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Timeline
Apr 14, 2017:
- 1:07 PM Ticket #631 (Crossfade wrong on retina MacBook Pro 2012, 2x scaling problem) closed by
- fixed: Fixed.
Apr 13, 2017:
- 5:37 PM Ticket #619 (Bug reporting lite) closed by
- fixed
- 5:14 PM Ticket #633 (Status messages cause havoc by running event loop) created by
- To get status messages to appear we run the Qt event loop when the …
- 12:50 PM Ticket #632 (2d label improvements) created by
- 1) Most important feature to make 2d labels more usable is a mouse …
- 9:22 AM Ticket #631 (Crossfade wrong on retina MacBook Pro 2012, 2x scaling problem) created by
- When crossfading to hide one of two superposed models crossfade 100 …
Apr 11, 2017:
- 2:52 PM Ticket #627 (Atom deleted during atoms.radii lookup) closed by
- fixed: Fixed. Needed to clear destruction-batcher variables earlier to clear …
- 12:04 PM Ticket #629 (Drawing.display not saved/restored in session) closed by
- fixed: Fixed. Whether models are displayed was not being saved in sessions.
- 11:48 AM Ticket #630 (Add "position" command) created by
- The "view initial", "view matrix" and "view position" subcommands are …
Apr 10, 2017:
- 7:37 PM Ticket #629 (Drawing.display not saved/restored in session) created by
- As per summary. Open 1mtx; turn off 'shown' for first three models in …
- 2:47 PM Ticket #606 ("close" in this session quits ChimeraX) closed by
- fixed
- 2:32 PM Ticket #628 (Graphical selection not working; other usage problems) closed by
- not a bug: I guess you mean you want to display the rest of the atoms. You can …
Apr 8, 2017:
- 1:47 PM Ticket #552 (cartoon 4y7j crashes ChimeraX) closed by
- fixed: Fixed in 2b58710. The last fragment in chain D are …
Apr 7, 2017:
- 6:15 PM Ticket #628 (Graphical selection not working; other usage problems) created by
- […]
- 2:47 PM Ticket #627 (Atom deleted during atoms.radii lookup) created by
- Loading exosome.ihm (attached) loads several mmCIF files and generates …
- 5:50 AM Ticket #626 (If a volume is selected in the Models panel, Density Map Toolbar ...) created by
- At present, restricting the display buttons to act on one volume …
Apr 6, 2017:
- 1:39 PM 2017-04-06 edited by
- (diff)
- 1:39 PM Ticket #625 (Status messages during draw causes OpenGL error) created by
- Event processing during status message display appears to change the …
- 1:09 PM Ticket #593 (Save orthographic camera settings in session) closed by
- fixed: Done
- 12:08 PM 2017-04-06 created by
- 12:07 PM Ticket #471 (Commands executed twice) closed by
- fixed: Keyboard forwarding happened twice.
- 12:05 PM Ticket #613 (Add support for find hbonds) closed by
- duplicate
- 12:01 PM Ticket #549 (Mac middle mouse drag: QNSView mouseDragged: Internal mouse button ...) closed by
- fixed: Fixed by Qt update
- 11:58 AM Ticket #554 (Ribbon: RuntimeWarning: invalid value encountered in less d[d < ...) closed by
- fixed: Got rid of NaN in ribbon coordinates
- 11:51 AM Ticket #575 (Status line message causes OpenGL error) closed by
- fixed: Fixed by not sending status messages during redraw. Status message …
- 11:47 AM Ticket #577 (Bug in Python 3.6) closed by
- fixed
- 11:39 AM Ticket #587 (Chimera1/X matchmaker difference) closed by
- not a bug
- 11:21 AM Ticket #592 (Image save 2x smaller region on Mac OS 10.9.5) closed by
- wontfix: Mac OS X 10.9 is not supported
- 11:07 AM DeveloperMeetings edited by
- (diff)
- 8:22 AM 2017-03-30 edited by
- (diff)
- 8:15 AM 2017-03-30 edited by
- (diff)
- 8:14 AM Ticket #624 (Session format: test msgpack as an alternative to pickle) created by
- 8:12 AM Ticket #610 (Session format: test msgpack as an alternative to pickle) closed by
- invalid
- 7:26 AM 2017-03-30 edited by
- (diff)
- 7:23 AM Ticket #623 (Move selected core bundles to toolshed) created by
- 7:21 AM Ticket #622 (Develop protocol for releasing standard bundles onto toolshed) created by
- Moving parts of core out to bundles is a separate task
- 7:20 AM Ticket #621 (Core bundle refactoring) created by
- Tracking ticket for moving bundles from the core to the toolshed
- 7:19 AM Ticket #620 (Create initial bundle development example with documentation) created by
- As we get closer to beta, we're going to need to start releasing more …
- 7:17 AM Ticket #619 (Bug reporting lite) created by
- For the alpha releases, we don't want to implement a full bug …
- 7:15 AM Ticket #618 (ChimeraX bug reporting) created by
- ChimeraX needs the capability to report bugs back to us. This is a …
- 7:13 AM Ticket #617 (Registration support) created by
- 7:12 AM Ticket #616 (Add support for distance measurements) created by
- 7:11 AM Ticket #615 (Add support for 3d labels) created by
- 7:11 AM Ticket #614 (Add support for zones and attributes in atom spec) created by
- 7:10 AM Ticket #613 (Add support for find hbonds) created by
- 7:08 AM Ticket #612 (Session format: identify missing components in session files) created by
- Session files are currently incomplete (e.g. 2dLabels aren't saved). …
- 7:06 AM Ticket #611 (Session format: compare performance of msgpack vs. pickle) created by
- Once we have a msgpack session implementation, we need to compare the …
- 7:02 AM Ticket #610 (Session format: test msgpack as an alternative to pickle) created by
- 7:01 AM Ticket #609 (Session format decisions for alpha2) created by
- For alpha2, we need to get closer to the final session format. This …
Apr 5, 2017:
- 12:17 PM Ticket #608 (Cheshire cat silhouettes) closed by
- duplicate: Duplicate of #596.
- 10:20 AM Ticket #608 (Cheshire cat silhouettes) created by
- Sometimes silhouette edges are still drawn after all models are hidden.
- 10:06 AM Ticket #607 (Make silhouette edges transparent for movie fades) created by
- Begin forwarded message: From: Elaine Meng <meng@…> …
Apr 4, 2017:
- 12:15 PM Ticket #606 ("close" in this session quits ChimeraX) created by
- opening the attached session, entering command "close" causes ChimeraX …
- 11:49 AM Ticket #605 (testing notifications) closed by
- not a bug
- 11:42 AM Ticket #605 (testing notifications) created by
- test
Apr 3, 2017:
- 5:17 PM Ticket #604 (traceback trying to morph 3 structures (session attached)) closed by
- fixed: Fixed. The morph corkscrew interpolation code caused an error in the …
- 4:50 PM Ticket #604 (traceback trying to morph 3 structures (session attached)) created by
- As shown in the Log contents below, with the attached session I can …
- 3:33 PM Ticket #603 (Add support for display chain sequences) created by
- 3:32 PM Ticket #602 (Need user interface to be able to choose window configuration) created by
- per summary
- 3:29 PM Ticket #601 (Add ability to write PDB) created by
- 7:21 AM Ticket #600 (Model.metadata does not contain cell information for model from an ...) created by
- Making adjustments to the Clipper plugin to provide live-scrolling …
- 4:32 AM Ticket #599 ("Transplanting" a model loses track of children) created by
- Hi all, I'm trying to do some rearrangements of my data handling for …
Mar 30, 2017:
- 3:43 PM DeveloperMeetings edited by
- (diff)
- 3:22 PM 2017-03-30 edited by
- (diff)
- 3:05 PM 2017-03-30 edited by
- (diff)
- 2:23 PM 2017-03-30 created by
Mar 29, 2017:
- 1:16 PM Ticket #594 (converting mmcif structure to Python object runs out of memory) closed by
- fixed: Mis-translated some of the Chimera 1 code. Works now. Very slow on …
Mar 28, 2017:
- 6:59 PM Ticket #598 (Use QPainter to draw label text instead of PIL so Qt can handle fonts) created by
- Currently 2d labels are using PIL and looking for truetype fonts on …
- 12:00 AM Milestone Alpha Release completed
Mar 27, 2017:
Mar 24, 2017:
- 12:11 PM Ticket #597 (sometimes windowsize doesn't work and contents go gray) created by
- By "don't work" I mean the graphics window area does not become the …
- 12:07 PM Ticket #596 (sometimes silhouettes still shown after structures closed) created by
- Not reproducible although I have encountered it at least twice. …
- 11:38 AM Ticket #595 (Slow rendering of small 7000 atom atomic model, 2bbv) created by
- Rendering 2bbv with full lighting is surprisingly slow (11 frames per …
Mar 23, 2017:
- 6:02 PM Ticket #594 (converting mmcif structure to Python object runs out of memory) created by
- Opening copy_1_ccp4.cif (and others) from #284 give the following …
- 5:48 PM Ticket #584 (Opening 1gbp gives error setting entity descriptions) closed by
- fixed: Tweak code that handles missing entity_poly_seq to work when …
- 5:16 PM Ticket #374 (Help viewer in Qt version does not show movie) closed by
- fixed: Added OGG and WEBM codecs to ffmpeg on Linux and Mac OS X. This …
- 5:11 PM Ticket #579 (Support for tools extending 'save' command) closed by
- fixed: Already in place with ChimeraX :: Save metadata.
- 3:01 PM 2017-03-23 created by
- 2:15 PM DeveloperMeetings edited by
- (diff)
Mar 21, 2017:
- 7:03 PM Ticket #591 (traceback saving session with orthographic camera) closed by
- fixed: Fixed. Doesn't give an error now. But session code does not know how …
- 7:01 PM Ticket #593 (Save orthographic camera settings in session) created by
- Currently ortho camera is not saved in sessions. Restoring such a …
- 6:11 PM Ticket #592 (Image save 2x smaller region on Mac OS 10.9.5) created by
- The following email from Camille McAvoy suggests that ChimeraX is not …
- 4:11 PM Ticket #591 (traceback saving session with orthographic camera) created by
- If I try to save a session after "camera ortho" I get no file saved …
- 2:48 PM Ticket #590 (Increase size of window resize handles) created by
- At present attempting to resize windows by dragging edges or corners …
- 2:19 PM Ticket #589 (cartoon short-strand orientations unstable over trajectory) created by
- Obvserved during morphing but I don't think the source of the …
- 1:32 PM Ticket #588 (unstable tube orientation in morph) created by
- When I play back the morph in attached session with coordset #3 1,21 …
- 11:08 AM Ticket #587 (Chimera1/X matchmaker difference) created by
- The attached structures get much higher sequence alignment scores in …
Mar 20, 2017:
- 4:19 PM Ticket #583 (Morph atoms don't move if alt locs are present) closed by
- fixed: Fixed; implemented a 'dealtloc' structure method that morph calls …
- 1:49 PM Ticket #586 (Bonds between symmetry partners) created by
- The "sym" command should establish bonds between symmetry partners …
- 12:05 PM Ticket #585 (RFE: add cartoon-style helix tube radius option) created by
- I recommend adding an option to “cartoon style” to allow specifying a …
Mar 17, 2017:
- 6:58 PM Ticket #584 (Opening 1gbp gives error setting entity descriptions) created by
- open 1gbp Traceback (most recent call last): File …
- 6:22 PM Ticket #583 (Morph atoms don't move if alt locs are present) created by
- open 2fw0 open 2hph mm #2 to #1 morph #1,2 show #3 coordset #3 1,21 …
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