![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Timeline
May 5, 2023:
- 7:38 AM Ticket #8954 (Matchmaker: 'NoneType' object has no attribute 'setChecked') created by
- […]
- 7:34 AM Ticket #8953 (Matchmaker: 'NoneType' object has no attribute 'setChecked') created by
- […]
- 1:11 AM Ticket #8952 (Graphics crash, macOS 10.15.7, Intel UHD Graphics 630) created by
- […]
May 4, 2023:
- 11:49 PM Ticket #8951 (QPainter::begin: Paint device returned engine == 0) created by
- […]
- 7:08 PM Ticket #8950 (Volume Viewer histogram: cannot convert float NaN to integer) created by
- […]
- 4:17 PM Ticket #8947 (ChimeraX bug report submission) closed by
- fixed: As I say in #8498, I added code to clean up the QThread the tool …
- 4:16 PM Ticket #8948 (ChimeraX bug report submission) closed by
- fixed
- 2:28 PM Ticket #8945 (Unsupported scale factor (0.000000) detected on Display0) closed by
- can't reproduce: *Probably* the same as #8226. The user does have two displays.
- 2:26 PM Ticket #8949 (sequence.residues out of range) created by
- […]
- 2:13 PM Ticket #8944 (Crash using color panel) closed by
- can't reproduce
- 2:07 PM Ticket #8942 (Crash using color panel) closed by
- can't reproduce
- 12:16 PM Ticket #8948 (ChimeraX bug report submission) created by
- […]
- 11:50 AM Ticket #8947 (ChimeraX bug report submission) created by
- […]
- 11:49 AM Ticket #8946 (KeyError: 'patients') created by
- […]
- 10:45 AM Ticket #8945 (Unsupported scale factor (0.000000) detected on Display0) created by
- […]
- 7:13 AM Ticket #8944 (Crash using color panel) created by
- […]
- 6:15 AM Ticket #8943 (ISOLDE: _populate_platform_combo_box: tuple.index(x): x not in tuple) created by
- […]
May 3, 2023:
- 9:50 PM Ticket #8942 (Crash using color panel) created by
- […]
- 3:37 PM Ticket #8941 (ISOLDE: _populate_platform_combo_box: tuple.index(x): x not in tuple) created by
- […]
- 11:15 AM Ticket #8939 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: 1.3
- 10:58 AM Ticket #8938 (FindHBond: accPhiPsi arguments) closed by
- not a bug
- 10:34 AM Ticket #8936 (mmCIF reading causing "not enough memory" error) closed by
- duplicate
- 9:38 AM Ticket #8934 (mmCIF reading causing "not enough memory" error) closed by
- duplicate
- 5:33 AM Ticket #8940 (System information API) created by
- […]
- 5:32 AM Ticket #8939 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 5:26 AM Ticket #8938 (FindHBond: accPhiPsi arguments) created by
- […]
May 2, 2023:
- 9:16 PM Ticket #8937 (Session restore: index out of range) created by
- […]
- 4:30 PM ChangeLog edited by
- (diff)
- 4:14 PM ChangeLog edited by
- (diff)
- 2:18 PM Ticket #8936 (mmCIF reading causing "not enough memory" error) created by
- […]
- 2:17 PM Ticket #8935 (mmCIF reading causing "not enough memory" error) created by
- […]
- 2:09 PM Ticket #8934 (mmCIF reading causing "not enough memory" error) created by
- […]
- 12:07 PM Ticket #8932 ('<' not supported between instances of 'IS' and 'NoneType') closed by
- fixed
- 11:48 AM Ticket #8915 (AddH: roomiest: list index out of range) closed by
- fixed: Fix: …
- 11:31 AM Ticket #8917 (Issue with Chimera installation) closed by
- limitation: As documented on …
- 9:18 AM Ticket #8933 (silhouettes → tiny boxes) closed by
- nonchimerax
- 8:53 AM Ticket #8929 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce
- 7:47 AM Ticket #8933 (silhouettes → tiny boxes) created by
- […] Screenshot 2023-05-02 at 15.37.07.png
- 7:30 AM Ticket #8932 ('<' not supported between instances of 'IS' and 'NoneType') created by
- […] chimerax-error.png
- 5:50 AM Ticket #8931 (Crash showing Rapid Access at startup) created by
- […]
- 5:12 AM Ticket #8930 (Crash computing polymers) created by
- […]
- 3:03 AM Ticket #8929 (Crash using File→Open on Windows and/or in return statement) created by
- […]
May 1, 2023:
- 5:26 PM Ticket #8928 (MemoryError saving maps in sessions) created by
- […]
- 11:12 AM Ticket #8926 (Crash from rosetta/code signature in 1.4) closed by
- nonchimerax: This Stack Overflow post indicates it's probably not a ChimeraX …
- 10:57 AM Ticket #8924 ('textureSampler' : syntax error) closed by
- duplicate
- 10:43 AM Ticket #8922 (Crash using File→Open dialog on Windows and/or returning from function) closed by
- can't reproduce: 1.3
- 10:18 AM Ticket #8909 (data['species'] is None) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/3b45ad73a6298fc79cfe28edc8cf59 …
- 10:16 AM Ticket #8927 ('pip install mdtraj' from ChimeraX command line gives error) created by
- User indicated over email that their bundle is likely to be Linux …
- 3:48 AM Ticket #8926 (Crash from rosetta/code signature in 1.4) created by
- […]
- 12:06 AM Ticket #8925 (Graphics crash, macOS 10.15.7, Intel Iris Plus Graphics) created by
- […]
Apr 30, 2023:
Apr 29, 2023:
Apr 28, 2023:
- 3:22 PM Ticket #8920 (Save X3D: numpy array used as boolean) closed by
- fixed: Fixed in the daily build and the 1.6 release candidate as of tomorrow. …
- 11:41 AM Ticket #8922 (Crash using File→Open dialog on Windows and/or returning from function) created by
- […]
- 11:04 AM Ticket #8921 (UnicodeDecodeError opening SDF) closed by
- can't reproduce: Probably fixed by same fix as for #8746
- 10:53 AM Ticket #8919 (Crash showing Rapid Access at startup) closed by
- can't reproduce
- 10:51 AM Ticket #8918 (silhouettes → tiny boxes) closed by
- nonchimerax: The incorrect silhouette edge display in ChimeraX is caused by …
- 10:37 AM Ticket #8916 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by
- can't reproduce
- 9:58 AM Ticket #8921 (UnicodeDecodeError opening SDF) created by
- […]
- 9:19 AM Ticket #8914 (Crash in garbage collection) closed by
- duplicate: The delayed call of _cleanup has been eliminated for just this reason.
- 8:58 AM Ticket #8912 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: 1.3
- 8:47 AM Ticket #8920 (Save X3D: numpy array used as boolean) created by
- […]
- 7:09 AM Ticket #8919 (Crash showing Rapid Access at startup) created by
- […]
- 6:26 AM Ticket #8918 (silhouettes → tiny boxes) created by
- […] test.tiff
- 5:22 AM Ticket #8905 (Crash in find_clashing_atoms) closed by
- fixed: Yeah, those should all be fixed. They hit a couple of the old …
- 4:45 AM Ticket #8917 (Issue with Chimera installation) created by
- […] Error.JPG
- 4:29 AM Ticket #8916 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by
- […]
- 3:42 AM Ticket #8915 (AddH: roomiest: list index out of range) created by
- […]
- 2:50 AM Ticket #8914 (Crash in garbage collection) created by
- […]
- 1:53 AM Ticket #8913 (Crash showing Rapid Access at startup) created by
- […]
Apr 27, 2023:
- 10:09 PM Ticket #8912 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 2:58 PM Ticket #8910 (data['species'] is None) closed by
- duplicate
- 2:56 PM Ticket #8908 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Linux
- 2:55 PM Ticket #8906 (Crash fetching available bundles) closed by
- can't reproduce: 1.2.5
- 2:50 PM Ticket #8904 (Crash in QDialog::exec() closed by
- can't reproduce
- 2:46 PM Ticket #8903 (Crash in ~QGridLayout) closed by
- can't reproduce: XMAS is installed, so seems extremely likely that it's the known XMAS …
- 2:16 PM Ticket #8911 (ChimeraX ColabFold bug) created by
- […] [[Image(...)]]
- 12:42 PM Ticket #8910 (data['species'] is None) created by
- […]
- 12:32 PM Ticket #8909 (data['species'] is None) created by
- […]
- 10:34 AM Ticket #8908 (Crash showing Rapid Access at startup) created by
- […]
- 12:20 AM Ticket #8906 (Crash fetching available bundles) created by
- […]
Apr 26, 2023:
- 6:20 PM phenix-4-27-23 edited by
- (diff)
- 6:19 PM Ticket #7813 (Complain when multiple default openers exist for a suffix) closed by
- fixed: Didn't add an interface for undoing user designation of a default …
- 5:18 PM Ticket #8905 (Crash in find_clashing_atoms) created by
- […]
- 3:52 PM Ticket #8904 (Crash in QDialog::exec() created by
- […]
- 12:38 PM Ticket #8903 (Crash in ~QGridLayout) created by
- […]
- 12:07 PM Ticket #8902 (Truncated HIS residue) created by
- […] ATMcryo monomer.pdb
- 11:48 AM phenix-4-27-23 edited by
- (diff)
- 11:44 AM phenix-4-27-23 edited by
- (diff)
- 11:37 AM phenix-4-27-23 edited by
- (diff)
- 11:30 AM phenix-4-27-23 edited by
- (diff)
- 11:29 AM phenix-4-27-23 created by
- 11:24 AM Features edited by
- (diff)
- 9:16 AM Ticket #8901 (Crash in removeDockWidget) closed by
- duplicate
- 9:07 AM Ticket #8899 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: 1.3
- 9:05 AM Ticket #8898 (Crash creating ribbons) closed by
- can't reproduce: 1.2.5, as well as possibly being a driver problem
- 7:07 AM Ticket #8901 (Crash in removeDockWidget) created by
- […]
- 1:48 AM Ticket #8900 (glDrawBuffer: invalid operation setting contour level) created by
- […]
- 1:14 AM Ticket #8899 (Crash using File→Open on Windows and/or in return statement) created by
- […]
Apr 25, 2023:
- 7:39 PM Ticket #8898 (Crash creating ribbons) created by
- […]
- 1:55 PM Ticket #8893 (antechamber: Bad CPU type in executable) closed by
- fixed: Exception now caught in both branches
- 11:13 AM Ticket #8896 (No space left on device) closed by
- nonchimerax: Hi Nitesh, Your disk drive ran out of space, so ChimeraX couldn't …
- 11:10 AM Ticket #8895 (Second "camera stereo": buffer is None) closed by
- duplicate
- 9:38 AM Ticket #8892 (Crash saving session) closed by
- can't reproduce
- 9:34 AM Ticket #8891 (Crash in garbage collection) closed by
- duplicate: _cleanup (and its associated problems) has been removed
- 9:20 AM Ticket #8890 (Crash after saving movie) closed by
- can't reproduce
- 8:14 AM Ticket #8885 (add_restraint: __init__() takes 3 positional arguments but 4 were given) closed by
- fixed: This was fixed in the ISOLDE 1.5 release (to get it just install the …
- 4:15 AM Ticket #8897 (mmCIF reading causing "not enough memory" error) created by
- […]
- 12:32 AM Ticket #8896 (No space left on device) created by
- […]
Apr 24, 2023:
- 2:45 PM Ticket #8895 (Second "camera stereo": buffer is None) created by
- […]
- 2:29 PM Ticket #8894 (Second "camera stereo": buffer is None) created by
- […]
- 2:02 PM Ticket #8893 (antechamber: Bad CPU type in executable) created by
- […]
- 1:32 PM Ticket #8892 (Crash saving session) created by
- […]
- 12:53 PM Ticket #8891 (Crash in garbage collection) created by
- […]
- 12:26 PM Ticket #8890 (Crash after saving movie) created by
- […]
- 12:03 PM Ticket #8889 (Restore new session in old ChimeraX) closed by
- limitation
- 12:02 PM Ticket #8888 (mmCIF reading causing "not enough memory" error) closed by
- duplicate: Duplicate of #8815
- 11:59 AM Ticket #8887 (AddH: More than 2 coplanar positions specified) closed by
- can't reproduce: Was asking for the trigonal planar bonding position to an atom that …
- 11:48 AM Ticket #8886 (Modeller: invalid license key) closed by
- duplicate: This error has been made more "user friendly" in later releases.
- 2:01 AM Ticket #8889 (Restore new session in old ChimeraX) created by
- […]
- 1:45 AM Ticket #8888 (mmCIF reading causing "not enough memory" error) created by
- […]
Apr 23, 2023:
- 7:41 PM Ticket #8887 (AddH: More than 2 coplanar positions specified) created by
- […]
- 7:02 AM Ticket #8886 (Modeller: invalid license key) created by
- […]
Apr 21, 2023:
- 11:15 PM Ticket #8885 (add_restraint: __init__() takes 3 positional arguments but 4 were given) created by
- […]
- 1:06 PM Ticket #8862 (AddH facing protons wrong) closed by
- not a bug: One was not reproducible and the other was facing toward a closer …
- 11:22 AM Ticket #8882 (Crash while rendering sequence alignment) closed by
- nonchimerax
- 11:19 AM Ticket #8884 (Crash in garbage collection) closed by
- duplicate: Duplicate of #8673
- 10:56 AM Ticket #8884 (Crash in garbage collection) created by
- […]
- 9:30 AM Ticket #8883 (Add Charges: Unknown class for change tracking: FakeAtom) closed by
- duplicate: Hi Hegar, Thanks for reporting this problem. It has been fixed in …
- 8:35 AM Ticket #8876 (Keyboard interrupt while rendering movie) closed by
- can't reproduce
- 6:19 AM Ticket #8883 (Add Charges: Unknown class for change tracking: FakeAtom) created by
- […]
Apr 20, 2023:
- 8:03 PM Ticket #8882 (Crash while rendering sequence alignment) created by
- […]
- 5:10 PM Ticket #8103 (Shell tool: Qt enum vs. int) closed by
- fixed: Works for me in the current daily build, and the result is quite cool!
- 3:49 PM Ticket #8869 (RFE: include Metal acceleration in 1.6) closed by
- fixed: Okay, I dropped the libs into plugins. I hope those links I mentioned …
- 1:38 PM Ticket #8881 (glClear: invalid framebuffer operation) closed by
- can't reproduce
- 1:37 PM Ticket #8880 (ResidueStepper referencing dead structure) closed by
- duplicate
- 1:34 PM Ticket #8879 (Unknown crash) closed by
- can't reproduce
- 1:31 PM Ticket #8878 (Crash in fork during "devel install") closed by
- can't reproduce
- 10:48 AM Ticket #8873 (Crash opening custom Python script) closed by
- can't reproduce: Hi Thu, I would suggest upgrading to the 1.6 release candidate. …
- 8:42 AM Ticket #8881 (glClear: invalid framebuffer operation) created by
- […]
- 8:25 AM Ticket #8880 (ResidueStepper referencing dead structure) created by
- […]
- 7:20 AM Ticket #8879 (Unknown crash) created by
- […]
- 6:56 AM Ticket #8878 (Crash in fork during "devel install") created by
- […]
- 4:08 AM Ticket #8877 (ResidueStepper referencing dead structure) created by
- […]
Apr 19, 2023:
- 9:31 PM Ticket #8876 (Keyboard interrupt while rendering movie) created by
- […]
- 8:15 PM Ticket #8875 (XMAS: crash in ~QGridLayout()) created by
- […]
- 1:27 PM Ticket #8832 (Hiding models slow) closed by
- fixed: Deleting models was slow because Collection pointer arrays were being …
- 1:17 PM Ticket #8874 (Invalid code signature) created by
- […]
- 12:04 PM Ticket #8873 (Crash opening custom Python script) created by
- […]
- 9:20 AM Ticket #8871 (Crash in removeDockWidget) closed by
- duplicate: Predates the "two widgets in same layout" fix
- 9:09 AM Ticket #8870 (Crash in fork during "devel install") closed by
- nonchimerax
- 8:32 AM Ticket #8868 (Crash showing Rapid Access at startup) closed by
- can't reproduce
- 7:10 AM Ticket #8872 (glClear: invalid framebuffer operation) created by
- […]
- 6:27 AM Ticket #8871 (Crash in removeDockWidget) created by
- […]
- 4:38 AM Ticket #8870 (Crash in fork during "devel install") created by
- […]
- 3:19 AM Ticket #8869 (RFE: include Metal acceleration in 1.6) created by
- […] openmm_metal.zip
Apr 18, 2023:
- 1:36 PM Ticket #8868 (Crash showing Rapid Access at startup) created by
- […]
- 9:53 AM Ticket #8867 (Crash in removeDockWidget) closed by
- duplicate
- 9:45 AM Ticket #8865 (Crash accessing StructureSeq.structure property) closed by
- duplicate
- 9:44 AM Ticket #8864 (QSpiApplication::keyEventError "org.freedesktop.DBus.Error.NoReply") closed by
- can't reproduce: Hi Jiang Xinyi, Thanks for reporting this problem. This is some kind …
- 9:36 AM Ticket #8863 (Crash in removeDockWidget) closed by
- duplicate: This is the last build that doesn't have the half-docked-widget fix.
- 8:59 AM Ticket #8867 (Crash in removeDockWidget) created by
- […]
- 7:11 AM Ticket #8866 (Dead PositionRestraintMgr (and other problems)) created by
- […]
- 6:29 AM Ticket #8865 (Crash accessing StructureSeq.structure property) created by
- […]
- 3:18 AM Ticket #8864 (QSpiApplication::keyEventError "org.freedesktop.DBus.Error.NoReply") created by
- […]
Apr 17, 2023:
- 5:20 PM Ticket #8863 (Crash in removeDockWidget) created by
- […]
- 1:49 PM Ticket #8861 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by
- duplicate
- 1:37 PM Ticket #8856 (Crash in event loop) closed by
- can't reproduce
- 1:36 PM Ticket #8855 (Crash in event loop) closed by
- can't reproduce
- 1:34 PM Ticket #8854 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Linux
- 1:22 PM Ticket #8862 (AddH facing protons wrong) created by
- […] bug.cxs
- 12:59 PM Ticket #8852 (Crash showing Rapid Access at startup) closed by
- can't reproduce
- 11:51 AM Ticket #8857 (ChimeraX bug report submission) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/49fb1ca087afcc950389cc21069098 …
- 11:49 AM Ticket #8849 (Build Structure: wrapped C/C++ object of type QLabel has been deleted) closed by
- duplicate: Hi Jitendra, Thanks for reporting this problem. It has been fixed in …
- 11:39 AM Ticket #8846 (Crash using File→Open dialog on Windows and/or returning from function) closed by
- can't reproduce: 1.3
- 11:38 AM Ticket #8845 (Restore new session in old ChimeraX) closed by
- limitation
- 11:37 AM Ticket #8844 (Crash handling mouse down event) closed by
- can't reproduce
- 11:35 AM Ticket #8843 (UniProt fetch: list index out of range) closed by
- duplicate
- 11:31 AM Ticket #8861 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by
- […]
- 11:30 AM Ticket #8860 (Keyboard interrupt while saving .mrc file) created by
- […]
- 7:59 AM Ticket #8859 (View transition can be slow) created by
- […]
- 7:52 AM Ticket #8858 (Saving shift_and_scale uses numpy array as boolean) created by
- […]
- 7:35 AM Ticket #8857 (ChimeraX bug report submission) created by
- […]
- 4:24 AM Ticket #8856 (Crash in event loop) created by
- […]
- 4:08 AM Ticket #8855 (Crash in event loop) created by
- […]
- 4:06 AM Ticket #8854 (Crash showing Rapid Access at startup) created by
- […]
- 3:50 AM Ticket #8853 (Impossible model hierarchy in saved session) created by
- […]
- 3:47 AM Ticket #8852 (Crash showing Rapid Access at startup) created by
- […]
- 3:37 AM Ticket #8851 (MemoryError opening mmCIF) created by
- […]
- 2:50 AM Ticket #8850 (Problem creating pseudobond group during session restore) created by
- […]
- 1:59 AM Ticket #8849 (Build Structure: wrapped C/C++ object of type QLabel has been deleted) created by
- […]
Apr 15, 2023:
- 8:57 AM Ticket #8848 (Install StarMap from toolshed: ImportError: No module named pip) created by
- […]
- 7:12 AM Ticket #8847 (MemoryError opening mmCIF) created by
- […]
Apr 14, 2023:
- 11:19 PM Ticket #8846 (Crash using File→Open dialog on Windows and/or returning from function) created by
- […]
- 7:20 PM Ticket #8845 (Restore new session in old ChimeraX) created by
- […]
- 5:40 PM Ticket #8844 (Crash handling mouse down event) created by
- […]
- 5:34 PM Ticket #8828 (Bad mmCIF → CRYST1 translation) closed by
- fixed
- 3:08 PM Ticket #8843 (UniProt fetch: list index out of range) created by
- […]
- 12:10 PM Ticket #8839 (Error while hovering mouse in VR) closed by
- fixed: Fixed in ChimeraX 1.6 release candidate and daily build (available …
- 11:35 AM Ticket #8837 (Scalebar causes continuous redraw during movie recording) closed by
- can't reproduce: I do not observe any unexpected movie frames with a 2D label shown. …
- 11:01 AM Ticket #8842 (Allow a text label with scalebar) created by
- Tristan asks if the scalebar command could have an option to display a …
- 10:54 AM Ticket #8836 (Movie creation: No space left on device) closed by
- nonchimerax: This ChimeraX error "OSError: [Errno 28] No space left on device" …
- 10:52 AM Ticket #8834 (AdaptiveDihedralRestraintMgr creation for closed structure) closed by
- fixed: It used to be that closing the working model with an active simulation …
- 10:51 AM Ticket #8841 (Qt fatal error: Failed to initialize graphics backend for OpenGL.) closed by
- can't reproduce
- 10:48 AM Ticket #8833 (Using dead structure in Isolde.selected_atoms) closed by
- fixed: This is fixed in the ISOLDE 1.6.dev builds (and possibly in 1.5 - I …
- 10:34 AM Ticket #8835 (AdaptiveDihedralRestraintMgr creation for closed structure) closed by
- duplicate
- 6:48 AM Ticket #8841 (Qt fatal error: Failed to initialize graphics backend for OpenGL.) created by
- […]
- 6:31 AM Ticket #8840 (Mac M1 VR error with meeting command when other users start VR) created by
- […]
- 6:20 AM Ticket #8839 (Error while hovering mouse in VR) created by
- […]
- 6:06 AM Ticket #8838 (Clipper requirement produces traceback) created by
- […]
- 5:40 AM Ticket #8837 (Scalebar causes continuous redraw during movie recording) created by
- […]
- 3:55 AM Ticket #8836 (Movie creation: No space left on device) created by
- […]
- 2:37 AM Ticket #8835 (AdaptiveDihedralRestraintMgr creation for closed structure) created by
- […]
- 2:27 AM Ticket #8834 (AdaptiveDihedralRestraintMgr creation for closed structure) created by
- […]
- 2:14 AM Ticket #8833 (Using dead structure in Isolde.selected_atoms) created by
- […]
Apr 13, 2023:
- 7:30 PM 2023-4-13 edited by
- (diff)
- 7:15 PM Ticket #8831 (AlphaFold coloring: trying to get metadata attribute from Volume) closed by
- fixed: Fixed in 1.6 release candidate and daily builds April 14 and later. …
- 5:45 PM Ticket #8830 (MemoryError opening mmCIF) closed by
- can't reproduce
- 4:26 PM Ticket #8829 ("measure center" and "measure inertia" not using transformed position ...) closed by
- fixed: Fixed in 1.6. The measure center and measure inertia commands were …
- 4:21 PM Ticket #8826 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Hi Hamish, Thanks for reporting this problem. I recommend you …
- 3:52 PM Ticket #8832 (Hiding models slow) created by
- […]
- 2:43 PM Ticket #8831 (AlphaFold coloring: trying to get metadata attribute from Volume) created by
- […]
- 1:42 PM AddTracUser edited by
- (diff)
- 11:42 AM Ticket #8830 (MemoryError opening mmCIF) created by
- […]
- 10:27 AM Ticket #8829 ("measure center" and "measure inertia" not using transformed position ...) created by
- The centroid marker and inertia ellipsoid show up in the original …
- 10:19 AM Ticket #8828 (Bad mmCIF → CRYST1 translation) created by
- […]
- 9:07 AM Ticket #8827 (Out of memory after opening small mmCIF 7phr on Mac. Also ssl ...) created by
- […]
Apr 12, 2023:
- 11:33 PM Ticket #8826 (Crash showing Rapid Access at startup) created by
- […]
- 3:57 PM Ticket #8824 (EMDB fetch timeout) closed by
- nonchimerax: ChimeraX 0.93, wow! Apparently the EMDB ftp site did not respond. …
- 3:39 PM Ticket #8823 (Crash deleting atomic symmetry model(?)) closed by
- can't reproduce: The Python traceback for the crash is during ChimeraX startup. The …
- 3:21 PM 2023-4-13 edited by
- (diff)
- 2:29 PM Ticket #8825 (Session restore fails when 2D label id changed to be a submodel of a ...) created by
- […]
- 9:00 AM Ticket #8822 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: Hi, We believe this problem is fixed in newer versions of ChimeraX, …
- 8:56 AM Ticket #8821 (Crash using File→Open on Windows and/or in return statement) closed by
- can't reproduce: 1.3
- 6:47 AM Ticket #8824 (EMDB fetch timeout) created by
- […]
- 4:47 AM Ticket #8823 (Crash deleting atomic symmetry model(?)) created by
- […]
Apr 11, 2023:
- 10:37 PM Ticket #8761 (Crash in readcif::CIFFile::parse) closed by
- fixed: Thank you for following up on this. One more possible fix. Option …
- 7:22 PM Ticket #8509 (Write GLTF files directly to Quest 2 headset) closed by
- fixed
- 6:35 PM Ticket #8822 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 4:13 PM Ticket #4748 (execute command when models opened) closed by
- not a bug: It seems that Tony's OpenCommands bundle obviates the need for this.
- 2:14 PM Ticket #4665 (RFE: matchmaker "reportMatrix" option) closed by
- fixed: Okay, there is now a directly analogous 'reportMatrix' option to the …
- 12:25 PM Ticket #7643 (Mac ARM64 build broken: pyproject.toml lz4 compile uses system python) closed by
- fixed: This ticket should be resolved by cleaning the CONFINCLUDEPY, …
- 11:57 AM Ticket #6599 (RFE: Blast protein option to "List only best-matching chain per PDB entry") closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/d87561c3ac60cb8e5cfdf4ae232b23 …
- 11:48 AM Ticket #8821 (Crash using File→Open on Windows and/or in return statement) created by
- […]
- 10:56 AM Ticket #8739 (StarMap: 'NoneType' object has no attribute 'set_value') closed by
- fixed: The command stmset is mainly used to restore the StarMap session …
- 10:06 AM 2023-4-13 created by
- 10:03 AM DeveloperMeetings edited by
- (diff)
- 9:41 AM Ticket #8820 (Crash in removeDockWidget) closed by
- duplicate: This was the last release candidate that did not have the …
- 9:37 AM Ticket #8819 (Unknown crash at startup) closed by
- can't reproduce: Linux
- 9:19 AM Ticket #8813 (Crash using color chooser) closed by
- can't reproduce
- 9:01 AM Ticket #8820 (Crash in removeDockWidget) created by
- […]
- 8:28 AM Ticket #8790 (ISOLDE: residue_graph: edges should be a n x 2 array of unsigned ints) closed by
- fixed: The problem was three BEF residues in the model, which each contain …
- 4:02 AM Ticket #8819 (Unknown crash at startup) created by
- […]
- 1:35 AM Ticket #8818 (Read mmCIF: not enough memory) created by
- […] problem in chimerax.PNG
Apr 10, 2023:
- 11:22 PM Ticket #8817 (Unknown crash) created by
- […]
- 5:36 PM Ticket #5601 (Log templates from mmCIF files for theoretical models) closed by
- fixed: Okay, Implemented local scores. Each score becomes a residue …
- 4:57 PM Ticket #8816 (Graphics driver mismatch) created by
- […]
- 4:43 PM Ticket #8788 (MemoryError opening mmCIF files) closed by
- can't reproduce: See #8815.
- 4:43 PM Ticket #8742 (MemoryError open mmCIF) closed by
- can't reproduce: See #8815.
- 4:02 PM Dev2022-4-10 edited by
- (diff)
- 3:24 PM Ticket #8815 (mmCIF reading causing "not enough memory" error) created by
- Summarize existing (anonymous) tickets that show an not enough memory …
- 3:22 PM Ticket #7303 (Black screen on Ubuntu 22.04) closed by
- can't reproduce
- 3:15 PM Ticket #8814 (ISOLDE: assigned geometry mismatch) created by
- […] Screenshot 2023-04-11 at 00.09.49.png
- 2:18 PM Ticket #8813 (Crash using color chooser) created by
- […]
- 11:30 AM Ticket #6255 (Make DICOM reader read time series from 2D images) closed by
- fixed: This series has been readable for months; while it broke for a little …
- 11:29 AM Ticket #8710 (Mammogram from VICTRE doesn't have correct slice ordering) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/c4d6957758513a572fc9d3c2a9e61e …
- 11:29 AM Ticket #8517 (Some TCIA dicoms open at an angle that makes them look invisible) closed by
- fixed: [https://github.com/RBVI/ChimeraX/commit/c4d6957758513a572fc9d3c2a9e61e …
- 11:28 AM Ticket #8627 (Graphics crash when DICOM has unexpected size relative to other images ...) closed by
- fixed: I …
- 11:27 AM Ticket #8809 (Slow performance) closed by
- nonchimerax: See https://www.rbvi.ucsf.edu/chimerax/issues.html#linux_graphics
- 11:22 AM Ticket #8808 (Crash forking ffmpeg) closed by
- nonchimerax: I think we have only seen these fork crashes on ARM Mac running Intel …
- 11:20 AM Ticket #8806 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by
- nonchimerax: OpenGL probably not functioning. Could be remote display.
- 11:18 AM ChangeLog edited by
- (diff)
- 11:18 AM Ticket #8804 (Error in glClearColor) closed by
- nonchimerax: Looks like a graphics driver problem, RTX 4060 with March 2023 driver …
- 11:04 AM Ticket #8805 (Read mmCIF: not enough memory) closed by
- worksforme: Can't reproduce this.
- 10:47 AM Ticket #8812 (Crash in garbage collection during new object allocation) closed by
- duplicate
- 10:43 AM Ticket #8811 (Restore new session in old ChimeraX) closed by
- limitation: Hi Jamaine, Though sessions saved in old versions of ChimeraX are …
- 10:38 AM Ticket #8810 (Crash showing Rapid Access at startup) closed by
- can't reproduce: Linux
- 10:14 AM Ticket #8803 (Unknown crash) closed by
- can't reproduce: Seems like a QWebEngine crash
- 10:07 AM Ticket #8812 (Crash in garbage collection during new object allocation) created by
- […]
- 8:51 AM Ticket #8811 (Restore new session in old ChimeraX) created by
- […]
- 2:25 AM Ticket #8810 (Crash showing Rapid Access at startup) created by
- […]
- 1:38 AM Ticket #8809 (Slow performance) created by
- […]
Apr 9, 2023:
- 7:35 PM Ticket #8808 (Crash forking ffmpeg) created by
- […]
- 12:43 PM Ticket #8807 (Crash in msgpack_deserialize during session restore) created by
- […]
- 12:21 PM Ticket #8806 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by
- […]
- 9:20 AM Ticket #8805 (Read mmCIF: not enough memory) created by
- […]
Apr 8, 2023:
Apr 7, 2023:
- 4:19 PM Ticket #6208 (Crash deleting structure) closed by
- fixed: This no longer reproduces in the current ChimeraX, so other changes …
- 3:49 PM Ticket #8324 (Crash in removeDockWidget from clicking on a half-docked panel) closed by
- fixed: Fixed in 1.6.
- 2:35 PM Ticket #6821 (Allow 'info' command to write directly to a file) closed by
- fixed: In tomorrow's daily build, all the 'info' commands (except 'info …
- 2:02 PM Dev2022-4-10 edited by
- (diff)
- 2:02 PM Dev2022-4-10 created by
- 2:00 PM DeveloperMeetings edited by
- (diff)
- 12:11 PM Ticket #8799 (Tomogram black in LookSee unless scaled large) closed by
- fixed: Fixed. I changed the LookSee scaling code so that it scales the mesh …
- 11:52 AM Ticket #8803 (Unknown crash) created by
- […]
- 11:03 AM Ticket #8794 (Qt fatal error: Failed to initialize graphics backend for OpenGL) closed by
- nonchimerax: Qt can't start on Linux.
- 11:02 AM Ticket #8796 (Floating-point exception in glBufferSubData) closed by
- nonchimerax: Apple's AMD graphics driver crashed. Unfortunately Apple deprecated …
- 10:28 AM Ticket #8508 (Crash in removeDockWidget) closed by
- duplicate: No reply from user. Probable duplicate of #8324
- 9:55 AM Ticket #8801 (Struct Measure: wrapped C/C++ object of type QLabel has been deleted) closed by
- duplicate: Hi Jitendra, Thanks for reporting this problem. It has been fixed so …
- 4:57 AM Ticket #8802 (Crash estimating association parameters) created by
- […]
Apr 6, 2023:
- 11:11 PM Ticket #8801 (Struct Measure: wrapped C/C++ object of type QLabel has been deleted) created by
- […]
- 7:45 PM Ticket #8797 (Scene bounds not update after rename command changes model hierarchy) closed by
- fixed: Fixed. Not in 1.6. The rename command changed the model hierarchy. …
- 6:53 PM Ticket #8800 (surface transform command scale option erases vertex colors) closed by
- fixed: Fixed in 1.6. Setting new surface geometry erased vertex coloring and …
- 6:41 PM Ticket #8795 (surface transform command: AttributeError: 'NoneType' object has no ...) closed by
- fixed: Fixed. Was scaling empty surface models that had vertices = None.
- 6:33 PM Ticket #8800 (surface transform command scale option erases vertex colors) created by
- […]
- 6:20 PM Ticket #8799 (Tomogram black in LookSee unless scaled large) created by
- Begin forwarded message: From: "Schmid, Michael F." Subject: …
- 6:16 PM Ticket #8798 (ChimeraX hangs at startup checking for updates) created by
- Begin forwarded message: From: Tom Ferrin Subject: very long startup …
- 5:55 PM Ticket #8797 (Scene bounds not update after rename command changes model hierarchy) created by
- […]
- 5:26 PM Ticket #8796 (Floating-point exception in glBufferSubData) created by
- […]
- 5:25 PM Ticket #8795 (surface transform command: AttributeError: 'NoneType' object has no ...) created by
- […]
- 4:58 PM 2023-4-6 edited by
- (diff)
- 4:53 PM 2023-4-6 edited by
- (diff)
- 4:53 PM 2023-4-6 edited by
- (diff)
- 3:51 PM Ticket #8794 (Qt fatal error: Failed to initialize graphics backend for OpenGL) created by
- […]
- 1:31 PM Ticket #8792 (Graphics crash, macOS 12.6.3, Intel Iris Graphics 6100) closed by
- nonchimerax: Apple Intel graphics driver crash.
- 1:29 PM Ticket #8791 (read_full_array: Device not configured) closed by
- not a bug: User opened MRC map and later when ChimeraX tried to read data …
- 9:55 AM Ticket #8793 (Restore new session in old ChimeraX) closed by
- limitation
- 7:40 AM Ticket #8793 (Restore new session in old ChimeraX) created by
- […]
Apr 5, 2023:
- 5:46 PM Ticket #8789 (Modeller: 'NoneType' object has no attribute 'name') closed by
- duplicate
- 5:20 PM Ticket #8786 (Crash in removeDockWidget) closed by
- can't reproduce: Probable duplicate of #8324
- 4:46 PM Ticket #5729 (sqm suggestions) closed by
- fixed: Charge computation falls back to no -ek flag if using the flag result …
- 1:40 PM Ticket #8792 (Graphics crash, macOS 12.6.3, Intel Iris Graphics 6100) created by
- […]
- 1:36 PM Ticket #8791 (read_full_array: Device not configured) created by
- […]
- 12:37 PM Ticket #8790 (ISOLDE: residue_graph: edges should be a n x 2 array of unsigned ints) created by
- […]
- 12:12 PM Ticket #8789 (Modeller: 'NoneType' object has no attribute 'name') created by
- […]
- 12:02 PM Ticket #8788 (MemoryError opening mmCIF files) created by
- […]
- 11:07 AM Ticket #8787 (Give users a way to access the Imaging Data Commons from ChimeraX) created by
- 9:52 AM Ticket #8785 (Restore new session in old ChimeraX) closed by
- limitation
Note:
See TracTimeline
for information about the timeline view.
