Timeline



Feb 23, 2018:

12:07 AM Ticket #653 (Odd library problem installing OpenMM 7.1.0) closed by Tristan Croll
fixed

Feb 22, 2018:

6:05 PM Ticket #1036 (Marker placement and resizing bug) closed by Tom Goddard
fixed: Fixed in tonight's ChimeraX builds. Thanks for movie and session …
4:34 PM Ticket #1042 (Open file dialog spews debugging info on Windows) created by Tom Goddard
Using the Open File menu entry causes log entries that appear to be …
3:02 PM 2018-02-22 created by Conrad Huang
2:14 PM DeveloperMeetings edited by Conrad Huang
(diff)

Feb 21, 2018:

12:25 PM Ticket #1038 (Atom DrawMode Python values out of sync with C++ enum) closed by pett
fixed: Good catch. I have changed the C++ to match Python.

Feb 20, 2018:

7:31 AM Ticket #1041 (Surprising slowdown when drawing multiple drawings) created by Tristan Croll
I have a Distance_Restraint_Mgr class, where the relevant code for …

Feb 18, 2018:

10:39 AM Ticket #1040 (OpenGL version not recognized) created by dziemian@…
[…]

Feb 16, 2018:

3:24 PM Ticket #1039 (inconsistent behavior for residue collections) created by Greg Couch
Open 3fx2, in the Python Shell: In: m = session.models[0] In: …
4:47 AM Ticket #1038 (Atom DrawMode Python values out of sync with C++ enum) created by Tristan Croll
in C++: {{{ enum class DrawMode: unsigned char { Sphere, EndCap, …

Feb 15, 2018:

4:11 PM ChangeLog edited by Elaine Meng
(diff)
3:49 PM Ticket #1037 (RE: Marker placement and resizing bug) closed by pett
duplicate: Actually a followup to #1036
3:45 PM Ticket #1037 (RE: Marker placement and resizing bug) created by Meelad.Amouzgar@…
[…]
3:44 PM Ticket #1036 (Marker placement and resizing bug) created by Meelad.Amouzgar@…
[…]
9:56 AM Ticket #1035 (some docked dialogs persist in "full window" mode and block small ...) created by Elaine Meng
Not completely sure this is a bug, but it's an inconvenience if you …
6:07 AM Ticket #1034 (allow glycine CAs to be shown with ribbon) created by Tristan Croll
At the moment, when both ribbon and atoms are shown (with backbone …

Feb 14, 2018:

12:24 PM Ticket #1031 (List download size of images) closed by Conrad Huang
fixed: Daily builds now report download sizes. Release build information is …
11:28 AM Ticket #1033 (Possible bug in half_cylinder_rotations) closed by Tom Goddard
wontfix: The resulting error is pretty easy to debug and I have no easy way to …
4:27 AM Ticket #1033 (Possible bug in half_cylinder_rotations) created by Tristan Croll
I call it a "possible bug" since it's only arisen for me since I …

Feb 13, 2018:

12:40 PM Ticket #1032 (attempting VR) created by jlopez99@…
[…]

Feb 12, 2018:

2:42 PM Ticket #1031 (List download size of images) created by pett
The Chimera site lists the download size of the various versions but …
10:42 AM Ticket #1030 (make "info" report metadata; upon opening file, provide "info" ...) created by Elaine Meng
Currently some metadata like citation is automatically given in the …
10:31 AM Ticket #1029 (nucleotides undo) created by Elaine Meng
Make nucleotides work with undo.
10:30 AM Ticket #1028 (nucleotides ladder: limit to only displayed residues?) created by Elaine Meng
When I only have certain residues displayed (residues 3 and 22 in …

Feb 8, 2018:

2:58 PM 2018-02-08 edited by Conrad Huang
(diff)
1:58 PM 2018-02-08 edited by Conrad Huang
(diff)
1:56 PM Ticket #1026 (typeError trying to use "fitmap" global search) closed by Tom Goddard
fixed: Fixed.
1:24 PM 2018-02-08 created by Conrad Huang
1:21 PM Ticket #1027 ("like" operator in atomspec) created by Conrad Huang
In an assembly, it would be nice to be able to select chains based on …
1:14 PM DeveloperMeetings edited by Conrad Huang
(diff)
12:12 PM Ticket #1025 (opening non-mmCIF tries to find mmCIF metadata) closed by Greg Couch
fixed: Limit trying to show citation to structures. Only knows about mmCIF …
12:03 PM Ticket #1026 (typeError trying to use "fitmap" global search) created by Elaine Meng
Maybe I did something wrong? open emdb:4151 open 5m2n fitmap #2 in #1 …
10:57 AM Ticket #1025 (opening non-mmCIF tries to find mmCIF metadata) created by Elaine Meng
For example, open emdb:1024 Traceback (most recent call last): …
4:12 AM Ticket #1024 (Add infrastructure such as locks to support C++ thread use) created by Tristan Croll
At the moment this is mostly for the purpose of planning ahead rather …

Feb 7, 2018:

11:45 PM Ticket #968 (nucleotides not saved in sessions) closed by Greg Couch
fixed
10:41 PM mmCIFWriting edited by Greg Couch
(diff)
2:04 PM 2018-01-25 edited by pett
(diff)
2:01 PM 2018-01-25 edited by pett
(diff)
1:42 PM 2018-01-25 edited by pett
(diff)
11:22 AM 2018-01-25 edited by pett
(diff)
11:21 AM 2018-01-25 edited by pett
(diff)
11:20 AM 2018-01-25 edited by pett
(diff)
10:15 AM Ticket #1023 (Faster change tracking) created by Tristan Croll
I've been playing around to see how coordinates in particular, and …
1:22 AM Ticket #1022 (Allow Toolshed bundles to provide access to their C++ API) created by Tristan Croll
As part of my push to optimise ISOLDE's inner workings I've created a …

Feb 6, 2018:

5:10 PM 2018-01-25 edited by pett
(diff)
5:09 PM 2018-01-25 edited by pett
(diff)
4:54 PM 2018-01-25 edited by pett
(diff)
1:07 PM Ticket #1021 (Compute auxiliary secondary structure info) created by pett
on demand
1:06 PM 2018-01-25 edited by pett
(diff)

Feb 5, 2018:

5:17 PM 2018-02-05 created by Tom Ferrin
5:10 PM DeveloperMeetings edited by Tom Ferrin
(diff)
4:20 PM mmCIFWriting edited by Greg Couch
(diff)
4:19 PM Ticket #1013 ("info models" gives traceback if attr name incorrect) closed by Conrad Huang
fixed: Fixed in dbc542fc9. Undefined attribute values are now …
2:30 PM 2018-01-25 edited by pett
(diff)
2:27 PM 2018-01-25 edited by pett
(diff)
2:26 PM 2018-01-25 edited by pett
(diff)
1:05 PM Ticket #923 (ViewDockX bundle) closed by Conrad Huang
fixed: Done
11:43 AM mmCIFWriting edited by Greg Couch
(diff)
11:12 AM mmCIFWriting created by Greg Couch
10:35 AM WikiStart edited by Greg Couch
(diff)

Feb 2, 2018:

4:47 PM ChangeLog edited by Elaine Meng
(diff)
4:19 PM 2018-01-25 edited by pett
(diff)
4:05 PM 2018-01-25 edited by pett
(diff)
4:05 PM 2018-01-25 edited by pett
(diff)
10:13 AM 2018-01-25 edited by pett
(diff)
10:10 AM 2018-01-25 edited by pett
(diff)

Feb 1, 2018:

4:14 PM Ticket #1020 (OpenGL 3.3 not available) reopened by Greg Couch
The bug is that there was a traceback.
4:10 PM Ticket #1020 (OpenGL 3.3 not available) closed by Tom Goddard
nonchimerax: Your graphics driver only supports OpenGL version 3.0, which is a 10 …
10:33 AM Ticket #1019 ("solvent" not recognized after opening IHM) closed by pett
fixed: Fixed. Ignore Structures when finding atoms based on surface …
1:19 AM Ticket #1020 (OpenGL 3.3 not available) created by sandrine.legoff@…
[…]

Jan 31, 2018:

4:16 PM Ticket #1019 ("solvent" not recognized after opening IHM) created by Elaine Meng
If I open the nup IHM model (downloaded from …
4:11 PM 2018-01-25 edited by Tom Ferrin
(diff)
3:45 PM Ticket #799 (Core preferences GUI) closed by pett
fixed
12:51 PM Ticket #1018 (Allow 2dlabel to place images in scene) created by e.emmott@…
Begin forwarded message: From: "Emmott, Ed" Subject: …

Jan 30, 2018:

5:35 PM Ticket #1017 (OpenGL error restoring session) closed by Tom Goddard
fixed: Fixed. OpenGL error was caused by status line messages. When first …
1:04 PM Ticket #1017 (OpenGL error restoring session) created by donghyun.park@…
ChimeraX is opening a session, the session restore resizes the main …

Jan 26, 2018:

7:14 AM Ticket #1016 (NameError: name '_residue_ptr_to_inst' is not defined) closed by pett
fixed: I believe it's fixed now, though it's difficult for me to test from …
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