Opened 5 years ago

Closed 5 years ago

#3641 closed defect (fixed)

Map grouping/coloring

Reported by: sitins07@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Input/Output Version:
Keywords: Cc: pett
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Windows-10-10.0.19041
ChimeraX Version: 1.0rc202005220559 (2020-05-22 05:59:43 UTC)
Description
Open via GUI is woriking incorrectly. When I open first single map file and then open a set of map files they are opened as a group which is great and each map in this group is colored differently which is also perfect. But when I start a new session and open a multiple selection of maps they are not in the group and they all grey which is very incinvenient and when I open anouther set of maps afterwards they are colored differently but also not grouped. Is it possible to make all multiple selections colored differently and grouped? Thank you!

Log:
UCSF ChimeraX version: 1.0rc202005220559 (2020-05-22)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class001.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class002.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class003.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class004.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class005.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class006.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class007.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class008.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class009.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class010.mrc

Opened run_it025_class001.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.109, step 1, values float32  
Opened run_it025_class002.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.169, step 1, values float32  
Opened run_it025_class003.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.106, step 1, values float32  
Opened run_it025_class004.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.104, step 1, values float32  
Opened run_it025_class005.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.187, step 1, values float32  
Opened run_it025_class006.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.117, step 1, values float32  
Opened run_it025_class007.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0935, step 1, values float32  
Opened run_it025_class008.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0975, step 1, values float32  
Opened run_it025_class009.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.144, step 1, values float32  
Opened run_it025_class010.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0973, step 1, values float32  

> open
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class001.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class002.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class003.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class004.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class005.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class006.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class007.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class008.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class009.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class010.mrc

Opened run_it025_class001.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.109, step 1, values float32  
Opened run_it025_class002.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.169, step 1, values float32  
Opened run_it025_class003.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.106, step 1, values float32  
Opened run_it025_class004.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.104, step 1, values float32  
Opened run_it025_class005.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.187, step 1, values float32  
Opened run_it025_class006.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.117, step 1, values float32  
Opened run_it025_class007.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0935, step 1, values float32  
Opened run_it025_class008.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0975, step 1, values float32  
Opened run_it025_class009.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.144, step 1, values float32  
Opened run_it025_class010.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0973, step 1, values float32  

> open
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class001.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class002.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class003.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class004.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class005.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class006.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class007.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class008.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class009.mrc
> X:/Work/Projects/SARS-2-COVID-19/C64W1/Class3D/80_full/run_it025_class010.mrc

Opened run_it025_class001.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.109, step 1, values float32  
Opened run_it025_class002.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.169, step 1, values float32  
Opened run_it025_class003.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.106, step 1, values float32  
Opened run_it025_class004.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.104, step 1, values float32  
Opened run_it025_class005.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.187, step 1, values float32  
Opened run_it025_class006.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.117, step 1, values float32  
Opened run_it025_class007.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0935, step 1, values float32  
Opened run_it025_class008.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0975, step 1, values float32  
Opened run_it025_class009.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.144, step 1, values float32  
Opened run_it025_class010.mrc, grid size 80,80,80, pixel 4.64, shown at level
0.0973, step 1, values float32  




OpenGL version: 3.3.0 NVIDIA 451.67
OpenGL renderer: GeForce GTX 1070/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: Micro-Star International Co., Ltd.
Model: GE73VR 7RF
OS: Майкрософт Windows 10 Pro (Build 19041)
Memory: 17,059,950,592
MaxProcessMemory: 137,438,953,344
CPU: 8 Intel(R) Core(TM) i7-7700HQ CPU @ 2.80GHz"
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.8

Change History (2)

comment:1 by pett, 5 years ago

Cc: pett added
Component: Unassigned → Input/Output
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → Map grouping/coloring

Hi Valentyn,

I believe that if you use the current daily build, maps opened at the same time will always be grouped. Tom Goddard will get back to you about the coloring issue you mentioned.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab

comment:2 by Tom Goddard, 5 years ago

Resolution: → fixed
Status: assigned → closed

Fixed. Now each map will get a distinct color even when opened with a single command.

When opening more than one map with a single open command or with the File Open dialog they were all colored gray if no models were currently opened. If a model was currently open then the maps each got a distinct color.

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