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Opened 3 years ago
Closed 3 years ago
#8111 closed defect (fixed)
AlphaFold prediction broken with energy minimization or pdb templates
| Reported by: | Tom Goddard | Owned by: | Tom Goddard |
|---|---|---|---|
| Priority: | moderate | Milestone: | |
| Component: | Structure Prediction | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
Google Colab update from python 3.7 to 3.8 breaking ChimeraX AlphaFold prediction when use energy minimization or use pdb templates are enabled since those explicitly installed OpenMM for 3.7 and hhsuite for 3.7.
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Fixed.
Updated ChimeraX colabfold script to install dependencies for python version being used. Older ChimeraX versions all get this fix since the script is copied from github for every prediction.