![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Timeline
Aug 24, 2020:
- 6:02 PM Ticket #3651 (Two, two commands in one) created by
- […]
- 4:50 PM Ticket #3218 (Duplicate residues created in Chain) closed by
- fixed: F86 can be polymeric, but its phosphorus is named P1, so loosened …
- 3:49 PM Ticket #3650 (degenerate structure) closed by
- nonchimerax: Hi Valentyn, As per the log message "Structure has degenerate atomic …
- 3:22 PM Ticket #3650 (degenerate structure) created by
- […]
- 2:28 PM Ticket #3649 (radio button non-existent) closed by
- duplicate
- 2:20 PM Ticket #3646 (Attempt to option-group check button which is None) closed by
- can't reproduce: Seems impossible looking hard at the code. Would need an actual …
- 2:11 PM Ticket #3649 (radio button non-existent) created by
- […]
- 2:10 PM Ticket #3648 (radio button non-existent) created by
- […]
- 1:55 PM Ticket #3647 (Read Amber format) created by
- as per summary
- 1:26 PM Ticket #3646 (Attempt to option-group check button which is None) created by
- […]
- 10:40 AM Ticket #3642 (Bad IDATM typing) closed by
- not a bug: The residue was named 'A' (e.g. adenosine in RNA) when it shouldn't …
Aug 23, 2020:
- 2:19 PM Ticket #3276 (nucleotide sugar-tubes disconnected from ribbon in restored session) closed by
- fixed: Fixed. I made Structure update_graphics_if_needed() public and had …
Aug 22, 2020:
- 11:26 AM Ticket #3341 (Memory error in libqsvg.so on exit) closed by
- fixed: Great! I assuming that the switch to building all Linux binary wheels …
- 10:08 AM ChangeLog edited by
- (diff)
- 9:10 AM Ticket #3645 (Crash setting chain ID) closed by
- can't reproduce: Need a _tad_ more info…
- 12:45 AM Ticket #3645 (Crash setting chain ID) created by
- […]
Aug 21, 2020:
- 9:26 PM Ticket #3644 (config.make sets SSL_CERT_FILE messing up curl fetch during build on Mac) created by
- I've made the ChimeraX build fetch third party libraries from plato …
- 4:34 PM Ticket #3582 (--offscreen does not work on Linux (or Mac, or Windows)) closed by
- worksforme: Need more information about Linux system to help figure out where the …
- 4:32 PM Ticket #3431 (Add Fedora to RPM list) closed by
- fixed: CentOS 8 was based on Fedora 28, so saying RedHat 8/CentOS 8/Fedora …
- 4:23 PM Ticket #2517 (Start chimeraX (daily version)) closed by
- fixed: Newer Intel drivers work. In fact, the workaround broke ChimeraX with …
- 3:50 PM ChangeLog edited by
- (diff)
- 3:22 PM Ticket #2529 (chimerax don't start on windows 10) closed by
- duplicate: Duplicate of #2540.
- 3:20 PM Ticket #2501 (Widget redraw problem) closed by
- fixed: Current using Qt 5.12.9. Will be switch to 5.15.? after the 1.1 release.
- 2:51 PM Ticket #3548 (Nightly build test errors not reported on Linux) closed by
- fixed: Redoing of Linux build script appears to have fixed this.
- 11:40 AM Ticket #3643 (Don't protonate O5' for non-terminal nucleic acids) created by
- Analogous to not protonating non-C-terminal amino acids. e.g. residue …
- 11:36 AM Ticket #1122 (AddH adds spurious hydrogen to dangling 5' phosphate) closed by
- fixed: Fixed on August 3rd
- 10:52 AM Ticket #3642 (Bad IDATM typing) created by
- The nitrogen in the attached structure gets typed as N2 despite having …
- 10:48 AM Ticket #3641 (Map grouping/coloring) closed by
- fixed: Fixed. Now each map will get a distinct color even when opened with a …
- 9:55 AM Ticket #3640 (Crash showing a tooltip over a button) closed by
- can't reproduce
- 2:04 AM Ticket #3641 (Map grouping/coloring) created by
- […]
Aug 20, 2020:
- 6:58 PM Ticket #3640 (Crash showing a tooltip over a button) created by
- […]
- 5:35 PM Ticket #3388 (MatchMaker tool) closed by
- fixed: Implemented. Available in next daily build.
- 5:30 PM ChangeLog edited by
- (diff)
- 3:45 PM NeteSOW edited by
- (diff)
- 3:16 PM NeteSOW edited by
- (diff)
- 3:05 PM NeteSOW edited by
- (diff)
- 2:58 PM NeteSOW edited by
- (diff)
- 2:50 PM Ticket #3639 (Read EMDB segmentation file format) created by
- The EMDB has developed a segmentation file format for researchers to …
- 2:24 PM NeteSOW edited by
- (diff)
- 2:16 PM NeteSOW edited by
- (diff)
- 2:13 PM NeteSOW edited by
- (diff)
- 1:54 PM Ticket #3638 (toolshed_utils throwing errors at startup) closed by
- fixed
- 1:43 PM NeteSOW edited by
- (diff)
- 1:42 PM NeteSOWDraft created by
- 1:41 PM Ticket #3638 (toolshed_utils throwing errors at startup) created by
- […]
- 1:40 PM NeteSOW edited by
- (diff)
- 1:35 PM NeteSOW edited by
- (diff)
- 1:33 PM NeteSOW created by
- 1:15 PM WikiStart edited by
- (diff)
- 12:48 PM Ticket #3637 (Problems writing mmCIF of partial structure) created by
- […] surrounding_model.cif
- 10:58 AM Ticket #3636 (mmcif_write fails with temporary/unopened structure) created by
- […]
- 8:22 AM Ticket #3635 (Crash with trashed stack) closed by
- can't reproduce
- 7:54 AM Ticket #3635 (Crash with trashed stack) created by
- […]
- 12:22 AM Ticket #3633 ("save xxx.cif sel true" causes a traceback when nothing is selected) closed by
- fixed: Now successfully writes an mmCIF file with no atoms when the selection …
Aug 19, 2020:
- 11:53 PM Ticket #3490 (add restart button to dialog that says updated bundle is in use) closed by
- fixed: Works now. And even if the toolshed is a non-standard URL.
- 8:26 PM Ticket #3476 (Problems reporting Toolshed updates available) closed by
- fixed: Since this was core, it can't be fixed without making another release. …
- 8:13 PM Ticket #3475 (Move toolshed update notification into bundle) closed by
- fixed: Added TOOLSHED_OUT_OF_DATE trigger. Moved all installing and …
- 9:12 AM Ticket #3634 (Test VR with Oculus Quest) created by
- Jared reports that a 5000 atom structure 2J88 was choppy using VR with …
- 1:58 AM Ticket #3633 ("save xxx.cif sel true" causes a traceback when nothing is selected) created by
- […]
Aug 17, 2020:
- 6:36 PM Ticket #3632 (Update to Qt 5.15) created by
- We should update ChimeraX to use Qt 5.15 (released in May 2020) which …
- 6:32 PM Ticket #3631 (Move ChimeraX source code to GitHub) created by
- Source code on GItHub will be useful for outside developers. First we …
- 6:10 PM Ticket #3630 (Remove binary prereqs from ChimeraX git repository) created by
- Remove the large binary distributions of qt, numpy, wxPython, .... …
- 5:47 PM ChangeLog edited by
- (diff)
- 4:21 PM Ticket #3629 (cxconference server enables weak TLS ciphers) created by
- The RBVI cxconference server (cxconference.rbvi.ucsf.edu:443) allows …
- 3:58 PM ChangeLog edited by
- (diff)
- 1:19 PM ChangeLog edited by
- (diff)
- 1:17 PM Ticket #3392 (defattr command) closed by
- fixed: Available in next daily build
- 10:04 AM Ticket #3628 (Add command to turn off all directional lighting for a model) closed by
- fixed: I added an option "directional true/false" to the lighting model …
- 9:27 AM Ticket #3627 (So many errors) closed by
- duplicate: Duplicate of #2779 (fixed).
- 1:20 AM Ticket #3628 (Add command to turn off all directional lighting for a model) created by
- […]
Aug 15, 2020:
Aug 14, 2020:
- 5:44 PM Ticket #3626 (Use highest OpenGL version available) created by
- It would be nice if ChimeraX created OpenGL contexts with the highest …
- 3:51 PM Ticket #3625 (show_surface_clip_caps: Array argument has non-numeric values) closed by
- duplicate: This was fixed more that a year ago (bug #2277). Get ChimeraX 1.0 if …
- 2:58 PM Ticket #3625 (show_surface_clip_caps: Array argument has non-numeric values) created by
- […]
- 11:46 AM Ticket #3560 (figure 8 camera motion) closed by
- fixed: Implemented wobble command that does figure 8 motion. The wobble …
- 5:25 AM Ticket #3609 (ISOLDE installation: not a supported wheel on this platform) closed by
- fixed: Just uploaded new Clipper and ISOLDE builds, which should support …
Aug 13, 2020:
- 5:21 PM Ticket #3624 (Check ABI for Toolshed ability to install) created by
- ChimeraX is currently compiled for macOS 10.13, but the ISOLDE bundle …
- 9:45 AM Ticket #3623 (ISOLDE: cannot import name 'save' from 'chimerax.core.commands') closed by
- duplicate: Thanks for reporting this. The basic problem is that this button is …
- 3:11 AM Ticket #3623 (ISOLDE: cannot import name 'save' from 'chimerax.core.commands') created by
- […]
- 1:48 AM Ticket #3622 (ISOLDE: cannot import name 'save' from 'chimerax.core.commands') closed by
- duplicate: Yes, sorry about that. That button is long since obsolete, and I …
Aug 12, 2020:
- 11:48 PM Ticket #3375 (Toolshed uninstall failure) closed by
- fixed: This was actually a bug in distlib. The next version, > 0.31, should …
- 11:03 PM Ticket #3522 (prevent installing incompatible bundles) closed by
- fixed: Use beta pip --feature=2020-resolver to prevent installing …
- 6:24 PM Ticket #3612 (label command "onTop false" does not change existing labels) closed by
- fixed: Fixed. Bug in label command caused it to ignore the onTop option …
- 6:21 PM Ticket #3621 (many labels == problems) closed by
- fixed: Fixed. I made it give a warning message saying too many labels were …
- 11:46 AM Ticket #3620 (AddH: pretend missing N-terminal MET doesn't exist) closed by
- wontfix: I dunno, it seems unwise to me to put in a specific heuristic that …
- 10:09 AM Ticket #3622 (ISOLDE: cannot import name 'save' from 'chimerax.core.commands') created by
- […]
Aug 9, 2020:
Aug 8, 2020:
- 11:14 AM Ticket #3620 (AddH: pretend missing N-terminal MET doesn't exist) created by
- […]
- 5:29 AM Ticket #3619 (Multi-user sessions for model building) created by
- […]
Aug 7, 2020:
- 5:53 PM Ticket #3615 (Can't rewrite settings) closed by
- can't reproduce: Could not reproduce this, even when using a "perframe windowsize" …
- 1:07 PM Ticket #3618 (vseries problems) closed by
- duplicate: Hi Maria, You should upgrade to the 1.0 release of ChimeraX. I …
- 12:32 PM Ticket #3618 (vseries problems) created by
- […]
- 11:38 AM Ticket #3617 (Cartoon() 'atoms' parameter type changed) closed by
- duplicate: Duplicate of #3616
- 11:29 AM Ticket #3614 (Can't rewrite settings) closed by
- can't reproduce
- 11:05 AM Ticket #3617 (Cartoon() 'atoms' parameter type changed) created by
- […]
- 11:03 AM Ticket #3616 (cartoon() 'atoms' parameter type changed) created by
- […]
- 10:44 AM Ticket #3615 (Can't rewrite settings) created by
- […]
- 10:42 AM Ticket #3614 (Can't rewrite settings) created by
- […]
- 10:02 AM Ticket #3613 (ISOLDE: cannot import name 'save' from 'chimerax.core.commands') created by
- […]
- 9:54 AM Ticket #3612 (label command "onTop false" does not change existing labels) created by
- Command "label onTop f" does not change pre-existing labels. The …
- 9:08 AM Ticket #3610 (ISOLDE install into 0.93: The specified module could not be found) closed by
- duplicate: As per Tristan's comment -- this one is the numpy problem that got fixed.
- 9:04 AM Ticket #3608 (wrapped C/C++ object of type SaveOptionsWidget has been deleted) closed by
- duplicate: Fixed awhile ago.
- 2:58 AM Ticket #3611 (ISOLDE: The specified module could not be found) created by
- […]
- 2:11 AM Ticket #3610 (ISOLDE install into 0.93: The specified module could not be found) created by
- […]
- 1:05 AM Ticket #3609 (ISOLDE installation: not a supported wheel on this platform) created by
- […] Screen Shot 2020-08-07 at 10.04.56.JPG
Aug 6, 2020:
- 7:48 PM Ticket #3608 (wrapped C/C++ object of type SaveOptionsWidget has been deleted) created by
- […]
- 7:13 PM Ticket #859 (silhouettes on top of labels) closed by
- fixed: This was fixed maybe a year ago, possibly more. On top labels are now …
- 5:12 PM Ticket #2839 (update_buffer_data: cannot allocate huge array) closed by
- not a bug: Nothing we can do about insufficient memory. I think the error …
- 5:01 PM Ticket #2932 (View transition "jumpy") closed by
- fixed: I tried this again in current ChimeraX daily build and it is perfectly …
- 2:11 PM Ticket #3331 (Installation error) closed by
- fixed
- 2:05 PM Ticket #3597 (Can't install bundles with circular dependencies) closed by
- fixed: This is fixed by #3598.
- 1:16 PM ChangeLog edited by
- (diff)
- 1:07 PM Ticket #3598 (make install of bundle gives "No bundles were installed") closed by
- fixed: I just checked in a fix for this. I kept using the new resolver, but …
- 12:05 PM Ticket #11 (Add dome fisheye rendering) closed by
- fixed: Added dome camera january 2020.
- 11:25 AM Ticket #3606 (ChimeraX not running on cluster) closed by
- nonchimerax: If at all possible you should move your data files to your local …
- 9:26 AM Ticket #3603 (Nucleotides ladder: subtracting Nones) closed by
- fixed: Please update your version of ChimeraX to fix this bug. The only …
- 9:14 AM Ticket #3607 (Help tool not in UI window list) closed by
- can't reproduce
- 9:09 AM Ticket #3604 ('open' syntax problem) closed by
- not a bug: Hi Santiago, The "coord true" argument is only legal when opening a …
- 9:04 AM Ticket #3607 (Help tool not in UI window list) created by
- […]
- 8:10 AM Ticket #3606 (ChimeraX not running on cluster) created by
- […]
- 4:04 AM Ticket #3605 (wrapped C/C++ object of type SideViewCanvas has been deleted) created by
- […]
Aug 5, 2020:
- 8:46 PM Ticket #3604 ('open' syntax problem) created by
- […]
- 7:10 PM Ticket #3342 (Segger: crash selecting segments) closed by
- can't reproduce: Appears to be an infinite recursion loop but cannot reproduce.
- 7:07 PM Ticket #3417 (labels don't work in headless mode) closed by
- fixed: Greg fixed this using Qt offscreen platform. Begin forwarded message: …
- 7:00 PM Ticket #3558 (Session restore: Tried to add model with the same id as another model) closed by
- can't reproduce: No response from reporter. Can't reproduce.
- 6:59 PM Ticket #3603 (Nucleotides ladder: subtracting Nones) created by
- […]
- 6:53 PM Ticket #3107 (Enable depth cue with mesh lighting off) closed by
- fixed: Fixed. Unlit volume meshes now have depth cue. Now …
- 6:52 PM Ticket #2738 (Make volume mesh_lighting = False keep depth cueing) closed by
- fixed: Fixed. Unlit volume meshes now have depth cue. Now …
- 6:51 PM Ticket #1652 (Allow depth cue on unlit meshes) closed by
- fixed: Fixed. Unlit meshes now have depth cue.
- 5:31 PM Ticket #3602 (Crash drawing Qt interface) created by
- […]
- 5:00 PM Ticket #3226 (Make mesh surfaces not cast shadows) closed by
- fixed: Fixed. Meshes no longer cast shadows (single or ambient) by default. …
- 4:53 PM Ticket #1243 (Allow ambient shadowing on transparent surfaces) closed by
- fixed: There are settings to control this. The command "material …
- 4:47 PM Ticket #1748 (Extend solid rendering brightness curve) closed by
- fixed: The brightness curve was made to automatically extend to the right …
- 2:12 PM Ticket #3601 (_show_selected_unparameterised_residue: not enough values to unpack) created by
- […]
- 2:08 PM Ticket #3600 (Closing Toolshed browser window corrupts download) created by
- […]
- 1:29 PM Ticket #975 (Add "select" option to hbonds command) closed by
- fixed: Okay, added the option to the GUI as suggested.
- 12:52 PM Ticket #3599 (Sequence: 'Alignment' object has no attribute '_headers') created by
- […]
- 11:22 AM Ticket #3598 (make install of bundle gives "No bundles were installed") created by
- […]
- 11:02 AM Ticket #3597 (Can't install bundles with circular dependencies) created by
- […]
- 9:16 AM Ticket #3596 (Implement Coulombic surface coloring) created by
- As per summary, also optionally generate a volume data set
- 8:39 AM Ticket #3595 (commas in hierarchy parsing) closed by
- not a bug: Hi Tristan, That is just how hierarchy atom spec paring works. …
- 7:47 AM Ticket #3595 (commas in hierarchy parsing) created by
- […]
Aug 4, 2020:
- 6:54 PM Ticket #2166 (Don't cap clipped volume meshes) closed by
- fixed: Fixed. I made mesh style surfaces not show clip caps for all models. …
- 4:37 PM Ticket #3594 (hiding model with distance measurement leaves distance label displayed) closed by
- fixed: Fixed. Labels on pseudobonds did not notice when the structure(s) …
- 3:31 PM Ticket #3594 (hiding model with distance measurement leaves distance label displayed) created by
- Example: open 1zik show :tyr dist @oh hide #1 models This is a …
- 2:15 PM Ticket #3515 (Fetch biological assemblies from PDB for NIH 3D) closed by
- fixed
- 11:22 AM Ticket #3593 (stepper.step_forward: index is out of bounds) created by
- […]
- 10:42 AM Ticket #3592 (Template mismatch errors) closed by
- fixed: Had a quick look at Kartik's coordinates. All of the issues in the …
- 8:39 AM Ticket #3592 (Template mismatch errors) created by
- […]
Aug 3, 2020:
- 10:36 PM Ticket #3501 (Problem saving map: No such file or directory) closed by
- can't reproduce: If this os.getcwd() error is reported again I'll add some code on …
- 10:29 PM Ticket #3521 (Many graphics errors) closed by
- fixed: I have a new theory about this error. It is hard to get an out of …
- 10:07 PM Ticket #3503 (Main graphics not shown when window maximized) closed by
- can't reproduce: No response from reporter.
- 9:55 PM Ticket #3478 (Could not get OpenGL vendor string) closed by
- fixed: Made OpenGL code not give further errors after reporting that the …
- 4:16 PM Ticket #3581 (Label position asked for before label drawn (and various other errors)) closed by
- fixed: Fixed. The mouse mode for moving a 2D label gave an error when some …
- 4:05 PM Ticket #3591 (ImportError: cannot import name 'normalize_vector' from 'chimerax.core') closed by
- fixed: Fixed. Wrong import statements used when running shape ribbon with …
- 3:31 PM Ticket #3584 (Spurious H added to nucleic P) closed by
- fixed
- 3:01 PM Ticket #3591 (ImportError: cannot import name 'normalize_vector' from 'chimerax.core') created by
- […]
- 2:19 PM Ticket #3589 (Saving instance in session) closed by
- not a bug: For this case, you need to inherit from chimerax.state.StateManager …
- 1:54 PM Ticket #3587 (Leave hydrogens intact if atom modification impossible) closed by
- fixed
- 1:41 PM Ticket #3590 (Upcoming template-synonym change) created by
- […]
- 12:03 PM Ticket #3588 (Remove deleted files from app) closed by
- not a bug
- 11:02 AM Ticket #3579 (Crash rendering QML scene graph) closed by
- can't reproduce: Another "QML-based" crash -- no idea.
- 10:49 AM Ticket #3577 (ChimeraX Display Problem on Windows 10 for Ryan Talbot) closed by
- can't reproduce: Hi Ryan, Please upgrade to the 1.0 release of ChimeraX. It has …
- 10:46 AM Ticket #3563 (Timeout launching Modeller job) closed by
- fixed: The web services are up now. --Eric
- 10:34 AM Ticket #3589 (Saving instance in session) created by
- […]
- 4:51 AM Ticket #3588 (Remove deleted files from app) created by
- […]
- 4:07 AM Ticket #3587 (Leave hydrogens intact if atom modification impossible) created by
- […]
Aug 2, 2020:
- 9:09 AM Ticket #3586 (Automatic log compacting) created by
- […]
- 8:25 AM Ticket #3585 (AddH: unusual positioning) created by
- […] rna_weird_h.jpg
- 7:14 AM Ticket #3584 (Spurious H added to nucleic P) created by
- […]
- 2:31 AM Ticket #3583 (Better feedback for loading CIF templates) created by
- […] elbow.D3R_cif.001.cif
Aug 1, 2020:
- 10:48 PM Ticket #3582 (--offscreen does not work on Linux (or Mac, or Windows)) created by
- […] generate.V1.py
- 2:15 PM ChangeLog edited by
- (diff)
- 12:24 PM Ticket #3581 (Label position asked for before label drawn (and various other errors)) created by
- […]
- 10:16 AM Ticket #3580 (Toolshed uninstall: permission denied: install-timestamp) created by
- […]
- 3:48 AM Ticket #3579 (Crash rendering QML scene graph) created by
- […]
Jul 31, 2020:
- 8:59 PM Ticket #3570 (Morph mismatches protein glycans) closed by
- fixed: Fixed. I investigated how morph is messing up the glycans. According …
- 7:37 PM Ticket #3578 (Clipper: failure in French&Wilson treatment of intensities) created by
- […]
- 6:50 PM Ticket #3573 (Web services down) closed by
- fixed: Hi Meghan, Web services should be working again. --Eric Eric …
- 11:50 AM Ticket #3577 (ChimeraX Display Problem on Windows 10 for Ryan Talbot) created by
- […]
- 11:49 AM Ticket #3576 (Shape tube command color option gives error) closed by
- fixed: Fixed. The usual "if numpy-arrary then" error. Bad, bad numpy.
- 11:34 AM Ticket #3576 (Shape tube command color option gives error) created by
- […]
- 10:14 AM Ticket #3575 (Make format_name optional in bundle_info.xml database fetch provider tag) created by
- The format_name provider tag attribute for fetching database files …
- 9:27 AM Ticket #3574 (Web services down) closed by
- duplicate: Same as the other ticket -- web services unavailable outside UCSF
- 9:20 AM Ticket #3572 (Saving gltf: IndexError: tuple index out of range) closed by
- fixed: Fixed. If any model was undisplayed the saving GLTF format gave this …
- 6:44 AM Ticket #3574 (Web services down) created by
- […]
- 6:44 AM Ticket #3573 (Web services down) created by
- […]
- 6:09 AM Ticket #3572 (Saving gltf: IndexError: tuple index out of range) created by
- […]
- 2:52 AM Ticket #3571 (Periodic cache purging?) created by
- […]
- 1:58 AM Ticket #3568 (OpenCL problem?) closed by
- duplicate: Addressed this in #3566 before reading this one.
Jul 30, 2020:
- 11:56 PM Ticket #3565 (Nucleotides: asking for distance from None) closed by
- duplicate: Same solution as before. Update to ChimeraX 1.0 and this bug will go away.
- 11:53 PM Ticket #3564 (mmcif.find_template_residue() sometimes mistakenly claims template ...) closed by
- fixed: You should expect it to fail sometimes. If the network is slow, then …
- 7:59 PM Ticket #3570 (Morph mismatches protein glycans) created by
- The glycans fly all over the place when morphing between these two …
- 1:59 PM Ticket #3481 (scipy can't import _uarray) closed by
- can't reproduce: This should have been fixed by the newer Visual Studio runtime that …
- 1:41 PM Ticket #3567 (scipy can't import _uarray) closed by
- duplicate: duplicate of #3214 (but see #3481)
- 1:36 PM Ticket #3569 (Problem reading MTZ data: list index out of range) created by
- […]
- 11:55 AM Ticket #3568 (OpenCL problem?) created by
- […]
- 11:23 AM Ticket #3567 (scipy can't import _uarray) created by
- […]
- 11:06 AM Ticket #3566 (OpenMM: No template found for residue) created by
- […]
- 5:38 AM Ticket #3565 (Nucleotides: asking for distance from None) created by
- […]
- 4:05 AM Ticket #3564 (mmcif.find_template_residue() sometimes mistakenly claims template ...) created by
- […]
- 2:03 AM Ticket #3563 (Timeout launching Modeller job) created by
- […]
- 1:10 AM Ticket #3562 ('OpenMM_Thread_Handler' object has no attribute '_c_pointer') created by
- […]
Jul 29, 2020:
- 4:42 PM ChangeLog edited by
- (diff)
- 1:55 PM ChangeLog edited by
- (diff)
- 1:13 PM Ticket #3561 (An invalid name request was made. The name requested cannot be ...) created by
- […]
- 9:47 AM Ticket #3559 (Map fitting: map is None) closed by
- fixed: Fixed. Fit map panel was set to report new correlation values as user …
- 7:01 AM Ticket #3560 (figure 8 camera motion) created by
- […]
Jul 28, 2020:
- 10:34 PM Ticket #3559 (Map fitting: map is None) created by
- […]
- 2:40 PM Ticket #3558 (Session restore: Tried to add model with the same id as another model) created by
- […]
- 11:11 AM Ticket #3555 (Calvacade of GL errors) closed by
- nonchimerax: Framebuffer creation failed. Broken graphics driver. I added code to …
- 10:47 AM ChangeLog edited by
- (diff)
- 8:44 AM Ticket #3557 (Open DICOM via icon: 'MainWindow' object has no attribute 'folder_open_cb') closed by
- duplicate
- 3:25 AM Ticket #3557 (Open DICOM via icon: 'MainWindow' object has no attribute 'folder_open_cb') created by
- […]
- 3:13 AM Ticket #3556 (A problem starting chimerax on Centos7) created by
- […]
Jul 27, 2020:
- 10:12 PM Ticket #3555 (Calvacade of GL errors) created by
- […]
- 7:09 PM Ticket #725 (RFE: allow models to be immune to clipping) closed by
- fixed: Made drag select on clip disabled models work.
- 6:18 PM Ticket #3554 (Update clip caps only when changed so coloring is preserved) created by
- On Jul 27, 2020, at 4:57 PM, Tom Goddard <goddard@…> wrote: …
- 4:00 PM ChangeLog edited by
- (diff)
- 3:43 PM Ticket #3386 (Make header values available as residue attributes) closed by
- fixed: As of tomorrow's build, alignment headers create residue attributes.
- 11:54 AM Ticket #3551 (PromoteAtomSelection._structure is deleted) closed by
- fixed: Fixed. Selection demotion was not checking for deleted structures.
- 11:22 AM Ticket #3550 (Problem saving spin movie / images to "Desktop" (C:\Users\Public\Desktop)) closed by
- not a bug: Saving an image with toolbar snapshot button fails, unable to write to …
- 10:44 AM Ticket #3546 (Save spin movie to desktop: Operation not permitted) closed by
- nonchimerax: Appears you denied permission for ChimeraX to access your Desktop so …
- 10:07 AM Ticket #3553 (FileNotFoundError: os.getcwd() opening recent file on macOS without ...) closed by
- fixed
- 10:03 AM Ticket #3553 (FileNotFoundError: os.getcwd() opening recent file on macOS without ...) created by
- […]
- 10:02 AM Ticket #3549 (Old save-map GUI: 'NoneType' object has no attribute 'id_string') closed by
- fixed: Hi Munmun, This problem is fixed in the ChimeraX 1.0 release. If you …
- 9:21 AM Ticket #3552 ("Install" button needs feedback; downloads slow) created by
- […]
- 6:03 AM Ticket #3551 (PromoteAtomSelection._structure is deleted) created by
- […]
- 5:56 AM Ticket #3550 (Problem saving spin movie / images to "Desktop" (C:\Users\Public\Desktop)) created by
- […]
Jul 26, 2020:
- 12:02 AM Ticket #3549 (Old save-map GUI: 'NoneType' object has no attribute 'id_string') created by
- […]
Jul 25, 2020:
- 1:10 PM Ticket #3548 (Nightly build test errors not reported on Linux) created by
- Appears that nightly build test suite errors are not reported on …
- 12:15 AM Ticket #3397 (ChimeraX: mmcif connectivity lost in some chains; OK in Coot  + PDB ...) closed by
- fixed: GDP isn't broken. GDP's type is "RNA linking", ie., a polymeric …
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