Timeline



Aug 24, 2026: Yesterday

9:14 PM Ticket #20870 (ChimeraX bug report submission) created by payal.pratap@…
[…]
3:46 PM Ticket #20869 (Toolshed searching broken) closed by Greg Couch
limitation: Currently, the toolshed is reindexed once a day. Running the periodic …
2:54 PM Ticket #20868 (Crash in NSAccessibility routines in Qt 6.10.2) closed by Tom Goddard
limitation: Qt bug related to Mac accessibility features, reported many times. …
2:51 PM Ticket #20865 (glGetError: invalid operation) closed by Tom Goddard
limitation: Looks like they are using Parallels Virtual Platform to run Windows on …
1:25 PM Ticket #20869 (Toolshed searching broken) created by samuels.lobo@…
Toolshed searching is not working right now. Searching for …
11:13 AM Ticket #20862 (Minimization failure: KeyError: 'N') closed by Eric Pettersen
can't reproduce
11:10 AM Ticket #20868 (Crash in NSAccessibility routines in Qt 6.10.2) created by chimerax-bug-report@…
[…]
11:06 AM Ticket #20861 (Impossible QKeyEvent in drag and drop) closed by Eric Pettersen
can't reproduce
10:56 AM Ticket #20859 (Crash in QDockWidget::event) closed by Eric Pettersen
can't reproduce: Hi Yesenia, Thanks for reporting this problem. It is a bug in the Qt …
4:40 AM Ticket #20867 (ORCA output windows exactly overlapped and can be accidentally docked) created by benedek.stadler@…
[…]

Aug 23, 2026:

7:05 PM Ticket #20866 (QScore: 'scores' is None) created by chimerax-bug-report@…
[…]
9:47 AM Ticket #20865 (glGetError: invalid operation) created by chimerax-bug-report@…
[…]
1:27 AM Ticket #20864 (Install pyKVFinder: empty pip error message) created by strangekahat3000@…
[…]

Aug 22, 2026:

5:02 PM Ticket #20863 (Setting halfbond coloring of pseudobonds also changes normal bonds) closed by Tom Goddard
fixed: Fixed. The color command halfbond option was being applied to bonds …
4:49 PM Ticket #20863 (Setting halfbond coloring of pseudobonds also changes normal bonds) created by goddard@…
[…]

Aug 21, 2026:

9:56 AM Ticket #20862 (Minimization failure: KeyError: 'N') created by chimerax-bug-report@…
[…]

Aug 20, 2026:

11:04 PM Ticket #20861 (Impossible QKeyEvent in drag and drop) created by chimerax-bug-report@…
[…]
7:08 PM Ticket #20857 (AlphaFold PAE: 'ra' is None) closed by Tom Goddard
fixed: Fixed. Deleting some residues or atoms from predicted structure then …
6:48 PM Ticket #20858 ("alphafold search" produces no output) closed by Tom Goddard
fixed: Fixed. I added the start() call needed after the September 2023 …
5:39 PM Ticket #20860 (Detect incomplete Boltz installation running predictions) created by Tom Goddard
Connor Ferguson wrote on the ChimeraX mailing list about Boltz failing …
5:16 PM Ticket #20859 (Crash in QDockWidget::event) created by yesenia.acevedo@…
[…]
4:03 PM Ticket #20858 ("alphafold search" produces no output) created by Eric Pettersen
[…]
11:36 AM Ticket #20856 (KVFinder on old MacOS) closed by Eric Pettersen
nonchimerax

Aug 19, 2026:

12:52 PM Ticket #20857 (AlphaFold PAE: 'ra' is None) created by chimerax-bug-report@…
[…]
9:38 AM Ticket #20856 (KVFinder on old MacOS) created by chimerax-bug-report@…
[…]

Aug 18, 2026:

10:51 AM Ticket #20854 (Problem accepting license) closed by Eric Pettersen
not a bug: Hi Shiomara, You must have clicked the wrong button on the license …
9:49 AM Ticket #20855 (Removing custom dssp module doesn't re-enable default dssp) created by cborghese@…
[…]
9:08 AM Ticket #20852 (View triggers does not have 'graphics update') closed by Tom Goddard
can't reproduce: Looks like some large memory corruption. "graphics update" trigger …

Aug 17, 2026:

9:34 PM Ticket #20854 (Problem accepting license) created by shiomara.salva@…
[…] [[Image(...)]]
1:53 PM Ticket #20832 (NeedlemanWunch.matches_to_gapped_seqs() modifies arguments) closed by Eric Pettersen
fixed: Fix: …
1:26 PM Ticket #20853 (JSON failure: write() argument must be str, not list) closed by Eric Pettersen
duplicate: Duplicate of #20848

Aug 16, 2026:

5:56 PM Ticket #20821 (Remote display: Qt fatal error: Failed to initialize graphics backend ...) closed by Greg Couch
limitation: Probably a graphics driver bug.
5:55 PM Ticket #20822 (DLL load failed while importing: An Application Control policy has ...) closed by Greg Couch
can't reproduce: No response from submitter. Unclear how reproducible this is.

Aug 14, 2026:

3:16 AM Ticket #20853 (JSON failure: write() argument must be str, not list) created by chimerax-bug-report@…
[…]
3:10 AM Ticket #20852 (View triggers does not have 'graphics update') created by chimerax-bug-report@…
[…]

Aug 13, 2026:

4:33 PM ChangeLog edited by Eric Pettersen
(diff)
2:20 PM ChangeLog edited by Greg Couch
(diff)
12:27 PM Ticket #20850 (Crash on Mac waking from sleep) closed by Tom Goddard
duplicate: This ChimeraX crash is caused by a bug in the Qt window toolkit on …
12:25 PM Ticket #20851 (Crash on exit on Mac Qt 6.10.2) closed by Tom Goddard
can't reproduce: Probably a PyQt problem. Just reporting it so we know it still …
12:22 PM Ticket #20851 (Crash on exit on Mac Qt 6.10.2) created by goddard@…
[…] ChimeraX-2026-08-13-115146.ips
11:35 AM Ticket #20850 (Crash on Mac waking from sleep) created by i.vercellino@…
[…]
10:19 AM Ticket #20847 (Somehow a template residue atom's IDATM type is an empty string) closed by Eric Pettersen
can't reproduce: Can't reproduce even on a Windows box
8:16 AM Ticket #20849 (Wrong chain ID for non-chain residues) created by jianghai.zhu@…
[…]

Aug 12, 2026:

11:54 PM Ticket #20848 (JSON failure: write() argument must be str, not list) created by chimerax-bug-report@…
[…]
12:58 PM Ticket #20846 (Add GUI to associate structures with mutation score data) closed by Tom Goddard
fixed: Done. Sequence alignment shows mismatches in red and missing mutation …
12:26 PM Ticket #20847 (Somehow a template residue atom's IDATM type is an empty string) created by chimerax-bug-report@…
[…]
11:56 AM Ticket #20846 (Add GUI to associate structures with mutation score data) created by Tom Goddard
GUI can show a table of chains that can be associated and the sequence …
9:59 AM Ticket #20845 (Find Cavities: problem connecting to PyPi server) closed by Eric Pettersen
nonchimerax
9:49 AM Ticket #20843 (The impossible QKeyEvent being received as drag and drop) closed by Eric Pettersen
can't reproduce
9:44 AM Ticket #20845 (Find Cavities: problem connecting to PyPi server) created by chimerax-bug-report@…
[…]
5:33 AM Ticket #20844 (Bug reporter custom init failed: No space left on device) created by chimerax-bug-report@…
[…]
1:35 AM Ticket #6038 (ChimeraX Log panel broken on Fedora) closed by Greg Couch
limitation: For reference, the recommendation for unsupported (by the ChimeraX …
12:42 AM Ticket #5588 (Log blank) closed by Greg Couch
nonchimerax: For reference, this was probably caused by a missing or buggy graphics …
12:40 AM Ticket #5351 (HTML widgets blank) closed by Greg Couch
nonchimerax: For reference, this issue is fixed by having the appropriate graphics …

Aug 11, 2026:

5:28 PM Ticket #20843 (The impossible QKeyEvent being received as drag and drop) created by chimerax-bug-report@…
[…]
5:12 PM ChangeLog edited by Eric Pettersen
(diff)
11:25 AM 2026-8-20 created by Tom Goddard
11:24 AM DeveloperMeetings edited by Tom Goddard
(diff)
11:09 AM Ticket #20842 (Modeller and seqalign invalid escape sequences) created by Tom Goddard
The ChimeraX test suite is complaining in nightly builds about a …
8:50 AM Ticket #20841 (Cannot read command history) created by 2485238@…
[…]

Aug 10, 2026:

4:16 PM Dev2026-08-10 edited by Tom Goddard
(diff)
2:13 PM Dev2026-08-10 edited by Tom Goddard
(diff)
12:49 PM Ticket #20835 (Zone mouse mode using dead residue) closed by Tom Goddard
duplicate: Duplicate of #20758. Fixed in daily build.
12:43 PM Ticket #20839 (Crash in createPlatformIntegration) closed by Tom Goddard
can't reproduce: Crash trace shows Qt was trying to issue a message about this crash …
12:30 PM Ticket #20840 (Document restore scene window size option) closed by Tom Goddard
fixed: I added documentation to the Scene tools, scene command, and Window …
12:28 PM Ticket #20840 (Document restore scene window size option) created by Tom Goddard
Tim Springer mentioned scene window size not restored on the ChimeraX …
11:30 AM Ticket #20838 (Empty log contents) closed by Eric Pettersen
duplicate
11:29 AM Ticket #20837 (Empty log contents) closed by Eric Pettersen
duplicate: Hi Kexin, Thanks for reporting this problem. It has been fixed in …
11:22 AM Ticket #20836 (Crash in NSAccessibility routines in Qt 6.10.2 and ChimeraX 1.12) closed by Eric Pettersen
duplicate: Duplicate of #20773, though no suspicious log messages in this one.
11:15 AM Ticket #20834 (UnicodeDecodeError reading Model Panel settings) closed by Eric Pettersen
can't reproduce: The only thing in those settings is an integer and a boolean, so not …
11:11 AM Ticket #20833 (Crash while exiting in _enter_buffered_busy) closed by Eric Pettersen
duplicate: Duplicate of #20830
10:22 AM Ticket #20839 (Crash in createPlatformIntegration) created by chimerax-bug-report@…
[…]
6:12 AM Ticket #20838 (Empty log contents) created by liukx23@…
[…]
6:11 AM Ticket #20837 (Empty log contents) created by liukx23@…
[…]
3:32 AM Ticket #20836 (Crash in NSAccessibility routines in Qt 6.10.2 and ChimeraX 1.12) created by chimerax-bug-report@…
[…]
1:32 AM Ticket #20835 (Zone mouse mode using dead residue) created by chimerax-bug-report@…
[…]

Aug 9, 2026:

5:24 AM Ticket #20834 (UnicodeDecodeError reading Model Panel settings) created by chimerax-bug-report@…
[…]

Aug 8, 2026:

8:31 PM Ticket #20833 (Crash while exiting in _enter_buffered_busy) created by chimerax-bug-report@…
[…]

Aug 7, 2026:

5:00 PM Ticket #20832 (NeedlemanWunch.matches_to_gapped_seqs() modifies arguments) created by Tom Goddard
I tried using NeedlemanWunch.matches_to_gapped_seqs(match_list, ...) …
1:16 PM Ticket #20831 (Boltz: Failed to import Triton-based component: ...) closed by Tom Goddard
duplicate: Actually I see I updated the ChimeraX Boltz install to use Torch 12.8 …
12:20 PM Ticket #20830 (Crash while exiting in _enter_buffered_busy) closed by Tom Goddard
can't reproduce: Online sources suggest the _enter_buffered_busy fatal Python error …
12:11 PM Ticket #20828 (Crash in glBufferSubData using 21 GB on 16 GB Mac) closed by Tom Goddard
limitation: User had many maps open, had opened and closed many sessions and …
8:41 AM Ticket #20831 (Boltz: Failed to import Triton-based component: ...) created by swlovell@…
[…] Boltz_error
Note: See TracTimeline for information about the timeline view.