Crash using color panel

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.6.dev202302010904 (2023-02-01 09:04:26 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
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{
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  "procLaunch" : "2023-05-04 15:47:23.7598 +0200",
  "procRole" : "Foreground",
  "version" : 2,
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  "captureTime" : "2023-05-04 15:57:56.9549 +0200",
  "incident" : "358BC086-00F1-43D3-AE54-0A51A47A8BA0",
  "bug_type" : "309",
  "pid" : 71046,
  "procExitAbsTime" : 621742877326080,
  "cpuType" : "X86-64",
  "procName" : "ChimeraX",
  "procPath" : "\/Applications\/ChimeraX_Daily.app\/Contents\/MacOS\/ChimeraX",
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  "isCorpse" : 1,
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    "path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore",
    "name" : "QtWebEngineCore"
  }
],
  "sharedCache" : {
  "base" : 140703312052224,
  "size" : 19331678208,
  "uuid" : "73669942-bd8a-3e40-951f-7fbe07b51cb8"
},
  "vmSummary" : "ReadOnly portion of Libraries: Total=1.5G resident=0K(0%) swapped_out_or_unallocated=1.5G(100%)\nWritable regions: Total=1.5G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.5G(100%)\n\n                                VIRTUAL   REGION \nREGION TYPE                        SIZE    COUNT (non-coalesced) \n===========                     =======  ======= \nAccelerate framework               768K        6 \nActivity Tracing                   256K        1 \nCG backing stores                 2164K        5 \nCG image                          2836K       65 \nColorSync                          236K       28 \nCoreAnimation                     14.4M      125 \nCoreGraphics                        12K        2 \nCoreImage                           60K        5 \nCoreUI image data                 5084K       38 \nFoundation                          40K        2 \nIOKit                             7940K        1 \nKernel Alloc Once                    8K        1 \nMALLOC                           783.6M      717 \nMALLOC guard page                   32K        8 \nMALLOC_LARGE (reserved)            384K        1         reserved VM address space (unallocated)\nMALLOC_NANO (reserved)           256.0M        1         reserved VM address space (unallocated)\nMach message                        16K        3 \nObjC additional data                15K        1 \nOpenGL GLSL                        384K        4 \nSTACK GUARD                        104K       26 \nStack                            163.7M       27 \nStack Guard                       56.0M        1 \nVM_ALLOCATE                      246.3M      112 \nVM_ALLOCATE (reserved)            32.0M        1         reserved VM address space (unallocated)\n__CTF                               756        1 \n__DATA                            45.0M      671 \n__DATA_CONST                      32.7M      347 \n__DATA_DIRTY                      1662K      219 \n__FONT_DATA                          4K        1 \n__GLSLBUILTINS                    5176K        1 \n__LINKEDIT                       675.4M      141 \n__TEXT                           824.4M      671 \n__UNICODE                          592K        1 \ndyld private memory               1056K        3 \nmapped file                      231.6M       59 \nshared memory                     2976K       27 \n===========                     =======  ======= \nTOTAL                              3.3G     3323 \nTOTAL, minus reserved VM space     3.0G     3323 \n",
  "legacyInfo" : {
  "threadTriggered" : {
    "name" : "CrBrowserMain",
    "queue" : "com.apple.main-thread"
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},
  "trialInfo" : {
  "rollouts" : [
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      "factorPackIds" : {

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  "experiments" : [
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}
}


Log:
UCSF ChimeraX version: 1.6.dev202302010904 (2023-02-01)  
© 2016-2023 Regents of the University of California. All rights reserved.  

> open /Users/michael/Library/CloudStorage/OneDrive-
> Personal/Documents/PhD/Structures/Proteins/1774_closed/chimeraX_docked.cxs

Log from Mon May 23 10:33:57 2022UCSF ChimeraX version: 1.4rc202205060510
(2022-05-06)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /Users/michael/Library/CloudStorage/OneDrive-
> Personal/Documents/PhD/Structures/Proteins/1774_closed/1774_closed_conf.pdb

Summary of feedback from opening /Users/michael/Library/CloudStorage/OneDrive-
Personal/Documents/PhD/Structures/Proteins/1774_closed/1774_closed_conf.pdb  
---  
warnings | Ignored bad PDB record found on line 9237  
score -10823.2  
  
Ignored bad PDB record found on line 9238  
silent_score -10823.2  
  
Ignored bad PDB record found on line 9239  
time 4253  
  
Ignored bad PDB record found on line 9240  
  
Chain information for 1774_closed_conf.pdb #1  
---  
Chain | Description  
A | No description available  
  

> open /Users/michael/Library/CloudStorage/OneDrive-
> Personal/Documents/PhD/Structures/Proteins/1774_closed/swissdockd_GWKCW__BAMY45PRCRKMC78AI2AE/1ligand.pdb

Summary of feedback from opening /Users/michael/Library/CloudStorage/OneDrive-
Personal/Documents/PhD/Structures/Proteins/1774_closed/swissdockd_GWKCW__BAMY45PRCRKMC78AI2AE/1ligand.pdb  
---  
warnings | Ignored bad PDB record found on line 1  
REMARK Energy: 36.4917  
  
Ignored bad PDB record found on line 2  
REMARK SimpleFitness: 36.4917  
  
Ignored bad PDB record found on line 3  
REMARK FullFitness: -2550.789  
  
Ignored bad PDB record found on line 4  
REMARK InterFull: -104.365  
  
Ignored bad PDB record found on line 5  
REMARK IntraFull: 247.171  
  
14 messages similar to the above omitted  
  

> open /Users/michael/Library/CloudStorage/OneDrive-
> Personal/Documents/PhD/Structures/Proteins/1774_closed/swissdockd_GWKCW__BAMY45PRCRKMC78AI2AE/2ligand.pdb

Summary of feedback from opening /Users/michael/Library/CloudStorage/OneDrive-
Personal/Documents/PhD/Structures/Proteins/1774_closed/swissdockd_GWKCW__BAMY45PRCRKMC78AI2AE/2ligand.pdb  
---  
warnings | Ignored bad PDB record found on line 1  
REMARK Energy: 35.7693  
  
Ignored bad PDB record found on line 2  
REMARK SimpleFitness: 35.7693  
  
Ignored bad PDB record found on line 3  
REMARK FullFitness: -2550.738  
  
Ignored bad PDB record found on line 4  
REMARK InterFull: -92.8689  
  
Ignored bad PDB record found on line 5  
REMARK IntraFull: 248.262  
  
14 messages similar to the above omitted  
  

> open /Users/michael/Library/CloudStorage/OneDrive-
> Personal/Documents/PhD/Structures/Proteins/1774_closed/swissdockd_GWKCW__BAMY45PRCRKMC78AI2AE/3ligand.pdb

Summary of feedback from opening /Users/michael/Library/CloudStorage/OneDrive-
Personal/Documents/PhD/Structures/Proteins/1774_closed/swissdockd_GWKCW__BAMY45PRCRKMC78AI2AE/3ligand.pdb  
---  
warnings | Ignored bad PDB record found on line 1  
REMARK Energy: 29.7272  
  
Ignored bad PDB record found on line 2  
REMARK SimpleFitness: 29.7272  
  
Ignored bad PDB record found on line 3  
REMARK FullFitness: -2549.7031  
  
Ignored bad PDB record found on line 4  
REMARK InterFull: -122.725  
  
Ignored bad PDB record found on line 5  
REMARK IntraFull: 254.779  
  
14 messages similar to the above omitted  
  

> open /Users/michael/Library/CloudStorage/OneDrive-
> Personal/Documents/PhD/Structures/Proteins/1774_closed/swissdockd_GWKCW__BAMY45PRCRKMC78AI2AE/4ligand.pdb

Summary of feedback from opening /Users/michael/Library/CloudStorage/OneDrive-
Personal/Documents/PhD/Structures/Proteins/1774_closed/swissdockd_GWKCW__BAMY45PRCRKMC78AI2AE/4ligand.pdb  
---  
warnings | Ignored bad PDB record found on line 1  
REMARK Energy: 21.2218  
  
Ignored bad PDB record found on line 2  
REMARK SimpleFitness: 21.2218  
  
Ignored bad PDB record found on line 3  
REMARK FullFitness: -2543.667  
  
Ignored bad PDB record found on line 4  
REMARK InterFull: -106.868  
  
Ignored bad PDB record found on line 5  
REMARK IntraFull: 245.779  
  
14 messages similar to the above omitted  
  

> select add #1

9235 atoms, 9356 bonds, 589 residues, 1 model selected  

> hide sel cartoons

> show sel surfaces

> transparency sel 90

Alignment identifier is 1/A  

> select #1/A:8

17 atoms, 16 bonds, 1 residue, 1 model selected  

> select #1/A:8

17 atoms, 16 bonds, 1 residue, 1 model selected  

> save
> /Users/michael/OneDrive/Documents/PhD/Structures/Proteins/1774_closed/chimeraX_docked.cxs

> show sel atoms

> hide sel surfaces

> color (#!1 & sel) orange

> select #1/A:14

19 atoms, 18 bonds, 1 residue, 1 model selected  

> select #1/A:14

19 atoms, 18 bonds, 1 residue, 1 model selected  

> hide sel surfaces

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:22

14 atoms, 14 bonds, 1 residue, 1 model selected  

> select #1/A:22

14 atoms, 14 bonds, 1 residue, 1 model selected  

> hide sel surfaces

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:37

7 atoms, 6 bonds, 1 residue, 1 model selected  

> select #1/A:37

7 atoms, 6 bonds, 1 residue, 1 model selected  

> hide sel surfaces

> show sel atoms

> color (#!1 & sel) orange

> style sel stick

Changed 7 atom styles  

> select #1/A:82

20 atoms, 20 bonds, 1 residue, 1 model selected  

> select #1/A:82

20 atoms, 20 bonds, 1 residue, 1 model selected  

> hide sel surfaces

[Repeated 1 time(s)]

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:84

19 atoms, 18 bonds, 1 residue, 1 model selected  

> select #1/A:84

19 atoms, 18 bonds, 1 residue, 1 model selected  

> hide sel surfaces

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:169

19 atoms, 18 bonds, 1 residue, 1 model selected  

> select #1/A:169

19 atoms, 18 bonds, 1 residue, 1 model selected  

> hide sel surfaces

> show sel atoms

> style sel stick

Changed 19 atom styles  

> color (#!1 & sel) yellow

> color (#!1 & sel) orange

> select #1/A:182

10 atoms, 9 bonds, 1 residue, 1 model selected  

> select #1/A:182

10 atoms, 9 bonds, 1 residue, 1 model selected  

> hide sel surfaces

[Repeated 1 time(s)]

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:278

17 atoms, 16 bonds, 1 residue, 1 model selected  

> select #1/A:278

17 atoms, 16 bonds, 1 residue, 1 model selected  

> style sel stick

Changed 17 atom styles  

> hide sel surfaces

> show sel atoms

> style sel stick

Changed 17 atom styles  

> color (#!1 & sel) orange

> select #1/A:300

14 atoms, 14 bonds, 1 residue, 1 model selected  

> select #1/A:300

14 atoms, 14 bonds, 1 residue, 1 model selected  

> hide sel surfaces

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:368

19 atoms, 18 bonds, 1 residue, 1 model selected  

> select #1/A:368

19 atoms, 18 bonds, 1 residue, 1 model selected  

> hide sel surfaces

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:383

7 atoms, 6 bonds, 1 residue, 1 model selected  

> select #1/A:383

7 atoms, 6 bonds, 1 residue, 1 model selected  

> hide sel surfaces

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:393

14 atoms, 13 bonds, 1 residue, 1 model selected  

> select #1/A:393

14 atoms, 13 bonds, 1 residue, 1 model selected  

> hide sel surfaces

[Repeated 1 time(s)]

> show sel atoms

> color (#!1 & sel) orange

> select #1/A:471

14 atoms, 13 bonds, 1 residue, 1 model selected  

> select #1/A:471

14 atoms, 13 bonds, 1 residue, 1 model selected  

> show sel atoms

> hide sel surfaces

> color (#!1 & sel) orange

> select #1/A:532

12 atoms, 11 bonds, 1 residue, 1 model selected  

> select #1/A:532

12 atoms, 11 bonds, 1 residue, 1 model selected  

> show sel atoms

> hide sel surfaces

> color (#!1 & sel) orange

> select #1/A:545

16 atoms, 15 bonds, 1 residue, 1 model selected  

> select #1/A:545

16 atoms, 15 bonds, 1 residue, 1 model selected  

> color (#!1 & sel) orange

> hide sel surfaces

[Repeated 1 time(s)]

> show sel atoms

> select #1/A:584

24 atoms, 25 bonds, 1 residue, 1 model selected  

> select #1/A:583-584

48 atoms, 51 bonds, 2 residues, 1 model selected  

> show sel atoms

> hide sel atoms

> show sel surfaces

> select add #1

9235 atoms, 9356 bonds, 589 residues, 2 models selected  

> select subtract #1

1 model selected  

> select add #1

9235 atoms, 9356 bonds, 589 residues, 1 model selected  

> color (#!1 & sel) white

> undo

> transparency sel 70

> transparency sel 95

> transparency sel 90

> color sel bychain

> undo

> select subtract #1

1 model selected  

> select add #2

123 atoms, 125 bonds, 1 residue, 1 model selected  

> hide sel atoms

> show sel surfaces

> select add #3

246 atoms, 250 bonds, 2 residues, 3 models selected  

> select subtract #2

123 atoms, 125 bonds, 1 residue, 2 models selected  

> color sel bychain

> hide sel atoms

> show sel surfaces

> select add #2

246 atoms, 250 bonds, 2 residues, 3 models selected  

> select subtract #3

123 atoms, 125 bonds, 1 residue, 3 models selected  

> select subtract #2

1 model selected  

> select add #4

123 atoms, 125 bonds, 1 residue, 1 model selected  

> hide sel atoms

> show sel surfaces

> select subtract #4

1 model selected  

> select add #5

123 atoms, 125 bonds, 1 residue, 1 model selected  

> hide sel atoms

> show sel surfaces

> select subtract #5

1 model selected  

> save /Users/Michael/Desktop/test2.png format png width 5000 supersample 9
> transparentBackground true

> lighting soft

> save /Users/Michael/Desktop/test2.png format png width 5000 supersample 9
> transparentBackground true

> save /Users/Michael/Desktop/test3.png format png width 5000 supersample 9
> transparentBackground true

> save
> /Users/michael/OneDrive/Documents/PhD/Structures/Proteins/1774_closed/chimeraX_docked.cxs

——— End of log from Mon May 23 10:33:57 2022 ———

opened ChimeraX session  




OpenGL version: 4.1 INTEL-18.8.5
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 645
OpenGL vendor: Intel Inc.

Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.1, Qt 6.4.2
Qt runtime version: 6.4.2
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: MacBookPro15,4
      Processor Name: Quad-Core Intel Core i5
      Processor Speed: 1.4 GHz
      Number of Processors: 1
      Total Number of Cores: 4
      L2 Cache (per Core): 256 KB
      L3 Cache: 6 MB
      Hyper-Threading Technology: Enabled
      Memory: 8 GB
      System Firmware Version: 1731.140.2.0.0 (iBridge: 19.16.16067.0.0,0)
      OS Loader Version: 540.120.3~22

Software:

    System Software Overview:

      System Version: macOS 12.6 (21G115)
      Kernel Version: Darwin 21.6.0
      Time since boot: 23 days 5:32

Graphics/Displays:

    Intel Iris Plus Graphics 645:

      Chipset Model: Intel Iris Plus Graphics 645
      Type: GPU
      Bus: Built-In
      VRAM (Dynamic, Max): 1536 MB
      Vendor: Intel
      Device ID: 0x3ea6
      Revision ID: 0x0001
      Metal Family: Supported, Metal GPUFamily macOS 2
      Displays:
        Color LCD:
          Display Type: Built-In Retina LCD
          Resolution: 2560 x 1600 Retina
          Framebuffer Depth: 24-Bit Color (ARGB8888)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal


Installed Packages:
    alabaster: 0.7.13
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.2.1
    Babel: 2.11.0
    backcall: 0.2.0
    blockdiag: 3.0.0
    build: 0.10.0
    certifi: 2021.10.8
    cftime: 1.6.2
    charset-normalizer: 3.0.1
    ChimeraX-AddCharge: 1.5.8
    ChimeraX-AddH: 2.2.3
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.3.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.8
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.3
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.43.7
    ChimeraX-AtomicLibrary: 10.0.3
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.1
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.7.2
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.1
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.0.2
    ChimeraX-CheckWaters: 1.3.1
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.3
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.6.dev202302010904
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.1
    ChimeraX-DistMonitor: 1.3.3
    ChimeraX-DockPrep: 1.1
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-Label: 1.1.7
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.2
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.0.11
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.11
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.8
    ChimeraX-ModelPanel: 1.3.6
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.10
    ChimeraX-PDB: 2.6.13
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.0
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 3.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.1
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.8.1
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.1
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.10.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Topography: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.26
    ChimeraX-uniprot: 2.2.2
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.1.6
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.1
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.1.2
    contourpy: 1.0.7
    cxservices: 1.2.2
    cycler: 0.11.0
    Cython: 0.29.33
    debugpy: 1.6.6
    decorator: 5.1.1
    docutils: 0.19
    entrypoints: 0.4
    executing: 1.2.0
    filelock: 3.9.0
    fonttools: 4.38.0
    funcparserlib: 1.0.1
    grako: 3.16.5
    h5py: 3.8.0
    html2text: 2020.1.16
    idna: 3.4
    ihm: 0.35
    imagecodecs: 2022.9.26
    imagesize: 1.4.1
    importlib-metadata: 6.0.0
    ipykernel: 6.19.2
    ipython: 8.7.0
    ipython-genutils: 0.2.0
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 7.4.8
    jupyter-core: 5.2.0
    kiwisolver: 1.4.4
    line-profiler: 4.0.2
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    openvr: 1.23.701
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