![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 14 months ago
Closed 14 months ago
#15853 closed defect (duplicate)
Crash on Mac waking from sleep
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-13.6-x86_64-i386-64bit
ChimeraX Version: 1.8rc202405312319 (2024-05-31 23:19:45 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x00007ff855d9c700 (most recent call first):
File "/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 307 in event_loop
File "/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1003 in init
File "/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1166 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.map._map, charset_normalizer.md, PIL._imaging, matplotlib._c_internal_utils, matplotlib._path, kiwisolver._cext, matplotlib._image, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.pdb_lib._load_libs, chimerax.surface._surface, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, lz4._version, lz4.frame._frame, msgpack._cmsgpack, chimerax.core._serialize, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, psutil._psutil_osx, psutil._psutil_posix, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, chimerax.pdb._pdbio, lxml._elementpath, lxml.etree, PIL._imagingmath, PIL._webp (total: 62)
{"app_name":"ChimeraX","timestamp":"2024-08-30 16:32:36.00 +0200","app_version":"1.8.0","slice_uuid":"194a3167-3db5-3029-8d22-1d742b826bb9","build_version":"1.8.0.0","platform":1,"bundleID":"edu.ucsf.cgl.ChimeraX","share_with_app_devs":0,"is_first_party":0,"bug_type":"309","os_version":"macOS 13.6 (22G120)","roots_installed":0,"name":"ChimeraX","incident_id":"50D1148B-45E9-4FEA-BCB3-C98E4FEB163D"}
{
"uptime" : 820000,
"procRole" : "Background",
"version" : 2,
"userID" : 503,
"deployVersion" : 210,
"modelCode" : "MacBookPro15,1",
"coalitionID" : 239253,
"osVersion" : {
"train" : "macOS 13.6",
"build" : "22G120",
"releaseType" : "User"
},
"captureTime" : "2024-08-30 16:32:33.8544 +0200",
"incident" : "50D1148B-45E9-4FEA-BCB3-C98E4FEB163D",
"pid" : 91541,
"cpuType" : "X86-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2024-08-30 11:51:34.8715 +0200",
"procStartAbsTime" : 818366004935414,
"procExitAbsTime" : 825751541130904,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.8.0","CFBundleVersion":"1.8.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"3DB4FC6A-27E9-56B8-95F0-FC21B148075B","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "407E303B-BF04-4FEE-B7F6-8A8451CA77F1",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 0,
"wakeTime" : 1821,
"bridgeVersion" : {"build":"21P365","train":"8.0"},
"sleepWakeUUID" : "D551DAD9-A913-4929-B4DB-EE7884068F42",
"sip" : "enabled",
"vmRegionInfo" : "0 is not in any region. Bytes before following region: 4493860864\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n __TEXT 10bdae000-10bdb2000 [ 16K] r-x\/r-x SM=COW ...acOS\/ChimeraX",
"exception" : {"codes":"0x0000000000000001, 0x0000000000000000","rawCodes":[1,0],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000000"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":91541},
"vmregioninfo" : "0 is not in any region. Bytes before following region: 4493860864\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n __TEXT 10bdae000-10bdb2000 [ 16K] r-x\/r-x SM=COW ...acOS\/ChimeraX",
"extMods" : {"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
"faultingThread" : 0,
"threads" : [{"queue":"com.apple.main-thread","instructionState":{"instructionStream":{"bytes":[41,7,197,252,41,71,32,72,131,199,64,72,131,234,64,119,237,197,252,17,4,23,197,252,17,68,23,32,197,248,119,93,195,72,137,52,23,72,131,234,8,115,246,72,131,194,8,116,11,64,136,116,23,255,72,131,234,1,117,245,93,195,144,144,144,144,144,144,144,144,144,144,144,144,144,144,144,144,85,72,137,229,72,137,249,72,137,250,72,131,231,240,102,15,239,192,102,15,116,7,102,15,215,240,72,131,225,15,72,131,200,255,72,211,224,33,198,116,23,15,188,198,72,41,215,72,1,248,93,195,102,46,15,31,132,0,0,0,0,0,102,144,72,131,199,16,102,15,239,192,102,15,116,7,102,15,215,240,133,246,116,236,235,211,101,72,139,12,37,24,0,0,0,65,137,200,49,192,240,76,15,177,7,15,133,122,31,0,0,233,0,0],"offset":96}},"frames":[{"imageOffset":33250,"symbol":"__pthread_kill","symbolLocation":10,"imageIndex":161},{"imageOffset":24294,"symbol":"pthread_kill","symbolLocation":263,"imageIndex":162},{"imageOffset":271873,"symbol":"raise","symbolLocation":26,"imageIndex":163},{"imageOffset":2540852,"symbol":"faulthandler_fatal_error","symbolLocation":388,"imageIndex":1},{"imageOffset":13805,"symbol":"_sigtramp","symbolLocation":29,"imageIndex":164},{"imageOffset":0,"imageIndex":165},{"imageOffset":38708055,"imageIndex":56},{"imageOffset":38399649,"imageIndex":56},{"imageOffset":36937448,"imageIndex":56},{"imageOffset":36958840,"imageIndex":56},{"imageOffset":108068521,"imageIndex":56},{"imageOffset":108093982,"imageIndex":56},{"imageOffset":82367923,"imageIndex":56},{"imageOffset":50359862,"imageIndex":56},{"imageOffset":50343563,"imageIndex":56},{"imageOffset":86165,"symbol":"displayConfigFinalizedProc","symbolLocation":259,"imageIndex":166},{"imageOffset":45581,"symbol":"CGSPostLocalNotification","symbolLocation":220,"imageIndex":166},{"imageOffset":44320,"symbol":"(anonymous namespace)::notify_datagram_handler(unsigned int, CGSDatagramType, void*, unsigned long, void*)","symbolLocation":98,"imageIndex":166},{"imageOffset":3319006,"symbol":"CGSDatagramReadStream::dispatchMainQueueDatagrams()","symbolLocation":202,"imageIndex":166},{"imageOffset":3318789,"symbol":"invocation function for block in CGSDatagramReadStream::mainQueueWakeup()","symbolLocation":18,"imageIndex":166},{"imageOffset":7569,"symbol":"_dispatch_call_block_and_release","symbolLocation":12,"imageIndex":167},{"imageOffset":12339,"symbol":"_dispatch_client_callout","symbolLocation":8,"imageIndex":167},{"imageOffset":65487,"symbol":"_dispatch_main_queue_drain","symbolLocation":954,"imageIndex":167},{"imageOffset":64519,"symbol":"_dispatch_main_queue_callback_4CF","symbolLocation":31,"imageIndex":167},{"imageOffset":770469,"symbol":"__CFRUNLOOP_IS_SERVICING_THE_MAIN_DISPATCH_QUEUE__","symbolLocation":9,"imageIndex":168},{"imageOffset":507599,"symbol":"__CFRunLoopRun","symbolLocation":2452,"imageIndex":168},{"imageOffset":503505,"symbol":"CFRunLoopRunSpecific","symbolLocation":560,"imageIndex":168},{"imageOffset":192317,"symbol":"RunCurrentEventLoopInMode","symbolLocation":292,"imageIndex":169},{"imageOffset":191822,"symbol":"ReceiveNextEventCommon","symbolLocation":657,"imageIndex":169},{"imageOffset":191144,"symbol":"_BlockUntilNextEventMatchingListInModeWithFilter","symbolLocation":64,"imageIndex":169},{"imageOffset":254556,"symbol":"_DPSNextEvent","symbolLocation":858,"imageIndex":170},{"imageOffset":250118,"symbol":"-[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:]","symbolLocation":1214,"imageIndex":170},{"imageOffset":194440,"symbol":"-[NSApplication run]","symbolLocation":586,"imageIndex":170},{"imageOffset":93965,"imageIndex":69},{"imageOffset":583190,"symbol":"QEventLoop::exec(QFlags)","symbolLocation":486,"imageIndex":45},{"imageOffset":545047,"symbol":"QCoreApplication::exec()","symbolLocation":119,"imageIndex":45},{"imageOffset":2261324,"symbol":"meth_QApplication_exec(_object*, _object*)","symbolLocation":92,"imageIndex":48},{"imageOffset":1044954,"symbol":"cfunction_call","symbolLocation":90,"imageIndex":1},{"imageOffset":630769,"symbol":"_PyObject_MakeTpCall","symbolLocation":129,"imageIndex":1},{"imageOffset":1868407,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":61255,"imageIndex":1},{"imageOffset":1802218,"symbol":"PyEval_EvalCode","symbolLocation":282,"imageIndex":1},{"imageOffset":1779827,"symbol":"builtin_exec","symbolLocation":483,"imageIndex":1},{"imageOffset":1047348,"symbol":"cfunction_vectorcall_FASTCALL_KEYWORDS","symbolLocation":68,"imageIndex":1},{"imageOffset":1868159,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":61007,"imageIndex":1},{"imageOffset":1892992,"symbol":"_PyEval_Vector","symbolLocation":128,"imageIndex":1},{"imageOffset":2512477,"symbol":"pymain_run_module","symbolLocation":253,"imageIndex":1},{"imageOffset":2511137,"symbol":"Py_RunMain","symbolLocation":2225,"imageIndex":1},{"imageOffset":2515163,"symbol":"pymain_main","symbolLocation":43,"imageIndex":1},{"imageOffset":2515114,"symbol":"Py_Main","symbolLocation":42,"imageIndex":1},{"imageOffset":15770,"symbol":"main","symbolLocation":122,"imageIndex":0},{"imageOffset":25631,"symbol":"start","symbolLocation":1903,"imageIndex":171}],"id":13201650,"triggered":true,"threadState":{"r13":{"value":105553141708033},"rax":{"value":0},"rflags":{"value":582},"cpu":{"value":0},"r14":{"value":11},"rsi":{"value":11},"r8":{"value":2},"cr2":{"value":27399421952},"rdx":{"value":0},"r10":{"value":140704568952576,"symbolLocation":0,"symbol":"_main_thread"},"r9":{"value":14757395258967641293},"r15":{"value":22},"rbx":{"value":140704568952576,"symbolLocation":0,"symbol":"_main_thread"},"trap":{"value":133},"err":{"value":33554760},"r11":{"value":582},"rip":{"value":140703437451746,"matchesCrashFrame":1},"rbp":{"value":140344760850960},"rsp":{"value":140344760850920},"r12":{"value":259},"rcx":{"value":140344760850920},"flavor":"x86_THREAD_STATE","rdi":{"value":259}},"name":"CrBrowserMain"},{"id":13202266,"name":"ThreadPoolServiceThread","frames":[{"imageOffset":44550,"symbol":"kevent64","symbolLocation":10,"imageIndex":161},{"imageOffset":75593716,"imageIndex":56},{"imageOffset":75593183,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75245773,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202267,"name":"ThreadPoolForegroundWorker","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75293834,"imageIndex":56},{"imageOffset":75297738,"imageIndex":56},{"imageOffset":75295997,"imageIndex":56},{"imageOffset":75295727,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202268,"name":"ThreadPoolBackgroundWorker","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75293834,"imageIndex":56},{"imageOffset":75297738,"imageIndex":56},{"imageOffset":75295853,"imageIndex":56},{"imageOffset":75295764,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202269,"name":"Chrome_IOThread","frames":[{"imageOffset":44550,"symbol":"kevent64","symbolLocation":10,"imageIndex":161},{"imageOffset":75593716,"imageIndex":56},{"imageOffset":75593183,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":48358146,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202270,"name":"NetworkConfigWatcher","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75039155,"imageIndex":56},{"imageOffset":74666185,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202277,"name":"Chrome_InProcGpuThread","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75039155,"imageIndex":56},{"imageOffset":74666185,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202278,"name":"Chrome_ChildIOThread","frames":[{"imageOffset":44550,"symbol":"kevent64","symbolLocation":10,"imageIndex":161},{"imageOffset":75593716,"imageIndex":56},{"imageOffset":75593183,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":122838530,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202279,"name":"CompositorTileWorker1","frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":75462980,"imageIndex":56},{"imageOffset":113394117,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202280,"name":"ThreadPoolSingleThreadSharedForeground0","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75293834,"imageIndex":56},{"imageOffset":75296343,"imageIndex":56},{"imageOffset":75296045,"imageIndex":56},{"imageOffset":75295784,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202282,"name":"NetworkConfigWatcher","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75039155,"imageIndex":56},{"imageOffset":74666185,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202283,"name":"VizCompositorThread","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":74666082,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202284,"name":"NetworkService","frames":[{"imageOffset":44550,"symbol":"kevent64","symbolLocation":10,"imageIndex":161},{"imageOffset":75593716,"imageIndex":56},{"imageOffset":75593183,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202285,"name":"NetworkConfigWatcher","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75039155,"imageIndex":56},{"imageOffset":74666185,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202286,"name":"ThreadPoolSingleThreadForegroundBlocking1","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75293834,"imageIndex":56},{"imageOffset":75297738,"imageIndex":56},{"imageOffset":75296093,"imageIndex":56},{"imageOffset":75295774,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202359,"name":"NetworkConfigWatcher","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75039155,"imageIndex":56},{"imageOffset":74666185,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202403,"name":"com.apple.NSEventThread","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":512015,"symbol":"__CFRunLoopServiceMachPort","symbolLocation":145,"imageIndex":168},{"imageOffset":506512,"symbol":"__CFRunLoopRun","symbolLocation":1365,"imageIndex":168},{"imageOffset":503505,"symbol":"CFRunLoopRunSpecific","symbolLocation":560,"imageIndex":168},{"imageOffset":1696757,"symbol":"_NSEventThread","symbolLocation":132,"imageIndex":170},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202416,"name":"MemoryInfra","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75039155,"imageIndex":56},{"imageOffset":74666185,"imageIndex":56},{"imageOffset":75194449,"imageIndex":56},{"imageOffset":74879192,"imageIndex":56},{"imageOffset":75351720,"imageIndex":56},{"imageOffset":75352126,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202417,"name":"ThreadPoolSingleThreadSharedBackgroundBlocking2","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75293834,"imageIndex":56},{"imageOffset":75296343,"imageIndex":56},{"imageOffset":75295901,"imageIndex":56},{"imageOffset":75295804,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202418,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202419,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202420,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202421,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202422,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202423,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202424,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202425,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202426,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202427,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202428,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13202429,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":57826,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":18,"imageIndex":172},{"imageOffset":108261782,"imageIndex":56},{"imageOffset":108267659,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13205246,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":3470047,"symbol":"blas_thread_server","symbolLocation":207,"imageIndex":19},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13205247,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":3470047,"symbol":"blas_thread_server","symbolLocation":207,"imageIndex":19},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13205248,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":3470047,"symbol":"blas_thread_server","symbolLocation":207,"imageIndex":19},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13205249,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":3470047,"symbol":"blas_thread_server","symbolLocation":207,"imageIndex":19},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13205250,"frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":3470047,"symbol":"blas_thread_server","symbolLocation":207,"imageIndex":19},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13326949,"name":"QFileInfoGatherer","frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":2231675,"imageIndex":45},{"imageOffset":2231525,"symbol":"QWaitCondition::wait(QMutex*, QDeadlineTimer)","symbolLocation":85,"imageIndex":45},{"imageOffset":4704546,"symbol":"QFileInfoGatherer::run()","symbolLocation":146,"imageIndex":50},{"imageOffset":2191737,"imageIndex":45},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13337335,"name":"QFileInfoGatherer","frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":2231675,"imageIndex":45},{"imageOffset":2231525,"symbol":"QWaitCondition::wait(QMutex*, QDeadlineTimer)","symbolLocation":85,"imageIndex":45},{"imageOffset":4704546,"symbol":"QFileInfoGatherer::run()","symbolLocation":146,"imageIndex":50},{"imageOffset":2191737,"imageIndex":45},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13338008,"name":"QFileInfoGatherer","frames":[{"imageOffset":16606,"symbol":"__psynch_cvwait","symbolLocation":10,"imageIndex":161},{"imageOffset":26456,"symbol":"_pthread_cond_wait","symbolLocation":1242,"imageIndex":162},{"imageOffset":2231675,"imageIndex":45},{"imageOffset":2231525,"symbol":"QWaitCondition::wait(QMutex*, QDeadlineTimer)","symbolLocation":85,"imageIndex":45},{"imageOffset":4704546,"symbol":"QFileInfoGatherer::run()","symbolLocation":146,"imageIndex":50},{"imageOffset":2191737,"imageIndex":45},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13341261,"frames":[{"imageOffset":7088,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":162}]},{"id":13344090,"frames":[{"imageOffset":7088,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":162}]},{"id":13344186,"name":"ThreadPoolForegroundWorker","frames":[{"imageOffset":5538,"symbol":"mach_msg2_trap","symbolLocation":10,"imageIndex":161},{"imageOffset":63261,"symbol":"mach_msg2_internal","symbolLocation":78,"imageIndex":161},{"imageOffset":34260,"symbol":"mach_msg_overwrite","symbolLocation":692,"imageIndex":161},{"imageOffset":6282,"symbol":"mach_msg","symbolLocation":19,"imageIndex":161},{"imageOffset":75634614,"imageIndex":56},{"imageOffset":75039302,"imageIndex":56},{"imageOffset":75293834,"imageIndex":56},{"imageOffset":75296343,"imageIndex":56},{"imageOffset":75295997,"imageIndex":56},{"imageOffset":75295727,"imageIndex":56},{"imageOffset":75466040,"imageIndex":56},{"imageOffset":25043,"symbol":"_pthread_start","symbolLocation":125,"imageIndex":162},{"imageOffset":7123,"symbol":"thread_start","symbolLocation":15,"imageIndex":162}]},{"id":13344245,"frames":[{"imageOffset":7088,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":162}]},{"id":13344338,"frames":[{"imageOffset":7088,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":162}]}],
"usedImages" : [
{
"source" : "P",
"arch" : "x86_64",
"base" : 4493860864,
"CFBundleShortVersionString" : "1.8.0",
"CFBundleIdentifier" : "edu.ucsf.cgl.ChimeraX",
"size" : 16384,
"uuid" : "194a3167-3db5-3029-8d22-1d742b826bb9",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/MacOS\/ChimeraX",
"name" : "ChimeraX",
"CFBundleVersion" : "1.8.0.0"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4508418048,
"CFBundleShortVersionString" : "3.11.4, (c) 2001-2023 Python Software Foundation.",
"CFBundleIdentifier" : "org.python.python",
"size" : 4030464,
"uuid" : "514efc82-c424-3863-84a8-e24ffd50343d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/Python",
"name" : "Python",
"CFBundleVersion" : "3.11.4"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4496732160,
"size" : 49152,
"uuid" : "c4d4107c-7508-3d61-88f1-4f1a33945090",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/math.cpython-311-darwin.so",
"name" : "math.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4496478208,
"size" : 65536,
"uuid" : "ce1cdda7-c310-3834-8656-4829f8b0fa2a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_datetime.cpython-311-darwin.so",
"name" : "_datetime.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4496625664,
"size" : 16384,
"uuid" : "52112d00-a676-3fba-b4d8-69e98fe5e2c3",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_typing.cpython-311-darwin.so",
"name" : "_typing.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500209664,
"size" : 32768,
"uuid" : "6c0e3849-f845-3996-a69e-e956c62499ff",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/zlib.cpython-311-darwin.so",
"name" : "zlib.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500307968,
"size" : 16384,
"uuid" : "4921b552-b90a-39c6-b791-14028366f5a0",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bz2.cpython-311-darwin.so",
"name" : "_bz2.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500951040,
"size" : 196608,
"uuid" : "0fa75f51-66bf-3a60-a393-65ceea03012e",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_lzma.cpython-311-darwin.so",
"name" : "_lzma.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500373504,
"size" : 16384,
"uuid" : "cc52d89b-b174-3a9a-94ae-0c556ec7b21b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bisect.cpython-311-darwin.so",
"name" : "_bisect.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500439040,
"size" : 16384,
"uuid" : "de8dfc82-ec28-378b-b945-07e7671a35b1",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_random.cpython-311-darwin.so",
"name" : "_random.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500504576,
"size" : 32768,
"uuid" : "4e6494eb-704b-3e1a-9d97-751ef9b2d06a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_sha512.cpython-311-darwin.so",
"name" : "_sha512.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500586496,
"size" : 32768,
"uuid" : "dc4ae342-b3c4-3716-a530-b1568a67f912",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/binascii.cpython-311-darwin.so",
"name" : "binascii.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4499992576,
"size" : 32768,
"uuid" : "6333bf6e-f980-3714-b65f-a12997bfe10a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_struct.cpython-311-darwin.so",
"name" : "_struct.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500090880,
"size" : 16384,
"uuid" : "1348d940-0f3a-37cb-9a27-37db7b4734d1",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/fcntl.cpython-311-darwin.so",
"name" : "fcntl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500828160,
"size" : 16384,
"uuid" : "8d17df9f-a171-32fe-848a-1380ca2546d4",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_posixsubprocess.cpython-311-darwin.so",
"name" : "_posixsubprocess.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500668416,
"size" : 32768,
"uuid" : "ce09d1ac-f6df-3770-9dda-8f52871a152d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/select.cpython-311-darwin.so",
"name" : "select.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4500750336,
"size" : 16384,
"uuid" : "968f7d44-5fa3-31d9-8b22-92eb2206cc84",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/_arrays.cpython-311-darwin.so",
"name" : "_arrays.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4504231936,
"size" : 1130496,
"uuid" : "4442f722-a049-33ee-8cfe-e5e288b44421",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/lib\/libarrays.dylib",
"name" : "libarrays.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4524593152,
"size" : 4947968,
"uuid" : "fd4b95ff-f84a-34d3-939c-f932f374ddb9",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_umath.cpython-311-darwin.so",
"name" : "_multiarray_umath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4622979072,
"size" : 66404352,
"uuid" : "7048d1fd-b9a9-3f6a-b752-ae8be69f6c3f",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib",
"name" : "libopenblas64_.0.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4515823616,
"size" : 6565888,
"uuid" : "ae37c55e-f850-3cf7-86e4-bbd86809bc1d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgfortran.5.dylib",
"name" : "libgfortran.5.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4505542656,
"size" : 319488,
"uuid" : "a1783d23-d187-3d92-ade7-2a80619e7485",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libquadmath.0.dylib",
"name" : "libquadmath.0.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4503621632,
"size" : 69632,
"uuid" : "6d59656e-a224-3642-80b9-ca07ca06e7c1",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgcc_s.1.1.dylib",
"name" : "libgcc_s.1.1.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4503326720,
"size" : 114688,
"uuid" : "79de93b8-7f0e-3adc-8fde-969984151905",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_pickle.cpython-311-darwin.so",
"name" : "_pickle.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4503523328,
"size" : 16384,
"uuid" : "6f069f98-51a6-3478-9053-9d1f2fbebd9b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_contextvars.cpython-311-darwin.so",
"name" : "_contextvars.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4504068096,
"size" : 81920,
"uuid" : "79cd772e-9106-339a-acb7-ba43552b15a7",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_tests.cpython-311-darwin.so",
"name" : "_multiarray_tests.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4503760896,
"size" : 81920,
"uuid" : "cc072b20-11ee-3eb4-b287-8393ef51db95",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ctypes.cpython-311-darwin.so",
"name" : "_ctypes.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4522627072,
"size" : 163840,
"uuid" : "95ecdafc-7133-362d-9f9c-dd26ff543a5b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/linalg\/_umath_linalg.cpython-311-darwin.so",
"name" : "_umath_linalg.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4508266496,
"size" : 81920,
"uuid" : "2c97d6ef-aec3-361d-bc4d-0dd7137ad6ed",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/fft\/_pocketfft_internal.cpython-311-darwin.so",
"name" : "_pocketfft_internal.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4598915072,
"size" : 655360,
"uuid" : "f65b5844-4c12-381e-8af8-637620272103",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/mtrand.cpython-311-darwin.so",
"name" : "mtrand.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4507996160,
"size" : 163840,
"uuid" : "188f02a8-df66-3e0c-8946-153af5eaba44",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/bit_generator.cpython-311-darwin.so",
"name" : "bit_generator.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4597403648,
"size" : 196608,
"uuid" : "9de7ed17-62fe-3c59-a8e9-3d3074cb449e",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_common.cpython-311-darwin.so",
"name" : "_common.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4503941120,
"size" : 32768,
"uuid" : "c8a36b29-9fb1-3c9e-bb16-9698b6a379d4",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_hashlib.cpython-311-darwin.so",
"name" : "_hashlib.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4604903424,
"size" : 2260992,
"uuid" : "9077f550-4289-3012-8803-cca73b9d943d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libcrypto.1.1.dylib",
"name" : "libcrypto.1.1.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4524101632,
"size" : 32768,
"uuid" : "1de3cb49-cee7-3aec-9885-69438bcbb671",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_blake2.cpython-311-darwin.so",
"name" : "_blake2.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4600532992,
"size" : 327680,
"uuid" : "05826eca-98c1-3b93-b72a-5c523819d49a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_bounded_integers.cpython-311-darwin.so",
"name" : "_bounded_integers.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4523905024,
"size" : 81920,
"uuid" : "5b3a56f1-c5e3-344a-86ff-810850013d80",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_mt19937.cpython-311-darwin.so",
"name" : "_mt19937.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4598730752,
"size" : 65536,
"uuid" : "b543ab2e-918d-3187-88cc-ed0733756a55",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_philox.cpython-311-darwin.so",
"name" : "_philox.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4599685120,
"size" : 81920,
"uuid" : "9e7a3d28-fb10-3335-bbe0-1f2a4e6e237a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_pcg64.cpython-311-darwin.so",
"name" : "_pcg64.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4524429312,
"size" : 49152,
"uuid" : "9215cc4e-48d6-384f-aa4e-fa2ce81a8a1f",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_sfc64.cpython-311-darwin.so",
"name" : "_sfc64.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4602744832,
"size" : 770048,
"uuid" : "15252f8d-5c11-35f9-8f3b-b8c1dd465de8",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_generator.cpython-311-darwin.so",
"name" : "_generator.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4524339200,
"size" : 16384,
"uuid" : "4161acf6-42c3-3364-aca8-8d14917132b0",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_opcode.cpython-311-darwin.so",
"name" : "_opcode.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4602023936,
"size" : 147456,
"uuid" : "2c719e3d-a419-3692-a578-2819f3d838f6",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/geometry\/_geometry.cpython-311-darwin.so",
"name" : "_geometry.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4524183552,
"size" : 32768,
"uuid" : "b334e8fd-e63d-3cac-89e8-071a263d4818",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_json.cpython-311-darwin.so",
"name" : "_json.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4617416704,
"size" : 1720320,
"uuid" : "d186fce2-169a-3875-8ca4-f2fcd55371cf",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtCore.abi3.so",
"name" : "QtCore.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4609916928,
"size" : 5373952,
"uuid" : "f4950342-54e3-3755-a88f-e2a6406c1fc3",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtCore.framework\/Versions\/A\/QtCore",
"name" : "QtCore"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4600094720,
"CFBundleShortVersionString" : "3.0",
"CFBundleIdentifier" : "com.apple.security.csparser",
"size" : 98304,
"uuid" : "0e1b6c05-c1cd-3eaf-9857-4787d790f22a",
"path" : "\/System\/Library\/Frameworks\/Security.framework\/Versions\/A\/PlugIns\/csparser.bundle\/Contents\/MacOS\/csparser",
"name" : "csparser",
"CFBundleVersion" : "60420.140.26"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4604694528,
"size" : 98304,
"uuid" : "3a35763b-1c12-3805-b15b-6ffa69bd1f52",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/sip.cpython-311-darwin.so",
"name" : "sip.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4886020096,
"size" : 2867200,
"uuid" : "04d3e498-8e36-3f03-9aa5-8a19040cc57f",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWidgets.abi3.so",
"name" : "QtWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4892147712,
"size" : 4931584,
"uuid" : "6b647ba7-e77f-36aa-937c-028f9cb4875c",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWidgets.framework\/Versions\/A\/QtWidgets",
"name" : "QtWidgets"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4873531392,
"size" : 7274496,
"uuid" : "57e18c1d-e3ae-37c5-ada4-dcc62718794e",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtGui.framework\/Versions\/A\/QtGui",
"name" : "QtGui"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4616699904,
"size" : 540672,
"uuid" : "8b52e419-6929-39c7-8f25-239bd787b9b0",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtDBus.framework\/Versions\/A\/QtDBus",
"name" : "QtDBus"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4826599424,
"size" : 1523712,
"uuid" : "8cf677f1-f820-300f-bbea-491cfe548a9b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtGui.abi3.so",
"name" : "QtGui.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4602511360,
"size" : 65536,
"uuid" : "e61f8860-5bfc-3097-919d-761e57850659",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebEngineWidgets.abi3.so",
"name" : "QtWebEngineWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4622647296,
"size" : 98304,
"uuid" : "c2859284-9c93-3dd9-a78b-839df778dfea",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineWidgets.framework\/Versions\/A\/QtWebEngineWidgets",
"name" : "QtWebEngineWidgets"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4829876224,
"size" : 294912,
"uuid" : "5154fa08-ddcc-3174-a42d-4e333e150ee9",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPrintSupport.framework\/Versions\/A\/QtPrintSupport",
"name" : "QtPrintSupport"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5269417984,
"size" : 183599104,
"uuid" : "af091873-5278-3492-8e76-7c22e65c04ac",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore",
"name" : "QtWebEngineCore"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4898553856,
"size" : 4210688,
"uuid" : "1b342485-b5a8-3134-8fbe-a4e607e770f3",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQuick.framework\/Versions\/A\/QtQuick",
"name" : "QtQuick"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4862517248,
"size" : 425984,
"uuid" : "78a08e9f-03a8-3e55-b319-5d7390d883d3",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtOpenGL.framework\/Versions\/A\/QtOpenGL",
"name" : "QtOpenGL"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4861247488,
"size" : 557056,
"uuid" : "17e7e0a2-1745-3a18-a3d2-87857777737e",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQmlModels.framework\/Versions\/A\/QtQmlModels",
"name" : "QtQmlModels"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4622184448,
"size" : 180224,
"uuid" : "de6e3816-a208-301f-a7fc-0bbbb64c78a8",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebChannel.framework\/Versions\/A\/QtWebChannel",
"name" : "QtWebChannel"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4904304640,
"size" : 4292608,
"uuid" : "33075afc-2a8b-3528-b0dd-4a5b769a2f54",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQml.framework\/Versions\/A\/QtQml",
"name" : "QtQml"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4866117632,
"size" : 1146880,
"uuid" : "b57854a4-c721-36b4-830e-2fe9e929a811",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtNetwork.framework\/Versions\/A\/QtNetwork",
"name" : "QtNetwork"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4864389120,
"size" : 458752,
"uuid" : "f7f96df9-e51a-3764-90a4-730a57198670",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPositioning.framework\/Versions\/A\/QtPositioning",
"name" : "QtPositioning"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4862001152,
"size" : 81920,
"uuid" : "a2d3acde-e0db-3d21-acc4-ebfa3db5fd5c",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQuickWidgets.framework\/Versions\/A\/QtQuickWidgets",
"name" : "QtQuickWidgets"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4863156224,
"size" : 475136,
"uuid" : "9513715b-6b36-3b31-8470-149dba6c1656",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtNetwork.abi3.so",
"name" : "QtNetwork.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4830367744,
"size" : 147456,
"uuid" : "34ad5a58-946c-3e72-bdbb-522e51148d3a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtPrintSupport.abi3.so",
"name" : "QtPrintSupport.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4622462976,
"size" : 32768,
"uuid" : "9d400ff9-e70a-351e-bb34-5259e39c88b8",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebChannel.abi3.so",
"name" : "QtWebChannel.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4865011712,
"size" : 229376,
"uuid" : "e05fb3ee-5d42-3121-a19c-5ced50cb3132",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebEngineCore.abi3.so",
"name" : "QtWebEngineCore.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4869451776,
"size" : 655360,
"uuid" : "a9df58b1-89b1-36c8-9d9e-fe251bf025f2",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/platforms\/libqcocoa.dylib",
"name" : "libqcocoa.dylib"
},
{
"source" : "P",
"arch" : "x86_64h",
"base" : 4935520256,
"CFBundleShortVersionString" : "4.14.1",
"CFBundleIdentifier" : "com.apple.AMDRadeonX4000GLDriver",
"size" : 1179648,
"uuid" : "066a2903-bd13-3980-92af-ef3e2403716f",
"path" : "\/System\/Library\/Extensions\/AMDRadeonX4000GLDriver.bundle\/Contents\/MacOS\/AMDRadeonX4000GLDriver",
"name" : "AMDRadeonX4000GLDriver",
"CFBundleVersion" : "4.1.4"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4865634304,
"size" : 163840,
"uuid" : "b955d9be-5646-38cb-aba8-4337ae17c16d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/styles\/libqmacstyle.dylib",
"name" : "libqmacstyle.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4869156864,
"size" : 180224,
"uuid" : "2eccca6e-b160-375e-979b-d1d174cf5497",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/pyexpat.cpython-311-darwin.so",
"name" : "pyexpat.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4865912832,
"size" : 65536,
"uuid" : "9b2e2c2e-1abb-329d-aeb2-9921c2085377",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_socket.cpython-311-darwin.so",
"name" : "_socket.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4873351168,
"size" : 49152,
"uuid" : "19fe4936-cd05-35cf-b67f-f07ddb83c195",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/array.cpython-311-darwin.so",
"name" : "array.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4830711808,
"size" : 16384,
"uuid" : "1fceb320-1415-384c-914b-89deb7181eee",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_heapq.cpython-311-darwin.so",
"name" : "_heapq.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4866043904,
"size" : 16384,
"uuid" : "ab3e7bb1-b4dd-35a0-a44b-f87a59b1adbb",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_queue.cpython-311-darwin.so",
"name" : "_queue.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4885704704,
"size" : 98304,
"uuid" : "65c5907a-9e69-3d89-a863-0f7df59fe19b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ssl.cpython-311-darwin.so",
"name" : "_ssl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4953128960,
"size" : 393216,
"uuid" : "35eaab10-69c7-3234-bb9c-f3ec617bade8",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libssl.1.1.dylib",
"name" : "libssl.1.1.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4873465856,
"size" : 16384,
"uuid" : "82f64d2e-cca2-34b8-bb59-0743603ce84d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_scproxy.cpython-311-darwin.so",
"name" : "_scproxy.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4885405696,
"size" : 16384,
"uuid" : "ed64b7f2-4c49-3dd2-ae71-a987d310a8d5",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/grp.cpython-311-darwin.so",
"name" : "grp.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4885245952,
"size" : 32768,
"uuid" : "9b9ef339-f44c-3452-b5b0-92e4c1cfabb7",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_csv.cpython-311-darwin.so",
"name" : "_csv.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4885327872,
"size" : 16384,
"uuid" : "d0ba4ed3-33c4-30c0-9fb8-0fcdd129cd4a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/_load_libs.cpython-311-darwin.so",
"name" : "_load_libs.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4961628160,
"size" : 1196032,
"uuid" : "fbc3f321-c09c-3808-babf-abc8db9df109",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libatomstruct.dylib",
"name" : "libatomstruct.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4885471232,
"size" : 32768,
"uuid" : "88a748b9-8a16-3bfc-ba85-a21a2e8d0dfe",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libelement.dylib",
"name" : "libelement.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4885585920,
"size" : 16384,
"uuid" : "3edbdaff-bca7-3dde-878a-d25fb44e9018",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libpyinstance.dylib",
"name" : "libpyinstance.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4958863360,
"size" : 212992,
"uuid" : "06f666f8-e01d-3977-8588-cd8763539de2",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/libmolc.dylib",
"name" : "libmolc.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4957929472,
"size" : 458752,
"uuid" : "cd45a26e-b65b-3ce2-beb8-3b85f74e2cad",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cymol.cpython-311-darwin.so",
"name" : "cymol.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4959834112,
"size" : 114688,
"uuid" : "60d71170-122f-3388-8946-9dc82b508714",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/tinyarray.cpython-311-darwin.so",
"name" : "tinyarray.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4958633984,
"size" : 49152,
"uuid" : "f6ffe558-91c7-3148-a81a-e03bb00eac29",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cytmpl.cpython-311-darwin.so",
"name" : "cytmpl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4966088704,
"size" : 671744,
"uuid" : "99f6a3dc-9f85-3a3d-8ee5-4560b2308969",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/map\/_map.cpython-311-darwin.so",
"name" : "_map.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4885917696,
"size" : 16384,
"uuid" : "143bfd0a-fbaa-3849-bbaa-9d3b2d44c38f",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/charset_normalizer\/md.cpython-311-darwin.so",
"name" : "md.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4959338496,
"size" : 147456,
"uuid" : "d1f6d0b1-d05a-3cc7-8c15-0d72176e5bcb",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/charset_normalizer\/md__mypyc.cpython-311-darwin.so",
"name" : "md__mypyc.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4969349120,
"size" : 1114112,
"uuid" : "0cfdf335-42fa-36ab-845a-44fda5a4f103",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/unicodedata.cpython-311-darwin.so",
"name" : "unicodedata.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4953010176,
"size" : 32768,
"uuid" : "b7700fae-a522-3c9e-81c7-8301374c2b6e",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_multibytecodec.cpython-311-darwin.so",
"name" : "_multibytecodec.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4958765056,
"size" : 16384,
"uuid" : "83a52d52-e452-3db7-8c1f-eee3d4bbc071",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_uuid.cpython-311-darwin.so",
"name" : "_uuid.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4961128448,
"size" : 278528,
"uuid" : "6bf62b8d-952b-3c3e-87b6-67992b1c9e85",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_decimal.cpython-311-darwin.so",
"name" : "_decimal.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4971692032,
"size" : 393216,
"uuid" : "3d435819-60f1-382a-b0ff-03aa1fec22a9",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imaging.cpython-311-darwin.so",
"name" : "_imaging.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4970528768,
"size" : 655360,
"uuid" : "de0a2e7d-b9a1-33f1-9bf1-e8db3a502cb9",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libtiff.6.dylib",
"name" : "libtiff.6.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4973678592,
"size" : 671744,
"uuid" : "5077f363-3598-3431-bc7b-2cfbf3a714d9",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libjpeg.62.4.0.dylib",
"name" : "libjpeg.62.4.0.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4974432256,
"size" : 557056,
"uuid" : "5375f006-b7eb-3be7-88de-a910b38e7627",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libopenjp2.2.5.2.dylib",
"name" : "libopenjp2.2.5.2.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4959600640,
"size" : 131072,
"uuid" : "84f3a08c-6bf8-33d7-89c0-5e8026f4e202",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libz.1.3.1.dylib",
"name" : "libz.1.3.1.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4965658624,
"size" : 163840,
"uuid" : "5070a345-658e-31a4-80b9-d06f9abe9d5b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libxcb.1.dylib",
"name" : "libxcb.1.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4971298816,
"size" : 245760,
"uuid" : "2f03407e-0f9b-3146-b009-33e0f793869a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/liblzma.5.dylib",
"name" : "liblzma.5.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4961521664,
"size" : 16384,
"uuid" : "2b102593-309d-3ad2-98ff-fd87e42302d8",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libXau.6.0.0.dylib",
"name" : "libXau.6.0.0.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4965937152,
"size" : 16384,
"uuid" : "e8200b4e-f282-3cd7-9be9-8f3798584047",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/termios.cpython-311-darwin.so",
"name" : "termios.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4966002688,
"size" : 16384,
"uuid" : "ab1ede05-8390-3ffd-92d7-7ce53a7c9be2",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_c_internal_utils.cpython-311-darwin.so",
"name" : "_c_internal_utils.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4969054208,
"size" : 131072,
"uuid" : "72e8fb51-e1eb-3955-ad6f-f9d432bd89fd",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_path.cpython-311-darwin.so",
"name" : "_path.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4984123392,
"size" : 671744,
"uuid" : "9f323cc7-da32-3fe1-b98b-163a8b0bc4f6",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/ft2font.cpython-311-darwin.so",
"name" : "ft2font.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4973330432,
"size" : 98304,
"uuid" : "b95403ec-ebee-307e-a234-a98fa49425bf",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/kiwisolver\/_cext.cpython-311-darwin.so",
"name" : "_cext.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4983894016,
"size" : 163840,
"uuid" : "fe32f21a-cd3a-3ad4-9176-dddbd203789a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_image.cpython-311-darwin.so",
"name" : "_image.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4969250816,
"size" : 32768,
"uuid" : "2e49f12e-2bd1-36ff-a452-6af1ad840335",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/errorchecker.cpython-311-darwin.so",
"name" : "errorchecker.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4983459840,
"size" : 163840,
"uuid" : "84c28449-2886-395e-a902-73f67264df32",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/arraydatatype.cpython-311-darwin.so",
"name" : "arraydatatype.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4996239360,
"size" : 180224,
"uuid" : "d98e7117-18dd-37b7-9c74-472d0c79861a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/wrapper.cpython-311-darwin.so",
"name" : "wrapper.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4995776512,
"size" : 32768,
"uuid" : "1936789e-b9b0-3e1f-8cfa-fc88f0803ad5",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/formathandler.cpython-311-darwin.so",
"name" : "formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4973576192,
"size" : 32768,
"uuid" : "ada3a7a8-1026-3b4a-9d87-6fce8df2fb33",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/latebind.cpython-311-darwin.so",
"name" : "latebind.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4995493888,
"size" : 98304,
"uuid" : "7927d573-a75a-3483-b846-b34afb8cd28d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/vbo.cpython-311-darwin.so",
"name" : "vbo.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4971610112,
"size" : 16384,
"uuid" : "5c82e5f4-7664-3325-95c1-a2286b531838",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/_load_libs.cpython-311-darwin.so",
"name" : "_load_libs.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4983787520,
"size" : 32768,
"uuid" : "9c20a913-80f2-3790-82d6-f5f257f40a80",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/lib\/libpdbconnect.dylib",
"name" : "libpdbconnect.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4995891200,
"size" : 180224,
"uuid" : "cd62d8e3-6428-319c-b174-d861a467788d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/surface\/_surface.cpython-311-darwin.so",
"name" : "_surface.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5053698048,
"size" : 32768,
"uuid" : "04424808-7083-3ca4-9997-8dae04f5e18a",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqgif.dylib",
"name" : "libqgif.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5053796352,
"size" : 32768,
"uuid" : "6665c7fa-5429-307c-ae72-f02b4663e991",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqwbmp.dylib",
"name" : "libqwbmp.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5055102976,
"size" : 589824,
"uuid" : "3b812afb-4558-3629-a105-54f0123a8756",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqwebp.dylib",
"name" : "libqwebp.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5053894656,
"size" : 32768,
"uuid" : "6be87464-6bae-3acd-ba8a-0ad9c42d2192",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqico.dylib",
"name" : "libqico.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5053489152,
"size" : 32768,
"uuid" : "587053e8-9ed2-37b5-bae3-52598b1c0ed9",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqmacheif.dylib",
"name" : "libqmacheif.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5053992960,
"size" : 622592,
"uuid" : "8fa53a40-5029-35c1-b403-de4b5ebc296b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqjpeg.dylib",
"name" : "libqjpeg.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5056778240,
"size" : 442368,
"uuid" : "7a23c3a8-9cd7-3b95-9f4c-fe861273501d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqtiff.dylib",
"name" : "libqtiff.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5053587456,
"size" : 32768,
"uuid" : "24897911-1bb1-3eb1-99c4-dc57d4440d49",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqsvg.dylib",
"name" : "libqsvg.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5054697472,
"size" : 245760,
"uuid" : "535f7dfd-d62a-33b3-9e52-af14094c4e5e",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtSvg.framework\/Versions\/A\/QtSvg",
"name" : "QtSvg"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5055983616,
"size" : 32768,
"uuid" : "cbbb200f-5258-33bb-baf8-e08d98ddc672",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqpdf.dylib",
"name" : "libqpdf.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5075025920,
"size" : 8765440,
"uuid" : "14ff39ad-fca1-3b61-ada4-f5f95bd02945",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPdf.framework\/Versions\/A\/QtPdf",
"name" : "QtPdf"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5055774720,
"size" : 32768,
"uuid" : "0372cf7c-a608-3177-b1e1-bd312f0a6434",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqicns.dylib",
"name" : "libqicns.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5055873024,
"size" : 32768,
"uuid" : "52133b8a-b7f2-307f-99eb-74e22691cf79",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqtga.dylib",
"name" : "libqtga.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5056294912,
"size" : 32768,
"uuid" : "eca278d3-d60a-39de-8179-e4e3d7044450",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqmacjp2.dylib",
"name" : "libqmacjp2.dylib"
},
{
"source" : "P",
"arch" : "x86_64h",
"base" : 5056081920,
"size" : 65536,
"uuid" : "5eaf78f9-49d0-30e2-a516-d53697b7344a",
"path" : "\/usr\/lib\/libobjc-trampolines.dylib",
"name" : "libobjc-trampolines.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5056647168,
"size" : 16384,
"uuid" : "136e83be-523c-3e0a-8ee9-ac44338f577c",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/core\/_mac_util.cpython-311-darwin.so",
"name" : "_mac_util.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5064142848,
"size" : 65536,
"uuid" : "5cfe15a5-c7e4-36db-be9c-4d4ef3728796",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/numpy_formathandler.cpython-311-darwin.so",
"name" : "numpy_formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5064040448,
"size" : 32768,
"uuid" : "20c4af3a-4b84-3cc8-aa82-b08768c1116d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/nones_formathandler.cpython-311-darwin.so",
"name" : "nones_formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5267714048,
"size" : 98304,
"uuid" : "3064d9b7-75d7-343e-bf98-036ded114223",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lz4\/_version.cpython-311-darwin.so",
"name" : "_version.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5267402752,
"size" : 212992,
"uuid" : "9ff84874-4ecd-3fed-ba32-23b23bfaaecc",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lz4\/frame\/_frame.cpython-311-darwin.so",
"name" : "_frame.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5647142912,
"size" : 131072,
"uuid" : "272f9886-859c-3c84-8ea4-2bde196ca08b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/core\/_serialize.cpython-311-darwin.so",
"name" : "_serialize.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5647405056,
"size" : 131072,
"uuid" : "99497e49-7155-3c86-b62e-dd8a79f1be5d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/msgpack\/_cmsgpack.cpython-311-darwin.so",
"name" : "_cmsgpack.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5751373824,
"size" : 737280,
"uuid" : "85293474-c54e-32bd-967c-f9f9839646ae",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtOpenGL.abi3.so",
"name" : "QtOpenGL.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5268164608,
"size" : 49152,
"uuid" : "0e674aef-d74d-34e9-a46b-63ce1a6729b4",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtOpenGLWidgets.abi3.so",
"name" : "QtOpenGLWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5268312064,
"size" : 49152,
"uuid" : "c84a9a90-56dd-385a-aad3-a15d44bc216b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtOpenGLWidgets.framework\/Versions\/A\/QtOpenGLWidgets",
"name" : "QtOpenGLWidgets"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5269176320,
"size" : 32768,
"uuid" : "cc4a7194-2678-3514-acc4-75a7275bf407",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/psutil\/_psutil_osx.abi3.so",
"name" : "_psutil_osx.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5072031744,
"size" : 16384,
"uuid" : "62001a43-deed-3f40-8d2d-57ad475e6c95",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/psutil\/_psutil_posix.abi3.so",
"name" : "_psutil_posix.abi3.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5267861504,
"size" : 98304,
"uuid" : "ae16bb51-bedf-3c8a-9b96-5684b608789d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/_ribbons.cpython-311-darwin.so",
"name" : "_ribbons.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5268041728,
"size" : 32768,
"uuid" : "3b76dfeb-802d-3ce8-9151-7ec4ff5a682b",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/graphics\/_graphics.cpython-311-darwin.so",
"name" : "_graphics.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5752766464,
"size" : 524288,
"uuid" : "58e1300b-c472-3863-8fc4-4eb27185cbbf",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/mmcif.cpython-311-darwin.so",
"name" : "mmcif.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5756751872,
"size" : 442368,
"uuid" : "9141612b-bf67-390f-8b66-18a585729cab",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/_mmcif.cpython-311-darwin.so",
"name" : "_mmcif.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5665800192,
"size" : 180224,
"uuid" : "6d0a4aa1-f80b-3e16-baed-3f694111a75d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb\/_pdbio.cpython-311-darwin.so",
"name" : "_pdbio.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5837156352,
"size" : 4210688,
"uuid" : "08a0cdf4-85d3-328a-98ac-8a7ec48356eb",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lxml\/etree.cpython-311-darwin.so",
"name" : "etree.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5648699392,
"size" : 147456,
"uuid" : "a66bb1e2-ecf4-3220-9c8e-a465d9305940",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lxml\/_elementpath.cpython-311-darwin.so",
"name" : "_elementpath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5712109568,
"size" : 32768,
"uuid" : "4cafbf15-47c9-3e93-abf0-7f8f01ea6b1d",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imagingmath.cpython-311-darwin.so",
"name" : "_imagingmath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5067927552,
"size" : 16384,
"uuid" : "3fc409e5-8a0c-3a28-b969-c510ebb14695",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/mmap.cpython-311-darwin.so",
"name" : "mmap.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5069230080,
"size" : 16384,
"uuid" : "4840c39a-1a25-34b4-8447-761212371917",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_webp.cpython-311-darwin.so",
"name" : "_webp.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5600993280,
"size" : 606208,
"uuid" : "074f2081-2949-3e6f-b61d-52b3f5c95e66",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libwebp.7.dylib",
"name" : "libwebp.7.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5587546112,
"size" : 49152,
"uuid" : "904783ad-6f16-31e9-b1a8-65089262f743",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libwebpmux.3.dylib",
"name" : "libwebpmux.3.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5069467648,
"size" : 16384,
"uuid" : "77acefac-08c8-3191-ab5a-653ed960247e",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libwebpdemux.2.dylib",
"name" : "libwebpdemux.2.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 5587644416,
"size" : 32768,
"uuid" : "bf1dedf6-3f1f-3378-9ec6-c91ecb5c45e3",
"path" : "\/Applications\/ChimeraX-1.8-rc2024.05.31.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libsharpyuv.0.dylib",
"name" : "libsharpyuv.0.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703437418496,
"size" : 237568,
"uuid" : "45e634ef-1767-336e-afe5-8c0d4146abcf",
"path" : "\/usr\/lib\/system\/libsystem_kernel.dylib",
"name" : "libsystem_kernel.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703437656064,
"size" : 49152,
"uuid" : "3a3fa85c-f1fe-336c-bf68-924fc947ade3",
"path" : "\/usr\/lib\/system\/libsystem_pthread.dylib",
"name" : "libsystem_pthread.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703436267520,
"size" : 557048,
"uuid" : "d5b303ad-54f4-323b-bbe2-2d0f34c45649",
"path" : "\/usr\/lib\/system\/libsystem_c.dylib",
"name" : "libsystem_c.dylib"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703437852672,
"size" : 40944,
"uuid" : "f1798256-c6b5-335c-bbb5-7978acf41deb",
"path" : "\/usr\/lib\/system\/libsystem_platform.dylib",
"name" : "libsystem_platform.dylib"
},
{
"size" : 0,
"source" : "A",
"base" : 0,
"uuid" : "00000000-0000-0000-0000-000000000000"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703517851648,
"CFBundleShortVersionString" : "1.600.0",
"CFBundleIdentifier" : "com.apple.SkyLight",
"size" : 4141050,
"uuid" : "4fdac7b0-cb78-39fb-9e93-6e8917a6d78d",
"path" : "\/System\/Library\/PrivateFrameworks\/SkyLight.framework\/Versions\/A\/SkyLight",
"name" : "SkyLight"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703435960320,
"size" : 294900,
"uuid" : "677ae7f7-158f-328b-85e2-8a960327856d",
"path" : "\/usr\/lib\/system\/libdispatch.dylib",
"name" : "libdispatch.dylib"
},
{
"source" : "P",
"arch" : "x86_64h",
"base" : 140703438069760,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.CoreFoundation",
"size" : 4837360,
"uuid" : "2476c521-a5f5-39ef-893e-e351a15f79bb",
"path" : "\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation",
"name" : "CoreFoundation",
"CFBundleVersion" : "1979.101"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703600390144,
"CFBundleShortVersionString" : "2.1.1",
"CFBundleIdentifier" : "com.apple.HIToolbox",
"size" : 3112954,
"uuid" : "bbbf9caf-5b24-3c4c-b275-e85d272258c9",
"path" : "\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox",
"name" : "HIToolbox"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703489290240,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.AppKit",
"size" : 16809984,
"uuid" : "c5499c27-03c5-3194-815e-94cf6e6b68db",
"path" : "\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit",
"name" : "AppKit",
"CFBundleVersion" : "2299.70.136"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703434141696,
"size" : 624112,
"uuid" : "3df96f32-b9c9-3566-a6b7-4daebc6d6563",
"path" : "\/usr\/lib\/dyld",
"name" : "dyld"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703436824576,
"size" : 507896,
"uuid" : "8b258faf-4392-3385-a019-d80f49c5af31",
"path" : "\/usr\/lib\/libc++.1.dylib",
"name" : "libc++.1.dylib"
}
],
"sharedCache" : {
"base" : 140703433519104,
"size" : 21474836480,
"uuid" : "2434d7b8-6144-3aef-92fd-a483c33f40d2"
},
"vmSummary" : "ReadOnly portion of Libraries: Total=1.2G resident=0K(0%) swapped_out_or_unallocated=1.2G(100%)\nWritable regions: Total=2.6G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.6G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 384K 3 \nActivity Tracing 256K 1 \nCG backing stores 3248K 8 \nCG image 1128K 92 \nColorSync 264K 30 \nCoreAnimation 1980K 154 \nCoreGraphics 16K 3 \nCoreImage 4K 1 \nCoreServices 624K 2 \nCoreUI image data 5324K 61 \nFoundation 36K 2 \nIOKit 23.3M 3 \nKernel Alloc Once 8K 1 \nMALLOC 2.0G 1277 \nMALLOC guard page 32K 8 \nMALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)\nMach message 16K 2 \nOpenGL GLSL 384K 4 \nSTACK GUARD 172K 43 \nStack 164.8M 44 \nStack Guard 56.0M 1 \nVM_ALLOCATE 389.0M 511 \nVM_ALLOCATE (reserved) 64.0M 1 reserved VM address space (unallocated)\n__CTF 824 1 \n__DATA 42.4M 800 \n__DATA_CONST 62.4M 455 \n__DATA_DIRTY 1860K 239 \n__FONT_DATA 2352 1 \n__GLSLBUILTINS 5174K 1 \n__INFO_FILTER 8 1 \n__LINKEDIT 203.4M 163 \n__OBJC_RO 66.3M 1 \n__OBJC_RW 2013K 2 \n__TEXT 996.2M 808 \ndyld private memory 292K 3 \nmapped file 557.0M 95 \nshared memory 3016K 33 \n=========== ======= ======= \nTOTAL 4.6G 4856 \nTOTAL, minus reserved VM space 4.5G 4856 \n",
"legacyInfo" : {
"threadTriggered" : {
"name" : "CrBrowserMain",
"queue" : "com.apple.main-thread"
}
},
"logWritingSignature" : "20681dd4b80b50d2d0e505cfb00868397aaf1f53",
"trialInfo" : {
"rollouts" : [
{
"rolloutId" : "5ffde50ce2aacd000d47a95f",
"factorPackIds" : {
},
"deploymentId" : 240000419
},
{
"rolloutId" : "639124e81d92412bfb4880b3",
"factorPackIds" : {
},
"deploymentId" : 240000012
}
],
"experiments" : [
{
"treatmentId" : "c47ab4cc-c9c3-4b5d-a87c-e2433ce02597",
"experimentId" : "6639bc6ba73d460582162323",
"deploymentId" : 400000006
},
{
"treatmentId" : "3dff9c91-a8fb-424e-a656-c8d6e6037574",
"experimentId" : "662152ede2d11d1408c4db33",
"deploymentId" : 400000014
}
]
}
}
===== Log before crash start =====
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.8rc202405312319 (2024-05-31)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/rosspopoff/Dropbox/Trono_Lab/37-FindingDUF3669/9-PTPSP_data/cryosparc/2024.05.29_Modelpaper.cxs
> format session
Opened cryosparc_P110_J215_002_volume_mask_refine.mrc as #1, grid size
440,440,440, pixel 0.926, shown at level 5e-05, step 1, values float32
Opened Cryo_Rod_volume_map as #4, grid size 440,440,440, pixel 0.926, shown at
level 0.0395, step 2, values float32
Opened Cryo_Coiled_coil as #5, grid size 256,256,256, pixel 1.59, shown at
level 0.263, step 1, values float32
Opened Cryo_Coiled_coil x flip as #6, grid size 256,256,256, pixel 1.59, shown
at level 0.259, step 1, values float32
Opened Cryo_Rod_Aligned_AF3#8_Volume as #7, grid size 440,440,440, pixel
0.926, shown at level 0.041, step 1, values float32
Opened Cryo_Rod_Aligned_Xflip_AF3#10_Volume as #9, grid size 440,440,440,
pixel 0.926, shown at level 0.0388, step 1, values float32
opened ChimeraX session
> combine #3
> select add #11
9444 atoms, 9660 bonds, 1194 residues, 2 models selected
> select subtract #10
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> show sel cartoons
> ui mousemode right "translate selected models"
> view matrix models
> #11,-0.71372,-0.60391,0.3548,187.12,-0.68351,0.71118,-0.16445,331.03,-0.15302,-0.35988,-0.92037,145.56
> view matrix models
> #11,-0.71372,-0.60391,0.3548,208.37,-0.68351,0.71118,-0.16445,337.08,-0.15302,-0.35988,-0.92037,36.383
> ui mousemode right select
> select subtract #11
Nothing selected
Drag select of 22 residues
> delete atoms sel
> delete bonds sel
Drag select of 2 residues
Drag select of 24 residues
> delete atoms sel
> delete bonds sel
Drag select of 22 residues
> delete atoms sel
> delete bonds sel
> select add #11
4240 atoms, 4332 bonds, 529 residues, 1 model selected
> ui mousemode right select
> ui mousemode right "translate selected models"
> view matrix models
> #11,-0.71372,-0.60391,0.3548,408.05,-0.68351,0.71118,-0.16445,367.04,-0.15302,-0.35988,-0.92037,206.32
> ui mousemode right select
> select clear
Drag select of 5 residues
> select add #11
4240 atoms, 4332 bonds, 529 residues, 1 model selected
> select subtract #11
Nothing selected
> close #3
> close session
> open
> /Users/rosspopoff/Dropbox/Trono_Lab/37-FindingDUF3669/9-PTPSP_data/cryosparc/2024.05.29_Modelpaper.cxs
> format session
Opened cryosparc_P110_J215_002_volume_mask_refine.mrc as #1, grid size
440,440,440, pixel 0.926, shown at level 5e-05, step 1, values float32
Opened Cryo_Rod_volume_map as #4, grid size 440,440,440, pixel 0.926, shown at
level 0.0395, step 2, values float32
Opened Cryo_Coiled_coil as #5, grid size 256,256,256, pixel 1.59, shown at
level 0.263, step 1, values float32
Opened Cryo_Coiled_coil x flip as #6, grid size 256,256,256, pixel 1.59, shown
at level 0.259, step 1, values float32
Opened Cryo_Rod_Aligned_AF3#8_Volume as #7, grid size 440,440,440, pixel
0.926, shown at level 0.041, step 1, values float32
Opened Cryo_Rod_Aligned_Xflip_AF3#10_Volume as #9, grid size 440,440,440,
pixel 0.926, shown at level 0.0388, step 1, values float32
opened ChimeraX session
> combine #8
> select add #11
9444 atoms, 9660 bonds, 1194 residues, 2 models selected
> select subtract #10
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> select up
23610 atoms, 24150 bonds, 2985 residues, 17 models selected
> select up
23610 atoms, 24150 bonds, 2985 residues, 24 models selected
> close #11
> open
> /Users/rosspopoff/Dropbox/Trono_Lab/37-FindingDUF3669/9-PTPSP_data/OR1_a26ff_Alphafold/OR1_a26ff_scores_rank_004_alphafold2_multimer_v3_model_1_seed_000.json
Traceback (most recent call last):
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/open_command/dialog.py", line 334, in _qt_safe
run(session, "open " + " ".join([FileNameArg.unparse(p) for p in paths]) + (""
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/core/commands/run.py", line 49, in run
results = command.run(text, log=log, return_json=return_json)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/core/commands/cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/open_command/cmd.py", line 131, in cmd_open
models = Command(session, registry=registry).run(provider_cmd_text,
log=log)[0]
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/core/commands/cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/open_command/cmd.py", line 213, in provider_open
models, status = collated_open(session, None, [data], data_format,
_add_models,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/open_command/cmd.py", line 513, in collated_open
return remember_data_format()
^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/open_command/cmd.py", line 484, in remember_data_format
models, status = func(*func_args, **func_kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/alphafold/__init__.py", line 129, in open
structs = [m for m in session.models.list(type = AtomicStructure)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.8-rc2024.05.31.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/alphafold/__init__.py", line 130, in
if hasattr(m, 'filename') and dirname(m.filename) == dirname(path)]
^^^^^^^^^^^^^^^^^^^
File "", line 152, in dirname
TypeError: expected str, bytes or os.PathLike object, not NoneType
TypeError: expected str, bytes or os.PathLike object, not NoneType
File "", line 152, in dirname
See log for complete Python traceback.
> open
> /Users/rosspopoff/Dropbox/Trono_Lab/37-FindingDUF3669/9-PTPSP_data/OR1_a26ff_Alphafold/OR1_a26ff_unrelaxed_rank_004_alphafold2_multimer_v3_model_1_seed_000.pdb
Chain information for
OR1_a26ff_unrelaxed_rank_004_alphafold2_multimer_v3_model_1_seed_000.pdb #11
---
Chain | Description
A B C | No description available
> open
> /Users/rosspopoff/Dropbox/Trono_Lab/37-FindingDUF3669/9-PTPSP_data/OR1_a26ff_Alphafold/OR1_a26ff_unrelaxed_rank_001_alphafold2_multimer_v3_model_2_seed_000.pdb
Chain information for
OR1_a26ff_unrelaxed_rank_001_alphafold2_multimer_v3_model_2_seed_000.pdb #12
---
Chain | Description
A B C | No description available
> select subtract #1
18888 atoms, 19320 bonds, 2388 residues, 20 models selected
> select subtract #2
14166 atoms, 14490 bonds, 1791 residues, 19 models selected
> select subtract #3
9444 atoms, 9660 bonds, 1194 residues, 15 models selected
> select subtract #4
9444 atoms, 9660 bonds, 1194 residues, 10 models selected
> select subtract #5
9444 atoms, 9660 bonds, 1194 residues, 8 models selected
> select subtract #6
9444 atoms, 9660 bonds, 1194 residues, 6 models selected
> select subtract #7
9444 atoms, 9660 bonds, 1194 residues, 4 models selected
> select subtract #8
4722 atoms, 4830 bonds, 597 residues, 3 models selected
> select subtract #9
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> select subtract #10
Nothing selected
> select add #11
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> ui mousemode right "translate selected models"
> view matrix models #11,1,0,0,-116.57,0,1,0,-44.183,0,0,1,-11.013
> select subtract #11
Nothing selected
> select add #11
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> view matrix models #11,1,0,0,-107.99,0,1,0,-28.469,0,0,1,1.6822
> view matrix models
> #11,0.73417,0.097041,-0.672,-104.44,0.51687,-0.72166,0.46048,-9.5469,-0.44027,-0.68541,-0.57998,21.823
> view matrix models
> #11,0.6985,0.18244,-0.69196,-105.35,0.4822,-0.83447,0.26675,-6.763,-0.52876,-0.51998,-0.67085,20.429
> close #11 #12
> select add #9
2 models selected
> select subtract #9
Nothing selected
> select add #10
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> view matrix models
> #10,0.020416,-0.03601,-0.99914,238.41,0.79209,0.61038,-0.0058134,222.74,0.61007,-0.79129,0.040985,-102.28
> show sel cartoons
> ui mousemode right select
Drag select of 20 residues
> select clear
Drag select of 21 residues
> delete atoms sel
> delete bonds sel
Drag select of 12 residues
> select clear
Drag select of 34 residues
> select clear
Drag select of 21 residues
> delete atoms sel
> delete bonds sel
> select clear
Drag select of 18 residues
> delete atoms sel
> delete bonds sel
Drag select of 4 residues
> delete atoms sel
> delete bonds sel
> select add #10
4269 atoms, 4362 bonds, 533 residues, 1 model selected
> show sel surfaces
> hide sel surfaces
> show sel surfaces
> transparency (#!10 & sel) 80
> hide sel cartoons
> color (#!10 & sel) light gray
> show sel cartoons
> hide sel surfaces
> undo
> show sel surfaces
> rename #10 Model
> select clear
> ui mousemode right "translate selected models"
> select add #10
4269 atoms, 4362 bonds, 533 residues, 1 model selected
> view matrix models
> #10,0.020416,-0.03601,-0.99914,268.51,0.79209,0.61038,-0.0058134,291.87,0.61007,-0.79129,0.040985,-71.204
> view matrix models
> #10,0.020416,-0.03601,-0.99914,265.05,0.79209,0.61038,-0.0058134,284.55,0.61007,-0.79129,0.040985,-74.86
> view matrix models
> #10,0.60627,-0.15861,-0.77928,265.75,0.77022,0.36108,0.52573,285.86,0.198,-0.91895,0.34107,-74.224
> view matrix models
> #10,0.76801,-0.094854,-0.63338,268.08,0.63622,0.2264,0.73754,286.02,0.073436,-0.96941,0.23422,-75.984
> select subtract #10
3 models selected
> select add #10
4269 atoms, 4362 bonds, 533 residues, 1 model selected
> select subtract #10
3 models selected
> select add #9
2 models selected
> select subtract #9
Nothing selected
> select add #3
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> select subtract #3
3 models selected
> select add #3
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> select subtract #3
3 models selected
> select add #2
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> view matrix models
> #2,-0.09195,0.31094,-0.94597,151.18,0.7664,0.62862,0.13213,476.46,0.63575,-0.71285,-0.29611,13.95
> select add #10
8991 atoms, 9192 bonds, 1130 residues, 5 models selected
> select subtract #2
4269 atoms, 4362 bonds, 533 residues, 7 models selected
> view matrix models
> #10,0.76801,-0.094854,-0.63338,371.52,0.63622,0.2264,0.73754,314.87,0.073436,-0.96941,0.23422,269.65
> view matrix models
> #10,0.76801,-0.094854,-0.63338,368.7,0.63622,0.2264,0.73754,313.96,0.073436,-0.96941,0.23422,260.33
> select subtract #10
3 models selected
> select add #3
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> select add #2
9444 atoms, 9660 bonds, 1194 residues, 5 models selected
> select subtract #3
4722 atoms, 4830 bonds, 597 residues, 7 models selected
> view matrix models
> #2,-0.09195,0.31094,-0.94597,174.09,0.7664,0.62862,0.13213,331.4,0.63575,-0.71285,-0.29611,-100.79
> select add #10
8991 atoms, 9192 bonds, 1130 residues, 5 models selected
> select subtract #2
4269 atoms, 4362 bonds, 533 residues, 7 models selected
> view matrix models
> #10,0.76801,-0.094854,-0.63338,210.55,0.63622,0.2264,0.73754,350.97,0.073436,-0.96941,0.23422,338.6
> view matrix models
> #10,0.78403,-0.070115,-0.61675,211.02,0.60046,0.33748,0.72495,352.17,0.15731,-0.93872,0.30669,339.74
> view matrix models
> #10,0.78403,-0.070115,-0.61675,208.97,0.60046,0.33748,0.72495,359.37,0.15731,-0.93872,0.30669,329.86
> view matrix models
> #10,0.78299,-0.071937,-0.61787,208.93,0.60293,0.33206,0.7254,359.31,0.15298,-0.94051,0.30337,329.8
> view matrix models
> #10,0.79137,-0.05649,-0.60872,209.21,0.5815,0.3768,0.72103,359.79,0.18863,-0.92457,0.33104,330.29
> view matrix models
> #10,0.79137,-0.05649,-0.60872,210.54,0.5815,0.3768,0.72103,361.29,0.18863,-0.92457,0.33104,333.04
> hide #8 models
> hide #!9 models
> hide #7.1 models
> hide #!7 models
> hide #6.1 models
> hide #!6 models
> hide #!4 models
> show #!4 models
> hide #!2 models
> view matrix models
> #10,0.79137,-0.05649,-0.60872,210.68,0.5815,0.3768,0.72103,356.1,0.18863,-0.92457,0.33104,328.4
> view matrix models
> #10,0.53504,0.047901,-0.84347,205.71,0.71625,0.50373,0.48295,355,0.44801,-0.86253,0.23521,330.01
> view matrix models
> #10,0.49775,0.11104,-0.86018,206.32,0.78904,0.35378,0.50225,353.39,0.36009,-0.92871,0.088484,327.83
> view matrix models
> #10,-0.17025,0.23652,-0.95659,206.85,0.73205,0.6802,0.037899,353.32,0.65964,-0.69382,-0.28895,327.49
> view matrix models
> #10,-0.070496,0.2364,-0.96909,206.97,0.76628,0.63482,0.099116,353.35,0.63863,-0.73561,-0.2259,327.45
> select subtract #10
3 models selected
> hide #!10 models
> combine #3
> close session
> open
> /Users/rosspopoff/Dropbox/Trono_Lab/37-FindingDUF3669/9-PTPSP_data/cryosparc/2024.05.28_Model_Yoan.cxs
Opened cryosparc_P110_J215_002_volume_map.mrc as #2, grid size 440,440,440,
pixel 0.926, shown at level 0.0687, step 2, values float32
Opened map_core.mrc as #10, grid size 256,256,256, pixel 1.59, shown at level
0.263, step 1, values float32
Opened cryosparc_P110_J215_002_volume_mask_refine.mrc as #1, grid size
440,440,440, pixel 0.926, shown at level 5e-05, step 1, values float32
opened ChimeraX session
> show #!1 models
> select add #2
2 models selected
> select subtract #2
Nothing selected
> rename #1 CryoEM_rod_mask
> rename #2 CryoEM_rod_volume
> hide #4 models
> show #4 models
> rename #4 A
> rename #4 CryoEM_rod_AF3
> select add #9
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> select subtract #9
Nothing selected
> rename #10 CryoEM_CC_volume
> rename #10 id #5
> rename #9 CryoEM_CC_AF3
> rename #9 id #6
> combine CryoEM_rod_AF3
Expected a keyword
> rename #4 id #3
> rename #5 id #4
> rename #6 id #5
> combine #3
> select add #6
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> view matrix models
> #6,-0.44116,-0.57715,0.68722,107,-0.84317,0.52879,-0.097174,367.64,-0.30731,-0.62232,-0.71992,116.34
> view matrix models
> #6,-0.44116,-0.57715,0.68722,107.75,-0.84317,0.52879,-0.097174,431.7,-0.30731,-0.62232,-0.71992,74.632
> ui mousemode right select
> select clear
Drag select of 24 residues
> delete atoms sel
> delete bonds sel
Drag select of 17 residues
> select clear
Drag select of 16 residues
> select clear
Drag select of 21 residues
> delete atoms sel
> delete bonds sel
Drag select of 24 residues
> delete atoms sel
> delete bonds sel
> rename #6 AF3_surface
> name DUF3669 #6:10-93
> name KRAB #6:109-184
> color #4 light gray
> color DUF3669 medium purple
> color KRAB steel blue
> color #6 light gray
> color DUF3669 medium purple
> color KRAB steel blue
> color DUF3669 #D8CEE6
> color DUF3669 #9167AC
> color DUF3669 #D8CEE6
> color DUF3669 #74459B
> color DUF3669 #9F82BC
> color KRAB #A2ADBA
> color KRAB #8898A9
> combine #6
> select add #7
4238 atoms, 4329 bonds, 528 residues, 1 model selected
Drag select of 30 residues
> undo
> ui mousemode right "translate selected models"
> view matrix models
> #7,-0.44116,-0.57715,0.68722,163.03,-0.84317,0.52879,-0.097174,409.22,-0.30731,-0.62232,-0.71992,51.993
> select subtract #7
Nothing selected
> color #7.1 #BFA1C3
> color #7.2 #9167AC
> color #7.3 #64417F
> split #7
Split copy of AF3_surface (#7) into 3 models
Chain information for copy of AF3_surface A #7.1
---
Chain | Description
A | No description available
Chain information for copy of AF3_surface B #7.2
---
Chain | Description
B | No description available
Chain information for copy of AF3_surface C #7.3
---
Chain | Description
C | No description available
> split #6
Split AF3_surface (#6) into 3 models
Chain information for AF3_surface A #6.1
---
Chain | Description
A | No description available
Chain information for AF3_surface B #6.2
---
Chain | Description
B | No description available
Chain information for AF3_surface C #6.3
---
Chain | Description
C | No description available
> select add #5
4722 atoms, 4830 bonds, 597 residues, 1 model selected
> select subtract #5
Nothing selected
> split #5
Split CryoEM_CC_AF3 (#5) into 3 models
Chain information for CryoEM_CC_AF3 A #5.1
---
Chain | Description
A | No description available
Chain information for CryoEM_CC_AF3 B #5.2
---
Chain | Description
B | No description available
Chain information for CryoEM_CC_AF3 C #5.3
---
Chain | Description
C | No description available
> split #3
Split CryoEM_rod_AF3 (#3) into 3 models
Chain information for CryoEM_rod_AF3 A #3.1
---
Chain | Description
A | No description available
Chain information for CryoEM_rod_AF3 B #3.2
---
Chain | Description
B | No description available
Chain information for CryoEM_rod_AF3 C #3.3
---
Chain | Description
C | No description available
> split #2
> rename #6 AF3_DK_surface
> rename #7 AF3_TRIMER_surface
> color #7.1 #BFA1C3
> color #7.2 #9167AC
> color #7.3 #64417F
> select add #7
4238 atoms, 4329 bonds, 528 residues, 4 models selected
> view matrix models #7,1,0,0,-74.09,0,1,0,82.431,0,0,1,64.257
> show sel surfaces
> hide sel surfaces
> show sel surfaces
> select subtract #7
3 models selected
> select add #7.1
1406 atoms, 1436 bonds, 175 residues, 1 model selected
> select add #7
4238 atoms, 4329 bonds, 528 residues, 5 models selected
> select subtract #7
3 models selected
> select add #6
4238 atoms, 4329 bonds, 528 residues, 4 models selected
> show sel surfaces
> transparency (#!6.1-3 & sel) 90
> ui mousemode right select
> select clear
> select add #7
4238 atoms, 4329 bonds, 528 residues, 4 models selected
> ui mousemode right "translate selected models"
> view matrix models #7,1,0,0,-75.07,0,1,0,83.671,0,0,1,61.184
> volume flip #2 axis x
Opened CryoEM_rod_volume x flip as #8, grid size 440,440,440, pixel 0.926,
shown at step 1, values float32
> volume flip #8 axis x
Opened CryoEM_rod_volume x flip x flip as #9, grid size 440,440,440, pixel
0.926, shown at step 1, values float32
> show #!8 models
> hide #!1 models
> show #!2 models
> hide #!2 models
> color #8 #ffb24b75 models
> color #8 #1d62eaff models
> select subtract #7
3 models selected
> select add #8
2 models selected
> view matrix models
> #8,0.087553,-0.0054174,0.99615,-130.66,-0.87083,0.48516,0.079178,236.14,-0.48372,-0.87441,0.03776,235.18
> select subtract #8
Nothing selected
> select add #9
2 models selected
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-167.69,-0.87083,0.48516,0.079178,314.03,-0.48372,-0.87441,0.03776,280.38
> rename #9 CryoEM_rod_volume
> rename #8 CryoEM_rod_volume_Xflip
> rename #9 CryoEM_rod_volume_2
> rename #8 id #10
> rename #9 id #8
> rename #10 id #9
> ui mousemode right select
> select clear
> select add #8
2 models selected
> select add #9
4 models selected
> ui mousemode right "translate selected models"
> view matrix models
> #8,0.087553,-0.0054174,0.99615,-164.77,-0.87083,0.48516,0.079178,399.52,-0.48372,-0.87441,0.03776,301.28,#9,0.087553,-0.0054174,0.99615,-127.74,-0.87083,0.48516,0.079178,321.64,-0.48372,-0.87441,0.03776,256.08
> select subtract #8
2 models selected
> select subtract #9
Nothing selected
> hide #!3 models
> hide #!4 models
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> hide #!9 models
> show #!1 models
> show #!2 models
> show #!3 models
> show #!4 models
> show #!5 models
> select add #1
3 models selected
> select add #2
5 models selected
> select add #3
4722 atoms, 4830 bonds, 597 residues, 9 models selected
> select add #4
4722 atoms, 4830 bonds, 597 residues, 11 models selected
> select add #5
9444 atoms, 9660 bonds, 1194 residues, 15 models selected
> view matrix models
> #2,0.087553,-0.0054174,0.99615,-126.95,-0.87083,0.48516,0.079178,669.46,-0.48372,-0.87441,0.03776,739.35,#1,0.13568,0.017664,0.9906,-141.79,-0.87217,0.47646,0.11096,662.72,-0.47002,-0.87902,0.080052,729.58,#4,1,0,0,18.98,0,1,0,328.98,0,0,1,203.48,#5,1,0,0,18.98,0,1,0,328.98,0,0,1,203.48,#3,1,0,0,18.98,0,1,0,328.98,0,0,1,203.48
> view matrix models
> #2,0.087553,-0.0054174,0.99615,-304.16,-0.87083,0.48516,0.079178,895.58,-0.48372,-0.87441,0.03776,904.19,#1,0.13568,0.017664,0.9906,-319,-0.87217,0.47646,0.11096,888.85,-0.47002,-0.87902,0.080052,894.42,#4,1,0,0,-158.23,0,1,0,555.1,0,0,1,368.32,#5,1,0,0,-158.23,0,1,0,555.1,0,0,1,368.32,#3,1,0,0,-158.23,0,1,0,555.1,0,0,1,368.32
> hide #!1 models
> hide #!2 models
> hide #!3 models
> hide #!4 models
> hide #!5 models
> select subtract #1
9444 atoms, 9660 bonds, 1194 residues, 12 models selected
> select subtract #2
9444 atoms, 9660 bonds, 1194 residues, 10 models selected
> select subtract #3
4722 atoms, 4830 bonds, 597 residues, 6 models selected
> select subtract #4
4722 atoms, 4830 bonds, 597 residues, 4 models selected
> select subtract #5
Nothing selected
> show #!6 models
> show #!7 models
> show #!8 models
> show #!9 models
> select add #8
2 models selected
> view matrix models
> #8,0.087553,-0.0054174,0.99615,-118.06,-0.87083,0.48516,0.079178,412.77,-0.48372,-0.87441,0.03776,310.17
> select add #9
4 models selected
> select subtract #8
2 models selected
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-93.297,-0.87083,0.48516,0.079178,335.93,-0.48372,-0.87441,0.03776,265.89
> volume #9 level 0.05334
> volume #8 level 0.0533
> select add #8
4 models selected
> select subtract #9
2 models selected
> view matrix models
> #8,0.087553,-0.0054174,0.99615,-407.88,-0.87083,0.48516,0.079178,445.46,-0.48372,-0.87441,0.03776,312.07
> select subtract #8
Nothing selected
> select add #9
2 models selected
> hide #!8 models
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-131.66,-0.87083,0.48516,0.079178,421.98,-0.48372,-0.87441,0.03776,294.72
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-132.54,-0.87083,0.48516,0.079178,431.18,-0.48372,-0.87441,0.03776,300.33
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-130,-0.87083,0.48516,0.079178,417.09,-0.48372,-0.87441,0.03776,310.95
> show #!8 models
> select add #8
4 models selected
> select subtract #9
2 models selected
> view matrix models
> #8,0.087553,-0.0054174,0.99615,-158.65,-0.87083,0.48516,0.079178,396.29,-0.48372,-0.87441,0.03776,172.41
> view matrix models
> #8,0.087553,-0.0054174,0.99615,-122.22,-0.87083,0.48516,0.079178,340.88,-0.48372,-0.87441,0.03776,272.5
> select subtract #8
Nothing selected
> select add #9
2 models selected
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-205.05,-0.87083,0.48516,0.079178,390.81,-0.48372,-0.87441,0.03776,314.95
> select add #8
4 models selected
> select subtract #9
2 models selected
> view matrix models
> #8,0.087553,-0.0054174,0.99615,-127.11,-0.87083,0.48516,0.079178,409.09,-0.48372,-0.87441,0.03776,326.22
> hide #!9 models
> volume #8 level 0.03045
> surface dust #8 size 9.26
> show #!9 models
> select subtract #8
Nothing selected
> select add #9
2 models selected
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-275.85,-0.87083,0.48516,0.079178,384.65,-0.48372,-0.87441,0.03776,324.26
> select subtract #9
Nothing selected
> select add #8
2 models selected
> view matrix models
> #8,0.087553,-0.0054174,0.99615,-128.68,-0.87083,0.48516,0.079178,415,-0.48372,-0.87441,0.03776,314.07
> select subtract #8
Nothing selected
> select add #9
2 models selected
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-221.68,-0.87083,0.48516,0.079178,251.45,-0.48372,-0.87441,0.03776,227.98
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-223.3,-0.87083,0.48516,0.079178,251.24,-0.48372,-0.87441,0.03776,218.02
> view matrix models
> #9,0.087553,-0.0054174,0.99615,-219.1,-0.87083,0.48516,0.079178,201.87,-0.48372,-0.87441,0.03776,204.77
> hide #!6 models
> show #!6 models
> select add #8
4 models selected
> select subtract #8
2 models selected
> select add #8
4 models selected
> select subtract #9
2 models selected
> color #8 #ebebebff models
> color #8 white models
> color #8 #ebebebff models
> color #8 #d6d6d6ff models
> color #8 silver models
> color #8 #d783ffff models
> color #8 #ff85ffff models
> color #8 #bfa1c3ff models
> transparency #8.1 70
> lighting flat
> lighting full
> lighting soft
> graphics silhouettes false
> graphics silhouettes true
> lighting flat
> lighting full
> lighting soft
> lighting simple
> ui tool show "Side View"
> select add #8
3 models selected
> select subtract #8
Nothing selected
> save
> /Users/rosspopoff/Dropbox/Trono_Lab/37-FindingDUF3669/9-PTPSP_data/cryosparc/2024.05.29_Modelpaper_2.cxs
No map chosen to save
> save
> /Users/rosspopoff/Dropbox/Trono_Lab/37-FindingDUF3669/9-PTPSP_data/cryosparc/blo.tif
> width 2000 height 1443 supersample 3 transparentBackground true
===== Log before crash end =====
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.8rc202405312319 (2024-05-31)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-4.14.1
OpenGL renderer: AMD Radeon Pro 560X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.
Python: 3.11.4
Locale: UTF-8
Qt version: PyQt6 6.6.1, Qt 6.6.1
Qt runtime version: 6.6.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro15,1
Processor Name: 6-Core Intel Core i9
Processor Speed: 2.9 GHz
Number of Processors: 1
Total Number of Cores: 6
L2 Cache (per Core): 256 KB
L3 Cache: 12 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
System Firmware Version: 2020.0.1.0.0 (iBridge: 21.16.365.0.0,0)
OS Loader Version: 577.140.2~15
Software:
System Software Overview:
System Version: macOS 13.6 (22G120)
Kernel Version: Darwin 22.6.0
Time since boot: 20 days, 14 hours, 47 minutes
Graphics/Displays:
Intel UHD Graphics 630:
Chipset Model: Intel UHD Graphics 630
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x3e9b
Revision ID: 0x0000
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal Support: Metal 3
Radeon Pro 560X:
Chipset Model: Radeon Pro 560X
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 4 GB
Vendor: AMD (0x1002)
Device ID: 0x67ef
Revision ID: 0x00c2
ROM Revision: 113-C980AL-075
VBIOS Version: 113-C97501U-005
EFI Driver Version: 01.A1.075
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal Support: Metal 2
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 0.7.16
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 2.4.1
Babel: 2.15.0
beautifulsoup4: 4.12.3
blockdiag: 3.0.0
blosc2: 2.0.0
build: 1.2.1
certifi: 2023.11.17
cftime: 1.6.3
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.17
ChimeraX-AddH: 2.2.6
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.5
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.12.7
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.57
ChimeraX-AtomicLibrary: 14.0.5
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.4.6
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.12.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.7
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.4
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.6
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.8rc202405312319
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.3
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2.4
ChimeraX-DiffPlot: 1.0
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.10
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.1.6
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.3
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.7.1
ChimeraX-MedicalToolbar: 1.0.3
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.14.1
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.16
ChimeraX-ModelPanel: 1.5
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13.4
ChimeraX-PDB: 2.7.5
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.1
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.4.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.2
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.0.15
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.11.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.16.5
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.39.1
ChimeraX-uniprot: 2.3
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.3
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.4
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
contourpy: 1.2.1
cxservices: 1.2.2
cycler: 0.12.1
Cython: 3.0.10
debugpy: 1.8.1
decorator: 5.1.1
docutils: 0.20.1
executing: 2.0.1
filelock: 3.13.4
fonttools: 4.53.0
funcparserlib: 2.0.0a0
glfw: 2.7.0
grako: 3.16.5
h5py: 3.11.0
html2text: 2024.2.26
idna: 3.7
ihm: 1.0
imagecodecs: 2024.1.1
imagesize: 1.4.1
ipykernel: 6.29.2
ipython: 8.21.0
ipywidgets: 8.1.3
jedi: 0.19.1
jinja2: 3.1.4
jupyter-client: 8.6.0
jupyter-core: 5.7.2
jupyterlab-widgets: 3.0.11
kiwisolver: 1.4.5
line-profiler: 4.1.2
lxml: 5.2.1
lz4: 4.3.3
MarkupSafe: 2.1.5
matplotlib: 3.8.4
matplotlib-inline: 0.1.7
msgpack: 1.0.8
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.10.0
numpy: 1.26.4
openvr: 1.26.701
packaging: 23.2
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pexpect: 4.9.0
pillow: 10.3.0
pip: 24.0
pkginfo: 1.10.0
platformdirs: 4.2.2
prompt-toolkit: 3.0.45
psutil: 5.9.8
ptyprocess: 0.7.0
pure-eval: 0.2.2
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
pygments: 2.17.2
pynmrstar: 3.3.4
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.3401
pyparsing: 3.1.2
pyproject-hooks: 1.1.0
PyQt6-commercial: 6.6.1
PyQt6-Qt6: 6.6.3
PyQt6-sip: 13.6.0
PyQt6-WebEngine-commercial: 6.6.0
PyQt6-WebEngine-Qt6: 6.6.3
python-dateutil: 2.9.0.post0
pytz: 2024.1
pyzmq: 26.0.3
qtconsole: 5.5.1
QtPy: 2.4.1
RandomWords: 0.4.0
requests: 2.31.0
scipy: 1.13.0
setuptools: 69.5.1
setuptools-scm: 8.0.4
sfftk-rw: 0.8.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.5
sphinx: 7.2.6
sphinx-autodoc-typehints: 2.0.1
sphinxcontrib-applehelp: 1.0.8
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.6
sphinxcontrib-htmlhelp: 2.0.5
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.7
sphinxcontrib-serializinghtml: 1.1.10
stack-data: 0.6.3
superqt: 0.6.3
tables: 3.8.0
tcia-utils: 1.5.1
tifffile: 2024.1.30
tinyarray: 1.2.4
tornado: 6.4
traitlets: 5.14.2
typing-extensions: 4.12.1
tzdata: 2024.1
urllib3: 2.2.1
wcwidth: 0.2.13
webcolors: 1.13
wheel: 0.43.0
wheel-filename: 1.4.1
widgetsnbextension: 4.0.11
Change History (2)
comment:1 by , 14 months ago
| Component: | Unassigned → Window Toolkit |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash on Mac waking from sleep |
comment:2 by , 14 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
Note:
See TracTickets
for help on using tickets.
Mac Qt 6.6 bug, crash in displayConfigFinalizedProc. Either plugging in or unplugging display or waking from sleep.