Opened 3 years ago

Closed 3 years ago

Last modified 3 years ago

#8154 closed defect (limitation)

ImportError: libGLU.so.1: cannot open shared object file: No such file or directory

Reported by: shijian_zhang@… Owned by: Greg Couch
Priority: normal Milestone:
Component: Platform Version:
Keywords: Cc: Tom Goddard, Zach Pearson
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description (last modified by Eric Pettersen) 

The following bug report has been submitted:
Platform:        Linux-3.10.0-1160.80.1.el7.x86_64-x86_64-with-glibc2.17
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
OTE: available bundle cache has not been initialized yet
WARNING: Traceback (most recent call last):
  File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-ChimeraX/lib/python3.9/site-packages/chimerax/core/toolshed/info.py", line 484, in get_module
    m = importlib.import_module(self.package_name)
  File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-ChimeraX/lib/python3.9/importlib/__init__.py", line 127, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
  File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
  File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
  File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 850, in exec_module
  File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
  File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23, in <module>
    from ._surface import subdivide_triangles, vertex_areas
ImportError: libGLU.so.1: cannot open shared object file: No such file or directory

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-ChimeraX/lib/python3.9/site-packages/chimerax/core/toolshed/info.py", line 359, in initialize
    api = self._get_api(session.logger)
  File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-ChimeraX/lib/python3.9/site-packages/chimerax/core/toolshed/info.py", line 503, in _get_api
    m = self.get_module()
  File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-ChimeraX/lib/python3.9/site-packages/chimerax/core/toolshed/info.py", line 486, in get_module
    raise ToolshedError("Error importing bundle %s's module: %s" % (self.name, str(e)))
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-Surface's module: libGLU.so.1: cannot open shared object file: No such file or directory

ERROR: Bundle 'ChimeraX-Surface' custom initialization failed
^C


Log:
Startup Errors  
---  
error | Bundle 'ChimeraX-Surface' custom initialization failed  
warning | Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/toolshed/info.py", line
484, in get_module  
m = importlib.import_module(self.package_name)  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/importlib/__init__.py", line 127, in import_module  
return _bootstrap._gcd_import(name[level:], package, level)  
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import  
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load  
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked  
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked  
File "<frozen importlib._bootstrap_external>", line 850, in exec_module  
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
During handling of the above exception, another exception occurred:  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/toolshed/info.py", line
359, in initialize  
api = self._get_api(session.logger)  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/toolshed/info.py", line
503, in _get_api  
m = self.get_module()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/toolshed/info.py", line
486, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-
Surface's module: libGLU.so.1: cannot open shared object file: No such file or
directory  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  

[a bunch of these deleted]

See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in  
from ._surface import subdivide_triangles, vertex_areas  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139,
in _redraw_timer_callback  
drew = self.draw_new_frame()  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 60, in
draw_new_frame  
from chimerax import surface  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in <module>  
from ._surface import subdivide_triangles, vertex_areas  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
ImportError: libGLU.so.1: cannot open shared object file: No such file or
directory  
  
File "/programs/x86_64-linux/chimerax/1.3/libexec/UCSF-
ChimeraX/lib/python3.9/site-packages/chimerax/surface/__init__.py", line 23,
in




OpenGL version: 4.3 (Core Profile) Mesa 18.3.4
OpenGL renderer: NV117
OpenGL vendor: nouveau
Manufacturer: Dell Inc.
Model: Precision Tower 7910
OS: CentOS Linux 7 Core
Architecture: 64bit ELF
Virutal Machine: none
CPU: 32 Intel(R) Xeon(R) CPU E5-2630 v3 @ 2.40GHz
Cache Size: 20480 KB
Memory:
	              total        used        free      shared  buff/cache   available
	Mem:            62G        1.7G         59G         21M        1.2G         60G
	Swap:           34G          0B         34G

Graphics:
	a1:00.0 VGA compatible controller [0300]: NVIDIA Corporation GM107GL [Quadro K2200] [10de:13ba] (rev a2)	
	Subsystem: NVIDIA Corporation Device [10de:1097]	
	Kernel driver in use: nouveau
Locale: ('en_US', 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2021.10.8
    cftime: 1.5.1.1
    charset-normalizer: 2.0.9
    ChimeraX-AddCharge: 1.2.2
    ChimeraX-AddH: 2.1.11
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.2.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.31
    ChimeraX-AtomicLibrary: 4.2
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.0
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.6.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.2
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.2
    ChimeraX-Clipper: 0.17.0
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5
    ChimeraX-CommandLine: 1.1.5
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.3
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.5
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.2
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1
    ChimeraX-LinuxSupport: 1.0
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.4
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.4
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.4
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.2.6
    ChimeraX-ModelPanel: 1.2.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.7
    ChimeraX-PDB: 2.6.5
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.4.6
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.6.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.13.7
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0.1
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    cxservices: 1.1
    cycler: 0.11.0
    Cython: 0.29.24
    decorator: 5.1.0
    distro: 1.6.0
    docutils: 0.17.1
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 3.6.0
    html2text: 2020.1.16
    idna: 3.3
    ihm: 0.21
    imagecodecs: 2021.4.28
    imagesize: 1.3.0
    ipykernel: 5.5.5
    ipython: 7.23.1
    ipython-genutils: 0.2.0
    jedi: 0.18.0
    Jinja2: 3.0.1
    jupyter-client: 6.1.12
    jupyter-core: 4.9.1
    kiwisolver: 1.3.2
    line-profiler: 3.3.0
    lxml: 4.6.3
    lz4: 3.1.3
    MarkupSafe: 2.0.1
    matplotlib: 3.4.3
    matplotlib-inline: 0.1.3
    msgpack: 1.0.2
    netCDF4: 1.5.7
    networkx: 2.6.3
    numexpr: 2.8.0
    numpy: 1.21.2
    openvr: 1.16.801
    packaging: 21.3
    ParmEd: 3.2.0
    parso: 0.8.3
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 8.3.2
    pip: 21.2.4
    pkginfo: 1.7.1
    prompt-toolkit: 3.0.23
    psutil: 5.8.0
    ptyprocess: 0.7.0
    pycollada: 0.7.1
    pydicom: 2.1.2
    Pygments: 2.10.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.6
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.2
    pytz: 2021.3
    pyzmq: 22.3.0
    qtconsole: 5.1.1
    QtPy: 1.11.3
    RandomWords: 0.3.0
    requests: 2.26.0
    scipy: 1.7.1
    setuptools: 57.5.0
    sfftk-rw: 0.7.1
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 4.2.0
    sphinx-autodoc-typehints: 1.12.0
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2021.4.8
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.1.1
    urllib3: 1.26.7
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.37.0
    wheel-filename: 1.3.0

Change History (9)

comment:1 by Eric Pettersen, 3 years ago

Cc: Tom Goddard Zach Pearson added
Component: Unassigned → Platform
Description: modified (diff)
Owner: set to Greg Couch
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → ImportError: libGLU.so.1: cannot open shared object file: No such file or directory

comment:2 by Zach Pearson, 3 years ago

A similar issue on the Matlab forums, wherein Matlab cannot find libGLU on RHEL/CentOS7, recommends installing the mesa-libglu package. Do you have that package installed?

in reply to:  3 ; comment:3 by Shijian_Zhang@…, 3 years ago 

Thanks for your quick reply but I don’t have the library.

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comment:4 by Zach Pearson, 3 years ago

If you don't have that package installed, then it's a good place to start. Can you try installing mesa-libglu and let us know if it works for you?

comment:5 by Greg Couch, 3 years ago

Resolution: → limitation
Status: assigned → closed

You are running CentOS 7. My guess is that you tried to install the generic version of ChimeraX and it didn't work. Is that correct? CentOS 7 is too old to run the current version of ChimeraX. The last version of ChimeraX that worked on CentOS 7 was version 1.3. And when you install the rpm, it will install the prerequisites, like libGLU. Another problem you have is that your system is using the open source version of the Nvidia graphics driver. You need to install the proprietary Nvidia driver. See ​https://www.cgl.ucsf.edu/chimerax/issues.html#linux_graphics.

I strongly recommend that you update the operating system to one that is compatible with RHEL 8 or 9 instead of RHEL 7, so you can run the current version of ChimeraX.

Last edited 3 years ago by Greg Couch (previous) (diff)

in reply to:  6 ; comment:6 by Shijian_Zhang@…, 3 years ago 

I was tied up with other stuff and will try next week and let you know. Thanks.

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in reply to:  7 ; comment:7 by Shijian_Zhang@…, 3 years ago 

Thanks I will try centos 8 is it ok as well? 

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comment:8 by Greg Couch, 3 years ago

So CentOS 8 is no more. The equivalent would be Rocky 8 or AlmaLinux 8. Both of those are based on RHEL 8 like CentOS 8 was. If you install ChimeraX using the CentOS 8 rpm, you will get all of the prerequisites. And don't forget to install Nvidia's graphics driver.

in reply to:  9 ; comment:9 by Shijian_Zhang@…, 3 years ago 

thanks a lot.

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