Opened 3 years ago
Closed 3 years ago
#7301 closed defect (duplicate)
Freeze on Ubuntu 22.04 + registration date/time error
| Reported by: | Owned by: | Greg Couch | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Platform | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
Hi
I've installed chim after updating ubunut to 22.04 nad got this error
Chim windows appears but it is freezed.
=================================================================================================================
(base) fhoh@fhoh-Precision-Tower-7810:~$ chim
WARNING: Traceback (most recent call last):
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/registration/nag.py",
line 278, in _strptime
month = _months.index(month_name)
ValueError: tuple.index(x): x not in tuple
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/registration/nag.py",
line 289, in _strptime
return datetime.strptime(TimeFormat, value)
File "/usr/lib/ucsf-chimerax/lib/python3.9/_strptime.py", line 568, in
_strptime_datetime
tt, fraction, gmtoff_fraction = _strptime(data_string, format)
File "/usr/lib/ucsf-chimerax/lib/python3.9/_strptime.py", line 349, in
_strptime
raise ValueError("time data %r does not match format %r" %
ValueError: time data '%a %b %d %H:%M:%S %Y' does not match format 'lun.
oct. 14 16:11:34 2019'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/toolshed/info.py",
line 365, in initialize
api._api_caller.initialize(api, session, self)
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/toolshed/__init__.py",
line 1278, in initialize
return cls._get_func(api, "initialize")(session, bi)
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/registration/__init__.py",
line 41, in initialize
nag(session)
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/registration/nag.py",
line 38, in nag
_check_usage(session)
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/registration/nag.py",
line 192, in _check_usage
usage = _get_usage()
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/registration/nag.py",
line 240, in _get_usage
usage["dates"].append(_strptime(value))
File
"/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/registration/nag.py",
line 291, in _strptime
raise ValueError("time data does not match format")
ValueError: time data does not match format
ERROR: Bundle 'ChimeraX-Registration' custom initialization failed
=========================================================================================================================
I tried to find by myself without succes
Thank's
FH
--
________________________________________
Hoh François, PhD
Research Engineer
Team BSME: Biologie structurale multi-échelles
Centre de biochimie Structurale de Montpellier
CNRS UMR 5048 - UM - INSERM U 1054
29 rue de Navacelles
34090 MONTPELLIER Cedex - FRANCE
http://www.cbs.cnrs.fr
Tel: (33) 04 67 41 77 29
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Attachments (2)
Change History (12)
comment:1 by , 3 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Platform |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | bug → Freeze on Ubuntu 22.04 + registration date/time error |
comment:2 by , 3 years ago
| Status: | assigned → feedback |
|---|
follow-up: 3 comment:3 by , 3 years ago
Hi Greg Thank's for those info's I'll try asap (I'm out for the moment) Let you know FH ________________________________________ Hoh François, PhD Research Engineer Team BSME: Biologie structurale multi-échelles Centre de biochimie Structurale de Montpellier CNRS UMR 5048 - UM - INSERM U 1054 29 rue de Navacelles 34090 MONTPELLIER Cedex - FRANCE http://www.cbs.cnrs.fr Tel: (33) 04 67 41 77 29
follow-up: 4 comment:4 by , 3 years ago
comment:5 by , 3 years ago
Maybe the hang is related to auto-starting the side view tool. You could try starting ChimeraX with no autostarted tools chimerax --notools
follow-up: 5 comment:6 by , 3 years ago
Hi Tom With this command , I have chimX window but empty and same behaviour (freezing) Thank's FH
follow-up: 6 comment:7 by , 3 years ago
To help us figure out were ChimeraX is hanging, start ChimeraX from a terminal window. Then, when it hangs, type C (Control-C) to get a backtrace. And send us the output in the terminal (cut & paste, not a screenshot). And since weird bugs are sometimes due to buggy graphics drivers, please send us the output from the command "lspci | grep VGA".
After that:
(1) If you have NVidia graphics, make sure you have the proprietary driver installed. If you install it, reboot, and test again.
(2) This is drastic, but might be needed. Remove all of your customizations and settings with:
rm -rf ~/.config/ChimeraX ~/.cache/ChimeraX ~/.local/share/ChimeraX
And test again.
And if none of that works, we'll need to schedule a zoom meeting using that computer so we can interactively debug it. Bon chance.
comment:9 by , 3 years ago
Hi I've checked all points and no change. Still freezing FH ________________________________________ Hoh François, PhD Research Engineer Team BSME: Biologie structurale multi-échelles Centre de biochimie Structurale de Montpellier CNRS UMR 5048 - UM - INSERM U 1054 29 rue de Navacelles 34090 MONTPELLIER Cedex - FRANCE http://www.cbs.cnrs.fr Tel: (33) 04 67 41 77 29
Salut François,
Thank you for the bug report. This bug should only happen if started using ChimeraX before version 1.2 and you changed the locale (default language) of your computer since then. To help me reproduce this bug, please send us the output of the locale command and the contents of ~/.local/share/ChimeraX/preregistration.
The fix to remove ~/.local/share/ChimeraX/preregistration. That will reset the clock for when ChimeraX nags you to register, which should be okay.