Opened 5 years ago
Closed 5 years ago
#3608 closed defect (duplicate)
wrapped C/C++ object of type SaveOptionsWidget has been deleted
Reported by: | Owned by: | Eric Pettersen | |
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Priority: | normal | Milestone: | |
Component: | Input/Output | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Windows-10-10.0.18362 ChimeraX Version: 1.0 (2020-05-08) Description (Describe the actions that caused this problem to occur here) Log: UCSF ChimeraX version: 1.0rc202005080235 (2020-05-08) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open C:/Users/Uma/Downloads/cryosparc_P4_J507_class_00_00142_volume.mrc Opened cryosparc_P4_J507_class_00_00142_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.554, step 1, values float32 > vop zflip #1 > volume zflip #1 Expected a density maps specifier or a keyword > volume #1 level 0.4978 > zflip #1 Unknown command: zflip #1 > vop z flip #1 > volume zone flip #1 Missing or invalid "volumes" argument: invalid density maps specifier > select #1 2 models selected > hide #!1 models > open C:/Users/Uma/Downloads/cs_P507_class00_00142_volume_zflipped.mrc Opened cs_P507_class00_00142_volume_zflipped.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.6, step 1, values float32 > hide #!2 models > open C:/Users/Uma/Downloads/J507_class0_zflipped_corr.mrc Opened J507_class0_zflipped_corr.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.554, step 1, values float32 > volume #3 level 0.481 > toolshed show "Color Actions" > set bgColor white > lighting soft > lighting simple > vop gaussian #3 sdev 6.39 > undo > hide #!4 models > hide #!2 models > show #!4 models > hide #!4 models > show #!3 models > volume #3 level 0.4517 > save C:\Users\Uma\Desktop\image1.png supersample 3 > save C:\Users\Uma\Desktop\image2.png supersample 3 > hide #!3 models > open C:/Users/Uma/Downloads/J507_class01_00142_zflippedcorr.mrc Opened J507_class01_00142_zflippedcorr.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.6, step 1, values float32 > save C:\Users\Uma\Desktop\image3.png supersample 3 > save C:\Users\Uma\Desktop\image4.png supersample 3 > hide #!5 models > open C:/Users/Uma/Downloads/cryosparc_P4_J507_class_02_00142_volume.mrc Opened cryosparc_P4_J507_class_02_00142_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.559, step 1, values float32 > volume #6 level 0.582 > save C:\Users\Uma\Desktop\image5.png supersample 3 > save C:\Users\Uma\Desktop\image6.png supersample 3 > hide #!6 models > open C:/Users/Uma/Downloads/cryosparc_P4_J507_class_03_00142_volume.mrc Opened cryosparc_P4_J507_class_03_00142_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.623, step 1, values float32 > save C:\Users\Uma\Desktop\image7.png supersample 3 > hide #!7 models > open C:/Users/Uma/Downloads/cryosparc_P4_J516_007_volume_map.mrc Opened cryosparc_P4_J516_007_volume_map.mrc, grid size 256,256,256, pixel 1.07, shown at level 0.189, step 1, values float32 > volume #8 level 0.1573 > save C:\Users\Uma\Desktop\image8.png supersample 3 > save C:\Users\Uma\Desktop\image9.png supersample 3 > hide #!8 models > open C:/Users/Uma/Downloads/J521_3dabinit_class00_final_zflipped.mrc Opened J521_3dabinit_class00_final_zflipped.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.593, step 1, values float32 > save C:\Users\Uma\Desktop\image10.png supersample 3 > save C:\Users\Uma\Desktop\image11.png supersample 3 > hide #!9 models > open C:/Users/Uma/Downloads/cryosparc_P4_J521_class_01_final_volume.mrc > C:/Users/Uma/Downloads/J521_class_02_final_zflipped.mrc Opened cryosparc_P4_J521_class_01_final_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.48, step 1, values float32 Opened J521_class_02_final_zflipped.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.576, step 1, values float32 > hide #!10 models > hide #!11 models > show #!10 models > save C:\Users\Uma\Desktop\image12.png supersample 3 > hide #!10 models > show #!11 models > volume #11 level 0.4187 > save C:\Users\Uma\Desktop\image13.png supersample 3 > save C:\Users\Uma\Desktop\image14.png supersample 3 > hide #!11 models > open C:/Users/Uma/Downloads/cryosparc_P1_J628_class_04_00082_volume.mrc > C:/Users/Uma/Downloads/cryosparc_P1_J628_class_03_00082_volume.mrc > C:/Users/Uma/Downloads/cryosparc_P1_J628_class_01_00082_volume.mrc > C:/Users/Uma/Downloads/cryosparc_P1_J628_class_00_00082_volume.mrc > C:/Users/Uma/Downloads/J628_hetref_class02_0082_zflip.mrc Opened cryosparc_P1_J628_class_04_00082_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.617, step 1, values float32 Opened cryosparc_P1_J628_class_03_00082_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.685, step 1, values float32 Opened cryosparc_P1_J628_class_01_00082_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.577, step 1, values float32 Opened cryosparc_P1_J628_class_00_00082_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.613, step 1, values float32 Opened J628_hetref_class02_0082_zflip.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.612, step 1, values float32 > hide #!16 models > hide #!15 models > hide #!14 models > hide #!13 models > hide #!12 models > show #!15 models > save C:\Users\Uma\Desktop\image15.png supersample 3 > hide #!15 models > show #!14 models > volume #14 level 0.499 > save C:\Users\Uma\Desktop\image16.png supersample 3 > save C:\Users\Uma\Desktop\image17.png supersample 3 > hide #!14 models > show #!16 models > volume #16 level 0.4996 > save C:\Users\Uma\Desktop\image18.png supersample 3 > save C:\Users\Uma\Desktop\image19.png supersample 3 > hide #!16 models > show #!13 models > save C:\Users\Uma\Desktop\image20.png supersample 3 > hide #!13 models > show #!12 models > volume #12 level 0.521 > save C:\Users\Uma\Desktop\image21.png supersample 3 > save C:\Users\Uma\Desktop\image22.png supersample 3 > hide #!12 models > open C:/Users/Uma/Downloads/J630_hetref_class_00_zflipped.mrc Opened J630_hetref_class_00_zflipped.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.607, step 1, values float32 > volume #17 level 0.507 > save C:\Users\Uma\Desktop\image23.png supersample 3 > save C:\Users\Uma\Desktop\image24.png supersample 3 > save C:\Users\Uma\Desktop\image25.png supersample 3 > hide #!17 models > open C:/Users/Uma/Downloads/cryosparc_P1_J630_class_01_00082_volume.mrc Opened cryosparc_P1_J630_class_01_00082_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.593, step 1, values float32 > volume #18 level 0.425 > volume #18 level 0.5493 > save C:\Users\Uma\Desktop\image26.png supersample 3 > save C:\Users\Uma\Desktop\image27.png supersample 3 > save C:\Users\Uma\Desktop\image28.png supersample 3 > hide #!18 models > open C:/Users/Uma/Downloads/cryosparc_P1_J630_class_02_00082_volume.mrc Opened cryosparc_P1_J630_class_02_00082_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.565, step 1, values float32 > save C:\Users\Uma\Desktop\image29.png supersample 3 > hide #!19 models > open C:/Users/Uma/Downloads/J630_hetref_class_03_0082_zflip.mrc Opened J630_hetref_class_03_0082_zflip.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.646, step 1, values float32 > volume #20 level 0.6153 > save C:\Users\Uma\Desktop\image30.png supersample 3 > save C:\Users\Uma\Desktop\image31.png supersample 3 > save C:\Users\Uma\Desktop\image32.png supersample 3 > hide #!20 models > open C:/Users/Uma/Downloads/cryosparc_P1_J630_class_04_00082_volume.mrc Opened cryosparc_P1_J630_class_04_00082_volume.mrc, grid size 128,128,128, pixel 2.13, shown at level 0.679, step 1, values float32 > save C:\Users\Uma\Desktop\image33.png supersample 3 Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\ui\gui.py", line 1543, in <lambda> action.triggered.connect(lambda arg, cb = callback: cb()) File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 111, in <lambda> lambda *args, ses=session: show_save_file_dialog(ses), tool_tip="Save output file", File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 122, in show_save_file_dialog _dlg.display(session, **kw) File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 24, in display self._customize_dialog(session, dialog) File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 86, in _customize_dialog self._format_selected(session, dialog) File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 98, in _format_selected self._options_layout.addWidget(self._current_option) RuntimeError: wrapped C/C++ object of type SaveOptionsWidget has been deleted RuntimeError: wrapped C/C++ object of type SaveOptionsWidget has been deleted File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 98, in _format_selected self._options_layout.addWidget(self._current_option) See log for complete Python traceback. Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\ui\gui.py", line 1543, in <lambda> action.triggered.connect(lambda arg, cb = callback: cb()) File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 111, in <lambda> lambda *args, ses=session: show_save_file_dialog(ses), tool_tip="Save output file", File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 122, in show_save_file_dialog _dlg.display(session, **kw) File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 24, in display self._customize_dialog(session, dialog) File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 86, in _customize_dialog self._format_selected(session, dialog) File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 98, in _format_selected self._options_layout.addWidget(self._current_option) RuntimeError: wrapped C/C++ object of type SaveOptionsWidget has been deleted RuntimeError: wrapped C/C++ object of type SaveOptionsWidget has been deleted File "C:\Program Files\ChimeraX 1.0rc202005080235\bin\lib\site- packages\chimerax\save_command\dialog.py", line 98, in _format_selected self._options_layout.addWidget(self._current_option) See log for complete Python traceback. OpenGL version: 3.3.0 NVIDIA 445.87 OpenGL renderer: GeForce GTX 1650/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Manufacturer: Dell Inc. Model: XPS 15 7590 OS: Microsoft Windows 10 Pro (Build 18363) Memory: 8,304,005,120 MaxProcessMemory: 137,438,953,344 CPU: 12 Intel(R) Core(TM) i7-9750H CPU @ 2.60GHz"
Change History (2)
comment:1 by , 5 years ago
Component: | Unassigned → Input/Output |
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Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → accepted |
Summary: | ChimeraX bug report submission → wrapped C/C++ object of type SaveOptionsWidget has been deleted |
comment:2 by , 5 years ago
Resolution: | → duplicate |
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Status: | accepted → closed |
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