Crash saving session

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        Windows-10-10.0.22621
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010d

Current thread 0x00004b1c (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0xc0000374

Current thread 0x00004b1c (most recent call first):
  File "", line 647 in _compile_bytecode
  File "", line 978 in get_code
  File "", line 846 in exec_module
  File "", line 680 in _load_unlocked
  File "", line 986 in _find_and_load_unlocked
  File "", line 1007 in _find_and_load
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\interfaces\cmd.py", line 133 in 
  File "", line 228 in _call_with_frames_removed
  File "", line 850 in exec_module
  File "", line 680 in _load_unlocked
  File "", line 986 in _find_and_load_unlocked
  File "", line 1007 in _find_and_load
  File "", line 228 in _call_with_frames_removed
  File "", line 1058 in _handle_fromlist
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\interfaces\__init__.py", line 28 in register_command
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1268 in register_command
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 314 in _register_cmd
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 304 in cb
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2105 in call
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2174 in lazy_register
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\commands\cli.py", line 3434 in find_aliases
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\commands\cli.py", line 3448 in list_aliases
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\session.py", line 394 in take_snapshot
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\session.py", line 283 in process
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\session.py", line 262 in discovery
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\session.py", line 619 in save
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\session.py", line 890 in save
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core_formats\__init__.py", line 84 in save
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\save_command\cmd.py", line 89 in provider_save
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2856 in run
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\save_command\cmd.py", line 75 in cmd_save
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2856 in run
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\core\commands\run.py", line 36 in run
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\save_command\dialog.py", line 51 in display
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\save_command\dialog.py", line 127 in show_save_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\save_command\dialog.py", line 116 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
===== Log before crash start =====
UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> toolshed show

Downloading bundle ChimeraX_XMAS-1.1.2-py3-none-any.whl  

Errors may have occurred when running pip:  

pip standard error:  
\---  
WARNING: Value for scheme.platlib does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX\1.3\site-packages  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\site-packages  
WARNING: Value for scheme.purelib does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX\1.3\site-packages  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\site-packages  
WARNING: Value for scheme.headers does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Include\tzdata  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\Include\tzdata  
WARNING: Value for scheme.scripts does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Scripts  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\Scripts  
WARNING: Value for scheme.data does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX  
sysconfig: C:\Users\james\AppData\Roaming\Python  
WARNING: Additional context:  
user = True  
home = None  
root = None  
prefix = None  
WARNING: Value for scheme.headers does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Include\pandas  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\Include\pandas  
WARNING: Value for scheme.headers does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Include\et-
xmlfile  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\Include\et-xmlfile  
WARNING: Value for scheme.headers does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Include\seaborn  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\Include\seaborn  
WARNING: Value for scheme.headers does not match. Please report this to
  
distutils:
C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Include\qtrangeslider  
sysconfig:
C:\Users\james\AppData\Roaming\Python\Python39\Include\qtrangeslider  
WARNING: Value for scheme.headers does not match. Please report this to
  
distutils:
C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Include\openpyxl  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\Include\openpyxl  
WARNING: Value for scheme.headers does not match. Please report this to
  
distutils:
C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Include\ChimeraX-XMAS  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\Include\ChimeraX-
XMAS  
WARNING: Value for scheme.headers does not match. Please report this to
  
distutils: C:\Users\james\AppData\Local\UCSF\ChimeraX\Python39\Include\UNKNOWN  
sysconfig: C:\Users\james\AppData\Roaming\Python\Python39\Include\UNKNOWN  
WARNING: You are using pip version 21.2.4; however, version 23.1.1 is
available.  
You should consider upgrading via the 'C:\Program Files\ChimeraX
1.3\bin\ChimeraX.exe -m pip install --upgrade pip' command.  
\---  

pip standard output:  
\---  
Looking in indexes: https://pypi.org/simple,
https://cxtoolshed.rbvi.ucsf.edu/pypi/  
Processing c:\users\james\downloads\chimerax_xmas-1.1.2-py3-none-any.whl  
Requirement already satisfied: ChimeraX-Core~=1.3 in c:\program files\chimerax
1.3\bin\lib\site-packages (from ChimeraX-XMAS==1.1.2) (1.3)  
Collecting seaborn  
Using cached seaborn-0.12.2-py3-none-any.whl (293 kB)  
Collecting qtrangeslider  
Using cached QtRangeSlider-0.1.5-py3-none-any.whl (33 kB)  
Collecting pandas  
Using cached pandas-2.0.1-cp39-cp39-win_amd64.whl (10.7 MB)  
Collecting openpyxl  
Using cached openpyxl-3.1.2-py2.py3-none-any.whl (249 kB)  
Requirement already satisfied: ChimeraX-UI~=1.3 in c:\program files\chimerax
1.3\bin\lib\site-packages (from ChimeraX-XMAS==1.1.2) (1.13.7)  
Requirement already satisfied: ChimeraX-MouseModes~=1.0 in c:\program
files\chimerax 1.3\bin\lib\site-packages (from ChimeraX-UI~=1.3->ChimeraX-
XMAS==1.1.2) (1.1)  
Requirement already satisfied: ChimeraX-Graphics~=1.0 in c:\program
files\chimerax 1.3\bin\lib\site-packages (from ChimeraX-UI~=1.3->ChimeraX-
XMAS==1.1.2) (1.1)  
Requirement already satisfied: ChimeraX-SelInspector~=1.0 in c:\program
files\chimerax 1.3\bin\lib\site-packages (from ChimeraX-UI~=1.3->ChimeraX-
XMAS==1.1.2) (1.0)  
Requirement already satisfied: ChimeraX-Arrays~=1.0 in c:\program
files\chimerax 1.3\bin\lib\site-packages (from ChimeraX-
Graphics~=1.0->ChimeraX-UI~=1.3->ChimeraX-XMAS==1.1.2) (1.0)  
Requirement already satisfied: ChimeraX-Geometry~=1.0 in c:\program
files\chimerax 1.3\bin\lib\site-packages (from ChimeraX-
Graphics~=1.0->ChimeraX-UI~=1.3->ChimeraX-XMAS==1.1.2) (1.1)  
Requirement already satisfied: ChimeraX-ItemsInspection~=1.0 in c:\program
files\chimerax 1.3\bin\lib\site-packages (from ChimeraX-
SelInspector~=1.0->ChimeraX-UI~=1.3->ChimeraX-XMAS==1.1.2) (1.0)  
Collecting et-xmlfile  
Using cached et_xmlfile-1.1.0-py3-none-any.whl (4.7 kB)  
Collecting tzdata>=2022.1  
Using cached tzdata-2023.3-py2.py3-none-any.whl (341 kB)  
Requirement already satisfied: numpy>=1.20.3 in c:\program files\chimerax
1.3\bin\lib\site-packages (from pandas->ChimeraX-XMAS==1.1.2) (1.21.2)  
Requirement already satisfied: python-dateutil>=2.8.2 in c:\program
files\chimerax 1.3\bin\lib\site-packages (from pandas->ChimeraX-XMAS==1.1.2)
(2.8.2)  
Requirement already satisfied: pytz>=2020.1 in c:\program files\chimerax
1.3\bin\lib\site-packages (from pandas->ChimeraX-XMAS==1.1.2) (2021.3)  
Requirement already satisfied: six>=1.5 in c:\program files\chimerax
1.3\bin\lib\site-packages (from python-dateutil>=2.8.2->pandas->ChimeraX-
XMAS==1.1.2) (1.16.0)  
Requirement already satisfied: matplotlib!=3.6.1,>=3.1 in c:\program
files\chimerax 1.3\bin\lib\site-packages (from seaborn->ChimeraX-XMAS==1.1.2)
(3.4.3)  
Requirement already satisfied: kiwisolver>=1.0.1 in c:\program files\chimerax
1.3\bin\lib\site-packages (from matplotlib!=3.6.1,>=3.1->seaborn->ChimeraX-
XMAS==1.1.2) (1.3.2)  
Requirement already satisfied: pillow>=6.2.0 in c:\program files\chimerax
1.3\bin\lib\site-packages (from matplotlib!=3.6.1,>=3.1->seaborn->ChimeraX-
XMAS==1.1.2) (8.3.2)  
Requirement already satisfied: cycler>=0.10 in c:\program files\chimerax
1.3\bin\lib\site-packages (from matplotlib!=3.6.1,>=3.1->seaborn->ChimeraX-
XMAS==1.1.2) (0.11.0)  
Requirement already satisfied: pyparsing>=2.2.1 in c:\program files\chimerax
1.3\bin\lib\site-packages (from matplotlib!=3.6.1,>=3.1->seaborn->ChimeraX-
XMAS==1.1.2) (3.0.6)  
Installing collected packages: tzdata, pandas, et-xmlfile, seaborn,
qtrangeslider, openpyxl, ChimeraX-XMAS  
Successfully installed ChimeraX-XMAS-1.1.2 et-xmlfile-1.1.0 openpyxl-3.1.2
pandas-2.0.1 qtrangeslider-0.1.5 seaborn-0.12.2 tzdata-2023.3  
\---  

Successfully installed ChimeraX-XMAS-1.1.2 et-xmlfile-1.1.0 openpyxl-3.1.2
pandas-2.0.1 qtrangeslider-0.1.5 seaborn-0.12.2 tzdata-2023.3  
Installed ChimeraX-XMAS (1.1.2)  

> ui tool show XMAS

> open "C:\Users\james\OneDrive\Leeds Postdoc Project Docs\Projects\BAM and
> SurA Complex Structure\Structures\COREP1_updated.pdb" format pdb

Chain information for COREP1_updated.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
C | No description available  
D | No description available  
E | No description available  
F | No description available  
  

> set bgColor white

> lighting soft

> lighting simple

> lighting soft

> hide cartoons

> hide atoms

> show cartoons

> volume style surface

No volumes specified  

> color #1/A rgb(0.252,0.680,1.000)

> color #1/B rgb(0.000,0.831,0.321)

> color #1/C rgb(1.000,0.861,0.137)

> color #1/D rgb(1.000,0.400,0.100)

> color #1/E rgb(0.780,0.000,0.400)

> color #1/f:25-163 rgb(0.48,0.41,0.93)

> color #1/f:395-427 rgb(0.93,0.51,0.93)

> color #1/f:172-273 rgb(0.28,0.24,0.54)

> color #1/f:274-394 rgb(0.59,0.05,0.59)

  
Peptide pair mapping of XlinkX evidence file: C:/Users/james/OneDrive/Leeds
Postdoc Project Docs/Projects/BAM and SurA and OMP Complex
Structure/Crosslinking/JEH150
BamA(S425C)BCDE__SurA(K27C)-OmpX(delL1-R170C)/Repeat2/JEH-150_XMAS.xlsx  
Unique peptide pairs: 90 out of 90  
Unique peptide pairs with pseudobonds: 30  
Pseudobonds are stored in C:/Users/james/OneDrive/Leeds Postdoc Project
Docs/Projects/BAM and SurA and OMP Complex Structure/Crosslinking/JEH150
BamA(S425C)BCDE__SurA(K27C)-OmpX(delL1-R170C)/Repeat2/JEH-150_XMAS_1.pb  
Mapping information is stored in C:/Users/james/OneDrive/Leeds Postdoc Project
Docs/Projects/BAM and SurA and OMP Complex Structure/Crosslinking/JEH150
BamA(S425C)BCDE__SurA(K27C)-OmpX(delL1-R170C)/Repeat2/JEH-150_XMAS_1.tsv  

> color #2 #ff5500 models transparency 0

> ~select #2

Nothing selected  
  
Peptide pair mapping of XlinkX evidence file: C:/Users/james/OneDrive/Leeds
Postdoc Project Docs/Projects/BAM and SurA and OMP Complex
Structure/Crosslinking/JEH97
BamA(R76C)BCDE__SurA(K27C)-OmpX/Repeat1/JEM-97_XMAS.xlsx  
Unique peptide pairs: 96 out of 96  
Unique peptide pairs with pseudobonds: 31  
Pseudobonds are stored in C:/Users/james/OneDrive/Leeds Postdoc Project
Docs/Projects/BAM and SurA and OMP Complex Structure/Crosslinking/JEH97
BamA(R76C)BCDE__SurA(K27C)-OmpX/Repeat1/JEM-97_XMAS_1.pb  
Mapping information is stored in C:/Users/james/OneDrive/Leeds Postdoc Project
Docs/Projects/BAM and SurA and OMP Complex Structure/Crosslinking/JEH97
BamA(R76C)BCDE__SurA(K27C)-OmpX/Repeat1/JEM-97_XMAS_1.tsv  
  
Peptide pair mapping of XlinkX evidence file: C:/Users/james/OneDrive/Leeds
Postdoc Project Docs/Projects/BAM and SurA and OMP Complex
Structure/Crosslinking/JEH151
BamA(S425C)BCDE__SurA(K27C)-EspP(S1299C)/Repeat1/JEH-151_XMAS.xlsx  
Unique peptide pairs: 54 out of 54  
Unique peptide pairs with pseudobonds: 20  
Pseudobonds are stored in C:/Users/james/OneDrive/Leeds Postdoc Project
Docs/Projects/BAM and SurA and OMP Complex Structure/Crosslinking/JEH151
BamA(S425C)BCDE__SurA(K27C)-EspP(S1299C)/Repeat1/JEH-151_XMAS_1.pb  
Mapping information is stored in C:/Users/james/OneDrive/Leeds Postdoc Project
Docs/Projects/BAM and SurA and OMP Complex Structure/Crosslinking/JEH151
BamA(S425C)BCDE__SurA(K27C)-EspP(S1299C)/Repeat1/JEH-151_XMAS_1.tsv  

> ~select #3

Nothing selected  

> ~select #4

Nothing selected  

> hide #2 models

> hide #3 models

> show #3 models

> show #2 models

> lighting soft

> lighting full

> lighting soft

> save "C:/Users/james/OneDrive/Leeds Postdoc Project Docs/Presentations &
> Posters/Group Meeting/(2023-04-26) Group Meeting/Crosslinking/all-XL.cxs"


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 3.3.14802 Core Profile Forward-Compatible Context 21.40.46 30.0.14046.0
OpenGL renderer: AMD Radeon(TM) Graphics
OpenGL vendor: ATI Technologies Inc.
Manufacturer: HP
Model: HP Pavilion Laptop 14-ec0xxx
OS: Microsoft Windows 11 Home (Build 22621)
Memory: 7,866,368,000
MaxProcessMemory: 137,438,953,344
CPU: 12 AMD Ryzen 5 5500U with Radeon Graphics         
OSLanguage: en-GB
Locale: ('en_GB', 'cp1252')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2021.10.8
    cftime: 1.5.1.1
    charset-normalizer: 2.0.9
    ChimeraX-AddCharge: 1.2.2
    ChimeraX-AddH: 2.1.11
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.2.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.31
    ChimeraX-AtomicLibrary: 4.2
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.0
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.6.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.2
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.2
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5
    ChimeraX-CommandLine: 1.1.5
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.3
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.5
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.2
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.4
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.4
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.4
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.2.6
    ChimeraX-ModelPanel: 1.2.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.7
    ChimeraX-PDB: 2.6.5
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.4.6
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.6.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.13.7
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0.1
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-XMAS: 1.1.2
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    comtypes: 1.1.10
    cxservices: 1.1
    cycler: 0.11.0
    Cython: 0.29.24
    decorator: 5.1.0
    docutils: 0.17.1
    et-xmlfile: 1.1.0
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 3.6.0
    html2text: 2020.1.16
    idna: 3.3
    ihm: 0.21
    imagecodecs: 2021.4.28
    imagesize: 1.3.0
    ipykernel: 5.5.5
    ipython: 7.23.1
    ipython-genutils: 0.2.0
    jedi: 0.18.0
    Jinja2: 3.0.1
    jupyter-client: 6.1.12
    jupyter-core: 4.9.1
    kiwisolver: 1.3.2
    lxml: 4.6.3
    lz4: 3.1.3
    MarkupSafe: 2.0.1
    matplotlib: 3.4.3
    matplotlib-inline: 0.1.3
    msgpack: 1.0.2
    netCDF4: 1.5.7
    networkx: 2.6.3
    numexpr: 2.8.0
    numpy: 1.21.2
    openpyxl: 3.1.2
    openvr: 1.16.801
    packaging: 21.3
    pandas: 2.0.1
    ParmEd: 3.2.0
    parso: 0.8.3
    pickleshare: 0.7.5
    Pillow: 8.3.2
    pip: 21.2.4
    pkginfo: 1.7.1
    prompt-toolkit: 3.0.23
    psutil: 5.8.0
    pycollada: 0.7.1
    pydicom: 2.1.2
    Pygments: 2.10.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.6
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.2
    pytz: 2021.3
    pywin32: 228
    pyzmq: 22.3.0
    qtconsole: 5.1.1
    QtPy: 1.11.3
    QtRangeSlider: 0.1.5
    RandomWords: 0.3.0
    requests: 2.26.0
    scipy: 1.7.1
    seaborn: 0.12.2
    setuptools: 57.5.0
    sfftk-rw: 0.7.1
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 4.2.0
    sphinx-autodoc-typehints: 1.12.0
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2021.4.8
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.1.1
    tzdata: 2023.3
    urllib3: 1.26.7
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.37.0
    wheel-filename: 1.3.0
    WMI: 1.5.1