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Timeline
Mar 15, 2018:
- 5:53 PM Ticket #1028 (nucleotides ladder: limit to only displayed residues?) closed by
- fixed: Fixed. Also fixed bug where adding nucleotides after removing all …
- 4:53 PM Ticket #690 (Custom atom/residue properties?) reopened by
- The current implementation has a session-restore race condition and …
- 3:17 PM 2018-03-15 created by
- 2:07 PM DeveloperMeetings edited by
- (diff)
- 12:58 PM Ticket #985 (persistent nucleotide slabs after deleting chain) closed by
- fixed: Fixed. Added deletions to cases where the nucleotides are recomputed.
- 12:46 PM Ticket #1059 ("changes" trigger is not firing correctly) closed by
- fixed: Tristan's proposed fix does indeed fix the problem.
- 11:42 AM Ticket #1060 (Error assigning atom coordinate from a tuple) closed by
- fixed
- 11:22 AM Ticket #1060 (Error assigning atom coordinate from a tuple) created by
- IHM reader is broken by Cython changes because atom coordinate cannot …
- 10:41 AM Ticket #1058 (Collection caching bug?) closed by
- fixed: Fixed. If collection has fewer objects than in cached list then don't …
- 7:24 AM Ticket #1059 ("changes" trigger is not firing correctly) created by
- […] I'm quite heavily reliant on the 'changes' trigger, so this is …
Mar 14, 2018:
- 4:53 PM Ticket #1058 (Collection caching bug?) created by
- The Collection.iter method caches the objects it creates. This …
- 4:20 PM Ticket #690 (Custom atom/residue properties?) closed by
- fixed: Pseudobond now supported, which finishes the classes I intend to …
- 2:52 PM ChangeLog edited by
- (diff)
- 2:49 PM ChangeLog edited by
- (diff)
- 1:21 PM Ticket #1051 (Convert atoms/elements ctypes interface to Cython interface) closed by
- fixed
- 8:14 AM Ticket #1057 (Provide C++ API to _geometry functions) created by
-
Most of the headers in core.geometry._geometry provide
extern "C"…
Mar 9, 2018:
- 1:09 PM Ticket #1056 (Crash in read_pdb_file() C++ opening nuclear pore IHM model) closed by
- can't reproduce: In my build, I opened it three times without error. Need more to go …
- 12:46 PM Ticket #1056 (Crash in read_pdb_file() C++ opening nuclear pore IHM model) created by
- Opening the attached IHM model causes ChimeraX to crash in C++ …
- 9:34 AM Ticket #1055 (First "show selAtoms" command is ignored) closed by
- duplicate: This was fixed yesterday, but the nightly builds all failed. …
- 8:56 AM Ticket #1055 (First "show selAtoms" command is ignored) created by
- After starting ChimeraX and loading a protein small enough to appear …
Mar 8, 2018:
- 3:54 PM 2018-03-08 edited by
- (diff)
- 2:48 PM ChangeLog edited by
- (diff)
- 2:41 PM 2018-03-08 created by
- 2:05 PM DeveloperMeetings edited by
- (diff)
- 1:36 PM Ticket #1053 (Registered selectors not working on first use) closed by
- fixed: Fixed in 3c8b57300. Previously, only functions could be …
- 12:27 PM ChangeLog edited by
- (diff)
- 12:10 PM ChangeLog edited by
- (diff)
- 12:06 PM Ticket #1054 (command "open" doesn't work on URLs without suffix) created by
- For example, open http://www.rbvi.ucsf.edu/chimera Missing filename …
Mar 7, 2018:
- 5:40 PM Ticket #1023 (Faster change tracking) closed by
- fixed: The second set seems okay as well. I've committed them as well. --Eric
- 5:27 PM Ticket #913 (help command with absolute path to html does not work) closed by
- fixed: I believe that changed. The command is now "open …
- 3:12 PM FAI edited by
- (diff)
- 2:30 PM Ticket #914 (Write mmCIF file) closed by
- fixed: Initial mmCIF writing is in. It is at level V7 mmCIFWriting.
- 1:43 PM mmCIFWriting edited by
- (diff)
Mar 6, 2018:
- 5:42 PM Ticket #1053 (Registered selectors not working on first use) created by
- open 1a0m show selAtoms show selAtoms should show all the atoms on …
- 1:03 PM Ticket #1052 (Make starting directory ~/Desktop when launching from icon.) closed by
- fixed: Fixed. Implemented idea in previous comment.
Mar 5, 2018:
- 6:52 PM Ticket #1052 (Make starting directory ~/Desktop when launching from icon.) created by
- On macOS double clicking the ChimeraX icon starts it in directory "/" …
- 2:00 PM Ticket #1051 (Convert atoms/elements ctypes interface to Cython interface) created by
- Improve performance.
- 1:58 PM Ticket #1050 (Move core packages into bundles) created by
- Four packages should be moved from core to bundles: ui, atomic, map …
- 1:53 PM Ticket #908 (Stringdb bug) closed by
- fixed: Generate a better error message, instead of a Python traceback, when …
Mar 3, 2018:
Mar 2, 2018:
- 4:38 PM Ticket #1049 (RE: VR ON bug in latest release) created by
- […]
- 4:22 PM Ticket #1048 (Re: VR ON bug in latest release) created by
- […]
- 4:13 PM Ticket #1047 (VR ON bug in latest release) created by
- […]
- 4:13 PM Ticket #1046 (VR ON bug in latest release) created by
- […]
Mar 1, 2018:
- 9:03 AM Ticket #1044 (Need "ribbon drawing finished" trigger) closed by
- not a bug: Ah - never mind. Turns out the 'frame drawn' trigger was what I was …
Feb 28, 2018:
- 12:27 PM Ticket #1045 (Nucleic matchmaker error) created by
- […] Screen Shot 2018-02-28 at 3.23.57 PM.png
Feb 27, 2018:
- 4:40 AM Ticket #1044 (Need "ribbon drawing finished" trigger) created by
- To provide live symmetry visualisation for ribbons it looks to me like …
- 1:23 AM Ticket #1043 (Isolde error: no rotamers) closed by
- nonchimerax: Will continue any further discussion off-list.
Feb 26, 2018:
Feb 23, 2018:
Feb 22, 2018:
- 6:05 PM Ticket #1036 (Marker placement and resizing bug) closed by
- fixed: Fixed in tonight's ChimeraX builds. Thanks for movie and session …
- 4:34 PM Ticket #1042 (Open file dialog spews debugging info on Windows) created by
- Using the Open File menu entry causes log entries that appear to be …
- 3:02 PM 2018-02-22 created by
- 2:14 PM DeveloperMeetings edited by
- (diff)
Feb 21, 2018:
- 12:25 PM Ticket #1038 (Atom DrawMode Python values out of sync with C++ enum) closed by
- fixed: Good catch. I have changed the C++ to match Python.
Feb 20, 2018:
- 7:31 AM Ticket #1041 (Surprising slowdown when drawing multiple drawings) created by
- I have a Distance_Restraint_Mgr class, where the relevant code for …
Feb 18, 2018:
Feb 16, 2018:
- 3:24 PM Ticket #1039 (inconsistent behavior for residue collections) created by
- Open 3fx2, in the Python Shell: In: m = session.models[0] In: …
- 4:47 AM Ticket #1038 (Atom DrawMode Python values out of sync with C++ enum) created by
- in C++: {{{ enum class DrawMode: unsigned char { Sphere, EndCap, …
Feb 15, 2018:
- 4:11 PM ChangeLog edited by
- (diff)
- 3:49 PM Ticket #1037 (RE: Marker placement and resizing bug) closed by
- duplicate: Actually a followup to #1036
- 3:45 PM Ticket #1037 (RE: Marker placement and resizing bug) created by
- […]
- 3:44 PM Ticket #1036 (Marker placement and resizing bug) created by
- […]
- 9:56 AM Ticket #1035 (some docked dialogs persist in "full window" mode and block small ...) created by
- Not completely sure this is a bug, but it's an inconvenience if you …
- 6:07 AM Ticket #1034 (allow glycine CAs to be shown with ribbon) created by
- At the moment, when both ribbon and atoms are shown (with backbone …
Feb 14, 2018:
- 12:24 PM Ticket #1031 (List download size of images) closed by
- fixed: Daily builds now report download sizes. Release build information is …
- 11:28 AM Ticket #1033 (Possible bug in half_cylinder_rotations) closed by
- wontfix: The resulting error is pretty easy to debug and I have no easy way to …
- 4:27 AM Ticket #1033 (Possible bug in half_cylinder_rotations) created by
- I call it a "possible bug" since it's only arisen for me since I …
Feb 13, 2018:
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