Timeline



Aug 10, 2015:

6:20 PM Ticket #128 (mmCIF reader crashes on 4ffh) closed by Greg Couch
fixed: Fixed. Was problem with sheet ranges where the end residue was before …
5:33 PM Ticket #129 (MODRES insufficient to determine polymers) created by Eric Pettersen
Some non-standard polymeric residues are not described in MODRES …
5:06 PM Ticket #127 (Opening 1jj2 pdb format is slow) closed by Eric Pettersen
fixed: When residue names were switched over to fixed strings, PDBio was no …
5:00 PM Ticket #126 (RNA residues have in_chain false) closed by Eric Pettersen
fixed
4:59 PM Ticket #128 (mmCIF reader crashes on 4ffh) created by Tom Goddard
open mmcif:4ffh produces the following crash. Process: …
3:15 PM Ticket #127 (Opening 1jj2 pdb format is slow) created by Tom Goddard
Opening 1jj2 in pdb format takes 6 seconds, while a 3 week old (July …
2:50 PM Ticket #126 (RNA residues have in_chain false) created by Tom Goddard
Most or all RNA residues have in_chain false. For example open 1h4s …

Aug 6, 2015:

5:42 PM Ticket #125 (mmCIF file reader should show at most one warning dialog) created by Tom Goddard
The PDB file reader collapses all warnings and presents them in one …
5:40 PM Ticket #124 (Preference so warnings don't show a dialog) created by Tom Goddard
Currently warnings that occur when opening a PDB or mmCIF file show a …
5:24 PM Ticket #123 (Crash in num_chains for 4v6w.cif) closed by Eric Pettersen
fixed: Slight mis-translation of constrained_match (off by 1 error)

Aug 5, 2015:

1:46 PM Ticket #123 (Crash in num_chains for 4v6w.cif) created by Tom Goddard
open mmcif:4v6w sym #1 assembly 1 Produces a crash (segmentation …

Aug 4, 2015:

5:05 PM Ticket #122 (Shortcut to select all text in Log) created by Tom Goddard
The normal Apple shortcut Command-A doesn't select all text in the …
5:03 PM Ticket #121 (String too long error opening mmCIF file) created by Tom Goddard
Opening the mmcif file …

Aug 3, 2015:

4:48 PM Ticket #120 (Dragging panel in produces ~wxWindowBase() error) created by Tom Goddard
Drag side view panel out. Then drag it back into Chimera on far right …

Jul 30, 2015:

3:39 PM 2015-7-30 edited by Conrad Huang
(diff)
12:08 PM DeveloperMeetings edited by Conrad Huang
(diff)
12:08 PM 2015-7-30 created by Conrad Huang

Jul 29, 2015:

10:47 AM Ticket #119 (Put build scripts in chimera2 git repository) created by Tom Goddard
Currently the scripts for building Chimera 2 on different platforms …

Jul 28, 2015:

5:19 PM Ticket #118 (Render images in nogui mode) created by Tom Goddard
Want to be able to render images in nogui mode on a server that has no …

Jul 27, 2015:

12:58 PM Ticket #117 (Linux daily builds gives wx errors on startup) created by Tom Goddard
Starting the current Linux daily build gives several errors of two …
12:53 PM Ticket #116 (Linux daily build gets 3.0 compatibility context instead of 3.3 core ...) created by Tom Goddard
Chimera 2 fails to start on an Ubuntu 15.04 system with Intel HD 6000 …
12:47 PM Ticket #115 (Linux daily build does not include libwebkitgtk-1.0) created by Tom Goddard
The Linux daily build does not start because shared library …
12:45 PM Ticket #114 (Linux daily build does not include libjpeg62) created by Tom Goddard
The Linux daily build requires libjpeg.so.62 for Chimera 2 to start …
12:41 PM Ticket #113 (Linux installer has .bin suffix but is actually a .tar.gz) created by Tom Goddard
The Linux daily build distribution has a .bin suffix …

Jul 23, 2015:

5:40 PM Ticket #111 (Command line parsing doesn't handle single quotes) closed by Greg Couch
fixed
5:36 PM Ticket #85 (Open mmcif is 2x slower than yesterday, 3j3q) closed by Greg Couch
fixed: Resolved that ss_ids will be different between PDB and mmCIF readers. …
3:37 PM DeveloperMeetings edited by Conrad Huang
(diff)
3:37 PM 2015-7-23 created by Conrad Huang
1:40 PM Ticket #107 (Update status line outside event loop) closed by Eric Pettersen
fixed: Fixed, though I couldn't really find anything to test it on. --Eric

Jul 22, 2015:

1:16 PM Ticket #112 (Graphics crash on Mac, large surfaces) created by Tom Goddard
Crashed after making solvent excluded surfaces on reovirus: open …

Jul 20, 2015:

10:23 AM Needed Command Functionality edited by Elaine Meng
(diff)
10:16 AM Needed Command Functionality edited by Elaine Meng
(diff)

Jul 17, 2015:

5:33 PM Ticket #111 (Command line parsing doesn't handle single quotes) created by Tom Goddard
Command line parsing allows quoting string arguments with double …
9:37 AM Ticket #110 (Error hiding ribbon of selected residue) closed by Conrad Huang
fixed: Fixed in 4057ebf

Jul 16, 2015:

7:09 PM Ticket #110 (Error hiding ribbon of selected residue) created by Tom Goddard
open pdb:1a0m style stick rib /a # select a ribbon residue by clicking …
4:29 PM Needed Command Functionality edited by Elaine Meng
(diff)
3:35 PM Needed Command Functionality edited by Elaine Meng
(diff)
3:15 PM DeveloperMeetings edited by Conrad Huang
(diff)
3:14 PM 2015-7-16 created by Conrad Huang
12:18 PM Needed Command Functionality edited by Elaine Meng
(diff)
12:08 PM Needed Command Functionality edited by Elaine Meng
(diff)
11:30 AM Needed Command Functionality edited by Elaine Meng
(diff)
11:01 AM Needed Command Functionality edited by Elaine Meng
(diff)

Jul 15, 2015:

11:27 AM Needed Command Functionality edited by Elaine Meng
(diff)
11:23 AM Needed Command Functionality edited by Elaine Meng
(diff)
11:20 AM Needed Command Functionality edited by Elaine Meng
(diff)

Jul 13, 2015:

6:12 PM EarlyReleaseRequirements edited by Greg Couch
(diff)
12:02 PM EarlyReleaseRequirements edited by Greg Couch
(diff)
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