![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Timeline
Mar 3, 2016:
- 5:54 PM Ticket #302 (Is installed application linking to build location libraries?) created by
- This question came up several months ago where some crashes appeared …
- 3:33 PM 2016-03-03 edited by
- (diff)
- 2:24 PM 2016-03-03 created by
- 2:01 PM DeveloperMeetings edited by
- (diff)
Mar 2, 2016:
Mar 1, 2016:
- 11:44 AM Ticket #301 (No session restore of global pseudobonds) created by
- Restoring a session does not restore global pseudobonds in today's …
Feb 29, 2016:
- 2:29 PM Ticket #300 (Control over tool (and data ownership) used when data opened) created by
- Need a 'tool' keyword in the "open" command to control which tool or …
- 2:20 PM Ticket #299 (Ability to add tool-specific keywords to open command) created by
- If a tool needs additional info in order to open/display data, it may …
Feb 26, 2016:
- 3:19 PM Ticket #231 (Build does not see atomstruct_cpp changes causing crashes) closed by
- fixed: Added a bunch of dependencies and removed unused headers
Feb 25, 2016:
- 4:17 PM DeveloperMeetings edited by
- (diff)
- 3:20 PM 2016-02-25 created by
- 12:55 PM Ticket #298 ("color name existing-name" no longer shows definition of built-in colors) closed by
- fixed: Separated 'color name' into 'color show <rest of line>' and 'color …
- 10:39 AM Ticket #298 ("color name existing-name" no longer shows definition of built-in colors) created by
- One used to be able to show the definition of a color with color name …
- 10:18 AM Ticket #297 (RFE: add cartoon (ribbon) presets) created by
- Would be nice to some cartoon style presets. Some possibilities for …
Feb 23, 2016:
- 1:41 PM Ticket #248 (Treat quick links as if they were typed) closed by
- fixed: Actually have the command line execute the command.
- 1:24 PM Ticket #169 (deleting chain doesn't delete its cartoon) reopened by
- This bug is back. When atoms are deleted and ribbon is not deleted it …
- 12:53 PM Ticket #296 (MAV: co-variance analysis) created by
- Completely different suggestion which may not be feasible and would …
- 12:50 PM Ticket #295 (MD: built-in trajectory smoothing) created by
- May I use the opportunity to ask for implementing a functionality in …
Feb 22, 2016:
- 5:08 PM Ticket #293 (Command line parsing error when Python shell open) closed by
- fixed: Worked around by extending wx's PseudoFile class (the base class of …
- 2:21 PM Ticket #294 (Zoom rectangle mouse mode) created by
- Drag a rectangle and zoom to that rectangle. Maybe this would be a …
- 2:17 PM Ticket #293 (Command line parsing error when Python shell open) created by
- open 3fx2 -- start Python shell -- color blue produces: Traceback …
- 1:48 PM Ticket #292 (Toggle display of all maps) created by
- Oliver wants to be able to hide all maps, then later reshow just the …
- 11:28 AM Ticket #254 (Crash deleting global pseudobond group) closed by
- fixed
Feb 19, 2016:
- 12:16 AM Ticket #291 (mmCIF bad _struct_conn table written by CCP4) closed by
- fixed: Log warning saying table was skipped, instead of failing.
Feb 18, 2016:
- 5:17 PM Ticket #291 (mmCIF bad _struct_conn table written by CCP4) created by
- Oliver Clarke provided the attached mmCIF file written by CCP4 which …
- 3:25 PM 2016-02-18 edited by
- (diff)
- 2:41 PM 2016-02-18 edited by
- (diff)
- 2:24 PM 2016-02-18 edited by
- (diff)
- 2:09 PM 2016-02-18 edited by
- (diff)
- 2:07 PM 2016-02-18 edited by
- (diff)
- 2:06 PM 2016-02-18 created by
- 2:06 PM DeveloperMeetings edited by
- (diff)
- 12:43 PM Ticket #290 (can't select dashed lines) created by
- Open 134d, neither the hydrogen bonds nor the missing structure bonds …
- 11:04 AM Ticket #289 (make "usage" more useful for internal aliases) created by
- I noticed that “usage” isn’t very useful for aliases, e.g. “usage ts” …
- 9:44 AM Ticket #288 (Circle plots to show pairwise quantities for domains, chains, ...) created by
- Begin forwarded message: From: Oliver Clarke Subject: ChimeraX …
- 9:26 AM Ticket #279 (Hiding ribbons does not redisplay hidden backbone atoms) closed by
- fixed: Actually it's the bonds that do not get restored. Should be fixed now.
Feb 17, 2016:
- 1:26 PM Ticket #284 (handle mmCIF with missing sequence information) reopened by
- I've attached another mmCIF file copy_1.cif from Oliver Clarke, this …
Feb 16, 2016:
- 4:25 PM Ticket #284 (handle mmCIF with missing sequence information) closed by
- wontfix: So this bug report was good in that support for mmCIF files with an …
- 4:03 PM Ticket #287 (Image save shortcut, use different file names) created by
- Make icon that saves image use a different image file name each time …
- 2:20 PM Ticket #286 (Difference maps with local fitting) created by
- Begin forwarded message: From: Oliver Clarke Subject: Re: ChimeraX …
- 2:18 PM Ticket #285 (Optimize map grid size based on fit of atomic model) created by
- Begin forwarded message: From: Oliver Clarke Subject: ChimeraX …
- 12:33 PM Ticket #284 (handle mmCIF with missing sequence information) created by
- mmCIF file in #278 is missing the entity_poly_seq table, so the code …
- 12:30 PM Ticket #278 (Leading spaces in atom names from mmCIF file) closed by
- fixed: Added code to strip leading and trailing spaces.
- 12:18 PM Ticket #283 (Curved helix tubes) created by
- Begin forwarded message: From: Oliver Clarke Subject: Possible …
- 12:15 PM Ticket #282 (Ribbon style editor, scaling and helix/coil/strand cross-sections) created by
- Begin forwarded message: From: Oliver Clarke Subject: Possible …
- 12:09 PM Ticket #281 (Merge command-line and Python shell) created by
- Allow typed Python code in the command-line and/or allow typed …
- 12:01 PM Ticket #280 (Show density map only near center of view, like Coot) created by
- Oliver asks for map display only near center of view, the typical Coot …
- 11:43 AM Ticket #277 (Collating log repeats collation messages loading mmCIF) closed by
- fixed: Missed one of the self._sim_info -> sim_info changes.
- 10:41 AM Ticket #279 (Hiding ribbons does not redisplay hidden backbone atoms) created by
- open 1b35 show ~cartoon All the residues are shown disconnected with …
- 10:11 AM Ticket #278 (Leading spaces in atom names from mmCIF file) created by
- The attached mmCIF file (produced by Coot) does not connect any of the …
- 10:05 AM Ticket #277 (Collating log repeats collation messages loading mmCIF) created by
- Loading an mmcif file repeats the same message "27 messages similar to …
Feb 12, 2016:
- 11:27 AM Ticket #275 (mmCIF reader can produce NaN atom coords with no error) closed by
- fixed: Warn about and skip atoms with unspecified coordinates in mmCIF files.
- 11:09 AM Ticket #276 (Can't read mmCIF with lowercase cartn_x field name) closed by
- fixed: Modified readcif code to treat category tags as case insensitive.
- 10:06 AM Ticket #276 (Can't read mmCIF with lowercase cartn_x field name) created by
- I got an mmcif file written by Coot that used _atom_site.cartn_x as a …
Feb 11, 2016:
- 7:26 PM Ticket #275 (mmCIF reader can produce NaN atom coords with no error) created by
- If an mmCIF model has ? for _atom_site.Cartn_x values then the reader …
- 3:32 PM 2016-02-11 edited by
- (diff)
- 2:54 PM 2016-02-11 edited by
- (diff)
- 1:33 PM DeveloperMeetings edited by
- (diff)
- 1:32 PM 2016-02-11 created by
- 11:49 AM 2016-02-04 edited by
- (diff)
Feb 10, 2016:
- 11:58 AM Ticket #274 (Select through transparent surface or mesh) created by
- Begin forwarded message: From: Oliver Clarke Subject: …
- 11:57 AM Ticket #273 (Update atom spec balloon immediately if modifier key held down) created by
- Begin forwarded message: From: Oliver Clarke <> Subject: …
Feb 8, 2016:
- 2:55 PM Ticket #269 (running of stack deleting bonds) closed by
- fixed: Fixed
- 2:54 PM Ticket #270 (atom in_chain false after session restore) closed by
- fixed: Wasn't setting the residue pointer to the chain as the chain was restored
Feb 5, 2016:
- 2:18 PM Ticket #272 (No help if command only has subcommands) created by
- Using the help command on a command which only has subcommands, like …
- 2:15 PM Ticket #271 (Closing tabbed wx panel crashes, Mac) created by
- Closing a tabbed wx panel using its title-bar close button crashes the …
Feb 4, 2016:
- 7:19 PM Ticket #270 (atom in_chain false after session restore) created by
- If I save a molecule in a session, then restore the session, …
- 6:05 PM 2016-02-04 edited by
- (diff)
- 4:47 PM Ticket #269 (running of stack deleting bonds) created by
- "open 101d format pdb" causes ChimeraX to segfault. Using gdb, the …
- 4:15 PM Ticket #268 (cartoon short strands not smoothed or smoothable) created by
- Cartoon of short strands is not smoothed regardless of "adjust" …
- 3:11 PM DeveloperMeetings edited by
- (diff)
- 3:11 PM 2016-02-04 created by
Feb 2, 2016:
- 2:04 PM Ticket #267 (Mistaken "bound ligand" in 1fav) created by
- In 1fav, residues 123 and 124 are being treated as bound ligand when …
Note:
See TracTimeline
for information about the timeline view.
