![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Timeline
May 8, 2025:
- 10:14 PM Ticket #17596 (Crash using open/save dialog) created by
- […]
- 7:05 PM Ticket #17595 (boltz dialog uses "directory" keyword but option is "resultsDirectory") closed by
- fixed: Fixed in 1.10 release and daily build. Oops. I guess I renamed that …
- 6:55 PM Ticket #17595 (boltz dialog uses "directory" keyword but option is "resultsDirectory") created by
- Trying to specify a nondefault directory in the Boltz dialog options …
- 5:34 PM Ticket #17594 (Use a ChimeraX fork of the Boltz github repository to improve Boltz ...) created by
- It might be useful to have ChimeraX Boltz install use a fork of the …
- 5:25 PM Ticket #16868 (AtomicShapeDrawing selection sometimes inaccurate) closed by
- fixed: Shapes added with selected atoms will start out selected
- 5:05 PM Ticket #16558 (Cannot 'pip install pyKVFinger') closed by
- fixed: Works as of some updates from the kvfinder team.
- 5:01 PM Ticket #17549 (Crash opening mmCIF) closed by
- fixed: Went ahead and made changes to make this more robust.
- 4:42 PM Ticket #17524 (Bad version string; slow failure on dependency mismatch) closed by
- fixed: Thank you for investigating/reporting this. I was looking around Plato …
- 4:37 PM Ticket #17357 (pip install failure ("invalid requirement")) closed by
- fixed: I deleted pyKVFinder out of my 1.11 build user site directory and …
- 4:32 PM Ticket #17593 (Boltz 1.0 install fails on Mac) closed by
- fixed: Fixed in 1.10. Pinned Boltz install to use version 0.4.1. Also …
- 4:31 PM Ticket #17578 ("Webservices job finished" message issued prematurely and multiple times) closed by
- fixed: The wrong indentation made this run on every invocation of …
- 4:21 PM Ticket #17593 (Boltz 1.0 install fails on Mac) created by
- […]
- 3:48 PM Ticket #17592 (Crash using menus) created by
- […]
- 3:06 PM Ticket #17591 (Crash on Mac waking from sleep) created by
- […]
- 2:02 PM Ticket #17580 (alphafold pae: JSONDecodeError) closed by
- fixed: Fixed. The user tried to open the alphafold database settings json …
- 1:49 PM Ticket #17590 (Crash in event loop) created by
- […]
- 1:39 PM Ticket #17589 (Crash in chem_group on Windows) created by
- […]
- 12:55 PM Ticket #17588 ('MRCGrid' object has no attribute 'dicom_data') created by
- […]
- 12:10 PM Ticket #17579 (Save movie: No space left on device) closed by
- limitation: While it would be nicer to omit tracebacks and say "out of disk space" …
- 12:02 PM Ticket #17586 (Crash on Mac waking from sleep) closed by
- duplicate
- 12:01 PM Ticket #17585 (Crash moving window between screens) closed by
- duplicate
- 12:01 PM Ticket #17584 (Crash moving window between screens) closed by
- duplicate
- 12:00 PM Ticket #17583 (Crash on Mac waking from sleep) closed by
- duplicate
- 11:52 AM Ticket #17587 (Crash moving window between screens) created by
- […]
- 10:20 AM Ticket #17586 (Crash on Mac waking from sleep) created by
- […]
- 8:28 AM Ticket #17585 (Crash moving window between screens) created by
- […]
- 8:09 AM Ticket #17584 (Crash moving window between screens) created by
- […]
- 7:37 AM Ticket #17583 (Crash on Mac waking from sleep) created by
- […]
- 6:13 AM Ticket #17582 (Problem saving session after adding trajectory coordinates) created by
- […]
- 3:51 AM Ticket #17581 (SEQCROW: 'ArtistList' object has no attribute 'remove') created by
- […]
- 2:36 AM Ticket #17580 (alphafold pae: JSONDecodeError) created by
- […]
May 7, 2025:
- 5:36 PM Ticket #17277 (D-amino acids assigned wrong atom types) closed by
- fixed: Fix: …
- 5:22 PM Ticket #17579 (Save movie: No space left on device) created by
- […]
- 3:50 PM Ticket #17576 (Crash on Mac waking from sleep) closed by
- duplicate
- 3:49 PM Ticket #17575 (Similar Structures / foldseek errors) closed by
- duplicate: These Foldseek errors were fixed in the daily build several months ago.
- 12:11 PM Ticket #17578 ("Webservices job finished" message issued prematurely and multiple times) created by
- […]
- 9:24 AM Ticket #17577 (Crash in event loop) closed by
- can't reproduce
- 9:21 AM Ticket #17574 (Crash destroying OpenGL context on exit) closed by
- duplicate: From before the fix went in
- 9:19 AM Ticket #17571 (Problem restoring StructureSeq from session) closed by
- can't reproduce
- 2:03 AM Ticket #17577 (Crash in event loop) created by
- […]
- 12:30 AM Ticket #5319 (bundle_info.xml needs a doctype) closed by
- wontfix: Moving to pyproject.toml files.
- 12:09 AM Ticket #17576 (Crash on Mac waking from sleep) created by
- […]
May 6, 2025:
- 8:50 PM Ticket #17575 (Similar Structures / foldseek errors) created by
- […]
- 7:50 PM Ticket #17574 (Crash destroying OpenGL context on exit) created by
- […]
- 7:31 PM Ticket #17573 (Make boltz install pytorch with cuda support on Windows with nvidia ...) created by
- Currently the boltz install command will install boltz which has a …
- 7:06 PM Ticket #17572 (Make Boltz use Nvidia GPU on Windows if available) closed by
- fixed: Done. I made the boltz predict command check that torch has cuda …
- 7:02 PM Ticket #17572 (Make Boltz use Nvidia GPU on Windows if available) created by
- If Boltz has torch installed with cuda support and the user has Nvidia …
- 5:50 PM Ticket #17571 (Problem restoring StructureSeq from session) created by
- […]
- 1:34 PM Ticket #17527 (pyproject.toml does not check existence of source files) closed by
- fixed: OK, I updated bundle builder so that if it encounters a glob like …
- 1:20 PM Ticket #17565 (Mac ChimeraX build fails on spacenavigator) closed by
- fixed: You can now put 'optional = true' in [tool.chimerax.extension.foo] …
- 12:51 PM Ticket #17564 (Don't report known crash if no email provided) closed by
- fixed: Fixed in ChimeraX 1.10. If user presses Submit button on bug report …
- 12:46 PM Ticket #17570 (Test of crash reporter with known crash.) closed by
- not a bug: Seems to be working.
- 12:45 PM Ticket #17570 (Test of crash reporter with known crash.) created by
- […]
- 12:44 PM Ticket #17569 (Testing anonymous crash reporting for not-known crash.) closed by
- not a bug
- 12:43 PM Ticket #17568 (Test of crash reporter for known crashes.) closed by
- not a bug
- 12:40 PM Ticket #17567 (Test of crash reporter for known crashes) closed by
- not a bug
- 12:39 PM Ticket #17569 (Testing anonymous crash reporting for not-known crash.) created by
- […]
- 12:29 PM Ticket #17568 (Test of crash reporter for known crashes.) created by
- […]
- 12:24 PM Ticket #17567 (Test of crash reporter for known crashes) created by
- […]
- 12:22 PM Ticket #17566 (Testing crash reporter) closed by
- not a bug
- 12:21 PM Ticket #17566 (Testing crash reporter) created by
- […]
- 11:39 AM Ticket #17563 (Crash moving window between screens) closed by
- duplicate: Duplicate of #17562, same reporter.
- 11:38 AM Ticket #17562 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel explained what we know about this crash …
- 11:34 AM Ticket #17565 (Mac ChimeraX build fails on spacenavigator) created by
- Building ChimeraX on a Mac (make build-from-scratch) now fails if …
- 11:02 AM Ticket #17559 (Graphics hardware encountered an error and was reset) closed by
- duplicate
- 10:59 AM Ticket #17564 (Don't report known crash if no email provided) created by
- In ChimeraX 1.9 we had crash reporter detect known crashes and report …
- 10:55 AM Ticket #17558 (Crash moving window between screens) closed by
- duplicate
- 10:28 AM Ticket #17556 (Crash in Bug Reporter startup: No space left on device) closed by
- limitation: As the messages say "No space left on device". If they don't …
- 10:23 AM Ticket #17563 (Crash moving window between screens) created by
- […]
- 10:01 AM Ticket #17562 (Crash on Mac waking from sleep) created by
- […]
- 9:58 AM Ticket #17561 (blob recognize: user provided file name instead of model ID) created by
- […]
- 6:51 AM Ticket #17560 (QPainter::begin: Paint device returned engine == 0, type: 2) created by
- […]
- 12:59 AM Ticket #17559 (Graphics hardware encountered an error and was reset) created by
- […]
May 5, 2025:
- 11:38 PM Ticket #17558 (Crash moving window between screens) created by
- […]
- 11:16 PM Ticket #15814 (ToolInstance.bundle_info is None) closed by
- fixed: I believe Zach fixed this already.
- 11:14 PM Ticket #17557 (SEQCROW: 'Session' object has no attribute 'log') created by
- […] GDOTHH.xyz
- 11:03 PM Ticket #17556 (Crash in Bug Reporter startup: No space left on device) created by
- […]
- 6:35 PM Ticket #17545 (Ribbon break at PTR) closed by
- fixed: The PDB file was helpful and I have fixed the problem. PDB files …
- 6:31 PM Ticket #17555 (Optimize Boltz predictions for large structures) created by
- Boltz runs out of memory or takes a very long time predicting …
- 5:24 PM Ticket #16547 (Save X3D failure saving 2D labels) closed by
- fixed: Fixed was easier that I expected. It will be in the next daily build.
- 4:55 PM Ticket #17554 (Test crash) closed by
- not a bug: Crash via os.abort() having used open dialog once and save dialog …
- 4:54 PM Ticket #17553 (Test crash) closed by
- not a bug: Crash via os.abort having used open dialog once. Still looks fine.
- 4:53 PM Ticket #17552 (Test crash) closed by
- not a bug: Crashed via os.abort() with no preceding activity -- looks fine.
- 4:48 PM Ticket #17554 (Test crash) created by
- […]
- 4:47 PM Ticket #17553 (Test crash) created by
- […]
- 4:45 PM Ticket #17552 (Test crash) created by
- […]
- 4:30 PM Dev2025-5-5 edited by
- (diff)
- 3:31 PM Ticket #17551 (RFE: label residues with color-coded grid of column prevalences from ...) created by
- Idea is to label residues with color-coded grids like we already have …
- 2:58 PM Dev2025-5-5 edited by
- (diff)
- 2:58 PM Dev2025-5-5 edited by
- (diff)
- 2:56 PM Dev2025-5-5 edited by
- (diff)
- 2:56 PM DeveloperMeetings edited by
- (diff)
- 2:52 PM Ticket #17550 (Improve Boltz structure prediction usability) created by
- I added a Boltz structure prediction tool to ChimeraX described here …
- 2:29 PM Ticket #16690 (Should ChimeraX structure prediction focus on Boltz-1, Chai-1, ...) closed by
- fixed: I made a Boltz-1 prediction tool in ChimeraX that installs Boltz on …
- 2:22 PM Ticket #17548 (Shader errors) closed by
- nonchimerax: Probably a graphics error, although the Windows Error code suggest …
- 2:06 PM Ticket #17547 (Segmentation cursor is None) closed by
- duplicate: Duplicate of #17004
- 2:05 PM Ticket #17546 (Segmentation cursor is None) closed by
- duplicate: Duplicate of #17004
- 12:55 PM Ticket #17542 (Measure center: Array argument has non-numeric values) closed by
- fixed: Fixed. The "measure center #21" command on a map gave this error …
- 11:03 AM Ticket #17549 (Crash opening mmCIF) created by
- […]
- 10:57 AM Ticket #17502 (libtheora is not installable) closed by
- fixed: Updated package requirements for both Ubuntu and Red hat.
- 10:53 AM Ticket #17544 (Bad PDB file) closed by
- not a bug
- 10:51 AM Ticket #17543 (Crash in event loop after "lighting soft") closed by
- can't reproduce
- 10:46 AM Ticket #17541 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:03 AM Ticket #17548 (Shader errors) created by
- […]
- 8:13 AM Ticket #17547 (Segmentation cursor is None) created by
- […]
- 8:13 AM Ticket #17546 (Segmentation cursor is None) created by
- […]
- 6:42 AM Ticket #17545 (Ribbon break at PTR) created by
- […] PTR.png
- 6:25 AM Ticket #17544 (Bad PDB file) created by
- […]
May 4, 2025:
- 11:57 PM Ticket #17543 (Crash in event loop after "lighting soft") created by
- […]
- 1:36 PM Ticket #17542 (Measure center: Array argument has non-numeric values) created by
- […]
May 3, 2025:
May 2, 2025:
- 5:39 PM Ticket #17540 (Crash accessing StructureSeq.structure) closed by
- duplicate: Duplicate of #17013
- 5:19 PM Ticket #17539 (Crash in event loop under remote control) closed by
- can't reproduce
- 5:15 PM Ticket #17540 (Crash accessing StructureSeq.structure) created by
- […]
- 2:29 PM Ticket #17539 (Crash in event loop under remote control) created by
- […]
- 2:27 PM DeveloperMeetings edited by
- (diff)
- 11:46 AM Ticket #17538 (Crash using open/save dialog) closed by
- can't reproduce
- 10:51 AM Ticket #17538 (Crash using open/save dialog) created by
- […]
- 9:10 AM Ticket #17537 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:03 AM Ticket #17536 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: using pyKVFinder 0.7.1
- 8:58 AM Ticket #17535 (Crash destroying OpenGL context on exit) closed by
- duplicate: 1.7.1, but still conceivably fixed by that same change
- 8:55 AM Ticket #17534 (Crash destroying OpenGL context on exit) closed by
- duplicate: From before the fix for this went in.
- 8:52 AM Ticket #17533 (Crash on Mac waking from sleep) closed by
- duplicate
- 8:50 AM Ticket #17532 (Crash de-iconifying from dock) closed by
- can't reproduce
- 6:56 AM Ticket #17537 (Crash on Mac waking from sleep) created by
- […]
- 5:44 AM Ticket #17536 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 2:23 AM Ticket #17535 (Crash destroying OpenGL context on exit) created by
- […]
- 1:28 AM Ticket #17534 (Crash destroying OpenGL context on exit) created by
- […]
May 1, 2025:
- 9:57 PM Ticket #17533 (Crash on Mac waking from sleep) created by
- […]
- 7:54 PM Ticket #17532 (Crash de-iconifying from dock) created by
- […]
- 5:48 PM Ticket #17529 (Qt thread/timer crash after (much) earlier Boltz error) closed by
- can't reproduce: The crash looks unrelated to Boltz and is caused by use of Qt in a …
- 5:09 PM Ticket #17531 (Crash moving window between screens) closed by
- duplicate: This ChimeraX crash is from a Qt window toolkit bug on Mac with …
- 4:55 PM Ticket #17530 (glViewport: invalid enumerant) closed by
- nonchimerax: Defective graphics. The same user reported this yesterday.
- 4:26 PM Ticket #17528 (Crash on Mac waking from sleep) closed by
- duplicate
- 4:13 PM Ticket #17525 (Crash in Qt event loop after opening EMDB entry) closed by
- can't reproduce: No indication of why it crashed.
- 4:11 PM Ticket #17520 (cartoon style #1 worm true) closed by
- fixed: Fixed. The worm option (true or false) to the cartoon style command …
- 4:01 PM Ticket #17523 (Similar Structures: self.results is None) closed by
- duplicate: Duplicate of #16698
- 1:46 PM Ticket #17531 (Crash moving window between screens) created by
- […]
- 1:26 PM Ticket #17522 ("graphics quality" → out of memory) closed by
- limitation: Your graphics quality command requests 750 bond triangles, ribbon …
- 12:00 PM Ticket #17530 (glViewport: invalid enumerant) created by
- […]
- 11:33 AM Ticket #17529 (Qt thread/timer crash after (much) earlier Boltz error) created by
- […]
- 11:00 AM Ticket #17521 (Crash showing status) closed by
- can't reproduce: Version 1.3 (release candidate even!)
- 9:34 AM Ticket #17528 (Crash on Mac waking from sleep) created by
- […]
- 7:23 AM Ticket #17527 (pyproject.toml does not check existence of source files) created by
- […]
- 6:54 AM Ticket #17526 (MemoryError/XMLSyntaxError opening session files) created by
- […]
- 6:43 AM Ticket #17525 (Crash in Qt event loop after opening EMDB entry) created by
- […]
- 6:35 AM Ticket #17524 (Bad version string; slow failure on dependency mismatch) created by
- […] pyproject.toml
- 1:43 AM Ticket #17523 (Similar Structures: self.results is None) created by
- […]
- 12:36 AM Ticket #17522 ("graphics quality" → out of memory) created by
- […]
Apr 30, 2025:
- 10:05 PM Ticket #17521 (Crash showing status) created by
- […]
- 6:38 PM Ticket #17520 (cartoon style #1 worm true) created by
- […]
- 10:03 AM Ticket #17514 (Crash opening mmCIF) closed by
- duplicate: Fixed in daily build.
- 9:59 AM Ticket #17500 (Crash in chem_group on Windows) closed by
- fixed: I'm glad to hear that the latest version works for you. --Eric
- 9:57 AM Ticket #17366 (ChimeraX1.9 problem) closed by
- fixed: That's great! --Eric
- 9:39 AM Ticket #17518 (Graphics hardware encountered an error and was reset) closed by
- duplicate
- 9:38 AM Ticket #17517 (Crash at startup) closed by
- can't reproduce: Looks like remote display
- 9:37 AM Ticket #17516 (Crash using open/save dialog) closed by
- can't reproduce
- 9:23 AM Ticket #17515 (Error setting cavity color) closed by
- duplicate: Duplicate of #16362
- 8:03 AM Ticket #17519 (Show non-amino/nucleic chains initially) created by
- […]
- 5:32 AM Ticket #17518 (Graphics hardware encountered an error and was reset) created by
- […]
Apr 29, 2025:
- 10:44 PM Ticket #17517 (Crash at startup) created by
- […]
- 4:44 PM Ticket #17516 (Crash using open/save dialog) created by
- […]
- 2:37 PM ChangeLog edited by
- (diff)
- 1:35 PM Ticket #17515 (Error setting cavity color) created by
- […]
- 1:23 PM ChangeLog edited by
- (diff)
- 1:21 PM Ticket #17514 (Crash opening mmCIF) created by
- […] output.cif
- 11:27 AM Ticket #17513 (glClearColor: invalid enumerant) closed by
- nonchimerax: ChimeraX is not working on your laptop because the graphics driver has …
- 10:37 AM Ticket #17513 (glClearColor: invalid enumerant) created by
- […]
- 10:23 AM Ticket #17508 (Crash restoring "xr true" session) closed by
- duplicate: Duplicate of #17507
- 10:14 AM 2025-5-1 created by
- 10:13 AM Dev2025-5-5 created by
- 10:12 AM Dev2025-4-28 edited by
- (diff)
- 10:11 AM DeveloperMeetings edited by
- (diff)
- 10:09 AM 2025-4-24 edited by
- (diff)
- 10:06 AM Dev2025-4-28 edited by
- (diff)
- 9:29 AM Ticket #17512 (Crash moving window between screens) closed by
- duplicate
- 9:28 AM Ticket #17511 (Crash in event loop) closed by
- can't reproduce
- 9:26 AM Ticket #17509 (Graphics hardware encountered an error and was reset) closed by
- duplicate
- 9:16 AM Ticket #17505 (Crash saving PDB file) closed by
- can't reproduce
- 7:43 AM Ticket #17512 (Crash moving window between screens) created by
- […]
- 2:04 AM Ticket #17511 (Crash in event loop) created by
- […]
Apr 28, 2025:
- 11:51 PM Ticket #17510 (Handle Boltz prediction out of memory) closed by
- fixed: Fixed. Added error message when "ran out of memory" detected in stdout.
- 11:06 PM Ticket #17510 (Handle Boltz prediction out of memory) created by
- […]
- 8:14 PM Ticket #17509 (Graphics hardware encountered an error and was reset) created by
- […]
- 7:35 PM Ticket #17508 (Crash restoring "xr true" session) created by
- […]
- 7:31 PM Ticket #17507 (Restoring "xr true" session: SessionNotRunningError) created by
- […]
- 5:11 PM Ticket #17506 ("devel build" run twice, crashes) created by
- […]
- 3:47 PM Ticket #17505 (Crash saving PDB file) created by
- […]
- 12:11 PM Ticket #17504 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Hi Mike, The KVFinder authors just released a new version of the …
- 12:06 PM Ticket #17304 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- fixed: The KVFinder authors just released a new version of the pyKVFinder …
- 12:04 PM Ticket #17504 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 11:36 AM Ticket #17503 (glClear failure) closed by
- can't reproduce: glClear() on the status line fails on startup during an expose event. …
- 11:33 AM Ticket #17481 (Boltz: process_chem_name() arg is None) closed by
- fixed: Fixed. Showing Boltz gui with PDB file opened that has no chain …
- 11:30 AM Dev2025-4-28 edited by
- (diff)
- 11:25 AM Ticket #17486 (VR: CompositorError_TextureUsesUnsupportedFormat) closed by
- can't reproduce: I suspect this errors is from SteamVR not being connected to a headset.
- 11:24 AM Ticket #17501 (Crash in garbage collection) closed by
- duplicate
- 11:18 AM Ticket #17499 (Crash destroying the widgets of a tool or dialog) closed by
- can't reproduce
- 11:15 AM Ticket #17498 (Crash in QListWidgetitem.text()) closed by
- can't reproduce: ...or possibly in QListWidget.selectedItems()
- 10:48 AM Ticket #17497 (flip_matrix: 'NoneType' object is not subscriptable) closed by
- duplicate: Duplicate of #17378
- 10:46 AM Ticket #17496 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:37 AM Ticket #17494 (Crash destroying OpenGL context on exit) closed by
- duplicate: Duplicate of #17265; this version predates the workaround
- 10:34 AM Ticket #17492 (Inadequate OpenGL) closed by
- not a bug
- 10:32 AM Ticket #17491 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Duplicate of #17304
- 10:31 AM Ticket #17490 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:18 AM Ticket #17488 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Duplicate of #17304
- 10:17 AM Ticket #17487 (Crash on Mac waking from sleep) closed by
- duplicate: 6.8.1, not 6.8.2
- 10:10 AM Ticket #17485 (Crash at startup / in event loop) closed by
- can't reproduce: Also looks like remote display
- 10:08 AM Ticket #17484 (Crash at startup / in event loop) closed by
- can't reproduce: Looks like remote display
- 10:07 AM Ticket #17483 (Crash issuing warning while reading PDB file) closed by
- can't reproduce
- 10:01 AM Ticket #17482 (Crash at startup / in event loop) closed by
- can't reproduce
- 9:10 AM Ticket #17503 (glClear failure) created by
- […]
- 6:40 AM Ticket #17502 (libtheora is not installable) created by
- […] daily-install.out
- 6:13 AM Ticket #17501 (Crash in garbage collection) created by
- […]
- 5:52 AM Ticket #17500 (Crash in chem_group on Windows) created by
- […]
- 2:41 AM Ticket #17499 (Crash destroying the widgets of a tool or dialog) created by
- […]
- 1:56 AM Ticket #17498 (Crash in QListWidgetitem.text()) created by
- […]
- 12:44 AM Ticket #17371 (Crash in ExtractMolecule::connect_residue_by_template) closed by
- fixed: Don't connect residues by template if all atoms are already bonded.
Apr 27, 2025:
- 10:38 PM Ticket #17497 (flip_matrix: 'NoneType' object is not subscriptable) created by
- […]
- 10:02 PM Ticket #17496 (Crash on Mac waking from sleep) created by
- […]
- 8:43 PM Ticket #17495 (Read ORCA output: first arg of complex() is None) created by
- […]
- 8:16 PM Ticket #17494 (Crash destroying OpenGL context on exit) created by
- […]
- 8:11 AM Ticket #17493 (isolde start sim: RuntimeError: clEnqueueReadBuffer) created by
- […]
- 6:50 AM Ticket #17492 (Inadequate OpenGL) created by
- […]
- 1:27 AM Ticket #17491 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 1:26 AM Ticket #17490 (Crash on Mac waking from sleep) created by
- […]
Apr 26, 2025:
- 8:10 PM Ticket #17489 (ArtiaX: save particle list: KeyError: 'rlnTomoName') created by
- […]
- 1:58 AM Ticket #17488 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
Apr 25, 2025:
- 3:56 PM Ticket #17487 (Crash on Mac waking from sleep) created by
- […]
- 2:50 PM Ticket #17486 (VR: CompositorError_TextureUsesUnsupportedFormat) created by
- […]
- 1:05 PM Ticket #17485 (Crash at startup / in event loop) created by
- […]
- 10:54 AM Ticket #14761 (Crash opening mmCIF file) closed by
- fixed: Thanks again for the wonderfully bad mmCIF files. In addition to the …
- 10:11 AM Ticket #17484 (Crash at startup / in event loop) created by
- […]
- 4:02 AM Ticket #17483 (Crash issuing warning while reading PDB file) created by
- […]
- 2:54 AM Ticket #17482 (Crash at startup / in event loop) created by
- […]
Apr 24, 2025:
- 9:02 PM Ticket #17481 (Boltz: process_chem_name() arg is None) created by
- […]
- 5:32 PM Ticket #17422 (Error setting cavity color) closed by
- duplicate: Duplicate of #16362
- 3:16 PM Ticket #17252 (Remove "computing secondary structure" log output from matchmaker) closed by
- fixed: The message is no longer output if the secondary structure is being …
- 2:08 PM Ticket #17480 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel explained what we know about this bug: …
- 1:12 PM Ticket #17479 (Crash on Mac waking from sleep) closed by
- duplicate
- 1:01 PM Ticket #17480 (Crash on Mac waking from sleep) created by
- […]
- 11:36 AM Ticket #17479 (Crash on Mac waking from sleep) created by
- […]
- 10:53 AM Ticket #17478 (Crash moving window between screens) closed by
- duplicate: The ChimeraX bug report panel explained what we know about this crash: …
- 10:42 AM Ticket #17477 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:41 AM Ticket #17476 (Molecular Dynamics Viewer: list index out of range) closed by
- limitation: Hi Yossef, The Molecular Dynamics Viewer plugin can only handle a …
- 10:32 AM DeveloperMeetings edited by
- Small editing tweeks (diff)
- 10:26 AM Ticket #17475 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:25 AM Ticket #17474 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:24 AM Ticket #17473 (Modeller update sequence menus: list.remove(x): x not in list) closed by
- can't reproduce: It would seem like the only way for this to happen is if the sequence …
- 10:24 AM DeveloperMeetings edited by
- Add placeholder for Greg's 4/3/25 presentation (diff)
- 10:16 AM 2025-2-20 edited by
- Create link to Greg's slides (diff)
- 8:16 AM Ticket #17478 (Crash moving window between screens) created by
- […]
- 1:29 AM Ticket #17477 (Crash on Mac waking from sleep) created by
- […]
- 12:50 AM Ticket #17476 (Molecular Dynamics Viewer: list index out of range) created by
- […]
- 12:17 AM Ticket #17475 (Crash on Mac waking from sleep) created by
- […]
Apr 23, 2025:
- 11:18 PM Ticket #17474 (Crash on Mac waking from sleep) created by
- […]
- 6:58 PM Ticket #17473 (Modeller update sequence menus: list.remove(x): x not in list) created by
- […]
- 5:52 PM Ticket #17472 (Crash on Mac waking from sleep) closed by
- duplicate
- 5:18 PM Ticket #17472 (Crash on Mac waking from sleep) created by
- […]
- 2:06 PM 2025-4-24 edited by
- (diff)
- 1:17 PM Ticket #17265 (Crash destroying OpenGL context on exit) closed by
- fixed: Fixed. I put in a work-around to avoid this crash on exit on Mac in …
- 12:13 PM Ticket #17471 (Crash moving window between screens) closed by
- duplicate: The ChimeraX bug report dialog explained (in red text) what we know …
- 11:51 AM Ticket #17470 (Crash at exit) closed by
- duplicate
- 11:45 AM Ticket #17460 (glDrawBuffer: invalid operation) closed by
- can't reproduce: Have seen this glDrawBuffer(GL_BACK) error a few dozen times over the …
- 11:37 AM Ticket #17468 (Alt-tab → crash) closed by
- can't reproduce
- 11:30 AM Ticket #17467 (Crash showing command-history dialog) closed by
- can't reproduce: The command history does come up tiny though. Will have to look into …
- 10:41 AM Ticket #17471 (Crash moving window between screens) created by
- […]
- 10:04 AM Ticket #17470 (Crash at exit) created by
- […]
- 9:59 AM Ticket #17466 (GTP N3) closed by
- limitation: Hi Owen, Thanks for reporting this problem. It seems that ChimeraX …
- 9:40 AM Ticket #17469 (Offer to stop long-running tasks) created by
- […]
- 9:25 AM Ticket #17464 (Unknown crash) closed by
- can't reproduce: 1.2.5
- 9:24 AM Ticket #17463 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:22 AM Ticket #17462 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:21 AM Ticket #17461 (Crash executing a command) closed by
- can't reproduce: Also remote display
- 9:19 AM Ticket #17459 (Crash executing a command) closed by
- can't reproduce: Wasn't the last command in the log AFAICT from trying to reproduce it.
- 6:40 AM Ticket #17468 (Alt-tab → crash) created by
- […]
- 6:11 AM Ticket #17467 (Crash showing command-history dialog) created by
- […]
- 6:03 AM Ticket #17466 (GTP N3) created by
- […]
- 5:39 AM Ticket #17465 (PermissionError writing temp file) created by
- […]
- 5:36 AM Ticket #17464 (Unknown crash) created by
- […]
- 2:52 AM Ticket #17463 (Crash on Mac waking from sleep) created by
- […]
Apr 22, 2025:
- 7:22 PM Ticket #17462 (Crash on Mac waking from sleep) created by
- […]
- 1:11 PM 2025-4-24 created by
- 1:09 PM Dev2025-4-28 created by
- 1:08 PM DeveloperMeetings edited by
- (diff)
- 12:53 PM Ticket #17461 (Crash executing a command) created by
- […]
- 12:52 PM Ticket #17460 (glDrawBuffer: invalid operation) created by
- […]
- 12:52 PM Ticket #17459 (Crash executing a command) created by
- […]
- 12:47 PM Ticket #17458 (QRhiGles2: Failed to make context current) closed by
- can't reproduce: The QRhiGles2 error is from Qt which is failing in using OpenGL. I …
- 11:29 AM Ticket #17458 (QRhiGles2: Failed to make context current) created by
- […]
- 11:01 AM Ticket #17455 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel explained what we know about this crash …
- 10:35 AM Ticket #17457 (More prominent "supersedes" info) created by
- If it's a pain to implement, however, it may not be worth doing. …
- 10:27 AM Ticket #17456 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:24 AM Ticket #17454 (Tool instance no longer in window list) closed by
- can't reproduce: No idea why the user is opening the same UniProt multiple times.
- 10:19 AM Ticket #17453 (Crash in garbage collection) closed by
- duplicate
- 6:54 AM Ticket #17456 (Crash on Mac waking from sleep) created by
- […]
- 5:12 AM Ticket #17455 (Crash on Mac waking from sleep) created by
- […]
- 4:28 AM Ticket #17454 (Tool instance no longer in window list) created by
- […]
Apr 21, 2025:
- 9:45 PM Ticket #17453 (Crash in garbage collection) created by
- […]
- 5:16 PM Ticket #17452 (File history thumbnail: Framebuffer image capture creation failed) closed by
- can't reproduce: Looks like failed X windows remote display on Linux.
- 5:12 PM Ticket #17451 (Crash destroying OpenGL context at exit) closed by
- duplicate
- 4:58 PM Ticket #17449 (Crash in Qt event loop after vop gaussian) closed by
- can't reproduce: User had open a somewhat large map 1366,1366,260. The same user …
- 4:55 PM Ticket #17448 (OpenGL context/textures problem) closed by
- can't reproduce
- 4:36 PM Ticket #17441 (Movie encode: "which ffmpeg" does not work on Windows) closed by
- fixed
- 4:35 PM Ticket #14644 (Faster DICOM map registration) closed by
- fixed: I think this ticket was probably addressed as part of the performance …
- 4:32 PM Ticket #17198 (Tech preview: ffmpeg: Permission denied) closed by
- fixed: For some reason ffmpeg was not executable. I added some code to make …
- 4:24 PM Dev2025-4-21 edited by
- (diff)
- 3:23 PM Ticket #17452 (File history thumbnail: Framebuffer image capture creation failed) created by
- […]
- 3:06 PM Dev2025-4-21 created by
- 3:05 PM DeveloperMeetings edited by
- (diff)
- 2:56 PM Ticket #17450 (Graphics hardware encountered an error and was reset:) closed by
- duplicate
- 2:53 PM Ticket #17451 (Crash destroying OpenGL context at exit) created by
- […]
- 2:52 PM Ticket #17447 (Regular PDB file opened in MD Viewer) closed by
- duplicate
- 2:35 PM Ticket #17446 (Crash on Mac waking from sleep) closed by
- duplicate
- 2:30 PM Ticket #17444 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate
- 2:24 PM Ticket #17443 (Crash on Mac waking from sleep) closed by
- duplicate
- 2:23 PM Ticket #17442 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Hi Ulrich, Thanks for reporting this problem. The issue is with the …
- 2:19 PM Ticket #17450 (Graphics hardware encountered an error and was reset:) created by
- […]
- 1:55 PM Ticket #17433 (Windows build fails due to symbolic link docs/devel/apps) closed by
- fixed: Should be fixed as of …
- 1:49 PM Ticket #17438 (Suppress tethers) closed by
- not a bug: Hi Roden, That is a "tether", showing that the CA is connected to / …
- 1:43 PM Ticket #17437 (Crash on Mac waking from sleep) closed by
- duplicate
- 1:40 PM Ticket #17436 (Graphics hardware encountered an error and was reset) closed by
- duplicate
- 1:22 PM Ticket #17425 (Alphafold contacts: pseudobond group or endpoint atom(s) is None) closed by
- invalid: ChimeraX 1.7 is being used to show AlphaFold 3 PAE values for contacts …
- 1:17 PM Ticket #17430 (Restore session: invalid MRC header value) closed by
- duplicate: The error message indicates your MRC file has invalid header data. …
- 1:12 PM Ticket #17429 (Log blank) closed by
- can't reproduce: I sometimes see ChimeraX on Windows show the Log as all black. I …
- 1:03 PM Ticket #17421 (DLL load failed while importing _ribbons) closed by
- can't reproduce: ChimeraX 1.8. Must be something specific about this user's Windows 10 …
- 12:59 PM Ticket #17418 (Crash destroying OpenGL context at exit) closed by
- duplicate: This is a known bug in Qt 6.8.2 that quiting ChimeraX from the Mac …
- 12:55 PM Ticket #17433 (Windows build fails due to symbolic link docs/devel/apps) reopened by
- The Windows build does not work on our development machine because of …
- 12:44 PM Ticket #17432 (Crash moving window between screens) closed by
- duplicate: The ChimeraX bug report dialog explained what we know about this crash …
- 12:42 PM Ticket #17431 (Graphics crash in glClear, macOS 12.7.4, NVIDIA GeForce GT 755M) closed by
- nonchimerax: Apple Nvidia graphics driver crash.
- 11:59 AM Ticket #17449 (Crash in Qt event loop after vop gaussian) created by
- […]
- 11:45 AM Ticket #17435 (ISOLDE: crash after 'isolde sim start') closed by
- can't reproduce: Not much info to go on; old version of ISOLDE
- 11:41 AM Ticket #17434 (ChimeraX asking to reregister. Supposed to only require registering once.) closed by
- duplicate: Duplicate of #5239; adding milestone to that ticket instead.
- 11:30 AM Ticket #17428 (Windows fatal exception: access violation) closed by
- duplicate: Duplicate of #17390
- 11:29 AM Ticket #17427 (Windows fatal exception: access violation) closed by
- duplicate
- 11:28 AM Ticket #17426 (Windows fatal exception: access violation) closed by
- duplicate
- 11:12 AM Ticket #17424 (Crash running modal dialog) closed by
- can't reproduce
- 11:09 AM Ticket #17423 (Crash in event loop) closed by
- can't reproduce: Possible remote display issue
- 11:04 AM Ticket #17448 (OpenGL context/textures problem) created by
- […]
- 11:04 AM Ticket #17447 (Regular PDB file opened in MD Viewer) created by
- […]
- 10:31 AM Ticket #17420 (Crash showing main window) closed by
- can't reproduce: At least, a crash showing the main window is what the Python traceback …
- 10:19 AM Ticket #17419 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:16 AM Ticket #17416 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Duplicate of #17304
- 10:15 AM Ticket #17415 (Crash in python_instances_of_class) closed by
- duplicate
- 10:14 AM Ticket #17414 (Crash in python_instances_of_class) closed by
- duplicate
- 8:16 AM Ticket #17446 (Crash on Mac waking from sleep) created by
- […]
- 6:33 AM Ticket #17445 (SEQCROW: mol_builder: 'NoneType' object has no attribute 'group') created by
- […]
- 5:52 AM Ticket #17444 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 5:34 AM Ticket #17443 (Crash on Mac waking from sleep) created by
- […]
- 5:25 AM Ticket #17442 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 3:57 AM Ticket #17441 (Movie encode: "which ffmpeg" does not work on Windows) created by
- […]
- 12:38 AM Ticket #17440 (Boltz install stalls in nogui mode) closed by
- fixed: Fixed. Made nogui mode boltz install and predict wait for subprocess …
Apr 20, 2025:
- 11:46 PM Ticket #17440 (Boltz install stalls in nogui mode) created by
- When I execute "boltz install ~/boltz" on linux it return and logs no …
- 11:03 PM GroupMeetings2024 edited by
- 07/18 Piet presentation slides. (diff)
- 10:59 PM 2025-2-13 edited by
- (diff)
- 10:21 PM Ticket #17433 (Windows build fails due to symbolic link docs/devel/apps) closed by
- limitation
- 3:17 PM Ticket #17439 (Crash in chem_group on Windows) created by
- […]
- 12:29 PM Ticket #17438 (Suppress tethers) created by
- […] ChimeraX Rendering artifact.png
- 8:13 AM Ticket #17437 (Crash on Mac waking from sleep) created by
- […]
Apr 19, 2025:
- 10:10 AM Ticket #17436 (Graphics hardware encountered an error and was reset) created by
- […]
- 12:25 AM Ticket #17435 (ISOLDE: crash after 'isolde sim start') created by
- […]
Apr 18, 2025:
- 3:28 PM Ticket #17434 (ChimeraX asking to reregister. Supposed to only require registering once.) created by
- […]
- 3:27 PM Ticket #17433 (Windows build fails due to symbolic link docs/devel/apps) created by
- Building ChimeraX on Windows 11 (vizvault.cgl.ucsf.edu) fails …
- 2:16 PM Ticket #17432 (Crash moving window between screens) created by
- […]
- 12:44 PM DeveloperMeetings edited by
- (diff)
- 11:52 AM Ticket #17431 (Graphics crash in glClear, macOS 12.7.4, NVIDIA GeForce GT 755M) created by
- […]
- 10:21 AM Ticket #17430 (Restore session: invalid MRC header value) created by
- […]
- 9:53 AM Ticket #17429 (Log blank) created by
- […] bug report - blank log.JPG
- 4:21 AM Ticket #17428 (Windows fatal exception: access violation) created by
- […]
- 4:18 AM Ticket #17427 (Windows fatal exception: access violation) created by
- […]
- 4:18 AM Ticket #17426 (Windows fatal exception: access violation) created by
- […]
- 3:48 AM Ticket #17425 (Alphafold contacts: pseudobond group or endpoint atom(s) is None) created by
- […]
- 3:34 AM Ticket #17424 (Crash running modal dialog) created by
- […]
- 3:21 AM Ticket #17423 (Crash in event loop) created by
- […]
- 1:31 AM Ticket #17422 (Error setting cavity color) created by
- […]
Apr 17, 2025:
- 11:52 PM Ticket #17421 (DLL load failed while importing _ribbons) created by
- […]
- 11:41 PM Ticket #4176 (mmCIF save/restore produces duplicate residues) closed by
- can't reproduce: The only way a residue could show up twice in the mmCIF output is if …
- 11:38 PM Ticket #4682 (Bug writing mmCIF for glycosylated protein) closed by
- fixed: After opening test.cif, all chains have polymer_type == 1
- 11:30 PM Ticket #9106 (Crash opening mmCIF) closed by
- worksforme: no response
- 11:29 PM Ticket #9402 (Crash opening mmCIF file) closed by
- can't reproduce
- 11:28 PM Ticket #9403 (Crash opening mmCIF file) closed by
- can't reproduce
- 11:27 PM Ticket #9620 (Crash writing mmCIF) closed by
- fixed
- 11:27 PM Ticket #9621 (Crash opening mmCIF file) closed by
- duplicate
- 11:26 PM Ticket #9622 (Crash opening mmCIF file) closed by
- worksforme: We fixed a major mmCIF reader memory leak in 1.7. If you experience a …
- 11:25 PM Ticket #16416 (Crash opening mmCIF) closed by
- can't reproduce
- 11:24 PM Ticket #9624 (Crash opening mmCIF file) closed by
- worksforme: We fixed a major mmCIF reader memory leak in 1.7. If you experience a …
- 11:21 PM Ticket #3637 (Problems writing mmCIF of partial structure) closed by
- limitation
- 11:18 PM Ticket #15461 (Deleted bond reappears in saved mmCIF file) closed by
- wontfix: For this to work, after the bond is deleted and before the mmCIF file …
- 10:52 PM Ticket #10038 (MemoryError opening mmCIF) closed by
- worksforme: no response
- 10:52 PM Ticket #10045 (MemoryError opening mmCIF) closed by
- worksforme: no response.
- 10:51 PM Ticket #10135 (Crash saving mmCIF) closed by
- can't reproduce
- 10:49 PM Ticket #17420 (Crash showing main window) created by
- […]
- 10:48 PM Ticket #10215 (Crash in garbage collection while fetching mmCIF) closed by
- can't reproduce: If you ever reproduce this error, please submit another bug report.
- 10:24 PM Ticket #16417 (Crash opening mmCIF) closed by
- can't reproduce: Haven't found a way to reproduce this yet.
- 10:22 PM Ticket #17129 (UncodeDecodeError using charmap codec to read mmCIF) closed by
- fixed: Unable to reproduce, but fixed likely cause of not specifying encoding …
- 10:18 PM Ticket #17419 (Crash on Mac waking from sleep) created by
- […]
- 5:03 PM Ticket #16484 (setting dark mode on command line is incomplete) closed by
- fixed: Works now on Mac and Windows. On Linux, Qt is not detecting if the …
- 2:25 PM Ticket #17418 (Crash destroying OpenGL context at exit) created by
- […]
- 2:04 PM Ticket #17388 (AL2CO failure on Windows) closed by
- worksforme
- 1:34 PM Ticket #17417 (Debug mode not working on Windows) created by
- On Windows, ChimeraX does not start up or show any windows when using …
- 1:25 PM Ticket #17416 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 11:34 AM Ticket #17415 (Crash in python_instances_of_class) created by
- […]
- 11:22 AM Ticket #17414 (Crash in python_instances_of_class) created by
- […]
- 10:53 AM Ticket #17413 (Graphics hardware encountered an error and was reset) closed by
- duplicate
- 10:49 AM Ticket #17413 (Graphics hardware encountered an error and was reset) created by
- […]
- 10:44 AM Ticket #17412 (Graphics hardware encountered an error and was reset) closed by
- duplicate
- 10:43 AM Ticket #17411 (Graphics hardware encountered an error and was reset) closed by
- duplicate
- 10:40 AM Ticket #17410 (Crash in garbage collection) closed by
- duplicate
- 10:38 AM Ticket #17409 (Graphics hardware encountered an error and was reset) closed by
- duplicate
- 10:37 AM Ticket #17408 (Crash moving window between screens) closed by
- duplicate
- 10:33 AM Ticket #17412 (Graphics hardware encountered an error and was reset) created by
- […]
- 10:23 AM Ticket #17411 (Graphics hardware encountered an error and was reset) created by
- […]
- 10:23 AM Ticket #17407 (AllMetal3D: wrapped C/C++ object of type QLabel has been deleted) closed by
- duplicate: Duplicate of #17193
- 10:19 AM Ticket #17406 (Minimize) closed by
- not a bug: Hi Alonso, As you discovered, ChimeraX does not have a minimization …
- 10:12 AM Ticket #17405 (Crash during auto-completion) closed by
- can't reproduce
- 7:26 AM Ticket #17410 (Crash in garbage collection) created by
- […]
- 6:55 AM Ticket #17386 (Graphics crash, macOS 14.6.1, Intel Iris Plus Graphics) closed by
- nonchimerax: Apple Intel graphics driver crash.
- 6:52 AM Ticket #17402 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel explained what we know about this crash …
- 6:48 AM Ticket #17403 (FoldSeek: Permission denied writing temp file) closed by
- duplicate: This bug in Windows ChimeraX was fixed several months ago in the …
- 5:22 AM Ticket #17409 (Graphics hardware encountered an error and was reset) created by
- […]
- 1:24 AM Ticket #17408 (Crash moving window between screens) created by
- […]
Apr 16, 2025:
- 5:57 PM Ticket #17407 (AllMetal3D: wrapped C/C++ object of type QLabel has been deleted) created by
- […]
- 4:27 PM Ticket #16987 (Modeller failure) closed by
- fixed: Worked around the Modeller bug as best as possible. Fix: …
- 3:54 PM Ticket #17406 (Minimize) created by
- […]
- 3:19 PM Ticket #17405 (Crash during auto-completion) created by
- […]
- 1:11 PM Ticket #17404 (Open TIFF stack: '_TIFF' object has no attribute 'PHOTOMETRIC') created by
- […] nnInteractive - Label Layer - img.tiff
- 11:42 AM Ticket #17385 (ChimeraX is not opened) closed by
- fixed: Hi Taehee, That information was helpful. In your ChimeraX Startup …
- 11:06 AM Ticket #17389 (MatchMaker: bad pairing arg produces traceback) closed by
- fixed: Changed 'pairing' and 'alg' keywords to EnumOf annotations for better …
- 10:23 AM Ticket #17401 (Windows fatal exception: access violation) closed by
- duplicate
- 10:22 AM Ticket #17400 ('ArrayGridData' object has no attribute 'dicom_data') closed by
- duplicate
- 10:21 AM Ticket #17399 (Windows fatal exception: access violation) closed by
- duplicate
- 10:20 AM Ticket #17398 (Windows fatal exception: access violation) closed by
- duplicate
- 10:20 AM Ticket #17397 (Windows fatal exception: access violation) closed by
- duplicate
- 10:19 AM Ticket #17396 (Windows fatal exception: access violation) closed by
- duplicate
- 10:18 AM Ticket #17395 (Windows fatal exception: access violation) closed by
- duplicate
- 10:17 AM Ticket #17394 (Windows fatal exception: access violation) closed by
- duplicate
- 10:17 AM Ticket #17393 (Windows fatal exception: access violation) closed by
- duplicate
- 10:16 AM Ticket #17392 (Windows fatal exception: access violation) closed by
- duplicate
- 10:15 AM Ticket #17391 (Windows fatal exception: access violation) closed by
- duplicate
- 9:54 AM Ticket #17387 (Crash on Mac waking from sleep) closed by
- duplicate
- 6:23 AM Ticket #17403 (FoldSeek: Permission denied writing temp file) created by
- […]
- 4:03 AM Ticket #17402 (Crash on Mac waking from sleep) created by
- […]
- 2:13 AM Ticket #17401 (Windows fatal exception: access violation) created by
- […]
- 1:45 AM Ticket #17400 ('ArrayGridData' object has no attribute 'dicom_data') created by
- […]
- 1:40 AM Ticket #17399 (Windows fatal exception: access violation) created by
- […]
- 12:52 AM Ticket #17398 (Windows fatal exception: access violation) created by
- […]
- 12:04 AM Ticket #17397 (Windows fatal exception: access violation) created by
- […]
Apr 15, 2025:
- 11:38 PM Ticket #17396 (Windows fatal exception: access violation) created by
- […]
- 11:38 PM Ticket #17395 (Windows fatal exception: access violation) created by
- […]
- 10:58 PM Ticket #17394 (Windows fatal exception: access violation) created by
- […]
- 10:57 PM Ticket #17393 (Windows fatal exception: access violation) created by
- […]
- 10:56 PM Ticket #17392 (Windows fatal exception: access violation) created by
- […]
- 10:56 PM Ticket #17391 (Windows fatal exception: access violation) created by
- […]
- 10:25 PM Ticket #17390 (Windows fatal exception: access violation) created by
- […]
- 8:00 PM Ticket #17389 (MatchMaker: bad pairing arg produces traceback) created by
- […]
- 7:22 PM Ticket #17378 (Restore coloring on non-existent surface: bad error message) closed by
- fixed: Fixed. The error message when restoring surface coloring on a surface …
- 7:12 PM Ticket #17388 (AL2CO failure on Windows) created by
- […]
- 5:53 PM Ticket #17387 (Crash on Mac waking from sleep) created by
- […]
- 2:07 PM Ticket #17386 (Graphics crash, macOS 14.6.1, Intel Iris Plus Graphics) created by
- […]
- 12:36 PM Ticket #17385 (ChimeraX is not opened) created by
- […]
- 10:34 AM Ticket #17384 (Unable to display GLY in Chimera) closed by
- not a bug: Asked and answered on chimerax-users
- 10:02 AM Ticket #17383 (Out of bounds string index when showing a tool window) closed by
- can't reproduce
- 10:00 AM Ticket #17382 (Unknown problem) closed by
- can't reproduce
- 9:56 AM Ticket #17380 (Restore new session in old ChimeraX) closed by
- limitation
- 9:42 AM Ticket #17377 (Crash at exit) closed by
- can't reproduce
- 9:41 AM Ticket #17376 (Crash at exit) closed by
- can't reproduce
- 9:39 AM Ticket #17375 (Crash moving window between screens) closed by
- duplicate
- 9:16 AM Ticket #17384 (Unable to display GLY in Chimera) created by
- […]
- 8:51 AM Ticket #17383 (Out of bounds string index when showing a tool window) created by
- […]
- 5:21 AM Ticket #17382 (Unknown problem) created by
- […]
- 4:22 AM Ticket #17381 (SEQCROW: NMR Spectrum: list index out of range) created by
- […] Toluene.out
- 2:40 AM Ticket #17380 (Restore new session in old ChimeraX) created by
- […]
Apr 14, 2025:
- 11:55 PM Ticket #17379 (Crash in chem_group on Windows) created by
- […]
- 9:35 PM Ticket #17378 (Restore coloring on non-existent surface: bad error message) created by
- […]
- 7:14 PM Ticket #17365 (Crash saving OBJ) closed by
- can't reproduce: This ChimeraX crash was in the Qt window toolkit event loop. The last …
- 7:11 PM Ticket #17359 (volume onesmask: 'NoneType' object has no attribute 'size') closed by
- fixed: Fixed. Made the volume onesmask give a clear error message if no …
- 2:01 PM Ticket #17377 (Crash at exit) created by
- […]
- 1:34 PM Ticket #17376 (Crash at exit) created by
- […]
- 1:28 PM Ticket #17375 (Crash moving window between screens) created by
- […]
- 11:49 AM Ticket #17374 (Keystroke forwarding to dead tool) closed by
- duplicate
- 11:48 AM Ticket #17373 (Keystroke forwarding to dead tool) closed by
- duplicate
- 11:47 AM Ticket #17372 (Keystroke forwarding to dead tool) closed by
- can't reproduce: The code has changed significantly since the 1.1 release being used here.
- 11:32 AM Ticket #17370 (Crash on Mac waking from sleep) closed by
- duplicate
- 11:31 AM Ticket #17369 (Crash in garbage collection) closed by
- duplicate
- 11:18 AM Ticket #17368 (Crash on Mac waking from sleep) closed by
- duplicate
- 11:17 AM Ticket #17367 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by
- can't reproduce: Probable remote display issue
- 10:54 AM Ticket #17364 (Crash closing dock widget) closed by
- can't reproduce
- 10:52 AM Ticket #17363 (Restore session: empty log) closed by
- duplicate: Hi Kexin, Thanks for reporting this problem. It was fixed in October …
- 10:42 AM Ticket #17362 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:38 AM Ticket #17360 (MOLE JSON: atom radius must be positive) closed by
- duplicate: Duplicate of #9745
- 10:29 AM Ticket #17358 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:27 AM Ticket #17356 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Duplicate of #17304
- 9:55 AM Ticket #17374 (Keystroke forwarding to dead tool) created by
- […]
- 9:55 AM Ticket #17373 (Keystroke forwarding to dead tool) created by
- […]
- 9:55 AM Ticket #17372 (Keystroke forwarding to dead tool) created by
- […]
- 9:52 AM Ticket #17371 (Crash in ExtractMolecule::connect_residue_by_template) created by
- […] 0.cif
- 7:35 AM Ticket #17370 (Crash on Mac waking from sleep) created by
- […]
- 4:35 AM Ticket #17369 (Crash in garbage collection) created by
- […]
- 4:21 AM Ticket #17368 (Crash on Mac waking from sleep) created by
- […]
- 2:40 AM Ticket #17367 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by
- […]
- 12:29 AM Ticket #17366 (ChimeraX1.9 problem) created by
- […]
Apr 13, 2025:
- 10:07 AM Ticket #17365 (Crash saving OBJ) created by
- […]
- 3:01 AM Ticket #17364 (Crash closing dock widget) created by
- […]
Apr 12, 2025:
- 6:10 PM Ticket #17363 (Restore session: empty log) created by
- […]
- 12:45 PM Ticket #17362 (Crash on Mac waking from sleep) created by
- […]
Apr 11, 2025:
- 8:53 AM Ticket #17361 (Crash creating HTML profile using remote display and XDG_SESSION_TYPE tty) created by
- […]
- 8:24 AM Ticket #17360 (MOLE JSON: atom radius must be positive) created by
- […]
- 7:13 AM Ticket #17359 (volume onesmask: 'NoneType' object has no attribute 'size') created by
- […]
- 2:47 AM Ticket #17358 (Crash on Mac waking from sleep) created by
- […]
Apr 10, 2025:
- 8:51 PM Ticket #17348 (SAXParseException reading markers) closed by
- fixed: Fixed. Made writing a marker set file (.cmm) when no marker models …
- 8:34 PM Ticket #17355 (Crash in event loop closing a QDockWidget, probably an AlphaFold PAE plot) closed by
- can't reproduce
- 8:23 PM Ticket #17340 (Crash moving window between screens) closed by
- duplicate: This ChimeraX crash is caused by a bug in the Qt window toolkit used …
- 7:36 PM Training edited by
- (diff)
- 7:32 PM Training edited by
- Added Andrii Kyrylchuk VR demo. (diff)
- 7:28 PM Training edited by
- Added BAYS high school intern demo. (diff)
- 7:24 PM Training edited by
- (diff)
- 7:18 PM Training edited by
- Added Sandler cryoEM VR demo. (diff)
- 7:12 PM Training edited by
- (diff)
- 7:02 PM Training edited by
- (diff)
- 6:56 PM Training edited by
- Added biophysics student vr demo. (diff)
- 6:49 PM Training edited by
- (diff)
- 4:23 PM Ticket #9256 (saving NMR ensemble pdb with [NAME] only saves last structure) closed by
- fixed: Fix: …
- 3:08 PM Ticket #17357 (pip install failure ("invalid requirement")) created by
- Using the attached wheel, "toolshed install" works fine to install it …
- 2:57 PM Ticket #17356 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 2:15 PM Ticket #17354 (Crash on Mac waking from sleep) closed by
- duplicate
- 2:09 PM Ticket #17353 (Crash destroying OpenGL context at exit) closed by
- duplicate
- 2:06 PM Ticket #17352 (Crash destroying OpenGL context at exit) closed by
- duplicate
- 2:03 PM Ticket #17351 (Crash in graphics driver rendering widget) closed by
- can't reproduce
- 2:01 PM Ticket #17350 (Save residue info: Permission denied) closed by
- nonchimerax
- 1:58 PM Ticket #17349 (Crash on Mac waking from sleep) closed by
- duplicate
- 1:52 PM Ticket #17347 (Crash on Mac waking from sleep) closed by
- duplicate
- 1:46 PM Ticket #17345 (Crash saving PNG) closed by
- can't reproduce
- 1:26 PM Ticket #17343 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Duplicate of #17304
- 12:02 PM Ticket #17355 (Crash in event loop closing a QDockWidget, probably an AlphaFold PAE plot) created by
- […]
- 10:57 AM Ticket #17354 (Crash on Mac waking from sleep) created by
- […]
- 10:56 AM Ticket #17342 (Unknown crash) closed by
- can't reproduce
- 10:29 AM Ticket #17353 (Crash destroying OpenGL context at exit) created by
- […]
- 10:28 AM Ticket #17352 (Crash destroying OpenGL context at exit) created by
- […]
- 8:09 AM Ticket #17351 (Crash in graphics driver rendering widget) created by
- […]
- 7:13 AM Ticket #17350 (Save residue info: Permission denied) created by
- […]
- 6:59 AM Ticket #17349 (Crash on Mac waking from sleep) created by
- […]
- 5:36 AM Ticket #17348 (SAXParseException reading markers) created by
- […]
- 1:46 AM Ticket #17347 (Crash on Mac waking from sleep) created by
- […]
- 1:20 AM Ticket #17346 ("isolde add aa" on non-amino acid) created by
- […]
- 1:12 AM Ticket #17345 (Crash saving PNG) created by
- […]
Apr 9, 2025:
- 6:42 PM Ticket #17344 ('CCP4Grid' object has no attribute 'dicom_data') created by
- […]
- 4:03 PM Ticket #17343 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 2:37 PM phenix-4-10-25 edited by
- (diff)
- 1:49 PM phenix-4-10-25 edited by
- (diff)
- 12:44 PM Ticket #17342 (Unknown crash) created by
- […]
- 12:18 PM Ticket #17341 (Support PDB hex numbering) created by
- […]
- 11:47 AM Ticket #17340 (Crash moving window between screens) created by
- […]
- 10:03 AM Ticket #17339 (Scipy symbol not found) closed by
- duplicate: Duplicate of #17079
- 9:58 AM Ticket #17337 (Crash in chem_group on Windows) closed by
- duplicate: This was fixed the next day.
- 9:40 AM Ticket #17335 (Crash using context menu) closed by
- can't reproduce
- 9:38 AM Ticket #17334 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:37 AM Ticket #17333 (problem saving images/movies) closed by
- limitation: Hi Marcin, The "Snapshot" icon in the toolbar tries to save the image …
- 9:30 AM Ticket #17332 (Failure writing command history: No space left on device) closed by
- nonchimerax
- 4:54 AM Ticket #17339 (Scipy symbol not found) created by
- […]
- 2:32 AM Ticket #17338 (SEQCROW: read ORCA output: could not convert string to float: '( -0.0') created by
- […]
- 1:51 AM Ticket #17337 (Crash in chem_group on Windows) created by
- […]
- 1:36 AM Ticket #17336 (CliX: operand type(s) for |: 'type' and 'NoneType') created by
- […]
Apr 8, 2025:
- 6:32 PM Ticket #17329 (Graphics hardware encountered an error and was reset) closed by
- nonchimerax: ChimeraX crashed in the Apple Intel graphics driver. Unfortunately …
- 6:29 PM Ticket #17328 (Graphics crash, macOS 13.2.1, Intel Iris Plus Graphics) closed by
- nonchimerax: Apple Intel graphics driver crash.
- 6:27 PM Ticket #17321 (Mutation Scores: UnicodeDecodeError reading .csv file) closed by
- nonchimerax: User dragged and dropped a .csv file that was not a mutation scores …
- 5:51 PM Ticket #17335 (Crash using context menu) created by
- […]
- 5:13 PM Ticket #17334 (Crash on Mac waking from sleep) created by
- […]
- 4:48 PM Ticket #17333 (problem saving images/movies) created by
- […] [[Image(...)]]
- 3:02 PM Ticket #17332 (Failure writing command history: No space left on device) created by
- […]
- 2:27 PM phenix-4-10-25 edited by
- (diff)
- 2:08 PM phenix-4-10-25 edited by
- (diff)
- 1:52 PM phenix-4-10-25 created by
- 1:52 PM Features edited by
- (diff)
- 10:11 AM Ticket #17331 (Needleman-Wunsch error) closed by
- can't reproduce
- 10:09 AM Ticket #17330 (Crash on Mac waking from sleep) closed by
- duplicate
- 10:06 AM Ticket #17331 (Needleman-Wunsch error) created by
- […]
- 10:06 AM Ticket #17327 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Duplicate of #17304
- 9:59 AM Ticket #17326 (Crash accessing StructureSeq.structure) closed by
- duplicate
- 9:58 AM Ticket #17325 (Crash moving window between screens) closed by
- duplicate
- 9:55 AM Ticket #17324 (Crash moving window between screens) closed by
- duplicate
- 9:48 AM Ticket #17322 (read_trr_natoms failure; return code 2) closed by
- can't reproduce: The error indicates that a string internal to the file was the wrong …
- 9:40 AM Ticket #17330 (Crash on Mac waking from sleep) created by
- […]
- 9:27 AM Ticket #17329 (Graphics hardware encountered an error and was reset) created by
- […]
- 9:11 AM Ticket #17319 (Crash on Mac waking from sleep) closed by
- duplicate
- 9:11 AM Ticket #17319 (Crash on Mac waking from sleep) reopened by
- 9:11 AM Ticket #17319 (Crash on Mac waking from sleep) closed by
- can't reproduce
- 9:08 AM Ticket #17318 (=?UTF-8?B?UmU6ICBbQ2hpbWVyYVhdICMxNzMwMTogRmlsZSBoYXMgbm8gc3VmZml4?=) closed by
- not a bug: Great! Glad to hear it. --Eric
- 9:06 AM Ticket #17317 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) closed by
- duplicate: Duplicate of #17304
- 8:18 AM Ticket #17328 (Graphics crash, macOS 13.2.1, Intel Iris Plus Graphics) created by
- […]
- 8:13 AM Ticket #17327 (pyKVFinder: missing LC_LOAD_DYLIB (must link with at least libSystem.dylib)) created by
- […]
- 6:59 AM Ticket #17326 (Crash accessing StructureSeq.structure) created by
- […]
- 6:09 AM Ticket #17325 (Crash moving window between screens) created by
- […]
- 5:23 AM Ticket #17324 (Crash moving window between screens) created by
- […]
- 3:47 AM Ticket #17323 (ArtiaX: parser error reading STAR file) created by
- […]
- 3:15 AM Ticket #17322 (read_trr_natoms failure; return code 2) created by
- […]
- 2:20 AM Ticket #17321 (Mutation Scores: UnicodeDecodeError reading .csv file) created by
- […]
- 1:20 AM Ticket #17320 ('close' before web job finishes causes error) created by
- […]
Note:
See TracTimeline
for information about the timeline view.
