![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Timeline
Dec 8, 2022:
- 7:59 PM Ticket #8157 (Installing Linux ChimeraX daily build gives: Custom initialization of ...) created by
- [[Image]]{{{ The following bug report has been submitted: Platform: …
- 5:45 PM Ticket #8038 (Compressed .cif without .gz suffix) closed by
- limitation: Didn't hear any squawking, so assuming the status quo is okay.
- 5:09 PM Ticket #8133 (printable ribbon: "No atoms specifified" error) closed by
- fixed: Fixed by removing the @@num_atoms<500 restriction from the struts atom spec
- 5:06 PM Ticket #8138 (Fatal error: maxassem 1 has no models in it) closed by
- limitation: It was decided to use the updated versions of these entries.
- 3:17 PM NIAID2022 edited by
- (diff)
- 2:54 PM Ticket #8148 (Dead Structure Measurement tool trying to show status) closed by
- fixed
- 2:49 PM Ticket #8156 (silhouettes → tiny boxes) closed by
- nonchimerax: The incorrect silhouette edge display in ChimeraX is caused by …
- 2:44 PM Ticket #8155 (Crash saving PNG) closed by
- can't reproduce: Crash is in PIL writing image file in old ChimeraX. Have seen it …
- 2:38 PM NIAID2022 edited by
- (diff)
- 2:37 PM NIAID2022 edited by
- (diff)
- 2:35 PM Ticket #8152 (Crash in QMainWindow::removeDockWidget) closed by
- can't reproduce
- 2:34 PM Ticket #8149 (Crash in event loop after volume step 1 on .mtz data) closed by
- can't reproduce: C++ stack trace has no useful info.
- 2:32 PM Ticket #8151 (Crash creating QWebEngineProfile at startup) closed by
- duplicate
- 2:32 PM Ticket #8150 (Crash with segidChains true) closed by
- duplicate: Duplicate of #8118
- 2:26 PM Ticket #8147 (Unknown crash) closed by
- can't reproduce: Run directly from .dmg
- 2:07 PM NIAID2022 edited by
- (diff)
- 2:02 PM NIAID2022 edited by
- (diff)
- 2:01 PM Ticket #8156 (silhouettes → tiny boxes) created by
- […] Screen Shot 2022-12-08 at 2.01.40 PM.png
- 1:54 PM NIAID2022 edited by
- (diff)
- 1:18 PM Ticket #8155 (Crash saving PNG) created by
- […]
- 12:03 PM Ticket #8145 (Crash in QMainWindow::removeDockWidget) closed by
- can't reproduce: According to the Python stack trace, ToolInstance.delete() is being …
- 11:51 AM WikiStart edited by
- (diff)
- 11:40 AM Ticket #8154 (ImportError: libGLU.so.1: cannot open shared object file: No such file ...) created by
- […]
- 11:39 AM 2022-12-8 edited by
- (diff)
- 11:06 AM Ticket #8153 (Atoms lost reading pdbe_bio file, atoms not grouped by model in mmCIF file) created by
- open pdbe_bio:2MIV maxAssemblies 1 autoStyle false loses the nucleic …
- 8:19 AM Ticket #8152 (Crash in QMainWindow::removeDockWidget) created by
- […]
- 8:18 AM Ticket #8151 (Crash creating QWebEngineProfile at startup) created by
- […]
- 7:26 AM Ticket #8150 (Crash with segidChains true) created by
- […]
- 2:51 AM Ticket #8149 (Crash in event loop after volume step 1 on .mtz data) created by
- […]
Dec 7, 2022:
- 6:22 PM Ticket #8076 (Unnecessary restart required when new file formats installed) closed by
- fixed: Installing an uninstalled bundle was creating a duplicate copy of the …
- 2:13 PM Ticket #5055 (Allow BLAST gui to use a sequence viewer id and direct sequence input) reopened by
- Adding or rewording labels is fine. Is there a particular reason other …
- 1:24 PM ChangeLog edited by
- (diff)
- 12:57 PM Ticket #8148 (Dead Structure Measurement tool trying to show status) created by
- […]
- 12:45 PM Ticket #8147 (Unknown crash) created by
- […]
- 11:38 AM Ticket #8146 (Testing that Mac ARM platform is reported on M1 Macs with ChimeraX 1.5 ...) closed by
- not a bug: Correctly reports platform. Did this test to see why #8135 reported …
- 11:34 AM Ticket #8146 (Testing that Mac ARM platform is reported on M1 Macs with ChimeraX 1.5 ...) created by
- […]
- 10:31 AM Ticket #8145 (Crash in QMainWindow::removeDockWidget) created by
- […]
- 9:56 AM Ticket #8144 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Linux
- 9:54 AM Ticket #8143 (Crash running modal dialog) closed by
- can't reproduce
- 9:52 AM Ticket #8141 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Linux
- 9:52 AM Ticket #8140 (Crash showing Rapid Access at startup) closed by
- can't reproduce
- 9:20 AM Ticket #8144 (Crash showing Rapid Access at startup) created by
- […]
- 4:54 AM Ticket #8143 (Crash running modal dialog) created by
- […]
- 1:59 AM Ticket #8142 (Qt shim broken in Dec 6 daily builds) created by
- Trying to launch ChimeraX daily just gives a traceback: NOTE: …
- 12:40 AM Ticket #8141 (Crash showing Rapid Access at startup) created by
- […]
- 12:38 AM Ticket #8140 (Crash showing Rapid Access at startup) created by
- […]
Dec 6, 2022:
- 1:49 PM Ticket #8074 (After other presets: Nonstandard name for heavy atom) closed by
- nonchimerax: The RCSB is correcting this entry.
- 1:47 PM Ticket #8112 (sequence layout: list index out of range) closed by
- can't reproduce
- 1:31 PM Ticket #8139 (Missing bond) created by
- […]
- 12:22 PM Ticket #8138 (Fatal error: maxassem 1 has no models in it) created by
- […]
- 12:11 PM Ticket #8137 (1.5 not starting) closed by
- limitation: Try the RHEL/CentOS 9 rpm. We don't test on FC36, but I expect it to …
- 11:46 AM Ticket #8137 (1.5 not starting) created by
- […] startlog.txt
- 11:30 AM Ticket #8136 (Toolshed search does not find some bundles) closed by
- fixed: Fixed.
- 10:57 AM Ticket #8135 (Crash in event loop) closed by
- can't reproduce
- 10:54 AM Ticket #8134 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Hi David, Thanks for reporting this problem. We recommend upgrading …
- 10:23 AM 2022-12-8 created by
- 10:21 AM DeveloperMeetings edited by
- (diff)
- 10:20 AM Ticket #8132 (Old presets) closed by
- duplicate
- 10:19 AM Ticket #8128 (Crash in QWindowSystemInterface::handleScreenRemoved) closed by
- nonchimerax: Great that you could reproduce it. In fact it is a long standing Qt …
- 9:35 AM Ticket #8136 (Toolshed search does not find some bundles) created by
- Using the search field, searching for "phenix" or "phenixui" does not …
- 7:09 AM Ticket #8135 (Crash in event loop) created by
- […]
- 5:37 AM Ticket #8134 (Crash showing Rapid Access at startup) created by
- […]
- 5:16 AM Ticket #8133 (printable ribbon: "No atoms specifified" error) created by
- […] pdb1bfp_0.ent
- 12:57 AM Ticket #8117 (Crash in OpenMM find_clashing_atoms()) closed by
- fixed: This would happen in 1.3 if the user hit the simulation stop button …
Dec 5, 2022:
- 4:23 PM Ticket #8132 (Old presets) created by
- […]
- 4:20 PM Dev2022-12-5 edited by
- (diff)
- 4:20 PM Dev2022-12-5 edited by
- (diff)
- 4:13 PM Dev2022-12-5 edited by
- (diff)
- 3:11 PM Dev2022-12-5 edited by
- (diff)
- 3:05 PM Dev2022-12-5 edited by
- (diff)
- 3:04 PM Ticket #8131 (SDF charge Index out of bounds) created by
- […] Furfural aminoguanidine bicarbonate.sdf
- 3:03 PM Dev2022-12-5 created by
- 3:01 PM DeveloperMeetings edited by
- (diff)
- 1:52 PM Ticket #8130 ('VolumeViewer' object has no attribute 'tool_window') closed by
- can't reproduce: Not sure how the tool_window attribute can be gone. It is set when …
- 1:46 PM Ticket #8125 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by
- can't reproduce: Same as #8123, #8124 but different computer, this report with NVIDIA …
- 1:43 PM Ticket #8123 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by
- can't reproduce: Same as #8124, but different computer, this report with GeForce RTX …
- 1:38 PM Ticket #8124 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by
- can't reproduce: This message "Qt fatal error: Failed to initialize graphics backend …
- 1:08 PM Ticket #8130 ('VolumeViewer' object has no attribute 'tool_window') created by
- […]
- 12:58 PM Ticket #8127 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Linux
- 12:56 PM Ticket #8126 (hbonds: More than 2 coplanar positions specified) closed by
- not a bug: Almost certainly bad connectivity
- 12:50 PM Ticket #8122 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Hi Venkatareddy, We aren't able to reproduce this problem ourselves. …
- 11:47 AM Ticket #8121 (Negative decimal places for distance format) closed by
- can't reproduce: Duplicate #7881 Early versions of "distance style" or its settings …
- 11:38 AM Ticket #8129 (Allow Quest 2 or other standalone headsets to join ChimeraX VR meetings) created by
- Allow researchers to use ChimeraX virtual reality and join meetings …
- 11:27 AM Ticket #8119 (Movie encode: No space left on device) closed by
- nonchimerax: The error when saving a movie says OSError: [Errno 28] No space …
- 11:23 AM Ticket #8120 (Restore new session in old ChimeraX) closed by
- not a bug: Hi Shauna! Though old sessions are guaranteed to restore in new …
- 8:06 AM Ticket #8128 (Crash in QWindowSystemInterface::handleScreenRemoved) created by
- […]
- 7:29 AM Ticket #8127 (Crash showing Rapid Access at startup) created by
- […]
Dec 4, 2022:
- 11:30 PM Ticket #8126 (hbonds: More than 2 coplanar positions specified) created by
- […]
- 9:03 PM Ticket #8125 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by
- […]
- 8:49 AM Ticket #8124 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by
- […]
- 7:29 AM Ticket #8123 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by
- […]
Dec 3, 2022:
- 9:03 PM Ticket #8122 (Crash showing Rapid Access at startup) created by
- […]
- 5:07 PM Ticket #8121 (Negative decimal places for distance format) created by
- […]
- 12:16 PM Ticket #8120 (Restore new session in old ChimeraX) created by
- […] BoNT G mutants HN.cxs
- 3:07 AM Ticket #8119 (Movie encode: No space left on device) created by
- […]
- 1:49 AM Ticket #8118 (Crash with segidChains true) created by
- […]
Dec 2, 2022:
- 11:46 PM Ticket #8117 (Crash in OpenMM find_clashing_atoms()) created by
- […]
- 4:24 PM Ticket #8110 (Wrong channel names opening second copy of 3-channel microscopy) closed by
- fixed: Fixed. ImageJ tiff grid data was not assigning the grid_id for the …
- 3:46 PM Ticket #7968 (Try OpenMM 8.0 in daily builds) closed by
- fixed: Done. Updated Mac ARM and Intel and Windows and Linux to use OpenMM …
- 2:51 PM Ticket #8109 (pyproject.toml-based "make install" should reinstall) closed by
- not a bug: Works for the version of setuptools shipped with 1.5 (and hopefully …
- 2:23 PM Ticket #8115 (libGLU.so.1: cannot open shared object file: No such file or directory) closed by
- duplicate
- 2:20 PM Ticket #8113 (Crash in event loop) closed by
- can't reproduce
- 1:37 PM Ticket #5055 (Allow BLAST gui to use a sequence viewer id and direct sequence input) closed by
-
fixed:
seq_view… - 1:04 PM Ticket #3014 (Blast Protein tool: threading) closed by
- fixed: They do. :)
- 12:49 PM Ticket #8107 (Map→Style→Transparent surface not toggling transparency) closed by
- fixed: Fixed. Made map transparency toolbar button ignore hidden models even …
- 12:47 PM 2022-12-1 edited by
- (diff)
- 12:37 PM 2022-12-1 edited by
- (diff)
- 12:20 PM 2022-12-1 edited by
- (diff)
- 11:41 AM Ticket #8116 (Crash in QMenu::clear()) created by
- […]
- 11:03 AM Ticket #8115 (libGLU.so.1: cannot open shared object file: No such file or directory) created by
- […]
- 9:36 AM Ticket #8114 (read_xyz: elements: list index out of range) created by
- […]
- 8:09 AM ChangeLog edited by
- (diff)
- 8:08 AM ChangeLog edited by
- (diff)
Dec 1, 2022:
- 11:25 PM Ticket #8113 (Crash in event loop) created by
- […]
- 9:54 PM Ticket #8112 (sequence layout: list index out of range) created by
- […]
- 6:20 PM Ticket #8111 (AlphaFold prediction broken with energy minimization or pdb templates) closed by
- fixed: Fixed. Updated ChimeraX colabfold script to install dependencies for …
- 6:04 PM Ticket #8111 (AlphaFold prediction broken with energy minimization or pdb templates) created by
- Google Colab update from python 3.7 to 3.8 breaking ChimeraX AlphaFold …
- 5:36 PM Ticket #8110 (Wrong channel names opening second copy of 3-channel microscopy) created by
- […]
- 5:15 PM Ticket #8109 (pyproject.toml-based "make install" should reinstall) created by
- For bundle_info.xml-based bundles, "make install" forces a reinstall …
- 3:28 PM Ticket #8106 (Possibly provide event to double-click criteria() call) closed by
- fixed: Okay, off the same logic now all methods (label/criteria/callback) of …
- 1:16 PM Ticket #8108 (Help Viewer doesn't agree with MGnify entry page opened from Blast ...) closed by
- nonchimerax: Works on my machine; both on the daily build and my current developer …
- 12:57 PM Ticket #8108 (Help Viewer doesn't agree with MGnify entry page opened from Blast ...) created by
- When I do a blast search of ESMFold database and then in the Blast …
- 12:04 PM Ticket #5056 (Allow blastprotein command to use a UniProt name or id) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/05f11de2ccb9226f6ab3ccd5120c36 …
- 9:47 AM Ticket #8107 (Map→Style→Transparent surface not toggling transparency) created by
- […]
- 8:12 AM Ticket #8106 (Possibly provide event to double-click criteria() call) created by
- […]
- 5:01 AM Ticket #8105 (ChimeraX/lib not on library path) created by
- […]
- 1:26 AM Ticket #8104 (TmplResidue SMILES string) closed by
- fixed: Added. To get the information use …
Nov 30, 2022:
- 6:56 PM ChangeLog edited by
- (diff)
- 5:53 PM Ticket #8077 (coulombic → ribbon → coulombic: structure gone) closed by
- can't reproduce: I assume that you will just file a new ticket if this happens again …
- 11:49 AM Ticket #7970 (Allow running ESMFold structure prediction and kmer and blast search ...) closed by
- fixed: Done. Hooked up the ESMFold gui search button which runs a blast search.
- 10:06 AM Ticket #8097 (Error initializing VR: KeyError: 1002 "Oculus Link Not Enabled") closed by
- duplicate: Duplicate of #7774 Missing pyopenvr error code "Oculus Link Not …
- 9:56 AM ChangeLog edited by
- (diff)
- 9:55 AM ChangeLog edited by
- (diff)
- 9:55 AM ChangeLog edited by
- (diff)
- 9:53 AM ChangeLog edited by
- (diff)
- 9:35 AM Ticket #7961 (Clipper fails to build in Windows - Nov 3 release candidate) closed by
- fixed: Tristan reported this morning that his bundle builds without his …
- 8:42 AM Ticket #8102 (Crash during selection-promotion process) closed by
- can't reproduce
- 8:40 AM Ticket #8101 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 8:39 AM Ticket #8100 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 8:32 AM Ticket #8104 (TmplResidue SMILES string) created by
- […]
- 8:00 AM Ticket #8103 (Shell tool: Qt enum vs. int) created by
- […]
- 7:58 AM Ticket #8102 (Crash during selection-promotion process) created by
- […]
- 5:23 AM Ticket #8101 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 5:02 AM Ticket #8100 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 4:47 AM Ticket #8099 (ISOLDE: close session: 'AtomicStructure' object has no attribute ...) created by
- […]
- 2:12 AM Ticket #8098 (ISOLDE: 'AtomicStructure' object has no attribute 'session') created by
- […]
Nov 29, 2022:
- 6:54 PM Ticket #8041 (Add ESMFold database to BlastProtein) closed by
- fixed: Thanks for your patience. As you said, …
- 4:56 PM ChangeLog edited by
- (diff)
- 10:41 AM Ticket #8097 (Error initializing VR: KeyError: 1002 "Oculus Link Not Enabled") created by
- […]
- 10:40 AM Ticket #8059 (chimeraX freezing) closed by
- limitation: Yeah! Thank you for letting us know.
- 10:07 AM 2022-12-1 created by
- 10:06 AM DeveloperMeetings edited by
- (diff)
- 9:51 AM Milestone 1.5 completed
- == Released == * November 29, 2022 == Feature Freeze and Branch == …
- 9:06 AM Ticket #8095 (Crash in event loop) closed by
- can't reproduce
- 9:03 AM Ticket #8093 (Restore new session in old ChimeraX) closed by
- not a bug
- 7:37 AM Ticket #8096 (Antechamber on M2: Bad CPU type in executable) created by
- […]
- 6:48 AM Ticket #8095 (Crash in event loop) created by
- […]
- 6:20 AM Ticket #8094 (ArtiaX session save: Unknown class name 'MarkerSetPlus') created by
- […]
- 6:16 AM ChangeLog edited by
- (diff)
- 3:59 AM Ticket #8093 (Restore new session in old ChimeraX) created by
- […]
Nov 28, 2022:
- 5:39 PM ChangeLog edited by
- (diff)
- 3:56 PM Ticket #8092 (Reading 2D ImageJ microscopy: IndexError: index out of range) closed by
- fixed: Fixed. The code was using zsize equal to the number of tiff pages …
- 3:50 PM Ticket #8092 (Reading 2D ImageJ microscopy: IndexError: index out of range) created by
- […]
- 3:41 PM Dev2022-11-28 edited by
- (diff)
- 3:40 PM Dev2022-11-28 edited by
- (diff)
- 3:38 PM Dev2022-11-28 edited by
- (diff)
- 3:36 PM Dev2022-11-28 created by
- 3:34 PM DeveloperMeetings edited by
- (diff)
- 3:00 PM Ticket #8086 (AlphaFold predict: ValueError: could not broadcast input array from shape) closed by
- nonchimerax: This error is in ColabFold, we did not write that code. Colabfold is …
- 2:46 PM Ticket #7301 (Freeze on Ubuntu 22.04 + registration date/time error) closed by
- duplicate: Duplicate of #8059
- 2:13 PM Ticket #8090 (Graphics crash, macOS 12.4, Intel Iris Plus Graphics 645) closed by
- nonchimerax: Apple Intel graphics driver crash
- 1:40 PM Ticket #8091 (UniProt fetch: HTTP Error 405: Not Allowed) closed by
- duplicate: Hi Federica, Thanks for reporting this problem. UniProt changed the …
- 1:32 PM Ticket #8081 (Graphics crash, macOS 10.15.7, NVIDIA GeForce GTX 780M) closed by
- nonchimerax: Apple Intel graphics driver crash.
- 1:30 PM Ticket #8088 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: 1.3
- 1:29 PM Ticket #8087 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: 1.3
- 1:24 PM Ticket #8085 (Modeller target is None) closed by
- duplicate: This a duplicate of #7992 and is fixed on the develop branch. Should …
- 1:18 PM Ticket #8084 (Crash during screen changed) closed by
- duplicate
- 1:09 PM Ticket #8082 (Volume not in Surface Color volume menu) closed by
- can't reproduce: Seems to imply that the map is not in session.models or that it is not …
- 11:56 AM Ticket #8079 (Crash in event loop) closed by
- can't reproduce
- 1:48 AM Ticket #8091 (UniProt fetch: HTTP Error 405: Not Allowed) created by
- […] Captura de Pantalla 2022-11-28 a las 10.46.58.png
Nov 27, 2022:
- 5:38 PM Ticket #8090 (Graphics crash, macOS 12.4, Intel Iris Plus Graphics 645) created by
- […]
- 2:17 AM Ticket #8089 (Clipper: AttributeError: 'NoneType' object has no attribute ...) created by
- […]
- 2:03 AM Ticket #8088 (Crash using File→Open on Windows and/or in return statement) created by
- […]
Nov 25, 2022:
- 11:08 PM Ticket #8070 (libGLU.so.1: cannot open shared object file: No such file or directory) closed by
- worksforme: The fix is to install libGLU. On RHEL derived systems, that is in the …
- 10:48 AM Ticket #8087 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 9:57 AM Ticket #8086 (AlphaFold predict: ValueError: could not broadcast input array from shape) created by
- […] Screen Shot 2022-11-25 at 10.53.39 AM.png
- 8:42 AM Ticket #8085 (Modeller target is None) created by
- […]
- 7:32 AM Ticket #8084 (Crash during screen changed) created by
- […]
Nov 24, 2022:
- 7:53 AM Ticket #8083 (ISOLDE session restore: 'AtomicStructure' object has no attribute 'session') created by
- […]
- 7:41 AM Ticket #8082 (Volume not in Surface Color volume menu) created by
- […]
- 4:51 AM Ticket #8081 (Graphics crash, macOS 10.15.7, NVIDIA GeForce GTX 780M) created by
- […]
- 3:25 AM Ticket #8080 (Crash repeating "style ball" command) created by
- […]
Nov 23, 2022:
- 9:45 PM Ticket #8079 (Crash in event loop) created by
- […]
- 5:58 PM ChangeLog edited by
- (diff)
- 4:07 PM Ticket #8078 (DICOM tools: please hook up help to context menu) closed by
- fixed: I also cherry-picked your documentation changes into the release branch.
- 3:13 PM Ticket #3014 (Blast Protein tool: threading) reopened by
- 1:44 PM Ticket #8073 (Could not come up with unique atom name in mega-residue) closed by
- limitation: The entire 40-residue nucleic acid moiety in 4r8i is composed of …
- 11:37 AM Ticket #8078 (DICOM tools: please hook up help to context menu) created by
- DICOM tools look good, just need to hook documentation up to context …
- 11:19 AM Ticket #8077 (coulombic → ribbon → coulombic: structure gone) created by
- […]
- 9:20 AM Ticket #8071 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: 1.3
- 9:09 AM Ticket #8076 (Unnecessary restart required when new file formats installed) created by
- e.g. when SEQCROW installed to read .xyz files
- 7:51 AM Ticket #8075 (Printable ribbon preset hangs) created by
- […]
- 7:41 AM Ticket #8074 (After other presets: Nonstandard name for heavy atom) created by
- […]
- 6:50 AM Ticket #8073 (Could not come up with unique atom name in mega-residue) created by
- […]
Nov 22, 2022:
- 5:20 PM Ticket #8072 (AlphaFold coloring panel does not list AlphaFold models in menu) closed by
- fixed: Fixed. Show all structures in alphafold coloring gui but set the menu …
- 4:48 PM Ticket #8072 (AlphaFold coloring panel does not list AlphaFold models in menu) created by
- […]
- 4:31 PM Ticket #8056 (Problem opening Gaussian output: Unknown element detected: Variables) closed by
- fixed
- 3:14 PM Ticket #8071 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 2:35 PM Ticket #8070 (libGLU.so.1: cannot open shared object file: No such file or directory) created by
- […]
- 1:42 PM Ticket #8069 (BlastProtein: cannot import name '_log_alphafold_sequence_info') closed by
- fixed: Fixed. I changed the AlphaFold private method that Blast Protein was …
- 1:29 PM Ticket #8069 (BlastProtein: cannot import name '_log_alphafold_sequence_info') created by
- […]
- 11:35 AM Ticket #8068 (Make selection, coloring, mesh and dot styles work on BILD models) created by
- None of the standard operations work on BILD models. I made a single …
- 11:05 AM Ticket #8067 (Save independent rotation mouse mode in sessions) created by
- […]
- 9:35 AM Ticket #8052 (limit formats in Save dialog to ones appropriate for current models) closed by
- wontfix: Given that, as Tom points out, there may be as many downsides as …
- 9:20 AM Ticket #8066 (saving attribute values) closed by
- fixed: Hi Björn, Thanks for reporting this problem. The problem is that the …
- 3:27 AM Ticket #8066 (saving attribute values) created by
- […]
Nov 21, 2022:
- 6:59 PM Ticket #6774 (Unknown crash) closed by
- can't reproduce: This looks like a crash in the Qt window toolkit, but there is not …
- 6:57 PM Ticket #6924 (QXcbConnection: XCB error:) closed by
- nonchimerax: No reply from reporter.
- 6:57 PM Ticket #6961 (AlphaFold prediction: A UTF-8 locale is required. Got ANSI_X3.4-1968) closed by
- can't reproduce: I have not seen this error in 6 months. Maybe our switch to using …
- 6:55 PM Ticket #7209 (Mac notarization fails about 1/4 of the time: "A timestamp was ...) closed by
- fixed: I increased the number of notarization retries from 1 to 4 and …
- 6:51 PM Ticket #7417 ("cofr" info misleading) closed by
- limitation
- 6:50 PM Ticket #7428 (Inconsistent stack trace information) closed by
- limitation: I may improve the log handling in the future to allow for multiple …
- 6:46 PM Ticket #7524 (Save image to desktop: permission denied) closed by
- duplicate: ChimeraX was changed more than a year ago so it will not set the …
- 6:42 PM Ticket #7678 (Crashes creating QWebEngineProfile on Windows) closed by
- nonchimerax
- 6:41 PM Ticket #7739 (QPainter::begin: Paint device returned engine == 0, type: 2) closed by
- can't reproduce
- 6:40 PM Ticket #7878 ('show' unexpectedly showing whole chains) closed by
- can't reproduce: No reply from reporter.
- 6:38 PM Ticket #8010 (Image stack:tuple index out of range) closed by
- can't reproduce: Probably requires an incomplete set of files to reproduce this.
- 5:18 PM Ticket #8064 (clicking Model Panel Info to show DICOM Browser either gives traceback ...) closed by
- fixed: This should be fixed tomorrow. The DICOM browser was rewritten to make …
- 4:58 PM Ticket #8065 (Log chain table with RMSD for AlphaFold multimer predictions) created by
- […]
- 4:44 PM Ticket #8015 ('DICOMBrowserTool' object has no attribute '_see_what_happened') closed by
- fixed: Should be fixed in tomorrow's daily build and release candidate.
- 2:42 PM Ticket #8019 (Bad alternate locations) closed by
- limitation: Okay, I submitted a pull request that will skip a preset when these …
- 1:26 PM Ticket #8055 (AlphaFold: I/O operation on closed file) closed by
- fixed
- 1:25 PM Ticket #8055 (AlphaFold: I/O operation on closed file) reopened by
- Fixed. The release of jax 0.3.25 broke ColabFold. Unfortunately …
- 11:58 AM Ticket #8064 (clicking Model Panel Info to show DICOM Browser either gives traceback ...) created by
- […]
- 10:30 AM Ticket #8063 (Crash running AlphaFold prediction) closed by
- can't reproduce
- 10:29 AM Ticket #8062 (Status bar: wrapped C/C++ object of type QScreen has been deleted) closed by
- duplicate: This bug was fixed about a year ago. It happens when running ChimeraX …
- 10:23 AM Ticket #8055 (AlphaFold: I/O operation on closed file) closed by
- nonchimerax: That is an error in AlphaFold code, not in ChimeraX. It says it is …
- 10:21 AM Ticket #8061 (MD viewer: No self.atomLocations) closed by
- not a bug: Not a trajectory (self.atomLocations only set on ENDMDL record).
- 10:19 AM Ticket #8063 (Crash running AlphaFold prediction) created by
- […]
- 9:29 AM Ticket #8060 (crash running modal dialog) closed by
- can't reproduce
- 9:26 AM Ticket #8058 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: Hi Uzay, Thanks for reporting this problem. We believe it is fixed …
- 9:21 AM Ticket #8057 (Save session: Basic Actions: 'QEventLoop' object has no attribute 'exec_') closed by
- duplicate
- 9:14 AM Ticket #8054 (Crash processing geometry change) closed by
- can't reproduce
- 9:12 AM Ticket #8053 (Crash creating QTimer) closed by
- can't reproduce
- 8:58 AM Ticket #8050 (Crash in event loop) closed by
- can't reproduce
- 6:10 AM Ticket #8062 (Status bar: wrapped C/C++ object of type QScreen has been deleted) created by
- […]
- 5:43 AM Ticket #8061 (MD viewer: No self.atomLocations) created by
- […]
- 3:03 AM Ticket #8060 (crash running modal dialog) created by
- […]
- 2:51 AM Ticket #8059 (chimeraX freezing) created by
- […]
Nov 20, 2022:
- 5:47 PM Ticket #8058 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 10:58 AM Ticket #8057 (Save session: Basic Actions: 'QEventLoop' object has no attribute 'exec_') created by
- […]
Nov 19, 2022:
- 9:05 PM Ticket #8056 (Problem opening Gaussian output: Unknown element detected: Variables) created by
- […] gau_ma.h2s-opt-freq-b3lyp-d3-qzvppd.log
- 10:04 AM Ticket #8055 (AlphaFold: I/O operation on closed file) created by
- […] Screen Shot 2022-11-19 at 11.00.32 AM.png
- 7:17 AM Ticket #8054 (Crash processing geometry change) created by
- […]
- 6:45 AM Ticket #8053 (Crash creating QTimer) created by
- […]
Nov 18, 2022:
- 5:04 PM Ticket #7997 (Add Charges: Nonstandard name for heavy atom) closed by
- fixed: Tomorrow's daily build will handle phosphorylated 5' termini.
- 3:13 PM Ticket #8052 (limit formats in Save dialog to ones appropriate for current models) created by
- It would be nice if the list of output formats in the Save dialog …
- 1:14 PM Ticket #8051 (ISOLDE: matplotlib: 'box_aspect' and 'fig_aspect' must be positive + ...) created by
- […]
- 10:41 AM Ticket #8049 (MemoryError saving large image) closed by
- nonchimerax: Ran out of memory trying to save an 6000 x 4000 image. PIL tried to …
- 10:01 AM Ticket #8050 (Crash in event loop) created by
- […]
Nov 17, 2022:
- 11:23 PM Ticket #8049 (MemoryError saving large image) created by
- […]
- 3:40 PM 2022-11-17 edited by
- (diff)
- 3:40 PM 2022-11-17 edited by
- (diff)
- 3:02 PM Dev2022-11-17 created by
- 2:54 PM DeveloperMeetings edited by
- (diff)
- 1:25 PM Ticket #7992 (Modeller target is None) closed by
- fixed: Fix: …
- 1:23 PM Ticket #8048 (Crash in timer callback) created by
- […]
- 10:36 AM ChangeLog edited by
- (diff)
- 10:22 AM 2022-11-17 edited by
- (diff)
- 9:53 AM Ticket #8047 (Crash using File→Open dialog on Windows and/or returning from function) closed by
- can't reproduce: 1.3
- 9:51 AM Ticket #8046 (Crash in garbage collection after showing 30000+ pseudobonds) closed by
- can't reproduce
- 4:39 AM Ticket #8047 (Crash using File→Open dialog on Windows and/or returning from function) created by
- […]
Nov 16, 2022:
- 4:18 PM Ticket #7769 (Crash reading mmCIF) closed by
- can't reproduce: Learned on 11 October 2022 that the .cif file had been deleted.
- 4:02 PM Ticket #3534 (Parsing complaint about Ligand Expo cif files) closed by
- nonchimerax: Yes, that is illegal according to the CIF standard, …
- 3:45 PM Ticket #7925 (DICOM Browser: bundle forgot to override start_tool method) closed by
- fixed
- 2:54 PM Ticket #8045 (Bad symmetry table entries) closed by
- fixed
- 2:42 PM Ticket #8034 ("make clean" compiles bundle) closed by
- fixed: Should be fixed by …
- 1:35 PM Ticket #8022 (Bad residue names from Mol2 file) closed by
- fixed: The Mol2 reader wasn't adding missing-structure pseudobonds when …
- 1:23 PM Ticket #8046 (Crash in garbage collection after showing 30000+ pseudobonds) created by
- […]
- 1:02 PM Ticket #8045 (Bad symmetry table entries) created by
- Click on entry 1 of the symmetry table for the attached file works …
- 12:06 PM 2022-11-17 edited by
- (diff)
- 10:32 AM Ticket #8043 (glGetFramebufferAttachmentParameteriv: invalid enumerant) closed by
- limitation: ChimeraX requires Windows 10 or 11. Maybe it will run on Windows 7 …
- 9:26 AM Ticket #8037 (Charge-determination failure for CAS in 1fyw) closed by
- limitation: Neither charge-determination method can handle the arsenic in the CAS …
- 8:56 AM Ticket #8044 (glGetFramebufferAttachmentParameteriv: invalid enumerant) closed by
- duplicate
- 8:53 AM Ticket #8042 (Unknown crash) closed by
- can't reproduce
- 8:51 AM Ticket #8039 (Charge-determination convergence failure for 4pk2) closed by
- limitation: The charge determination works with the Gasteiger method, and …
- 7:49 AM Ticket #8044 (glGetFramebufferAttachmentParameteriv: invalid enumerant) created by
- […]
- 6:52 AM Ticket #8043 (glGetFramebufferAttachmentParameteriv: invalid enumerant) created by
- […]
Nov 15, 2022:
- 11:10 PM Ticket #7993 (Mesa-Utils package required) closed by
- can't reproduce: I don't know where those errors are coming from. But if you uninstall …
- 6:24 PM Ticket #8040 (alphafold pae command with no structure gives AttributeError) closed by
- fixed: Fixed in ChimeraX 1.5 and daily build. The chain divider lines on the …
- 6:20 PM Ticket #8042 (Unknown crash) created by
- […]
- 6:11 PM Ticket #8041 (Add ESMFold database to BlastProtein) created by
- The ESMFold metagenomic atlas is very similar to the AlphaFold …
- 5:49 PM Ticket #7945 (Read PAE matrix: No module named 'jax') closed by
- fixed: Duplicate of #8032. Fixed.
- 5:36 PM Ticket #8023 (All white coulombic) closed by
- not a bug: The PDB has a spurious TER card in the middle of chain A, between …
- 5:28 PM Ticket #8032 (Read PAE matrix: No module named 'jax') closed by
- fixed: Fixed in ChimeraX 1.5 release candidate and daily build. I put in a …
- 5:16 PM Ticket #8024 (PubChem: #charges != #atoms) closed by
- fixed: Now in addition to a missing charges section of the SDF file meaning …
- 5:04 PM Ticket #7967 (Ubuntu 22 ChimeraX installer is replacing symlinks by copies of libraries) closed by
- fixed: Needed syslinks=True argument to shutil.copytree()
- 4:57 PM Ticket #8036 (Not able to sign in to Google Colab for AlphaFold prediction) closed by
- worksforme
- 4:40 PM Ticket #8026 (sqm failure on all-nonstandard nucleic acid) closed by
- fixed: Switched the coulombic preset to use Gasteiger charge-determination …
- 4:40 PM Ticket #8040 (alphafold pae command with no structure gives AttributeError) created by
- […]
- 4:03 PM Ticket #8028 (microheterogeneity) closed by
- limitation: ChimeraX simply does not handle microheterogeneity (e.g residue 782 in …
- 2:38 PM Ticket #8029 (non-standard C-terminal oxygen name) closed by
- fixed: Add Charge will allow 1OCT and 2OCT as C-terminal oxygen names …
- 2:05 PM ChangeLog edited by
- (diff)
- 2:04 PM ChangeLog edited by
- (diff)
- 1:54 PM Ticket #8039 (Charge-determination convergence failure for 4pk2) created by
- […] 4pk2.pdb
- 1:53 PM ChangeLog edited by
- (diff)
- 1:22 PM Ticket #8038 (Compressed .cif without .gz suffix) created by
- […] 2fae-assembly-1.cif
- 1:16 PM Ticket #8037 (Charge-determination failure for CAS in 1fyw) created by
- […]
- 12:01 PM Ticket #8031 (Incorrect element column in PDB file) closed by
- not a bug: The input PDB file is just bad. The "element' column is *mostly* the …
- 11:35 AM Ticket #8035 (Bad formal charge estimate) closed by
- limitation: The ChargeError does get caught by the command processing code, but …
- 10:14 AM Ticket #8036 (Not able to sign in to Google Colab for AlphaFold prediction) created by
- […]
- 10:02 AM 2022-11-17 created by
- 10:01 AM DeveloperMeetings edited by
- (diff)
- 9:56 AM Ticket #8035 (Bad formal charge estimate) created by
- […] 1av7.pdb
Nov 14, 2022:
- 6:09 PM Ticket #8034 ("make clean" compiles bundle) created by
- When doing "make clean" in the mmcif bundle with an error in …[…]
- 5:26 PM Ticket #8033 (SEQCROW: memory reporting: unsupported operand type(s) for *: ...) created by
- […]
- 3:07 PM Ticket #8030 (PDB file reader accepts "nan" coordinates without warning) closed by
- fixed: Use numpy.isnan() to check the coordinates coming from the PDB reader. …
- 2:17 PM Ticket #8032 (Read PAE matrix: No module named 'jax') created by
- […]
- 2:01 PM Ticket #8025 (Small molecule CIF) closed by
- duplicate: Duplicate of #4479 -- will add Kristen to recipient list for that ticket
- 1:14 PM Ticket #8031 (Incorrect element column in PDB file) created by
- […] 2.5F phyre prediction.pdb
- 11:31 AM Ticket #8020 (Encode movie: Output directory does not exist) closed by
- duplicate: You probably are using Microsoft OneDrive which relocates your Desktop …
- 11:16 AM Ticket #8014 (Surface computation: cannot convert float NaN to integer) closed by
- nonchimerax: Probable bad PDB file with NaN atom coordinates. User opened a file …
- 11:14 AM Ticket #8030 (PDB file reader accepts "nan" coordinates without warning) created by
- A few times we have seen users open PDB files which have coordinates …
- 10:58 AM Ticket #8011 (Movie encoding: No space left on device) closed by
- nonchimerax: Making a spin movie of 180 frames, temp directory had no disk space. …
- 10:52 AM Ticket #8029 (non-standard C-terminal oxygen name) created by
- […] 3ZG6-SIRT6.pdb
- 10:48 AM Ticket #8007 (Picking: Singular matrix) closed by
- nonchimerax: Opened 7ud4.pdb then "sym #1 biomt" then mouse over causes an error …
- 10:33 AM Ticket #8028 (microheterogeneity) created by
- […] 4gfh.pdb
- 10:29 AM Ticket #8027 (Add "save image" context menu entry for AlphaFold PAE plots) closed by
- fixed: Added to daily build, not in 1.5.
- 10:27 AM Ticket #8027 (Add "save image" context menu entry for AlphaFold PAE plots) created by
- […]
- 10:19 AM Ticket #8018 (Crash showing Rapid Access at startup) closed by
- can't reproduce
- 10:09 AM Ticket #8026 (sqm failure on all-nonstandard nucleic acid) created by
- […]
- 9:44 AM Ticket #8008 (ISOLDE: dead Structure model) closed by
- fixed: ... what. Why on earth would a user be installing ISOLDE into ChimeraX …
- 9:42 AM Ticket #8012 (Crash using File→Save on Windows and/or in return statement) closed by
- can't reproduce: Hi Andrew, We believe this problem is fixed in the latest release of …
- 9:35 AM Ticket #8009 (ISOLDE: dead Structure model) closed by
- duplicate: Same as #8008, except additional follow-on errors.
- 9:26 AM Ticket #8025 (Small molecule CIF) created by
- […] 168875.cif
- 9:22 AM Ticket #8003 (Crash adjusting window sizes) closed by
- can't reproduce: Hi Chai, Thanks for reporting this problem. From the code traceback, …
- 9:21 AM Ticket #8024 (PubChem: #charges != #atoms) created by
- […]
- 9:11 AM Ticket #8023 (All white coulombic) created by
- […] NTD_CCD_CTD_pymol_1-coot-0_modified.pdb
- 9:06 AM Ticket #8022 (Bad residue names from Mol2 file) created by
- […] CCR5.mol2
- 9:01 AM Ticket #8021 (Coulombic all white) created by
- […] dyn1_dimer.pdb
- 8:46 AM Ticket #8020 (Encode movie: Output directory does not exist) created by
- […]
- 7:15 AM Ticket #8019 (Bad alternate locations) created by
- […] out_15898.pdb
- 4:46 AM Ticket #8018 (Crash showing Rapid Access at startup) created by
- […]
- 4:12 AM Ticket #8017 (Clipper: Spgr_descr: No such HM symbol) created by
- […]
- 4:12 AM Ticket #8016 (Clipper: Unrecognised space group string (empty string)) created by
- […]
Nov 13, 2022:
- 2:58 PM Ticket #8015 ('DICOMBrowserTool' object has no attribute '_see_what_happened') created by
- […]
- 10:22 AM Ticket #8014 (Surface computation: cannot convert float NaN to integer) created by
- […]
Nov 12, 2022:
- 2:59 PM Ticket #8013 (Compare alphafold database structure conformations for all sequences ...) created by
- It might be informative to see the different conformations AlphaFold …
- 1:25 PM Ticket #8012 (Crash using File→Save on Windows and/or in return statement) created by
- […]
- 11:46 AM Ticket #8011 (Movie encoding: No space left on device) created by
- […]
- 8:23 AM Ticket #8010 (Image stack:tuple index out of range) created by
- […]
- 1:07 AM Ticket #8009 (ISOLDE: dead Structure model) created by
- […]
- 1:06 AM Ticket #8008 (ISOLDE: dead Structure model) created by
- […]
Nov 11, 2022:
- 5:47 PM Ticket #7725 (Update to AlphaFold database version 4) closed by
- fixed: Fixed in 1.5 and daily build. I've updated the alphafold and …
- 5:28 PM ChangeLog edited by
- (diff)
- 5:27 PM ChangeLog edited by
- (diff)
- 5:19 PM ChangeLog edited by
- (diff)
- 2:36 PM Ticket #8007 (Picking: Singular matrix) created by
- […]
- 1:51 PM Ticket #8006 (Improve granularity of webservice poll timing) created by
- We use client-side polling to determine when webservice jobs are …
- 12:58 PM Ticket #7984 (Segger: Color array dimension 3 must be one more than index array ...) closed by
- fixed
- 12:50 AM Ticket #7976 (Toolshed upload internal server error) closed by
- fixed: I put a fix in, please try uploading again and confirm that it works. …
Nov 10, 2022:
- 6:29 PM 2022-11-10 edited by
- (diff)
- 6:25 PM Ticket #8005 (Make a mouse mode to extract non-axis aligned volume subregions) created by
- For extracting features from electron tomograms it is useful to drag a …
- 6:16 PM NIAID2022 edited by
- (diff)
- 6:15 PM NIAID2022 edited by
- (diff)
- 6:07 PM Ticket #7989 (Graphics crash, macOS 12.4, Intel Iris Plus Graphics 645) closed by
- nonchimerax: Apple Intel graphics driver crash.
- 5:43 PM Ticket #8004 (ChimeraX sometimes very slow to start) created by
- ChimeraX sometimes takes 30 seconds to a minute to startup. We should …
- 5:38 PM Ticket #8003 (Crash adjusting window sizes) created by
- […]
- 5:30 PM Ticket #7801 (Out of memory opening 7f1q) closed by
- can't reproduce
- 5:08 PM Ticket #8002 (Blast error searching Alphafold database version 4) closed by
- duplicate
- 5:07 PM Ticket #8002 (Blast error searching Alphafold database version 4) reopened by
- 5:05 PM Ticket #8002 (Blast error searching Alphafold database version 4) closed by
- duplicate: Testing alphafold database version 4 blast search for ticket #7725. …
- 4:45 PM Ticket #8002 (Blast error searching Alphafold database version 4) created by
- […]
- 3:22 PM Ticket #7988 (chimerax.add_charge.settings missing) closed by
- fixed: Yay!
- 3:19 PM Ticket #8001 (H-bonds: More than 2 coplanar positions specified) closed by
- not a bug: Hi Phil, It looks like several residues are missing alternate …
- 3:05 PM Ticket #8000 (Crash showing Rapid Access at startup) closed by
- can't reproduce
- 3:03 PM Ticket #7998 (Crash in event loop after "select") closed by
- can't reproduce
- 2:31 PM Ticket #7991 (Crash in event loop) closed by
- can't reproduce
- 2:22 PM Ticket #8001 (H-bonds: More than 2 coplanar positions specified) created by
- […] out_15898.pdb
- 1:55 PM NIAID2022 edited by
- (diff)
- 1:44 PM NIAID2022 edited by
- (diff)
- 12:59 PM Ticket #7990 (Crash using File→Open dialog on Windows and/or returning from function) closed by
- can't reproduce: 1.3
- 12:47 PM 2022-11-10 edited by
- (diff)
- 11:23 AM Ticket #8000 (Crash showing Rapid Access at startup) created by
- […]
- 10:56 AM Ticket #7999 (Marker operations don't work through transparent surfaces) created by
- […]
- 10:39 AM Ticket #7998 (Crash in event loop after "select") created by
- […]
- 9:02 AM Ticket #7997 (Add Charges: Nonstandard name for heavy atom) created by
- […]
- 8:36 AM Ticket #7987 (Crash in event loop) closed by
- can't reproduce
- 7:48 AM Ticket #7996 (Rebuild residue to template: template problem) created by
- […]
- 7:15 AM Ticket #7995 (Crash in color chooser) created by
- […]
- 7:10 AM Ticket #7994 (Crash in color chooser) created by
- […]
- 4:42 AM Ticket #7993 (Mesa-Utils package required) created by
- […]
- 4:36 AM Ticket #7992 (Modeller target is None) created by
- […]
- 4:01 AM Ticket #7991 (Crash in event loop) created by
- […]
Nov 9, 2022:
- 6:51 PM Ticket #7990 (Crash using File→Open dialog on Windows and/or returning from function) created by
- […]
- 3:55 PM ChangeLog edited by
- (diff)
- 2:01 PM Ticket #7989 (Graphics crash, macOS 12.4, Intel Iris Plus Graphics 645) created by
- […]
- 1:08 PM Ticket #7982 (Cannot upload bundle) closed by
- fixed: New apache configuration had limit of default limit of 12.5Mbytes. …
- 12:55 PM Ticket #7988 (chimerax.add_charge.settings missing) created by
- […]
- 11:35 AM Ticket #6593 (CentOS 7 daily build still Qt5) closed by
- fixed: No longer building for CentOS 7.
- 11:12 AM Ticket #7981 (devel install failure) closed by
- fixed: Fixed. The current Mac universal build release candidate on the …
- 11:09 AM Ticket #7987 (Crash in event loop) created by
- […]
- 10:42 AM Ticket #7985 (Graphics crash, macOS 13.0, Intel Iris Plus Graphics 645) closed by
- nonchimerax: Apple Intel graphics driver crash.
- 10:19 AM Ticket #7986 (Make side view clip plane lines thicker) created by
- […] […] […]
- 10:03 AM Ticket #7979 (Graphics crash, macOS 11.6, Intel Iris Plus Graphics 655) closed by
- nonchimerax: Apple Intel graphics driver crash.
- 10:00 AM Ticket #7983 (open PDB file: 'utf-8' codec can't decode byte) closed by
- can't reproduce: Would need the PDB file to assess whether this has already been fixed …
- 8:44 AM Ticket #7985 (Graphics crash, macOS 13.0, Intel Iris Plus Graphics 645) created by
- […]
- 8:39 AM Ticket #7984 (Segger: Color array dimension 3 must be one more than index array ...) created by
- […]
- 7:29 AM Ticket #7983 (open PDB file: 'utf-8' codec can't decode byte) created by
- […]
- 1:59 AM Ticket #7982 (Cannot upload bundle) created by
- […]
- 1:21 AM Ticket #7981 (devel install failure) created by
- […]
Nov 8, 2022:
- 11:52 PM Ticket #7959 (WSL2: Attempt to retrieve context when no valid context) closed by
- nonchimerax: Glad to hear it was an OpenGL bug and it was fixed by updating mesa. …
- 1:53 PM Ticket #7980 (Unknown crash) created by
- […]
- 1:28 PM Ticket #7979 (Graphics crash, macOS 11.6, Intel Iris Plus Graphics 655) created by
- […]
- 11:39 AM Ticket #7978 (ISOLDE monkey patch for alphafold sequence search gives obsolete warning) closed by
- fixed: Fixed in next ISOLDE release.
- 11:20 AM Ticket #7978 (ISOLDE monkey patch for alphafold sequence search gives obsolete warning) created by
- […]
- 10:51 AM Ticket #7977 (DICOM: SEG models not aligned with CT 4) created by
- In the RIDER lung example for one patient (data …
- 10:44 AM Ticket #7222 (Make universal Intel/ARM Mac distribution) closed by
- fixed: Done. Mac universal builds have been on the download page about a month.
- 10:10 AM 2022-11-10 created by
- 10:07 AM 2022-11-3 edited by
- (diff)
- 10:06 AM DeveloperMeetings edited by
- (diff)
- 9:04 AM Ticket #7975 (Restore new session in old ChimeraX) closed by
- limitation: Hi Anja, ChimeraX sessions are guaranteed to restore in the same …
- 9:00 AM Ticket #7974 (Non alphanumeric atom names) closed by
- limitation: Hi Yunhao, Since the atom-specifier syntax uses a lot of …
- 8:43 AM Ticket #7972 (Crash in QDockWidget::event) closed by
- can't reproduce: No Python traceback
- 8:41 AM Ticket #7976 (Toolshed upload internal server error) created by
- […] upload2.jpg upload1.jpg
- 2:09 AM Ticket #7975 (Restore new session in old ChimeraX) created by
- […]
- 12:09 AM Ticket #7896 (DICOM: volume models not assigned unique colors) closed by
- fixed: Fixed on develop and in the 1.5 release candidate …
- 12:07 AM Ticket #7965 (Usage: arg_type is str) closed by
- limitation: It is the "measure composite"'s palette argument on line 267 of …
Note:
See TracTimeline
for information about the timeline view.
