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#278 closed defect (fixed)
Leading spaces in atom names from mmCIF file
| Reported by: | Tom Goddard | Owned by: | Greg Couch |
|---|---|---|---|
| Priority: | major | Milestone: | |
| Component: | Input/Output | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The attached mmCIF file (produced by Coot) does not connect any of the residues apparently because the atom names in the mmCIF file are quoted, e.g. " CA " with leading an trailing white space. So command
select @CA
selects nothing because the CA atom names all have spaces in them. Probably we should strip leading and trailing white space in the names.
Attachments (1)
Change History (3)
by , 10 years ago
| Attachment: | feb11_fit.cif added |
|---|
comment:1 by , 10 years ago
| Resolution: | → fixed |
|---|---|
| Status: | new → closed |
comment:2 by , 7 years ago
| Component: | mmCIF Reader/Writer → Input/Output |
|---|
reducing # of categories, so lumping into I/O category
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Added code to strip leading and trailing spaces.