Opened 5 years ago
Last modified 5 years ago
#3590 assigned enhancement
Upcoming template-synonym change
Reported by: | Tristan Croll | Owned by: | Greg Couch |
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Priority: | normal | Milestone: | |
Component: | Input/Output | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Linux-3.10.0-1127.13.1.el7.x86_64-x86_64-with-centos-7.8.2003-Core ChimeraX Version: 1.0 (2020-06-04 23:15:07 UTC) Description Eric's comment on #3571 just reminded me: there is an upcoming change to the mmCIF template format that might be of interest (https://www.wwpdb.org/news/news#5f17634f0b582626e650e48b). Short version is that _chem_comp.pdbx_synonyms is being phased out, and replaced with a new data category _pdbx_chem_comp_synonyms. Might be quite useful to capture those - in many cases the main name of the template is some unreadable IUPAC monstrosity, whereas the common name is in the list of synonyms. Might be neat to choose the shortest name out of the main name and synonyms for display purposes. Log: UCSF ChimeraX version: 1.0 (2020-06-04) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 3.3.0 NVIDIA 450.51.05 OpenGL renderer: TITAN Xp/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Manufacturer: Dell Inc. Model: Precision T5600 OS: CentOS Linux 7 Core Architecture: 64bit ELF CPU: 32 Intel(R) Xeon(R) CPU E5-2687W 0 @ 3.10GHz Cache Size: 20480 KB Memory: total used free shared buff/cache available Mem: 62G 15G 32G 283M 14G 46G Swap: 4.9G 0B 4.9G Graphics: 03:00.0 VGA compatible controller [0300]: NVIDIA Corporation GP102 [TITAN Xp] [10de:1b02] (rev a1) Subsystem: NVIDIA Corporation Device [10de:11df] Kernel driver in use: nvidia PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.8
Change History (1)
comment:1 by , 5 years ago
Component: | Unassigned → Input/Output |
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Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → assigned |
Summary: | ChimeraX bug report submission → Upcoming template-synonym change |
Type: | defect → enhancement |
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