash in GL.glDeleteBuffers() while updating tomogram surfaces) closed by Tom Goddard
nonchimerax: Mac M1 graphics driver crash in ChimeraX code …
9:20 AM Ticket #10241 (Cannot read .chimerax) closed by pett
not a bug: Hi Ennio, Ironically, ChimeraX cannot read .chimerax files. That is …
9:08 AM Ticket #10238 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate: Hi Duc, Thanks for reporting this problem. This is a bug in the Qt …
9:06 AM Ticket #10237 (Crash in event loop) closed by pett
can't reproduce: Toolshed check was running at the time
9:02 AM Ticket #10235 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by pett
can't reproduce
8:57 AM Ticket #10232 (Crash in event loop) closed by pett
can't reproduce
5:17 AM Ticket #10242 (Wrong version of regex installed) created by andreapellegrini6698@…
[…]
4:24 AM Ticket #10241 (Cannot read .chimerax) created by ep204@…
[…]
3:58 AM Ticket #10240 (Crash reading matrix) created by chimerax-bug-report@…
[…]
3:54 AM Ticket #10239 (Crash in GL.glDeleteBuffers() while updating tomogram surfaces) created by chimerax-bug-report@…
[…]
3:26 AM Ticket #10238 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by minhducdkh@…
[…]
1:46 AM Ticket #10237 (Crash in event loop) created by chimerax-bug-report@…
[…]
12:24 AM Ticket #10236 (Cannot update file history) created by chimerax-bug-report@…
[…]

Nov 27, 2023:

10:22 PM Ticket #10235 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by chimerax-bug-report@…
[…]
9:01 PM Ticket #10234 (AlphaFold predict: wrapped C/C++ object of type ChimeraXHtmlView has ...) created by chimerax-bug-report@…
[…]
5:49 PM Ticket #10233 (Crash dumping Python thread info) created by zrizvi@…
[…]
4:24 PM Ticket #10232 (Crash in event loop) created by chimerax-bug-report@…
[…]
4:17 PM Dev2023-11-27 edited by Tom Goddard
(diff)
1:53 PM Ticket #10231 (surface zone with maxComponents option does not auto-update) closed by Tom Goddard
fixed: Fixed in daily and 1.7. Code that was handling maxComponents …
1:49 PM Ticket #10231 (surface zone with maxComponents option does not auto-update) created by goddard@…
[…]
11:26 AM Ticket #10230 (Save dialog: wrapped C/C++ object of type SaveOptionsWidget has been ...) closed by pett
duplicate: Hi Daniel, You reported this problem 2 years ago and at that time I …
11:17 AM Ticket #10230 (Save dialog: wrapped C/C++ object of type SaveOptionsWidget has been ...) created by Dbarrero@…
[…]
10:59 AM Ticket #10221 (open_command needs to handle UnicodeError) closed by pett
fixed
10:52 AM Ticket #10229 (Crash in event loop) closed by pett
can't reproduce
10:49 AM Ticket #10227 ('Tasks' object has no attribute 'remove') closed by pett
duplicate
10:42 AM Ticket #10225 (Restore new session in old ChimeraX) closed by pett
limitation
10:37 AM Ticket #10224 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
10:35 AM Ticket #10223 (Crash when asked to register) closed by pett
can't reproduce
10:29 AM Ticket #10222 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
10:22 AM Ticket #10220 (Crash showing Rapid Access at startup) closed by pett
can't reproduce
10:21 AM Ticket #10219 (MemoryError opening mmCIF files) closed by pett
duplicate
10:15 AM Ticket #10217 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate
9:48 AM Ticket #10214 (Unknown problem) closed by pett
can't reproduce: No actual problem/crash in the bug report.
9:45 AM Ticket #10213 (MemoryError opening mmCIF files) closed by pett
duplicate
12:09 AM Ticket #10229 (Crash in event loop) created by chimerax-bug-report@…
[…]

Nov 26, 2023:

8:34 PM Ticket #10228 (Can't download isolde from chimeraX) created by 12133050@…
[…]
5:10 AM Ticket #10227 ('Tasks' object has no attribute 'remove') created by chimerax-bug-report@…
[…]

Nov 25, 2023:

12:59 PM Ticket #10226 (Clipper: ArrayMemoryError updating surface) created by chimerax-bug-report@…
[…]

Nov 24, 2023:

8:52 PM Ticket #10225 (Restore new session in old ChimeraX) created by chimerax-bug-report@…
[…]
2:47 PM Ticket #10224 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]
2:38 PM Ticket #10223 (Crash when asked to register) created by chimerax-bug-report@…
[…]
5:21 AM Ticket #10222 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]
4:23 AM Ticket #10221 (open_command needs to handle UnicodeError) created by chimerax-bug-report@…
[…]
2:12 AM Ticket #10220 (Crash showing Rapid Access at startup) created by chimerax-bug-report@…
[…]
12:56 AM Ticket #10219 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]

Nov 23, 2023:

6:07 PM Ticket #10218 (ffmpeg failure) created by david.chalmers@…
[…]
10:15 AM Ticket #10217 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…
[…]
5:31 AM Ticket #10216 (Symbol in scipy library not found) created by chimerax-bug-report@…
[…]
5:18 AM Ticket #10215 (Crash in garbage collection while fetching mmCIF) created by haaris.safdari@…
[…]

Nov 22, 2023:

9:57 PM Ticket #10214 (Unknown problem) created by chimerax-bug-report@…
[…]
12:58 PM Ticket #10207 (Crash when coordinate values in PDB file are not numbers) closed by pett
can't reproduce: User first opens a PDB file with NaNs in it, which ChimeraX rejects. …
12:36 PM Ticket #10213 (MemoryError opening mmCIF files) created by chimerax-bug-report@…
[…]
11:48 AM Ticket #10205 (glClear: invalid framebuffer operation) closed by Tom Goddard
can't reproduce: OpenGL error drawing side view. glClear() invalid framebuffer …
11:45 AM Ticket #10212 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate: Hi Mark, Thanks for reporting this problem. This is a bug in the Qt …
11:43 AM Ticket #10211 (Crash opening PDB file) closed by pett
can't reproduce
11:17 AM Ticket #10212 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by maf95@…
[…]
11:00 AM Ticket #10211 (Crash opening PDB file) created by chimerax-bug-report@…
[…]
10:38 AM Ticket #10210 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett
duplicate: Hi Xavi, Thanks for reporting this problem. This is a bug in the Qt …
10:05 AM Ticket #10209 (MemoryError opening mmCIF files) closed by pett
duplicate: Hi Cristina, Thanks for reporting this problem. It is fixed in the …
9:15 AM Ticket #10208 (KeyError matching selected regions) closed by pett
duplicate: Hi Francesco, Thanks for reporting this problem. It is fixed in the …
7:29 AM Ticket #10210 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by x.aran-guiu@…
[…]
2:51 AM Ticket #10209 (MemoryError opening mmCIF files) created by cristina.moniobaca@…
[…]

Nov 21, 2023:

11:22 PM Ticket #10208 (KeyError matching selected regions) created by francesco.musiani@…
[…]
6:12 PM Ticket #10207 (Crash when coordinate values in PDB file are not numbers) created by chimerax-bug-report@…
[…]
5:40 PM Ticket #10206 (Crop mouse mode in VR with tilted slab moves wrong slab face) closed by Tom Goddard
fixed: Fixed in daily build and 1.7 release candidates dated Nov 22, 2023. …
5:25 PM Ticket #10206 (Crop mouse mode in VR with tilted slab moves wrong slab face) created by phil.cruz@…
[…]
2:43 PM Ticket #10205 (glClear: invalid framebuffer operation) created by chimerax-bug-report@…
[…]
1:33 PM Ticket #10204 (Segmentations tool divide-by-zero when open DICOM only has SEG (no CT ...) created by Elaine Meng
[…]
11:20 AM Ticket #10202 (Session restore: invalid load key) closed by pett
duplicate: Version 1.1
11:17 AM Ticket #10200 (Histogram widget: operands could not be broadcast together with shapes) closed by pett
duplicate: Hi Nikhil, Thanks for reporting this problem. It is fixed in the 1.7 …
11:16 AM Dev2023-11-27 created by Tom Goddard
11:15 AM DeveloperMeetings edited by Tom Goddard
(diff)
11:04 AM Ticket #10203 (Unknown crash) created by chencarina21@…
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9:55 AM Ticket #10202 (Session restore: invalid load key) created by chimerax-bug-report@…
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9:47 AM Ticket #10201 (Add a VR shortcut to the toolbar) created by Zach Pearson
Steffen Thomas requested this on the mailing list. Hello I'm …
9:41 AM Ticket #10199 (Crash in event loop) closed by pett
can't reproduce
9:39 AM Ticket #10197 (Crash in QMainWindow::removeDockWidget) closed by pett
can't reproduce
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