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Sep 17, 2024:

4:58 PM Ticket #15958 (Segmentations: self.view.drawing.parent is None) created by chimerax-bug-report@…: […]
4:58 PM Ticket #15957 (Segmentations: self.view.drawing.parent is None) created by chimerax-bug-report@…: […]
2:58 PM Dev2024-9-23 created by Tom Goddard
2:55 PM 2024-9-19 created by Tom Goddard
2:54 PM DeveloperMeetings edited by Tom Goddard: (diff)
2:04 PM Ticket #15956 (ViewDockX: cannot convert float infinity to integer) created by asadi1@…: […]
1:39 PM ChangeLog edited by Elaine Meng: (diff)
11:18 AM Ticket #15954 (Altloc change doesn't update ribbon) closed by pett: fixed: Fix: …
10:18 AM Ticket #15953 (Keyboard interrupt during restoration of map data) closed by Tom Goddard: can't reproduce: User typed ctrl-C at shell where ChimeraX was run on Linux during a …
9:25 AM Ticket #15955 (H-bonds: acc_phi_psi() number of arguments) closed by pett: not a bug: Hi Heather, This problem typically occurs when the bond connectivity …
8:59 AM Ticket #15955 (H-bonds: acc_phi_psi() number of arguments) created by heather.noriega@…: […]
7:35 AM Ticket #15954 (Altloc change doesn't update ribbon) created by Tristan Croll: […]
5:37 AM Ticket #15953 (Keyboard interrupt during restoration of map data) created by chimerax-bug-report@…: […]
3:53 AM Ticket #15952 (Blast results tool_window is None) created by chimerax-bug-report@…: […]

Sep 16, 2024:

4:33 PM Ticket #9404 ('center' arg when opening small molecules) closed by pett: fixed: Okay, there is now a generic 'center' arg to the open command that …
3:49 PM Dev2024-9-16 edited by Tom Goddard: (diff)
2:53 PM Dev2024-9-16 edited by Tom Goddard: (diff)
10:58 AM Ticket #15951 (Cannot create temp save file) closed by pett: can't reproduce
10:37 AM Ticket #15950 (Crash in event loop) closed by pett: can't reproduce
6:50 AM Ticket #15951 (Cannot create temp save file) created by chimerax-bug-report@…: […]
4:35 AM Ticket #15950 (Crash in event loop) created by chimerax-bug-report@…: […]

Sep 13, 2024:

5:56 PM Dev2024-9-16 edited by pett: (diff)
5:49 PM ChangeLog edited by Elaine Meng: (diff)
12:22 PM Ticket #15949 (Add molmap option to create a cube shaped map) closed by Tom Goddard: fixed: Done. Added "cube" option to molmap command (default false). If cube …
11:16 AM Ticket #15949 (Add molmap option to create a cube shaped map) created by olibclarke@…: From: Oliver Clarke via ChimeraX-users Subject: [chimerax-users] …
11:02 AM Ticket #15948 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 crash in _NSViewHierarchyDidChangeBackingProperties. …
11:01 AM Ticket #15947 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 crash in displayConfigFinalizedProc. Probably connecting …
11:00 AM Ticket #15945 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 crash in displayConfigFinalizedProc. Probably connecting …
10:58 AM Ticket #15943 (Graphics crash, macOS 14.6.1, Intel Iris Plus Graphics) closed by Tom Goddard: nonchimerax: Crash in Apple Intel graphics driver. Unfortunately Apple's OpenGL …
10:44 AM Ticket #15937 (Generated CRYST1 record mis-formatted) closed by pett: nonchimerax
10:40 AM Dev2024-9-16 edited by pett: (diff)
10:40 AM Dev2024-9-16 edited by pett: (diff)
9:11 AM Ticket #15941 (Crash reading mmCIF) closed by pett: can't reproduce
9:09 AM Ticket #15940 (QObject::~QObject: Timers cannot be stopped from another thread) closed by pett: can't reproduce: Crash was in 1.8, and hard to say what the cause is without knowing …
7:36 AM Ticket #15948 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
1:21 AM Ticket #15947 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]

Sep 12, 2024:

8:41 PM Ticket #15946 (CCP4MTZfile: open_read - File missing or corrupted) created by chimerax-bug-report@…: […]
5:36 PM Ticket #15945 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
4:19 PM Ticket #15930 (Tutorial sample code unavailable) closed by pett: fixed: The script needed to set the HOME environment variable and flush the …
3:56 PM Ticket #15899 (Hidden vertices in GLB output, and GLB nodes not centered at (0,0,0)) closed by Tom Goddard: fixed: Fixed. Elaine could you document the new save gltf option …
3:02 PM Ticket #15944 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by chimerax-bug-report@…: […]
2:03 PM Ticket #15943 (Graphics crash, macOS 14.6.1, Intel Iris Plus Graphics) created by benjamin.buchmuller@…: […]
1:32 PM Ticket #15942 (Restore session: LZ4F_decompress failed with code: ...) created by marcell.zimanyi@…: […]
11:44 AM 2024-9-12 edited by Tom Goddard: (diff)
11:29 AM Ticket #15941 (Crash reading mmCIF) created by chimerax-bug-report@…: […]
11:11 AM Ticket #15940 (QObject::~QObject: Timers cannot be stopped from another thread) created by chimerax-bug-report@…: […]
11:05 AM Ticket #15935 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Crash in Mac Qt 6.6 in _NSViewHierarchyDidChangeBackingProperties. …
11:03 AM Ticket #15931 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Crash in Mac Qt 6.6 in displayConfigFinalizedProc. Probably …
10:32 AM Ticket #15938 (Crash in Modeller tool _update_sequence_menus in Qt call ...) closed by pett: duplicate: Duplicate of #15753
10:24 AM Ticket #15936 (Crash using File→Open dialog on Windows and/or returning from function) closed by pett: can't reproduce
10:21 AM Ticket #15933 (Crash in garbage collection) closed by pett: duplicate
10:20 AM Ticket #15932 (UnicodeDecodeError reading PDB file) closed by pett: can't reproduce: Would need the PDB in order to work on this.
9:04 AM Ticket #15939 (SEQCROW: reading .log: list index out of range) created by chimerax-bug-report@…: […]
8:51 AM Ticket #15938 (Crash in Modeller tool _update_sequence_menus in Qt call ...) created by chimerax-bug-report@…: […]
5:22 AM Ticket #15937 (Generated CRYST1 record mis-formatted) created by Tristan Croll: […] 5ewj_ab.pdb
5:21 AM Ticket #15936 (Crash using File→Open dialog on Windows and/or returning from function) created by chimerax-bug-report@…: […]
4:34 AM Ticket #15935 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]

Sep 11, 2024:

6:36 PM Ticket #15934 (Saved GLTF is shifted relative to original model position) closed by Tom Goddard: fixed: Fixed. The ChimeraX position matrix was being applied both to the …
5:29 PM Ticket #15934 (Saved GLTF is shifted relative to original model position) created by goddard@…: […]
4:24 PM Ticket #10356 (DICOM: bits_allocated is None) closed by Zach Pearson: can't reproduce: User never attached their files for testing
3:33 PM Ticket #15926 (BLAST web service is not returning results) closed by Zach Pearson: fixed: The workers died; I restarted them. We've got to figure out how they …
2:54 PM Ticket #15918 (ChimeraX 1.8 on macOS Sequoia) closed by Tom Goddard: not a bug
12:26 PM Ticket #15933 (Crash in garbage collection) created by chimerax-bug-report@…: […]
12:20 PM Ticket #15932 (UnicodeDecodeError reading PDB file) created by chimerax-bug-report@…: […]
11:43 AM Ticket #15931 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
11:23 AM Ticket #15928 (Crash in Modeller tool _update_sequence_menus in Qt call ...) closed by pett: duplicate: Duplicate of #15753
11:12 AM Ticket #15897 (Core include files not found) reopened by pett
9:55 AM Ticket #15930 (Tutorial sample code unavailable) created by simon.duerr@…: Dear Chimera Developers, it seems the example source code download …
5:10 AM Ticket #15929 (Flatpak as extension-building platform) created by Tristan Croll: […]
4:10 AM Ticket #15928 (Crash in Modeller tool _update_sequence_menus in Qt call ...) created by chimerax-bug-report@…: […]
1:26 AM Ticket #15927 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by chimerax-bug-report@…: […]

Sep 10, 2024:

6:55 PM Ticket #15926 (BLAST web service is not returning results) created by goddard@…: […]
4:24 PM Ticket #15925 (Crash in CrBrowserMain) closed by pett: can't reproduce
3:07 PM Ticket #15925 (Crash in CrBrowserMain) created by chimerax-bug-report@…: […]
2:47 PM Ticket #15924 (Internal Server Error contacting toolshed) created by chimerax-bug-report@…: […]
2:31 PM Ticket #15923 (volume splitbyzone: ArrayMemoryError) closed by Tom Goddard: limitation: Ran out of memory making copies of a 520 by 520 by 520 map splitting …
2:24 PM Ticket #15922 (Error contacting the toolshed at startup?) closed by pett: can't reproduce: It would be nice if the service being accessed were identified …
1:49 PM Ticket #15923 (volume splitbyzone: ArrayMemoryError) created by chimerax-bug-report@…: […]
1:46 PM Ticket #15922 (Error contacting the toolshed at startup?) created by chimerax-bug-report@…: […]
11:57 AM Ticket #15920 (Graphics crash, macOS 14.6.1, Intel Iris Plus Graphics 655) closed by Tom Goddard: nonchimerax: Apple Intel graphics driver crash.
11:54 AM Dev2024-9-16 created by Tom Goddard
11:54 AM 2024-9-12 created by Tom Goddard
11:52 AM DeveloperMeetings edited by Tom Goddard: (diff)
11:17 AM Ticket #15917 (Crash in glBufferSubData after "volume level") closed by Tom Goddard: duplicate: Crash in Apple's graphics driver showing large map, M2 Max GPU. I …
11:13 AM Ticket #15919 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Qt 6.6 crash in displayConfigFinalizedProc, either from connecting or …
10:35 AM Ticket #15916 (sym: tuple index out of range) closed by Tom Goddard: fixed: Your sym command that produces the error has the wrong syntax sym …
8:37 AM Ticket #15921 (Could not instantiate StructureSeq.structure) created by jacques.van-Helden@…: […]
7:31 AM Ticket #15920 (Graphics crash, macOS 14.6.1, Intel Iris Plus Graphics 655) created by chimerax-bug-report@…: […]
7:14 AM Ticket #15919 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
6:03 AM Ticket #15918 (ChimeraX 1.8 on macOS Sequoia) created by Jordan.Ladley@…: […] [[Image(...)]] [[Image(...)]] …

Sep 9, 2024:

10:02 PM Ticket #15917 (Crash in glBufferSubData after "volume level") created by csun@…: […]
5:43 PM Ticket #15916 (sym: tuple index out of range) created by pmcarlton@…: […]
4:44 PM Ticket #15897 (Core include files not found) closed by Zach Pearson: not a bug: You specify your core dependency with ~=1.8.0. ~= in PEP440 is the …
4:39 PM Ticket #5952 (Render By Attribute tool) closed by pett: fixed: Added last missing features of the tool (linear vs. logarithmic …
4:09 PM Dev2024-9-9 edited by Tom Goddard: (diff)
2:23 PM Ticket #15906 (ui view fourup: ZeroDivisionError) closed by Zach Pearson: duplicate: Should be fixed in any recent daily build.
2:02 PM Ticket #15915 (GL.glClear: access violation) closed by Tom Goddard: can't reproduce: Probably graphics driver problem. Error in glClear() drawing status …
2:00 PM Dev2024-9-9 edited by Zach Pearson: (diff)
1:57 PM Ticket #15914 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Qt 6.6 crash in displayConfigFinalizedProc() either connecting or …
1:52 PM Ticket #15913 (Update atomic bundle) closed by pett: not a bug: Hi Chen, The Atomic bundle is shipped as part of the ChimeraX app, so …
12:50 PM Ticket #15915 (GL.glClear: access violation) created by chimerax-bug-report@…: […]
12:12 PM Ticket #15910 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Unfortunately a bug in the Qt window toolkit used by ChimeraX …
12:11 PM Ticket #15912 (Generic chooser widget: argument of type 'NoneType' is not iterable) closed by pett: duplicate: Hi Baturay, Thanks for reporting this problem. It was fixed in the …
12:09 PM Ticket #15909 (Graphics crash, macOS 13.6.1, Intel Iris Plus Graphics) closed by Tom Goddard: nonchimerax: Apple Intel graphics driver crash.
12:07 PM Ticket #15905 (Crash in glBufferSubData) closed by Tom Goddard: duplicate: Same problem as your previous crash (#15903), Mac graphics driver …
12:01 PM Ticket #15903 (Crash in glBufferSubData) closed by Tom Goddard: nonchimerax: ChimeraX crashed in the Mac OpenGL driver in gldBufferSubData(). I …
11:52 AM Ticket #15902 (glDrawBuffer: invalid operation) closed by Tom Goddard: duplicate: Never figured this OpenGL but out, only happens on Linux. Possibly …
11:51 AM Ticket #15901 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Unfortunately a bug in the Qt window toolkit used by ChimeraX …
11:39 AM Ticket #15914 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
11:30 AM Ticket #15908 (No error reported) closed by pett: not a bug
11:29 AM Ticket #15907 (No error reported) closed by pett: not a bug
11:16 AM Ticket #15900 (colored stl file for 3d printing) closed by pett: duplicate: Asked and answered on the chimerax-users list
10:38 AM Ticket #15913 (Update atomic bundle) created by w.chen@…: […]
4:52 AM Ticket #15912 (Generic chooser widget: argument of type 'NoneType' is not iterable) created by batu8991@…: […]
2:42 AM Ticket #15911 (Color-picker text fields truncated on Windows) created by Tristan Croll: […] Screenshot 2024-09-09 103941.png
12:48 AM Ticket #15910 (Crash on Mac waking from sleep) created by sandelpi@…: […]

Sep 8, 2024:

7:50 PM Ticket #15909 (Graphics crash, macOS 13.6.1, Intel Iris Plus Graphics) created by chimerax-bug-report@…: […]
7:07 PM Ticket #15908 (No error reported) created by chimerax-bug-report@…: […]
7:07 PM Ticket #15907 (No error reported) created by chimerax-bug-report@…: […]
12:29 AM Ticket #10035 (Add tests to DICOM) closed by Zach Pearson: fixed: Added tests for opening DICOM files in …

Sep 7, 2024:

10:19 PM Ticket #15906 (ui view fourup: ZeroDivisionError) created by chimerax-bug-report@…: […]
4:46 PM Ticket #15905 (Crash in glBufferSubData) created by csun@…: […]
1:38 PM Ticket #15904 (UV/Vis Spectrum: list index out of range) created by howell.t@…: […]
10:35 AM Ticket #15903 (Crash in glBufferSubData) created by csun@…: […]
7:04 AM Ticket #15902 (glDrawBuffer: invalid operation) created by chimerax-bug-report@…: […]

Sep 6, 2024:

10:13 PM Ticket #15901 (Crash on Mac waking from sleep) created by bburendei@…: […]
3:01 PM Ticket #15900 (colored stl file for 3d printing) created by hwitwit@…: […] [[Image(...)]]
12:04 PM Ticket #15899 (Hidden vertices in GLB output, and GLB nodes not centered at (0,0,0)) created by kristen.browne@…: […] output.png
11:59 AM Ticket #15898 (Crash handling window screen change) closed by Tom Goddard: duplicate: The Mac Qt 6.6 window toolkit crashed in …
11:55 AM Ticket #15896 (Crash drawing scene) closed by Tom Goddard: nonchimerax: Graphics driver crash, Linux OpenGL version: 4.3 (Core Profile) Mesa …
11:52 AM Ticket #15894 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 crash configuring displays in displayConfigFinalizedProc.
11:50 AM Ticket #15890 (Framebuffer image capture creation failed) closed by Tom Goddard: nonchimerax: Qt errors due to broken Nvidia graphics driver on Linux.
11:48 AM Ticket #15888 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 crash in _NSViewHierarchyDidChangeBackingProperties.
10:42 AM Ticket #15898 (Crash handling window screen change) created by gkaur1@…: […]
10:32 AM Ticket #15895 (Crash in QWebEngine backend) closed by pett: can't reproduce
9:23 AM Ticket #15892 (Crash using open/save dialog) closed by pett: can't reproduce
9:19 AM Ticket #15891 (Crash using open/save dialog) closed by pett: can't reproduce
9:07 AM Ticket #15886 (PDB/PSF) closed by pett: not a bug: Hi Miguel, A PSF file describes the atoms and connectivity of a …
7:32 AM Ticket #15897 (Core include files not found) created by Tristan Croll: […]
6:23 AM Ticket #15896 (Crash drawing scene) created by chimerax-bug-report@…: […]
5:37 AM Ticket #15895 (Crash in QWebEngine backend) created by chimerax-bug-report@…: […]
3:25 AM Ticket #15894 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
1:33 AM Ticket #15893 (Open session: is_gzip_file: Operation timed out) created by chimerax-bug-report@…: […]
12:05 AM Ticket #15892 (Crash using open/save dialog) created by chimerax-bug-report@…: […]
12:04 AM Ticket #15891 (Crash using open/save dialog) created by chimerax-bug-report@…: […]

Sep 5, 2024:

10:18 PM Ticket #15890 (Framebuffer image capture creation failed) created by chimerax-bug-report@…: […]
5:42 PM Ticket #15889 (ISOLDE: wrapped C/C++ object of type QToolButton has been deleted) created by rsr2169@…: […]
2:16 PM 2024-9-5 edited by Tom Goddard: (diff)
1:46 PM Ticket #15888 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
1:20 PM Ticket #15887 (Can't get it to load) created by taylorjo@…: […]
1:01 PM Ticket #15885 (Graphics crash, macOS 14.1.1, Intel Iris Plus Graphics) closed by Tom Goddard: nonchimerax: Apple Intel graphics driver crash.
12:42 PM Ticket #15886 (PDB/PSF) created by mpedraza@…: […]
10:37 AM Ticket #15884 (label monitoring: 'Changes' object has no attribute ...) closed by pett: duplicate: Duplicate of #15177
10:34 AM Ticket #15883 (Crash drawing ribbons) closed by pett: duplicate
10:34 AM Ticket #15882 (Crash drawing ribbons) closed by pett: duplicate: Basically a duplicate of #15880
9:02 AM Ticket #15881 (Crash drawing ribbons) closed by pett: duplicate: Duplicate of #15880, but with a more complete log (but still some …
8:59 AM Ticket #15880 (Crash drawing ribbons) closed by pett: can't reproduce: Log obviously incomplete; was accessing some atomic property when the …
8:55 AM Ticket #15879 (Unknown problem) closed by pett: can't reproduce
6:15 AM Ticket #15885 (Graphics crash, macOS 14.1.1, Intel Iris Plus Graphics) created by chimerax-bug-report@…: […]
4:21 AM Ticket #15884 (label monitoring: 'Changes' object has no attribute ...) created by chimerax-bug-report@…: […]

Sep 4, 2024:

9:03 PM Ticket #15883 (Crash drawing ribbons) created by chimerax-bug-report@…: […]
9:00 PM Ticket #15882 (Crash drawing ribbons) created by chimerax-bug-report@…: […]
8:58 PM Ticket #15881 (Crash drawing ribbons) created by chimerax-bug-report@…: […]
8:55 PM Ticket #15880 (Crash drawing ribbons) created by chimerax-bug-report@…: […]
7:00 PM Ticket #15879 (Unknown problem) created by chimerax-bug-report@…: […]
3:52 PM Ticket #15875 (Graphics crash, macOS 14.5, Mac M1 Max GPU) closed by Tom Goddard: nonchimerax: While this is reproducible it seems almost certainly a graphics driver …
12:24 PM Ticket #15874 (Graphics crash, macOS 14.5, M1 GPU) closed by Tom Goddard: can't reproduce: Crashed on OpenGL glBufferData(). User was showing large maps 1280 x …
11:45 AM Ticket #15876 (Dock Prep: wrapped C/C++ object of type ShortASList has been deleted) closed by pett: can't reproduce
11:31 AM Ticket #15857 (Index out of range updating header sequence) closed by pett: fixed: Fix in tomorrow's daily build. Fix: …
9:24 AM Ticket #15878 (Crash during window close) closed by pett: can't reproduce
9:04 AM Ticket #15878 (Crash during window close) created by chimerax-bug-report@…: […]
2:05 AM Ticket #15877 (Graphics crash, macOS 14.5, Mac M1 Max) created by chimerax-bug-report@…: […]
1:44 AM Ticket #15876 (Dock Prep: wrapped C/C++ object of type ShortASList has been deleted) created by chimerax-bug-report@…: […] UF_058_XP_037525416.1-AF-A0A131YF69-F1-model_v4.pdb
1:18 AM Ticket #15875 (Graphics crash, macOS 14.5, Mac M1 Max GPU) created by chimerax-bug-report@…: […]

Sep 3, 2024:

2:39 PM Ticket #15872 (Color zone "far color" arg problem) closed by Tom Goddard: fixed: Fixed in daily builds Sept 3, 2024 or newer. The farColor option …
2:19 PM Ticket #15863 (Session restore: No module named 'lz4._version') closed by Greg Couch: can't reproduce: Perhaps the installation is corrupted, or a third party package or …
2:01 PM Ticket #15874 (Graphics crash, macOS 14.5, M1 GPU) created by chimerax-bug-report@…: […]
1:26 PM Ticket #15873 (SEQCROW: index out of bounds showing orbitals) created by mateuspaiao159@…: […] ERRADO.out
1:09 PM Ticket #15872 (Color zone "far color" arg problem) created by rposert@…: […]
12:50 PM Ticket #15871 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Unfortunately Qt window toolkit version 6.6 that ChimeraX 1.8 uses …
12:47 PM Ticket #15870 (glTexImage2D: out of memory) closed by Tom Goddard: can't reproduce: The first glTexImage2D() call that failed with "out of memory" was …
12:05 PM Ticket #15865 (Deprotonated CYS) closed by pett: limitation: Hi Tristan, ChimeraX's atom typing only considers bonded connectivity …
11:53 AM Ticket #15864 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt bug, crashing in _NSViewHierarchyDidChangeBackingProperties, on …
11:52 AM Ticket #15859 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt bug, crashing in _NSViewHierarchyDidChangeBackingProperties, on …
11:52 AM Ticket #15858 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt bug, crashing in _NSViewHierarchyDidChangeBackingProperties, on …
11:50 AM Dev2024-9-9 created by Tom Goddard
11:49 AM 2024-9-5 created by Tom Goddard
11:48 AM DeveloperMeetings edited by Tom Goddard: (diff)
9:23 AM Ticket #15868 (Alphafold interfaces: PAE not opened) closed by pett: duplicate: Duplicate of #15869
9:20 AM Ticket #15867 (Crash in garbage collection) closed by pett: duplicate: Hi Zeba, Thanks for reporting this problem. The garbage-collection …
9:16 AM Ticket #15871 (Crash on Mac waking from sleep) created by gkaur1@…: […]
9:05 AM Ticket #15861 (MemoryError opening mmCIF files) closed by pett: duplicate
9:03 AM Ticket #15860 (A destroyed ToolWindow got a KeyPressEvent) closed by pett: can't reproduce
5:15 AM Ticket #15870 (glTexImage2D: out of memory) created by chimerax-bug-report@…: […]
4:17 AM Ticket #15869 (Alphafold interfaces: PAE not opened) created by bruno.haymele@…: […] 2024-09-03-131111_1917x1055_scrot.png
4:05 AM Ticket #15868 (Alphafold interfaces: PAE not opened) created by bruno.haymele@…: […]

Sep 2, 2024:

11:34 PM Ticket #15867 (Crash in garbage collection) created by zrizvi@…: […]
9:32 AM Ticket #15866 (Clipper: density sphere not aligned with structure) created by jingjin.fan@…: […]
7:01 AM Ticket #15865 (Deprotonated CYS) created by Tristan Croll: […] 2zpa_rebuilt.cif
4:06 AM Ticket #15864 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
2:09 AM Ticket #15863 (Session restore: No module named 'lz4._version') created by chimerax-bug-report@…: […]

Sep 1, 2024:

7:34 PM Ticket #15862 (ISOLDE: too many hydrogens for SER) created by n.aleksandrova@…: […] ISOLDErefine3_SepAMono_BugReport.pdb
7:05 AM Ticket #15861 (MemoryError opening mmCIF files) created by chimerax-bug-report@…: […]
6:54 AM Ticket #15860 (A destroyed ToolWindow got a KeyPressEvent) created by chimerax-bug-report@…: […]
6:42 AM Ticket #15859 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]

Aug 31, 2024:

9:52 AM Ticket #15858 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]

Aug 30, 2024:

2:48 PM Ticket #15843 (RFE: xml2toml function in bundle builder) closed by Zach Pearson: fixed: Bundle builder can now perform rudimentary conversion of …
2:32 PM Ticket #15850 (TOML bundle builder doesn't fill out setuptools.packages properly) closed by Zach Pearson: fixed: Should be …
1:45 PM Ticket #15857 (Index out of range updating header sequence) created by jdietrich3@…: […]
1:28 PM Ticket #15854 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 bug, crash in _NSViewHierarchyDidChangeBackingProperties. …
1:15 PM Ticket #15853 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 bug, crash in displayConfigFinalizedProc. Either plugging …
1:13 PM Ticket #15852 (Crash moving window between screens) closed by Tom Goddard: duplicate: Mac Qt 6.6 bug, crash in _NSViewHierarchyDidChangeBackingProperties.
1:12 PM Ticket #15849 (Morph: index out of bounds) closed by Tom Goddard: duplicate: Fixed. Duplicate of #15747, trying to morph using a previous morph.
1:08 PM Ticket #15856 (Opening PAE json file: not AlphaFold predicted aligned error data, ...) closed by Tom Goddard: fixed
1:03 PM Ticket #15856 (Opening PAE json file: not AlphaFold predicted aligned error data, ...) created by goddard@…: […]
11:45 AM Ticket #15855 (QKeyEvent handled as drop) closed by pett: can't reproduce: The type() call on the event returned Drop, despite being a QKeyEvent.
11:07 AM Ticket #15855 (QKeyEvent handled as drop) created by chimerax-bug-report@…: […]
11:01 AM Ticket #15854 (Crash on Mac waking from sleep) created by nferraro@…: […]
9:13 AM Ticket #15853 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
8:54 AM Ticket #15851 (Crash in garbage collection) closed by pett: duplicate
8:41 AM Ticket #15848 (Crash in event loop) closed by pett: can't reproduce: Hi Moon, Thanks for reporting this problem. It's not really clear …
5:17 AM Ticket #15852 (Crash moving window between screens) created by chimerax-bug-report@…: […]
3:35 AM Ticket #15851 (Crash in garbage collection) created by chimerax-bug-report@…: […]
2:16 AM Ticket #15850 (TOML bundle builder doesn't fill out setuptools.packages properly) created by Zach Pearson: When building arrays to double check that bundle builder's new …

Aug 29, 2024:

7:58 PM ChangeLog edited by Elaine Meng: (diff)
7:07 PM Ticket #15849 (Morph: index out of bounds) created by chimerax-bug-report@…: […]
6:53 PM Ticket #15848 (Crash in event loop) created by 745324914@…: […]
6:32 PM Ticket #15847 (Graphics crash, macOS 13.6.9, Intel UHD Graphics 617) closed by Tom Goddard: nonchimerax: Apple Intel graphics driver crash.
4:23 PM Ticket #15840 (addh slow) closed by pett: fixed: Some recent-ish code in Residue.add_atom() to possibly adjust …
4:22 PM Ticket #15847 (Graphics crash, macOS 13.6.9, Intel UHD Graphics 617) created by chimerax-bug-report@…: […]
3:38 PM Ticket #15846 (How can the ChimeraX VR coordinates be aligned for 2-person VR with ...) created by Tom Goddard: In the past a two person VR meeting with both headsets in the same …
3:17 PM Ticket #15844 (RE: Bug and unable to report) closed by Tom Goddard: can't reproduce: I'm not sure what you mean by "ChimeraX -1.8 is unable to show the …
3:13 PM Ticket #15842 (Graphics crash, macOS 14.6.1, Intel Iris Plus Graphics) closed by Tom Goddard: nonchimerax: Apple Intel graphics driver crash.
3:12 PM Ticket #15841 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 crash in _NSViewHierarchyDidChangeBackingProperties, …
3:06 PM Ticket #15845 (Test) closed by pett: not a bug: Testing bug reporting (really website availability)
2:24 PM 2024-8-29 edited by Tom Goddard: (diff)
2:23 PM Ticket #15845 (Test) created by pett: […]
2:18 PM Ticket #15844 (RE: Bug and unable to report) created by w.chen@…: […] [[Image(...)]] [[Image(...)]]
2:07 PM Ticket #15836 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Qt 6.6 bug. Crash in _NSViewHierarchyDidChangeBackingProperties.
1:54 PM NIAID2024 edited by Elaine Meng: (diff)
1:33 PM NIAID2024 edited by Elaine Meng: (diff)
11:12 AM Ticket #15843 (RFE: xml2toml function in bundle builder) created by Zach Pearson: It would be good if bundle builder could use bundle_builder_toml for …
10:52 AM Ticket #15835 (Issue Launching ChimeraX) closed by Tom Goddard: nonchimerax: The ChimeraX crash is very likely caused by your current broken …
10:50 AM Ticket #15839 ('AtomicStructure' object has no attribute '_alt_loc_changes_handler') closed by pett: duplicate
10:48 AM Ticket #15838 ('AtomicStructure' object has no attribute '_alt_loc_changes_handler') closed by pett: duplicate: Hi Jae-Hun, Thanks for reporting this problem. It is fixed in the …
10:45 AM Ticket #15837 ('MarkedHistogram' object has no attribute '_min_val') closed by pett: duplicate: Hi Peter, Thanks for reporting this problem. It has been fixed in …
10:44 AM Ticket #15826 (patchelf not found on certain Linii) closed by Greg Couch: fixed: Zach fixed this.
8:54 AM phenix-8-26-24 edited by pett: (diff)
6:57 AM Ticket #15842 (Graphics crash, macOS 14.6.1, Intel Iris Plus Graphics) created by chimerax-bug-report@…: […]
6:34 AM Ticket #15841 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
4:10 AM Ticket #15840 (addh slow) created by Tristan Croll: […]
12:28 AM Ticket #15839 ('AtomicStructure' object has no attribute '_alt_loc_changes_handler') created by jae-hun.jeoung@…: […]

Aug 28, 2024:

11:29 PM Ticket #15838 ('AtomicStructure' object has no attribute '_alt_loc_changes_handler') created by jae-hun.jeoung@…: […]
4:26 PM Ticket #10036 (Add programming documentation on how to include PyPi dependencies in a ...) closed by pett: fixed: Added an explicit mention of declaring dependencies on PyPi packages …
2:46 PM Ticket #15837 ('MarkedHistogram' object has no attribute '_min_val') created by pngoi@…: […]
1:22 PM Ticket #15836 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
10:56 AM Ticket #15835 (Issue Launching ChimeraX) created by Will.Stritzel@…: […] [[Image(...)]] [[Image(...)]]
9:13 AM Ticket #15834 (Crash in garbage collection) closed by pett: duplicate
9:12 AM Ticket #15833 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) closed by pett: duplicate
7:40 AM Ticket #15834 (Crash in garbage collection) created by chimerax-bug-report@…: […]
12:22 AM Ticket #15833 (Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device ...) created by chimerax-bug-report@…: […]

Aug 27, 2024:

1:06 PM Ticket #15559 (Crash opening mmCIF) closed by Greg Couch: can't reproduce: No response from bug submitter. Need problematic mmCIF file to …
12:38 PM Ticket #15832 (Arg sidechains) created by botosi@…: […]
10:16 AM Ticket #15829 (color radial: ArrayMemoryError) closed by Tom Goddard: limitation: Trying to allocate 233 Mbyte numpy array of 10 million vertex …
10:10 AM Ticket #15827 (Volume Viewer menu) closed by Tom Goddard: not a bug: The Volume Viewer panel does not have menus except for the context …
9:55 AM Dev20249-2 created by Tom Goddard
9:54 AM 2024-8-29 created by Tom Goddard
9:53 AM DeveloperMeetings edited by Tom Goddard: (diff)
9:17 AM Ticket #15830 (Crash in python_instances_of_class) closed by pett: duplicate: Hi Yoan, Thanks for reporting this problem. We believe it is fixed …
6:55 AM Ticket #15831 (SEQCROW: Buried Volume: cannot convert float NaN to integer) created by chimerax-bug-report@…: […]
6:02 AM Ticket #15830 (Crash in python_instances_of_class) created by yoan.duhoo@…: […]
5:13 AM Ticket #15829 (color radial: ArrayMemoryError) created by chimerax-bug-report@…: […]
3:54 AM Ticket #15828 (ISOLDE: addh step of sim start: z_align endpoints must be distinct) created by jingjin.fan@…: […]
12:03 AM Ticket #15827 (Volume Viewer menu) created by jurgen.sygusch@…: […] Volume Viewer_Screenshot 2024-08-27 025252.png

Aug 26, 2024:

4:24 PM Ticket #15826 (patchelf not found on certain Linii) created by pett: Namely on Flatpak and Ubuntu 20.04 -- and it only fails on the …
4:21 PM Ticket #15825 (Add a PDB and AlphaFold database sequence search using RCSB mmseqs2) created by Tom Goddard: It might be useful to add a PDB and AlphaFold database sequence search …
3:59 PM Dev2024-8-26 edited by Tom Goddard: (diff)
2:19 PM phenix-8-26-24 edited by pett: (diff)
2:19 PM phenix-8-26-24 edited by pett: (diff)
2:16 PM phenix-8-26-24 edited by pett: (diff)
2:14 PM phenix-8-26-24 edited by pett: (diff)
2:14 PM phenix-8-26-24 edited by pett: (diff)
1:53 PM Ticket #15824 (Unable to Install Chimerax on Ubuntu 24.04 due to Package Dependencies) created by minamothersole@…: […] Screenshot from 2024-08-26 13-44-53.png
1:38 PM phenix-8-26-24 edited by pett: (diff)
12:10 PM phenix-8-26-24 created by pett
12:10 PM Features edited by pett: (diff)
11:54 AM Ticket #15822 (Map data: invalid value encountered in multiply) closed by Tom Goddard: duplicate: There are two problems here. The "invalid value encountered in …
11:44 AM Ticket #15823 (MemoryError opening mmCIF files) closed by pett: duplicate
11:35 AM Ticket #15821 (Save mmCIF: 'Residue' object has no attribute 'display') closed by pett: duplicate: Hi Disha, Thanks for reporting this problem. It is fixed in the …
11:30 AM Ticket #15820 (Bad silhouette outlines) closed by Tom Goddard: duplicate: This is a bug in Apple's Intel graphics driver specific to your …
11:28 AM Ticket #15818 (Graphics crash, macOS 14.6.1, AMD Radeon Pro 5300M, in OpenMM) closed by Tom Goddard: duplicate: Duplicate of #15817, same reporter.
11:25 AM Ticket #15817 (Graphics crash, macOS 14.6.1, AMD Radeon Pro 5300M, in OpenMM) closed by Tom Goddard: nonchimerax: Crashed in Apple AMD graphics driver using OpenMM with ISOLDE.
11:15 AM Ticket #15819 (No space left on device saving settings) closed by pett: nonchimerax
2:05 AM Ticket #15823 (MemoryError opening mmCIF files) created by chimerax-bug-report@…: […]

Aug 25, 2024:

5:40 AM Ticket #15822 (Map data: invalid value encountered in multiply) created by chimerax-bug-report@…: […]
3:54 AM Ticket #15821 (Save mmCIF: 'Residue' object has no attribute 'display') created by disha-gajanan.hiregange@…: […]

Aug 24, 2024:

5:38 AM Ticket #15820 (Bad silhouette outlines) created by dp5117@…: […] Screenshot 2024-08-12 at 14.15.01.png
3:55 AM Ticket #15819 (No space left on device saving settings) created by chimerax-bug-report@…: […]
2:42 AM Ticket #15818 (Graphics crash, macOS 14.6.1, AMD Radeon Pro 5300M, in OpenMM) created by chimerax-bug-report@…: […]
2:31 AM Ticket #15817 (Graphics crash, macOS 14.6.1, AMD Radeon Pro 5300M, in OpenMM) created by chimerax-bug-report@…: […]

Aug 23, 2024:

11:25 AM Ticket #15815 ('AtomicStructure' object has no attribute '_alt_loc_changes_handler') closed by pett: fixed: Fix: …
10:56 AM Ticket #15816 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Crash connecting or disconnecting an external display or waking from …
7:52 AM Ticket #15816 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]

Aug 22, 2024:

8:37 PM Ticket #15815 ('AtomicStructure' object has no attribute '_alt_loc_changes_handler') created by chimerax-bug-report@…: […]
3:51 PM Ticket #15814 (ToolInstance.bundle_info is None) created by qinli.hu@…: […]
3:45 PM Ticket #15805 (ScholAR: bad function declaration) closed by prottinghuis: fixed: Schol-AR tool will work on ChimeraX versions 1.4+.
3:44 PM Ticket #15724 (ChimeraX installed in non-ASCII path on Windows cannot execute al2co) closed by pett: can't reproduce: This is a Model Archive #5601 type structure apparently, and opening …
3:15 PM Ticket #15812 (AlphaFold Error Plot: listdir: Operation not permitted) closed by Tom Goddard: nonchimerax: ChimeraX did not have permission to list the AlphaFold results …
3:12 PM Ticket #15809 (Crash repositioning window (dual display)) closed by Tom Goddard: duplicate: This crash is due to a bug in the Qt window toolkit used by ChimeraX. …
2:47 PM Ticket #15813 (Wheel not installing out of bundle dist dir) created by Piet Rottinghuis: […] ChimeraX_ScholAR-0.3.3-py3-none-any.whl
2:25 PM Ticket #15812 (AlphaFold Error Plot: listdir: Operation not permitted) created by chimerax-bug-report@…: […]
2:18 PM Ticket #15811 (Session save: No bundle information for chimerax.core.tasks.Tasks) created by chimerax-bug-report@…: […]
2:13 PM Ticket #15479 (Could not save clashes to non-ASCII file path) closed by pett: fixed: Not a non-ASCII problem -- the folder doesn't exist. Now open_output …
12:54 PM Ticket #15810 (RFE: convenient if "color fromatom" could work on atom/residue labels) created by Elaine Meng: As per chimerax-users exchange …
12:53 PM 2024-8-22 edited by Tom Goddard: (diff)
12:44 PM Ticket #15809 (Crash repositioning window (dual display)) created by alex.long@…: […]
12:34 PM Ticket #15808 (JSON from Mol 2.0 desktop version) closed by Tom Goddard: nonchimerax: Your problems are all with getting proper JSON output from MOLE, not …
10:50 AM Ticket #15807 (Graphics crash, macOS 14.5, Intel Iris Plus Graphics) closed by Tom Goddard: nonchimerax: Apple Intel graphics driver crash.
10:12 AM Ticket #15808 (JSON from Mol 2.0 desktop version) created by nkoylas1@…: Hi Elaine, The desktop version provides an XML file. I converted …
10:08 AM Ticket #15806 (testing attachments going to email2trac) closed by pett: not a bug
8:54 AM Ticket #15807 (Graphics crash, macOS 14.5, Intel Iris Plus Graphics) created by chimerax-bug-report@…: […]
8:43 AM Ticket #15806 (testing attachments going to email2trac) created by pett: […] test_image.png
7:31 AM Ticket #15805 (ScholAR: bad function declaration) created by chimerax-bug-report@…: […]
4:09 AM Ticket #15804 (Log cannot restore session state) created by chimerax-bug-report@…: […]

Aug 21, 2024:

5:37 PM Ticket #15803 (Crash in garbage collection) closed by pett: duplicate
4:29 PM Ticket #15797 (alphafold pae file: structure is None) closed by Tom Goddard: fixed: Fixed. I improved the code so it will tell you that you have to open …
1:34 PM Ticket #15803 (Crash in garbage collection) created by chimerax-bug-report@…: […]
1:25 PM Ticket #15802 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: Crash in Qt 6.6 in displayConfigFinalizedProc on Intel Mac with AMD …
1:23 PM Ticket #15799 (Crash on Mac waking from sleep) closed by Tom Goddard: duplicate: This crash is in the Qt 6.6 window toolkit on Mac. We've seen it many …
12:47 PM Ticket #15767 (Fetch IHM entries by 4 character PDB id) closed by Tom Goddard: fixed: Done. The PDB fixed the problem and fetching by 8-digit ids works …
12:23 PM Ticket #15785 (Crash moving window between displays) closed by Tom Goddard: can't reproduce: Mac Qt 6.6 crash in _NSViewHierarchyDidChangeBackingProperties. …
12:20 PM DeveloperMeetings edited by Tom Goddard: (diff)
12:19 PM DeveloperMeetings edited by Tom Goddard: (diff)
12:19 PM Dev2024-8-26 created by Tom Goddard
12:18 PM 2024-8-22 created by Tom Goddard
12:16 PM DeveloperMeetings edited by Tom Goddard: (diff)
12:15 PM DeveloperMeetings edited by Tom Goddard: (diff)
12:14 PM Ticket #15782 (ChimeraX downloads all OneDrive files) closed by Tom Goddard: nonchimerax: ChimeraX is not trying to download any files from a OneDrive folder …
12:08 PM Ticket #15781 (Crash moving window between displays) closed by Tom Goddard: duplicate: Mac Qt 6.6 crash in _NSViewHierarchyDidChangeBackingProperties. Was …
12:05 PM Ticket #15776 (Crash waking Mac up from sleep) closed by Tom Goddard: duplicate: Mac Qt 6.6 bug, crash in _NSViewHierarchyDidChangeBackingProperties. …
12:02 PM Ticket #15774 (MemoryError saving map in session) closed by Tom Goddard: limitation: Out of memory trying to copy a volume to a byte array to output into a …
11:10 AM Ticket #15769 (ArrayMemoryError in volume splitbyzone) closed by Tom Goddard: limitation: Out of memory using volume splitbyzone. Looks like there were less …
9:20 AM Ticket #15798 (Window Device Guard screws everything up) closed by pett: nonchimerax
7:35 AM Ticket #15802 (Crash on Mac waking from sleep) created by chimerax-bug-report@…: […]
5:37 AM Ticket #15801 (XMAS: KeyError uploading DisVis outputs) created by g.picco@…: […]
1:48 AM Ticket #15800 (XMAS: "Integrate" -> "create HADDOCK input" does not respond / crashes) created by g.picco@…: […]

Aug 20, 2024:

11:36 PM Ticket #15799 (Crash on Mac waking from sleep) created by kelvin.lau@…: […]
10:37 PM Ticket #15798 (Window Device Guard screws everything up) created by chimerax-bug-report@…: […]
5:22 PM Ticket #15797 (alphafold pae file: structure is None) created by pmcarlton@…: […] …
3:05 PM Ticket #15796 (CliX error when preferences file missing) created by colingauvin@…: […]
2:02 PM Ticket #15795 (Sequence characters not updated appropriately) created by pett: […]
11:34 AM Ticket #15794 (Crash in event loop) created by dothideomycetes@…: […]
11:24 AM Ticket #15793 (ViewDockX: cannot convert float infinity to integer) closed by pett: fixed: Hi Mojgan, Thanks for reporting this error. I have applied a fix …
10:55 AM Ticket #15790 (Unknown crash) closed by pett: can't reproduce
10:53 AM Ticket #15793 (ViewDockX: cannot convert float infinity to integer) created by asadi1@…: […]
10:41 AM Ticket #15792 (SEQCROW: `y` must contain only finite values) created by neryvillegas@…: […]
10:41 AM Ticket #15791 (SEQCROW: `y` must contain only finite values) created by chimerax-bug-report@…: […]
9:38 AM Ticket #15789 (MemoryError opening mmCIF file) closed by pett: duplicate
9:37 AM Ticket #15788 (pbond adding group to scene twice) closed by pett: duplicate: Duplicate of #15770
9:25 AM Ticket #15787 (All hydrogen names for taken) closed by pett: not a bug: Hi Yue, Thanks for reporting this problem. ChimeraX is not correctly …
9:12 AM Ticket #15786 (KeyError (platform) checking for updates) closed by pett: duplicate: Duplicate of #15775
9:10 AM Ticket #15790 (Unknown crash) created by chimerax-bug-report@…: […]
1:00 AM Ticket #15789 (MemoryError opening mmCIF file) created by chimerax-bug-report@…: […]

Aug 19, 2024:

11:52 PM Ticket #15788 (pbond adding group to scene twice) created by chimerax-bug-report@…: […]
11:52 PM Ticket #15787 (All hydrogen names for taken) created by wangyue1@…: […]
10:34 PM Ticket #15786 (KeyError (platform) checking for updates) created by chimerax-bug-report@…: […]
6:14 PM Ticket #15785 (Crash moving window between displays) created by chimerax-bug-report@…: […]
5:14 PM Ticket #15758 (IndexError showing MatchMaker alignment) closed by pett: fixed: Fix: …
4:59 PM Ticket #15784 (Unresponsive on Ubuntu 20.04) closed by Greg Couch: limitation: Ah ha. You are using the open source NVidia driver. It's slowly …
1:31 PM Ticket #15783 (Open CHARMM .crd file) closed by pett: not a bug: Hi Mitch, As I understand it, CHARMM-GUI prepares the input for …
11:38 AM Ticket #15775 (KeyError (platform) checking for updates) closed by Zach Pearson: fixed: Should be …
11:38 AM Ticket #15784 (Unresponsive on Ubuntu 20.04) created by Dr. Michael F. Schmid <mfschmid@…>: […]
11:31 AM Ticket #15780 (MatchMaker: circular import of _sw) closed by pett: can't reproduce
11:22 AM Ticket #15777 (UnicodeDecodeError reading JSON file) closed by pett: can't reproduce: Would need the file to make progress.
10:30 AM Ticket #15783 (Open CHARMM .crd file) created by alphataubio@…: […] charmm-gui (4).tgz
7:43 AM Ticket #15782 (ChimeraX downloads all OneDrive files) created by dmsmith@…: […]
7:09 AM Ticket #15781 (Crash moving window between displays) created by chimerax-bug-report@…: […]
5:34 AM Ticket #15780 (MatchMaker: circular import of _sw) created by chimerax-bug-report@…: […]
4:52 AM Ticket #15779 (Follow-on error to: 'ClipCap' object has no attribute 'data') created by julia.charl@…: […]
4:51 AM Ticket #15778 (Segmentations: 'ClipCap' object has no attribute 'data') created by julia.charl@…: […]
2:35 AM Ticket #15777 (UnicodeDecodeError reading JSON file) created by chimerax-bug-report@…: […]

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