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Timeline
Jan 4, 2018:
- 3:32 PM Ticket #977 (can't load PDB's larger than a certain size?) created by
- […] adp_stateA_actin_chimera.pdb AM.pdb
- 2:27 PM Ticket #976 (viewdockx unhappy after closing previous viewdockx table) created by
- Maybe this is obscure... prioritize as desired: start ChimeraX, open …
- 2:14 PM Ticket #975 (Add "select" option to hbonds command) created by
- Add "select" option analogous to that in clashes/contacts (less …
- 2:00 PM Ticket #974 (problems with "reveal" option of hbonds, contacts, clashes) created by
- In "hbonds", this option should show the whole residue with an …
- 2:43 AM Ticket #961 (Toolshed not opening from ChimeraX in Linux (CentOS 7)) closed by
- nonchimerax: This was happening both in CentOS 7 and Fedora 24, but the problem is …
Jan 3, 2018:
- 2:07 PM Ticket #973 (Toolbar icons should not show keyboard shortcut status messages) closed by
- fixed: Fixed.
- 12:34 PM Ticket #973 (Toolbar icons should not show keyboard shortcut status messages) created by
- Make clicking a toolbar icon not report the equivalent keyboard …
- 12:16 PM Ticket #972 (open() opens text as ascii rather than unicode when Mac build is run ...) closed by
- nonchimerax: Take a look at the Python 3 open() documentation. …
- 9:22 AM Ticket #972 (open() opens text as ascii rather than unicode when Mac build is run ...) created by
- With a fresh installation of today's ChimeraX 0.5 on the Mac: If I …
Jan 2, 2018:
- 1:24 PM Ticket #971 (nucleotides error showing slabs for 5cd4) created by
- open 5cd4 hide protein nuc slab (nuc ladder works if you haven't …
- 5:05 AM Ticket #970 (GUI occasionally fails to respond to window resize) created by
- Probably another Linux-specific PyQt bug? On my Linux machine, …
Dec 28, 2017:
- 9:24 AM Ticket #969 (Color subcommands for zone, map, etc.) created by
- Tom G: Maybe the color command would be easier to grasp if zone and …
Dec 27, 2017:
- 2:37 PM Ticket #968 (nucleotides not saved in sessions) created by
- UCSF ChimeraX version: 0.5 (2017-12-26) Maybe this is known, but if I …
Dec 22, 2017:
- 12:00 AM Milestone 0.5 completed
- * ViewDockX * Nucleotides * BILD * New volume formats * Distance command
Dec 21, 2017:
- 2:44 PM 2017-12-21 created by
- 2:31 PM DeveloperMeetings edited by
- (diff)
- 9:06 AM Ticket #967 (RFE: ViewdockX select multiple compounds and change status en masse) created by
- Elaine: the main functionality I miss is some way to collectively …
Dec 19, 2017:
- 11:42 AM Ticket #966 ('make app-install' hangs when ToolShed website is down) created by
- […]
- 11:21 AM Ticket #965 (Jupyter lists all properties of an object twice) closed by
- nonchimerax: I see no double listing. a = [] a.<tab> lists the attributes only …
- 9:37 AM Ticket #965 (Jupyter lists all properties of an object twice) created by
- Probably just another PyQt bug? Lately, doing: object.<tab> for any …
Dec 18, 2017:
- 6:46 PM Ticket #964 (Mirror VR on desktop display) created by
- Would like to mirror the view from a virtual reality headset in the …
- 11:49 AM Ticket #946 (Enhance tool window management to allow starting out tabbed) closed by
- fixed: Well, there is now untested code that theoretically allows for this. …
- 11:19 AM Ticket #962 (Can't re-contour and re-zone Volume in same graphics update) closed by
- fixed: I renamed Volume._update_drawings() to Volume.update_drawings() making …
- 9:55 AM Ticket #963 (lots of DNA/RNA tethers with cartoon suppress false) created by
- I'm not sure this is a bug but the tethers may be excessive for …
Dec 15, 2017:
- 12:43 PM Ticket #952 (Crash closing atomic structure on Windows) closed by
- duplicate: dup of #953
- 12:42 PM Ticket #953 (Crash closing atomic structure on Windows) closed by
- can't reproduce: No longer reproducible; presumably fixed by same fix as #957
- 11:16 AM Ticket #960 (hbonds: TypeError: Group type mismatch) closed by
- fixed: "split" command wasn't preserving pseudobond group type
- 2:56 AM Ticket #962 (Can't re-contour and re-zone Volume in same graphics update) created by
- For example, my Mousemode method below acts on a Volume object (or …
- 2:07 AM Ticket #961 (Toolshed not opening from ChimeraX in Linux (CentOS 7)) created by
- I just get a blank screen. Opens fine if I copy and paste the URL to …
Dec 14, 2017:
- 5:44 PM Ticket #960 (hbonds: TypeError: Group type mismatch) created by
- open 1bna split atoms solvent hb #1 gives error 127 hydrogen bonds …
- 4:34 PM Ticket #959 (Unknown C++ exception deleting atoms) closed by
- fixed: Same problem/fix as #957
- 4:30 PM Ticket #957 (Crash deleting pseudobond with Mac OS XCode 9.2) closed by
- fixed: Pseudobond destructor was accessing deleted endpoint atoms
- 4:03 PM ChangeLog edited by
- (diff)
- 2:47 PM 2017-12-14 created by
- 2:43 PM Ticket #252 (Nucleotide display) closed by
- fixed: Done
- 2:32 PM Ticket #616 (Add support for distance measurements) closed by
- fixed: Atomic distances are done. Non-atomic are not.
- 2:07 PM DeveloperMeetings edited by
- (diff)
- 12:59 PM Ticket #910 ("rungs" hiding options seem to have problems) closed by
- not a bug: I think the current rungs hide behavior which hides the atoms is …
- 12:45 PM Ticket #959 (Unknown C++ exception deleting atoms) created by
- On Windows 10 with current daily build deleting atoms causes a C++ …
- 9:06 AM Ticket #958 (Toolshed offers to install Linux bundle on Mac) created by
- At the Toolshed the ISOLDE bundle is only available for Linux and …
Dec 13, 2017:
- 8:05 PM Ticket #955 (Index error showing one volume plane) closed by
- fixed: Fixed. When solid style drawing was off, its draw routine still …
- 6:00 PM Ticket #957 (Crash deleting pseudobond with Mac OS XCode 9.2) created by
- Opening IHM file nup84.ihm crashes ChimeraX when ChimeraX is started …
Dec 12, 2017:
- 4:23 PM Ticket #956 (OpenGL error switch from surface to volume style) closed by
- fixed: Fixed. Code created volume texture and then deleted it without making …
- 3:51 PM Ticket #954 (Session restore error resizing main window) closed by
- fixed: Fixed. Don't set window size if ChimeraX window is maximized. Tested …
- 3:07 PM Ticket #956 (OpenGL error switch from surface to volume style) created by
- Got OpenGL error switching volume viewer menu from surface style to …
- 2:59 PM Ticket #955 (Index error showing one volume plane) created by
- Choosing menu entry show one plane after right click on volume viewer …
- 2:42 PM Ticket #954 (Session restore error resizing main window) created by
- Seesion restore gives a warning that it cannot resize the main window …
- 2:31 PM Ticket #953 (Crash closing atomic structure on Windows) created by
- Opening p97_drug.cxs session and pressing Close button on Model Panel …
- 2:31 PM Ticket #952 (Crash closing atomic structure on Windows) created by
- Opening p97_drug.cxs session and pressing Close button on Model Panel …
Dec 11, 2017:
- 2:58 PM Ticket #530 (ChimeraX failed to load libEGL) closed by
- nonchimerax: My apologies, I see that no one was assigned to your ticket and it was …
- 1:30 PM Ticket #735 (Need access to Python from Javascript in HTML pages) closed by
- fixed: See tutorial GUI example
- 10:48 AM Ticket #951 (mlp not using transformed coordinates) closed by
- fixed: Fixed. The color surface by volume code was not handling the case …
- 10:29 AM Ticket #951 (mlp not using transformed coordinates) created by
- example open 1eys-opm.pdb (attached) open 1eys mm #2 to #1 mlp #2 …
Dec 7, 2017:
- 11:44 AM Ticket #948 (hbonds: AttributeError: 'list' object has no attribute 'element_numbers') closed by
- fixed
- 11:21 AM Ticket #950 (Color ligands distinctly in smart initial display) created by
- Would be nice if ligands showed in a different color than the …
- 6:10 AM Ticket #949 (Tool window dragging problematic on Linux) created by
- (In Linux - haven't confirmed for other OSes). This seems to be a new …
Dec 6, 2017:
- 6:48 PM Ticket #948 (hbonds: AttributeError: 'list' object has no attribute 'element_numbers') created by
- open 1BGQ 1BYQ 1YET 2BRC 2BRE 2CGF 2FWY 2FWZ 2H55 2IOP 2IOR 2IWS 2IWU …
- 2:00 PM Ticket #947 (Image save only includes lower left quadrant, Mac retina display) created by
- Saving images during movie recording sometimes only includes the lower …
Dec 5, 2017:
- 10:40 PM Ticket #942 (No balloons on assemblies) closed by
- fixed: Confirmed. The refactor wasn't combining the bounds of child drawings …
- 10:10 AM Ticket #944 (RFE: molc-style API for custom C++ objects) closed by
- fixed
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