Timeline



Oct 22, 2025: Today

5:46 AM Ticket #19210 (ChimeraX bug report submission) created by chimerax-bug-report@…
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5:33 AM Ticket #19209 (ChimeraX bug report submission) created by chimerax-bug-report@…
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5:30 AM Ticket #19208 (ChimeraX bug report submission) created by chimerax-bug-report@…
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5:23 AM Ticket #19207 (ChimeraX bug report submission) created by chimerax-bug-report@…
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5:09 AM Ticket #19206 (ChimeraX bug report submission) created by chimerax-bug-report@…
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4:27 AM Ticket #19205 (ChimeraX bug report submission) created by andreu.mormaldonado@…
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1:27 AM Ticket #19204 (ChimeraX bug report submission) created by chimerax-bug-report@…
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Oct 21, 2025: Yesterday

8:05 PM Ticket #19203 (ChimeraX bug report submission) created by rohou.alexis@…
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3:32 PM Ticket #19200 (UnicodeDecodeError opening STL file) closed by Tom Goddard
can't reproduce: ChimeraX STL code decided the STL file was ascii instead of binary. I …
1:22 PM 2025-10-23 edited by Tom Goddard
(diff)
1:21 PM DeveloperMeetings edited by Tom Goddard
(diff)
11:27 AM Ticket #19202 (Crash using open/save dialog) closed by Eric Pettersen
can't reproduce
11:24 AM Ticket #19198 (ffmpeg: Permission denied) closed by Eric Pettersen
duplicate: Hi Terry! This problem is fixed in the 1.10.1 release, so if you get …
11:02 AM Ticket #19202 (Crash using open/save dialog) created by chimerax-bug-report@…
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10:36 AM Ticket #19201 (Somehow make UniProt info more "Claude accessible") created by Tom Goddard
I just tried to prod Claude into selecting the S4 voltage sensor helix …
10:30 AM Ticket #19200 (UnicodeDecodeError opening STL file) created by chimerax-bug-report@…
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10:24 AM Dev2025-10-27 edited by Tom Goddard
(diff)
10:21 AM Ticket #19199 (Have help command return help text) created by Tom Goddard
I just tried to prod Claude into selecting the S4 voltage sensor helix …
10:18 AM Ticket #19197 (Crash on Mac waking from sleep) closed by Tom Goddard
duplicate: The ChimeraX bug report panel said what we know about this crash: …
10:16 AM Dev2025-10-27 created by Tom Goddard
10:16 AM Ticket #19196 (Problem with Segger reading HDF5 with unusual path, and with ...) closed by Tom Goddard
can't reproduce: Not clear why it can't open this file. I think Windows would handle …
10:13 AM Ticket #19198 (ffmpeg: Permission denied) created by tplybrand@…
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10:10 AM 2025-10-16 edited by Tom Goddard
(diff)
10:09 AM 2025-10-23 created by Tom Goddard
10:09 AM 2025-10-16 edited by Tom Goddard
(diff)
9:57 AM DeveloperMeetings edited by Tom Goddard
(diff)
8:07 AM Ticket #19197 (Crash on Mac waking from sleep) created by nirakar.basnet@…
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1:02 AM Ticket #19196 (Problem with Segger reading HDF5 with unusual path, and with ...) created by chimerax-bug-report@…
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Oct 20, 2025:

8:11 PM Ticket #19195 (Crash deleting atoms when cavities shown) created by dyzhou@…
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4:14 PM Dev2025-10-20 edited by Tom Goddard
(diff)
3:07 PM Dev2025-10-20 edited by Tom Goddard
(diff)
2:07 PM Ticket #19190 (An error occurred in drawing the scene) closed by Tom Goddard
nonchimerax: OpenGL out of memory error 1285 creating small status line message …
2:05 PM Ticket #19188 (boltz predict: cannot execute Boltz) closed by Tom Goddard
not a bug: Seems that the user set the Boltz installation directory to some …
1:54 PM Ticket #19189 (Combine into existing ID) closed by Eric Pettersen
duplicate: Duplicate of #17785
1:48 PM Ticket #19187 (mshMIGPerform crash in NSAccessiblity native Mac APIs) closed by Eric Pettersen
duplicate
1:14 PM Ticket #19194 (Boltz prediction fails with sequence pasted into GUI) closed by Tom Goddard
fixed: Fixed. I made a change on October 6, 2025 to check if you specify the …
1:12 PM Ticket #19194 (Boltz prediction fails with sequence pasted into GUI) created by guenter.fritz.phenix.ccp4@…
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12:33 PM Ticket #19193 (Read DICOM: 'rsi' is None) created by chimerax-bug-report@…
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12:11 PM Ticket #19183 (Crash in swap_buffers) closed by Tom Goddard
duplicate: Crash in swap buffers when Side View calls …
12:03 PM Ticket #19192 (Boltz: TypeError: 'NoneType' object is not iterable when no sequences ...) closed by Tom Goddard
fixed: Fixed. Now gives clear error message of boltz prediction run with no …
11:54 AM Ticket #19182 (Crash in event loop) closed by Eric Pettersen
can't reproduce: Hi Arul, Thanks for reporting this problem. I did not get a crash …
11:47 AM Ticket #19192 (Boltz: TypeError: 'NoneType' object is not iterable when no sequences ...) created by goddard@…
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11:34 AM Ticket #19181 (KVFinder on old MacOS) closed by Eric Pettersen
limitation
11:32 AM Ticket #19180 (Crash in event loop) closed by Eric Pettersen
can't reproduce: This one involved running a modal dialog event loop, but many similar …
11:29 AM Ticket #19178 (Crash in swap_buffers) closed by Tom Goddard
duplicate: Another crash when side view is calling Qt …
11:21 AM Ticket #19179 (Session restore: truncated session file) closed by Eric Pettersen
nonchimerax: Could conceivably raise some kind of more informative UserError in …
11:15 AM Ticket #19176 (Session save: lz4 chunk compression out of memory) closed by Eric Pettersen
duplicate
11:08 AM Ticket #19174 (Crash using open/save dialog) closed by Eric Pettersen
can't reproduce
11:06 AM Ticket #19173 (Crash using open/save dialog) closed by Eric Pettersen
can't reproduce
10:56 AM Ticket #18869 (OpenMM compiler failure on Windows) closed by Eric Pettersen
duplicate
10:55 AM Ticket #19191 (Crash during/after session save) created by halle.andrews-clark@…
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8:26 AM Ticket #19190 (An error occurred in drawing the scene) created by chimerax-bug-report@…
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Oct 19, 2025:

11:33 PM Ticket #19189 (Combine into existing ID) created by chimerax-bug-report@…
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9:24 PM Ticket #19188 (boltz predict: cannot execute Boltz) created by chimerax-bug-report@…
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3:59 PM Ticket #19187 (mshMIGPerform crash in NSAccessiblity native Mac APIs) created by chimerax-bug-report@…
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1:45 PM Ticket #19186 (Late registration of URL scheme generates error/warning) created by weberm@…
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5:54 AM Ticket #19185 (glClear after waking from sleep: invalid framebuffer operation) created by caillancm@…
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2:29 AM Ticket #19184 (Find Cavities problem with insertion codes) created by chimerax-bug-report@…
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Oct 18, 2025:

3:59 PM Ticket #19183 (Crash in swap_buffers) created by chimerax-bug-report@…
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1:42 PM Ticket #19182 (Crash in event loop) created by arulviarajesh@…
[…] Structure2D_COMPOUND_CID_5280805.sdf
9:49 AM Ticket #19181 (KVFinder on old MacOS) created by chimerax-bug-report@…
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Oct 17, 2025:

10:46 PM Ticket #19180 (Crash in event loop) created by chimerax-bug-report@…
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7:40 PM Ticket #19179 (Session restore: truncated session file) created by chimerax-bug-report@…
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2:42 PM Ticket #19178 (Crash in swap_buffers) created by chimerax-bug-report@…
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12:04 PM Ticket #19177 (isolde set gpuDeviceIndex: Specified DeviceIndex but not ...) created by s.sommerhage@…
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10:41 AM Ticket #19176 (Session save: lz4 chunk compression out of memory) created by chimerax-bug-report@…
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10:41 AM Ticket #19175 (Session save: lz4 chunk compression out of memory) created by chimerax-bug-report@…
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2:39 AM Ticket #19174 (Crash using open/save dialog) created by chimerax-bug-report@…
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1:36 AM Ticket #19173 (Crash using open/save dialog) created by chimerax-bug-report@…
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Oct 16, 2025:

7:10 PM Ticket #19172 (Minimization CPU fallback: This Integrator is already bound to a context) created by cwa5555@…
[…] 10mer_2.pdb
4:52 PM Ticket #19169 (Read EMAN HDF5: file signature not found) closed by Tom Goddard
nonchimerax: Unfortunately the user is trying to open a ChimeraX session file that …
4:26 PM Ticket #19171 (SEQCROW: mol_builder: 'NoneType' object has no attribute 'group') closed by Eric Pettersen
duplicate: Duplicate of #17445
1:59 PM windows-signing edited by Greg Couch
(diff)
12:00 PM Ticket #19171 (SEQCROW: mol_builder: 'NoneType' object has no attribute 'group') created by chimerax-bug-report@…
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8:00 AM Ticket #19170 (Unwanted clipping plane) created by samuel.haysom@…
[…] clipping_bug_report.zip
3:02 AM Ticket #19169 (Read EMAN HDF5: file signature not found) created by chimerax-bug-report@…
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1:23 AM Ticket #19168 (ANNOTEX error (path separator on Windows)) created by yinjiayue22@…
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Oct 15, 2025:

5:34 PM Ticket #19164 (Crash using open/save dialog, along with many OpenGL errors) closed by Eric Pettersen
can't reproduce
5:15 PM Ticket #19167 (just saving and restoring session gives Animation message in Log when ...) created by Elaine Meng
In today's daily build UCSF ChimeraX version: 1.11.dev202510150607 …
4:38 PM Ticket #19166 (Make scenes restore surface per-vertex coloring and triangle masking) created by Tom Goddard
Currently per-vertex coloring and triangle masking (surface zones) are …
2:53 PM Ticket #19165 (Improving usability of deep mutational scan visualization tools) created by Tom Goddard
Willow and I discussed for an hour today a dozen aspects of how to …
2:44 PM Ticket #19164 (Crash using open/save dialog, along with many OpenGL errors) created by chimerax-bug-report@…
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2:42 PM ChangeLog edited by Elaine Meng
(diff)
2:08 PM Ticket #19133 (KVFinder crash with large grid spacing / step size) closed by Eric Pettersen
fixed: Fixed by limiting grid spacing value to >0 and <5
1:54 PM Ticket #19163 (Arrows save in sessions, but not if in scenes) created by Elaine Meng
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1:22 PM Ticket #19149 (Scene restore is restoring calling each model.restore_scene() many times) closed by Eric Pettersen
fixed: That was indeed the issue. I have now exdented that loop.
1:16 PM Ticket #19162 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:16 PM Ticket #19161 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:15 PM Ticket #19162 (ChimeraX bug report submission) created by Eric Pettersen
[…]
1:14 PM Ticket #19161 (ChimeraX bug report submission) created by Eric Pettersen
[…]
1:13 PM Ticket #19160 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:13 PM Ticket #19160 (ChimeraX bug report submission) created by chimerax-bug-report@…
[…]
1:12 PM Ticket #19159 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:11 PM Ticket #19159 (ChimeraX bug report submission) created by Eric Pettersen
[…]
1:11 PM Ticket #19158 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:10 PM Ticket #19158 (ChimeraX bug report submission) created by chimerax-bug-report@…
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1:09 PM Ticket #19157 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:08 PM Ticket #19157 (ChimeraX bug report submission) created by Eric Pettersen
[…]
1:03 PM Ticket #19156 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:03 PM Ticket #19155 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:02 PM Ticket #19154 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
1:01 PM Ticket #19153 (ChimeraX bug report submission) closed by Eric Pettersen
not a bug
11:56 AM phenix-10-15-25 edited by Eric Pettersen
(diff)
11:56 AM phenix-10-15-25 edited by Eric Pettersen
(diff)
11:54 AM phenix-10-15-25 edited by Eric Pettersen
(diff)
11:54 AM phenix-10-15-25 edited by Eric Pettersen
(diff)
10:27 AM Ticket #19156 (ChimeraX bug report submission) created by Eric Pettersen
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10:25 AM Ticket #19155 (ChimeraX bug report submission) created by chimerax-bug-report@…
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10:21 AM phenix-10-15-25 edited by Eric Pettersen
(diff)
10:19 AM Ticket #19154 (ChimeraX bug report submission) created by chimerax-bug-report@…
[…]
10:16 AM phenix-10-15-25 created by Eric Pettersen
10:14 AM Features edited by Eric Pettersen
(diff)
9:42 AM Ticket #19153 (ChimeraX bug report submission) created by Eric Pettersen
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12:08 AM Ticket #19143 (Make bug report CGI script drop anonymous reports from old ChimeraX ...) closed by Greg Couch
fixed: Makes sense to me too. I changed the bug report dialog to catch HTTP …
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