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Timeline
Jan 16, 2026: Today
- 9:39 PM Ticket #19742 (ChimeraX bug report submission) created by
- […]
- 4:50 PM Ticket #19741 (Claude prompts that are useful and work reliably) created by
- It will be helpful in making a video to show Claude control of …
- 2:14 PM Ticket #19740 (ChimeraX bug report submission) created by
- […]
- 12:53 PM Ticket #19739 (Crash dragging AltLoc explorer tool window over other docked tools) closed by
- duplicate
- 12:50 PM Ticket #19736 (Crash resizing window in QDockWidget::event()) closed by
- duplicate: I wonder if this is from dragging a Tool window like the crash #19077. …
- 12:48 PM Ticket #19739 (Crash dragging AltLoc explorer tool window over other docked tools) created by
- […]
- 12:41 PM Ticket #19735 (Crash when window moved and/or maximized in QDockWidget::event()) closed by
- duplicate: Since December we have seen a dozen reports of this crash in …
- 12:39 PM Ticket #19738 (ChimeraX bug report submission) created by
- […]
- 12:06 PM Ticket #19737 (Volume viewer histogram markers invisible in image style) created by
- […]
- 9:40 AM Ticket #19736 (Crash resizing window in QDockWidget::event()) created by
- […]
- 7:44 AM Ticket #19735 (Crash when window moved and/or maximized in QDockWidget::event()) created by
- […]
Jan 15, 2026: Yesterday
- 5:13 PM ChangeLog edited by
- (diff)
- 12:04 PM DeveloperMeetings edited by
- (diff)
- 11:34 AM Ticket #19734 (Missing SNFG depictions) created by
- […]
- 11:33 AM Ticket #19733 ("material" does not accept "specularExponent" keyword) created by
- […]
- 6:55 AM Ticket #19732 (Changing between light mode and dark mode after volume viewer closed: ...) created by
- […]
Jan 14, 2026:
- 2:23 PM Ticket #19731 (Error installing ChimeraX daily build (Dec 16, 2025 ) on Fedora 43 ...) created by
- […]
- 12:51 PM Ticket #19730 (alphafold interfaces: bad log links) closed by
- fixed: Fixed in ChimeraX daily build Jan 14 or newer. The alphafold …
- 6:14 AM Ticket #19730 (alphafold interfaces: bad log links) created by
- […]
Jan 13, 2026:
- 11:13 PM Ticket #19729 (XMAS: 'Tabular' object has no attribute 'peptide_pairs') created by
- […]
- 5:49 PM Ticket #19727 (Minimization template failure) closed by
- fixed: I don't think OpenMM likes non-unique names in a residue, and the …
- 3:48 PM Ticket #17899 (UniProt sequences should retain numbering) closed by
- fixed: UniProt sequence numberings will no longer change to correspond to …
- 2:42 PM Ticket #19728 (Crash resizing window in QDockWidget::event()) closed by
- duplicate: Oops
- 12:07 PM Ticket #19728 (Crash resizing window in QDockWidget::event()) created by
- […]
- 11:24 AM Ticket #19722 (boltz predict on RunPod: connection refused or RuntimeError) closed by
- can't reproduce: This is from Beau in biophysics class trying to use Boltz on RunPod at …
- 11:12 AM 2026-1-15 created by
- 11:10 AM DeveloperMeetings edited by
- (diff)
- 11:05 AM Ticket #19727 (Minimization template failure) created by
- Complaint about duplicate template with attached session
- 10:08 AM Ticket #19726 (Crash using open/save dialog) created by
- […] alpha fold prediction of HsVSP2-beta.cxs
- 9:28 AM Ticket #19725 (Crash using open/save dialog) created by
- […]
- 2:22 AM Ticket #19724 (XMAS: Attempted to add model to scene twice) created by
- […]
- 2:21 AM Ticket #19723 (XMAS: 'Tabular' object has no attribute 'peptide_pairs') created by
- […]
- 12:09 AM Ticket #19722 (boltz predict on RunPod: connection refused or RuntimeError) created by
- […]
Jan 12, 2026:
- 5:05 PM Ticket #19721 (email2trac bug) created by
- The unique_attachment_names() function in email2trac is looking for …
- 4:59 PM Dev2026-01-12 edited by
- (diff)
- 4:53 PM Dev2026-01-12 edited by
- (diff)
- 2:54 PM Dev2026-01-12 edited by
- (diff)
- 1:00 PM Ticket #5416 (Put checksums from download page on a separate page) closed by
- fixed
- 12:50 PM Ticket #19720 (Crash in event loop in QDockWidget::event() while using Segger) closed by
- duplicate
- 12:19 PM Dev2026-01-12 edited by
- (diff)
- 12:06 PM Ticket #19720 (Crash in event loop in QDockWidget::event() while using Segger) created by
- […]
- 11:46 AM Ticket #19719 (SEQCROW: Gaussian16 'all_geom' is None) created by
- […]
- 11:30 AM Ticket #19715 (measure mapvalues with empty 'atoms': ValueError: zero-size array to ...) closed by
- fixed: Fixed. If you use command measure mapvalues with no atoms specified …
- 11:09 AM Ticket #19718 (Incorrect initial scaling on spatial display) created by
- […] images.zip
- 12:25 AM Ticket #19717 (Orthoplanes: drawing parent is None) created by
- […]
Jan 11, 2026:
- 12:14 PM Dev2026-01-12 created by
- 12:12 PM DeveloperMeetings edited by
- (diff)
- 12:10 PM DeveloperMeetings edited by
- (diff)
- 12:10 PM DeveloperMeetings2025 created by
- 12:09 PM GroupMeetings2025 created by
Jan 10, 2026:
- 10:04 PM Ticket #19716 (Various Modeller errors) created by
- […]
- 9:31 PM Ticket #17506 ("devel build" run twice, crashes) closed by
- fixed
- 6:19 PM Ticket #19715 (measure mapvalues with empty 'atoms': ValueError: zero-size array to ...) created by
- […]
Jan 9, 2026:
- 5:05 PM Ticket #19711 (boltz predict: RuntimeError, ChimeraX not getting job id from RunPod ...) closed by
- can't reproduce: This report where Keana gets a RuntimeError indicating ChimeraX did …
- 5:02 PM Ticket #19710 (boltz predict on RunPod: Broken pipe) closed by
- limitation
- 5:00 PM Ticket #19714 (boltz predict: TimeoutError) closed by
- can't reproduce: Keana says at 4:07 pm it ran correctly for her. I also installed …
- 3:24 PM Ticket #19714 (boltz predict: TimeoutError) created by
- […]
- 1:54 PM Ticket #19100 (UnboundLocalError: cannot access local variable 'dirs' where it is not ...) closed by
- fixed: I think that's dead code. os.walk is already walking through …
- 1:52 PM Ticket #19546 (CiliaBuilder: scipy missing symbol in macOS 12) closed by
- fixed: Updated daily builds (starting with tomorrow's) so that Intel macs …
- 1:43 PM Ticket #16267 (Duplicate drawings break orthoplane viewers) closed by
- fixed: I added a hack in the segmentations code that removes the volumes it …
- 1:33 PM Ticket #19712 (Crash when window moved and/or maximized) closed by
- can't reproduce: Geometry change event, then dying in QDockWidget::event() on macOS …
- 12:28 PM Ticket #19713 (MRC header field settings) created by
- […]
- 12:23 PM Ticket #19712 (Crash when window moved and/or maximized) created by
- […]
- 11:06 AM Ticket #19709 (Crash in swap_buffers waking from sleep on Mac, macOS 26.1) closed by
- duplicate: Crash in OpenGL swap_buffers after status line expose event in …
- 11:03 AM Ticket #19705 (Crash + problem submitting bug report) closed by
- can't reproduce: ChimeraX crashed in the Qt window toolkit event loop, not in any …
- 10:52 AM Ticket #19711 (boltz predict: RuntimeError, ChimeraX not getting job id from RunPod ...) created by
- […] Screenshot 2026-01-09 at 10.49.26 AM.png
- 10:24 AM Ticket #19710 (boltz predict on RunPod: Broken pipe) created by
- […] Screenshot 2026-01-09 at 10.22.49 AM.png
- 1:12 AM Ticket #19193 (Read DICOM: 'rsi' is None) closed by
- can't reproduce: I would have to see the data to have any hopes of debugging this.
- 12:56 AM Ticket #19707 (Boltz prediction does not stop running when status message gets a ...) closed by
- fixed: Fixed. Made errors when querying job status halt the prediction so …
- 12:50 AM Ticket #19045 (Document info about checking web service/queue status) closed by
- fixed: I added some text about how to figure out what node they're running on …
- 12:49 AM WebJobInfo edited by
- (diff)
- 12:48 AM WebJobInfo edited by
- (diff)
- 12:43 AM Ticket #19088 (ffmpeg: Permission Denied) closed by
- fixed: 1.11 shouldn't be affected.
- 12:15 AM Ticket #19709 (Crash in swap_buffers waking from sleep on Mac, macOS 26.1) created by
- […]
- 12:02 AM Ticket #19708 (RunPod is a poor cloud GPU service for running a Boltz server) created by
- I tried to use RunPod.io cloud GPU service to run Boltz prediction …
Jan 8, 2026:
- 11:40 PM Ticket #18180 (Unable to restore session, blastprotein missing argument, ChimeraX 1.3) closed by
- can't reproduce: No way to contact the user for the session.
- 11:27 PM Ticket #19698 (boltz predict: RuntimeError) closed by
- nonchimerax: This was reported 3 times in today's macromethods class and possibly …
- 11:16 PM Ticket #19701 (boltz predict: RuntimeError) closed by
- duplicate: Duplicate of #19698
- 11:15 PM Ticket #19699 (boltz predict: RuntimeError) closed by
- duplicate: Duplicate of #19698
- 11:14 PM Ticket #19700 (boltz predict: socket.gaierror: [Errno 8] nodename nor servname ...) closed by
- fixed: I added a clear error message saying that the ChimeraX could not find …
- 10:53 PM Ticket #19706 (UCSF Guest wifi blocks connections to a boltz server) closed by
- limitation: Appears from the UCSF Guest wifi web that it only allows a few …
- 10:47 PM Ticket #19702 (Crash on Mac waking from sleep) closed by
- duplicate: The ChimeraX bug report panel said what we know about this crash: …
- 7:06 PM Ticket #19707 (Boltz prediction does not stop running when status message gets a ...) created by
- […]
- 5:12 PM Ticket #19706 (UCSF Guest wifi blocks connections to a boltz server) created by
- […]
- 3:34 PM Ticket #19705 (Crash + problem submitting bug report) created by
- […]
- 2:18 PM Ticket #19704 (What happens if Boltz server closes the connection on a submitted job ...) created by
- […]
- 2:10 PM Ticket #19077 (Dragging Altloc tool rapidly up and down over Log and Model Panel crashes) closed by
- fixed: Updated to PyQt6 6.10.2 / QtWebEngine 6.10.0
- 2:09 PM Ticket #19078 (Stacked tools do not show tab buttons Mac Qt 6.9.2) closed by
- fixed: Updated to PyQt6 6.10.2 / QtWebEngine 6.10.0
- 1:56 PM Ticket #19703 (Boltz server error: No such file or directory: '/root/boltz22/bin/boltz') created by
- […]
- 12:48 PM Ticket #19702 (Crash on Mac waking from sleep) created by
- […]
- 11:37 AM Ticket #19701 (boltz predict: RuntimeError) created by
- […]
- 11:31 AM Ticket #19700 (boltz predict: socket.gaierror: [Errno 8] nodename nor servname ...) created by
- […]
- 11:27 AM Ticket #19699 (boltz predict: RuntimeError) created by
- […]
- 11:23 AM Ticket #19698 (boltz predict: RuntimeError) created by
- […]
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