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Timeline
Oct 13, 2016:
- 5:22 PM Ticket #448 (Info log message highlighted like warnings) closed by
- fixed
- 3:03 PM DeveloperMeetings edited by
- (diff)
- 3:03 PM 2016-10-13 created by
- 11:21 AM Ticket #449 (Volume planes on multiple data display is erratic) created by
- Looks like volume planes command to cycle through planes when applied …
- 9:46 AM Ticket #448 (Info log message highlighted like warnings) created by
- When opening a file the collating log colors both warnings and info …
Oct 11, 2016:
- 7:02 PM Ticket #447 (Transparency command on volumes undone when contour level changes) created by
- The transparency command on volume surface display changes the surface …
- 12:25 PM Ticket #446 (cartoon: changing nucleic style also changes coil) created by
- Width, thickness, cross-section should be separately settable for …
- 9:39 AM Ticket #445 (Traceback when executing a long select command) created by
- Crashed when issuing the following REST command: sel …
Oct 9, 2016:
- 10:04 PM Ticket #444 (Python shell scripts refer to wrong install location) closed by
- fixed: Python scripts are now removed from the application to avoid them …
Oct 7, 2016:
- 12:46 PM Ticket #444 (Python shell scripts refer to wrong install location) created by
- The Python shell script included in Linux ChimeraX in the bin …
Oct 6, 2016:
Oct 5, 2016:
- 4:33 PM Ticket #443 (mmaker error: KeyError: ('<', 'M')) closed by
- fixed: The domain-restricted sequence that was constructed wasn't having its …
- 3:58 PM Ticket #443 (mmaker error: KeyError: ('<', 'M')) created by
- open 3iko del ~/C open ScNup84_7-488_506-726_new.pdb mmaker #1 to …
- 1:53 PM Ticket #442 (Deleting atoms of 3jro causes crash) closed by
- fixed: Fixed. The translation of a min() func from Chimera 1 in its …
- 12:35 PM Ticket #442 (Deleting atoms of 3jro causes crash) created by
- open 3jro del /a:1100-2000 del :100-200 crashes in …
Oct 4, 2016:
- 11:25 AM Ticket #441 (cartoon helix tubes choke on 1zik) created by
- Although I can show tube helices for several other models without this …
- 10:49 AM Ticket #440 (Dual view windows to compare structures) created by
- Begin forwarded message: From: Markus Heller Subject: [Chimera-users] …
Sep 30, 2016:
- 2:16 PM Ticket #439 (Signing windows ChimeraX fails) created by
- Successful compile (128.672 sec). Resulting Setup program filename is: …
Sep 29, 2016:
- 3:20 PM 2016-09-29 edited by
- (diff)
- 3:20 PM 2016-09-29 edited by
- (diff)
- 3:16 PM DeveloperMeetings edited by
- (diff)
- 3:15 PM 2016-09-29 created by
Sep 28, 2016:
- 2:31 PM Ticket #438 (PDBFixer doesn't add correct atoms) created by
- PDBFixer on 5jqf incorrectly adds a fourth hydrogen H to the first …
- 1:24 PM Ticket #437 (OpenMM hangs and uses all system memory, tug atom mouse mode) created by
- Using the tug mouse mode on Mac OS 10.11 and 10.12 frequently at the …
Sep 26, 2016:
- 11:41 AM Ticket #434 ("ts refresh" gives traceback mentioning ihm) closed by
- fixed: This error actually comes from better error checking of the bundle API …
Sep 23, 2016:
- 4:46 PM Ticket #436 (Tool setup.py cannot register multiple extensions for file format) created by
- FASTA and several other sequence formats have no "standard" file …
Sep 22, 2016:
- 4:47 PM Ticket #435 (strand command-line selector broken) closed by
- fixed: Fixed. Conrad missed the 'strand' and 'coil' selectors when he …
- 4:40 PM Ticket #435 (strand command-line selector broken) created by
- trying to use atomspec "strand" gives error (e.g. "sel strand") …
- 4:32 PM 2016-09-22 edited by
- (diff)
- 4:30 PM DeveloperMeetings edited by
- (diff)
- 4:09 PM 2016-09-22 created by
Sep 20, 2016:
- 2:52 PM Ticket #434 ("ts refresh" gives traceback mentioning ihm) created by
- UCSF ChimeraX version: 0.1 (2016-09-16) toolshed refresh Traceback …
- 2:35 PM Ticket #432 (capping residue ACE considered ligand, not surfaced) closed by
- fixed: Capping groups now included in polymer chain.
- 10:23 AM Ticket #433 (consider PISA fetch for assemblies and/or interface statistics) created by
- Forming URLs to retrieve data from PDBePISA: …
Sep 19, 2016:
- 4:16 PM 2016-08-29 edited by
- (diff)
- 3:32 PM Ticket #432 (capping residue ACE considered ligand, not surfaced) created by
- Example is both chains in 1hzx. Probably the same issue with NME …
- 2:54 PM 2016-09-19 created by
- 1:56 PM DeveloperMeetings edited by
- (diff)
Sep 16, 2016:
- 12:48 PM Ticket #431 (Error opening PDB with blank chain id) closed by
- fixed
- 12:32 PM Ticket #431 (Error opening PDB with blank chain id) created by
- open input_nowater.pdb Summary of problems opening input_nowater.pdb: …
- 11:54 AM Ticket #425 (saving session changes ACE residue from chain A to chain B) closed by
- fixed: The multi-atom deletion code wasn't updating chains as residues got deleted
Sep 15, 2016:
- 5:33 PM Ticket #430 (buriedarea and sasa should exclude ions, solvent, ligands) created by
- Should the buriedarea and sasa (solvent accessible surface area) …
- 5:24 PM Ticket #429 (matchmaker doesn't recognize tRNA as Nucleic?) closed by
- fixed: Fixed. The wrapping for the C++ function that converts 3-character …
- 5:23 PM Ticket #428 (buriedarea "select" should clear previous selection) closed by
- fixed: Ok, I made the buriedarea command "select" option replace the selection.
- 4:07 PM 2016-09-15 created by
- 2:09 PM FAI edited by
- (diff)
- 2:07 PM DeveloperMeetings edited by
- (diff)
- 12:43 PM Ticket #429 (matchmaker doesn't recognize tRNA as Nucleic?) created by
- open 2tra open 4tra mm #1 to #2 matrix Nucleic ... gives error …
- 12:16 PM Ticket #428 (buriedarea "select" should clear previous selection) created by
- Using the "select" option of "buriedarea" with gradually increasing …
Sep 13, 2016:
- 12:26 AM Ticket #426 (Drag selection is selecting more than atoms in rectangle) closed by
- fixed: Fixed. Planar bounds of selection frustum were assuming perspective …
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