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Timeline
Sep 7, 2017:
- 6:43 PM ChangeLog edited by
- (diff)
- 3:36 PM Ticket #824 (New Edit menu interferes with text copy) created by
- I don't know if this is fixable, but Mac clover-c after highlighting …
- 2:39 PM 2017-09-07 created by
- 2:08 PM DeveloperMeetings edited by
- (diff)
- 11:14 AM Ticket #823 (changing number of dashes resets pseudobond color) closed by
- fixed: Fixed. Was a color updating bug -- color of bond didn't change but …
- 10:37 AM Ticket #823 (changing number of dashes resets pseudobond color) created by
- Example: open 1zik hb sidechain restrict both reveal t color yellow …
Sep 5, 2017:
- 1:34 PM Ticket #822 (Improved drawing of symmetry equivalents) created by
- At present in the Clipper plugin I handle crystallographic symmetry by …
- 12:34 PM Ticket #633 (Status messages cause havoc by running event loop) closed by
- fixed: Made status bar render with OpenGL with no Qt event processing.
- 12:34 PM msgpack-testing created by
- 12:19 PM DeveloperMeetings edited by
- (diff)
- 11:37 AM 2017-08-24 edited by
- (diff)
- 4:07 AM Ticket #821 (Have pseudobonds respect user hide flags) created by
- I understand why it makes sense to have pseudobonds remain visible …
Sep 1, 2017:
- 5:26 PM Ticket #820 ('Session' object has no attribute 'undo') closed by
- not a bug: I don't think my development install was completely up to date.
- 5:14 PM Ticket #820 ('Session' object has no attribute 'undo') created by
- Open 5uak and click the 'hide ribbon' toolbar icon. Traceback (most …
- 11:39 AM Ticket #819 (Add option to make surfaces have thickness) created by
- Begin forwarded message: From: Elaine Meng Subject: interesting …
Aug 31, 2017:
- 7:10 PM Ticket #818 (core dump deleting atoms) closed by
- fixed: Fixed, I think. Could not reproduce the crash (working on Mac), but …
- 5:17 PM Ticket #818 (core dump deleting atoms) created by
- On Linux and Windows, but not always on Macs, deleting a chain will …
- 4:16 PM Ticket #817 (traceback trying to use texture command) closed by
- fixed: Fixed. Problem was image was not found because command didn't handle …
- 3:43 PM Ticket #817 (traceback trying to use texture command) created by
- Maybe I misunderstood the usage information, but when I had mol surf …
- 1:04 PM Ticket #691 ("atomic" keyword to "open" for structures) closed by
- fixed
Aug 30, 2017:
- 12:59 PM Ticket #816 (Save dialog should add file suffix if none typed in) closed by
- fixed
- 10:58 AM ChangeLog edited by
- (diff)
- 10:53 AM ChangeLog edited by
- (diff)
- 8:58 AM Ticket #815 (chain-level zone atomspec not yet implemented) reopened by
- As Eric hinted at, this approach only includes polymers. My 1zik …
Aug 29, 2017:
- 4:44 PM Ticket #815 (chain-level zone atomspec not yet implemented) closed by
- fixed: Using Eric's two-level conversion for chains<->atoms, the chain zone …
- 4:33 PM Ticket #816 (Save dialog should add file suffix if none typed in) created by
- The File / Save... dialog currently does not add the file suffix if a …
- 4:30 PM Ticket #814 (Save .obj error) closed by
- fixed: Fixed. The File / Save... menu dialog was broken due to some recent …
- 3:49 PM Ticket #815 (chain-level zone atomspec not yet implemented) created by
- “/<“ doesn’t promote to chain… gives the same set of atoms as “@<“ …
Aug 28, 2017:
- 6:03 PM Ticket #814 (Save .obj error) created by
- […]
- 4:38 PM Ticket #801 (Unpredictable keyword completion) reopened by
- Sorry to reopen this when the problem is that we didn't specify the …
- 4:22 PM Ticket #812 (Adding pseudobonds causes graphics error) closed by
- fixed: Fixed. Pseudobond deletion was not being detected by graphics and …
- 3:08 PM Ticket #813 (prolines initially shown as "hooks" (open rings)) created by
- However, simply recoloring them shows the closed ring. Example: open …
Aug 26, 2017:
- 5:58 PM Ticket #776 (Right-click on Side View produces traceback) closed by
- fixed: Fixed a while ago.
- 5:46 PM Ticket #812 (Adding pseudobonds causes graphics error) created by
- Finding hydrogen bonds for 1eyg produces: 414 hydrogen bonds found …
- 5:43 PM Ticket #801 (Unpredictable keyword completion) closed by
- fixed: Done.
Aug 25, 2017:
- 3:42 PM Ticket #811 (Optimize cmap hdf5 format read speed for light microscopy data) created by
- The Chimera map format (*.cmap) HDF5 seems to be slow reading …
Aug 24, 2017:
- 3:04 PM 2017-08-24 edited by
- (diff)
- 3:00 PM 2017-08-24 edited by
- (diff)
- 2:51 PM 2017-08-24 created by
- 2:06 PM DeveloperMeetings edited by
- (diff)
- 2:05 PM Ticket #809 (mmCIF CA trace not quite correct) closed by
- fixed: Changed missing structure test for adjacent residues from gap or (not …
- 1:55 PM Ticket #810 (labels == slow) created by
- In the attached session I have roughly 10 labels shown, but the …
- 1:44 PM Ticket #809 (mmCIF CA trace not quite correct) created by
- For structures that change from full-atomic to chain-trace at some …
- 12:59 PM Ticket #808 (attempt to cartoon P-only nucleic in 1gsg gives indexError traceback) created by
- open 1gsg cartoon ...gives the following traceback (can be blamed on …
- 12:05 PM Ticket #807 (Atoms are wrong color after some are deleted) closed by
- fixed: Fixed. Recent graphics update code changes were not updating colors …
- 11:46 AM Ticket #807 (Atoms are wrong color after some are deleted) created by
- open 3fx2 hide ribbon ; show atoms delete solvent Atoms end up all …
Aug 22, 2017:
- 6:07 PM ChangeLog edited by
- (diff)
- 2:51 PM ChangeLog edited by
- (diff)
- 2:17 PM Ticket #806 (Chimera X QT bug?) created by
- […] [[Image(...)]]
Aug 21, 2017:
- 10:49 AM Ticket #805 (Help viewer no horizontal scroll if window made narrower than image) created by
- For example, start ChimeraX, menu: Help... User Guide, choose (under …
Aug 17, 2017:
- 6:39 PM Ticket #804 (Show residues fit error) closed by
- fixed: Fixed in tonight's ChimeraX builds. Thanks for reporting this problem …
- 5:15 PM ChangeLog edited by
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- 3:28 PM ChangeLog edited by
- (diff)
- 3:15 PM 2017-08-17 edited by
- (diff)
- 2:51 PM 2017-08-17 edited by
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- 2:49 PM 2017-08-17 edited by
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- 2:48 PM 2017-08-17 edited by
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- 2:48 PM 2017-08-17 edited by
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- 2:34 PM 2017-08-17 edited by
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- 2:29 PM 2017-08-17 edited by
- (diff)
- 2:14 PM 2017-08-17 created by
- 2:11 PM DeveloperMeetings edited by
- (diff)
- 1:34 PM Ticket #804 (Show residues fit error) created by
- […] Chimerax_error.png
Aug 16, 2017:
- 10:55 AM Ticket #803 (Multiprocessing "spawn" method does not work) created by
- (No idea who best to assign this to, so giving it to Tom for now). …
Aug 15, 2017:
- 12:12 PM ChangeLog edited by
- (diff)
- 12:11 PM ChangeLog edited by
- (diff)
- 10:28 AM Ticket #802 (changing font of residue labels gives traceback) closed by
- fixed: Fixed. Sorry for so many label bugs.
- 9:53 AM Ticket #802 (changing font of residue labels gives traceback) created by
- If I specify the font in the same command as creating the residue …
- 12:00 AM Milestone Alpha2 completed
Aug 14, 2017:
- 5:07 PM Ticket #801 (Unpredictable keyword completion) created by
- Currently, if a user doesn't type enough characters to uniquely …
- 3:27 PM ChangeLog edited by
- (diff)
- 1:32 PM ChangeLog edited by
- (diff)
- 10:52 AM Ticket #800 (Need undo manager) created by
- Instead of global undo for all actions, implement an undo manager that …
- 10:50 AM Ticket #799 (Core preferences GUI) created by
- Also, at least one example for a bundle preferences GUI
- 10:47 AM ChangeLog edited by
- (diff)
- 10:46 AM Ticket #798 (Switch default session format (v3) to msgpack) created by
- Support additional types (e.g., DateTime, list) using msgpack …
- 10:11 AM Ticket #797 ("label del" causes traceback) closed by
- fixed: Fixed. Not sure how I missed this in testing. I guess because I …
- 9:45 AM ChangeLog edited by
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- 9:45 AM ChangeLog edited by
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- 9:44 AM ChangeLog edited by
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- 9:38 AM Ticket #797 ("label del" causes traceback) created by
- It doesn't seem to matter which kind of 3D labels (atom, residue, …
Aug 13, 2017:
- 7:58 PM ChangeLog edited by
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- 7:57 PM ChangeLog edited by
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- 7:56 PM ChangeLog edited by
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Aug 11, 2017:
- 6:55 PM Ticket #796 (deleting residues with labels leaves labels shown and after that, no ...) closed by
- fixed: Fixed. Was missing code to check of labeled atom, residue or …
- 6:21 PM Ticket #795 (matched model's labels scaling up and down as I rotate the view) closed by
- fixed: Ha, ha, ha. Fixed.
- 6:13 PM Ticket #796 (deleting residues with labels leaves labels shown and after that, no ...) created by
- open 2gbp label ligand | solvent res (labels reorient if I rotate) del …
- 5:59 PM Ticket #795 (matched model's labels scaling up and down as I rotate the view) created by
- When I superimpose one model on the other, the matched model's labels …
- 1:45 PM ChangeLog edited by
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- 12:02 PM ChangeLog edited by
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- 11:08 AM ChangeLog created by
- 10:43 AM WikiStart edited by
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Aug 10, 2017:
- 5:34 PM 2017-08-10 edited by
- (diff)
- 5:15 PM Ticket #794 (wrong pseudobonds labeled, and "close" causes seg fault) closed by
- fixed: To correctly copy coordinate sets, I needed to override the assignment …
- 3:35 PM 2017-08-10 edited by
- (diff)
- 3:17 PM 2017-08-10 created by
- 2:44 PM BundleSessionSupport edited by
- (diff)
- 2:09 PM DeveloperMeetings edited by
- (diff)
- 11:12 AM Ticket #794 (wrong pseudobonds labeled, and "close" causes seg fault) created by
- If I run the following setup (also attached as cxc) open 4gbc sym #1 …
- 10:54 AM Ticket #793 (traceback due to typo in hbonds code) closed by
- fixed: My old ass eyes can't distinguish 'n' from 'm' anymore!
- 10:36 AM Ticket #793 (traceback due to typo in hbonds code) created by
- open 2ptt hbonds /a restrict /b Traceback (most recent call last): …
Aug 9, 2017:
- 1:15 PM Ticket #791 (Cannot change b-factors or occupancies) closed by
- fixed: Okay, after a code review finding no other instances of this usage …
- 9:57 AM Ticket #792 (RFE: add labels (3D) to color/transparency command targets) created by
- Consider adding a (3D) labels target to the color and transparency …
- 2:42 AM Ticket #791 (Cannot change b-factors or occupancies) created by
- […] I believe the culprit here is in CoordSet.cpp, in …
Aug 8, 2017:
- 6:06 PM Ticket #787 (label pseudobonds doesn't work if given pbond model number) closed by
- fixed: Fixed.
- 5:37 PM Ticket #774 (sym assembly model lacks metal coordination pbonds) closed by
- fixed
- 3:55 PM Ticket #790 (error saving session with crosslinks histogram) created by
- If I open the attached cxc file and then try to save session, I get …
- 3:30 PM Ticket #789 (Optimize atom radius lookup) created by
- Looking up atom radii values during graphics updates and when …
- 1:59 PM Ticket #788 (hbonds "selrestrict both" causes error) closed by
- fixed: Fixed as a side effect of findclash-like command syntax changes
- 12:20 PM Ticket #788 (hbonds "selrestrict both" causes error) created by
- This may be moot since you're getting rid of the selrestrict option, …
- 12:06 PM Ticket #787 (label pseudobonds doesn't work if given pbond model number) created by
- I'm pretty sure this used to work, but now the following doesn't show …
- 11:55 AM Ticket #786 (need method to reset view to default state) created by
- When closing a session, all of the tools are reset to the default …
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