Opened 5 years ago

Closed 5 years ago

Last modified 5 years ago

#4239 closed defect (can't reproduce)

Crash with trashed stack

Reported by: chimerax-bug-report@… Owned by: Eric Pettersen
Priority: normal Milestone:
Component: Core Version:
Keywords: Cc: Tom Goddard
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Darwin-20.3.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process:               ChimeraX [6033]
Path:                  /private/var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier:            edu.ucsf.cgl.ChimeraX
Version:               1.1.1 (1.1.1.0)
Code Type:             X86-64 (Native)
Parent Process:        ??? [1]
Responsible:           ChimeraX [6033]
User ID:               503

Date/Time:             2021-02-11 15:43:03.138 +0000
OS Version:            macOS 11.2.1 (20D74)
Report Version:        12
Bridge OS Version:     5.2 (18P4346)
Anonymous UUID:        C74D4D03-2B16-44EC-BABE-755DDA08C055


Time Awake Since Boot: 12000 seconds

System Integrity Protection: enabled

Crashed Thread:        0  CrBrowserMain

Exception Type:        EXC_BAD_ACCESS (SIGBUS)
Exception Codes:       KERN_MEMORY_ERROR at 0x000000011f0a1080
Exception Note:        EXC_CORPSE_NOTIFY

VM Regions Near 0x11f0a1080:
    VM_ALLOCATE                 11f062000-11f06a000    [   32K] r--/r-- SM=ALI  
--> mapped file                 11f06a000-11f1d2000    [ 1440K] r-x/rwx SM=COW  Object_id=fa04c3e5
    mapped file                 11f1d2000-11f1ea000    [   96K] rw-/rwx SM=COW  Object_id=fa5e6fe5

Thread 0 Crashed:: CrBrowserMain
0   ???                           	0x00007fff205ff462 0 + 140733736547426
1   ???                           	0x00007fff2050fba3 0 + 140733735566243
2   ???                           	0x00007fff20671d7d 0 + 140733737016701
3   ChimeraX                      	000000000000000000 0 + 0
4   ???                           	0x00007fff20724c3d 0 + 140733737749565
5   ???                           	0x00007fff20724436 0 + 140733737747510
6   ???                           	0x00007fff207236ce 0 + 140733737744078
7   ???                           	0x00007fff289ab630 0 + 140733874615856
8   ???                           	0x00007fff289ab42c 0 + 140733874615340
9   ???                           	0x00007fff289ab14f 0 + 140733874614607
10  ???                           	0x00007fff22f439b1 0 + 140733779818929
11  ???                           	0x00007fff22f42177 0 + 140733779812727
12  ???                           	0x00007fff22f3468a 0 + 140733779756682
13  ???                           	0x000000011f09fde3 0 + 4815715811
14  ???                           	0x00000001151f993f 0 + 4649359679
15  ???                           	0x00000001151fe932 0 + 4649380146
16  ???                           	0x00000001141c17d2 0 + 4632352722
17  ???                           	0x000000010747a382 0 + 4417102722
18  ???                           	0x00000001074798b9 0 + 4417099961
19  ???                           	0x000000010754eb60 0 + 4417973088
20  ???                           	0x000000010754b817 0 + 4417959959
21  ???                           	0x0000000107479d61 0 + 4417101153
22  ???                           	0x000000010754ebd4 0 + 4417973204
23  ???                           	0x000000010754b817 0 + 4417959959
24  ???                           	0x000000010754fa2c 0 + 4417976876
25  ???                           	0x0000000107479879 0 + 4417099897
26  ???                           	0x000000010754ebd4 0 + 4417973204
27  ???                           	0x000000010754b8ae 0 + 4417960110
28  ???                           	0x000000010754fa2c 0 + 4417976876
29  ???                           	0x0000000107544fb0 0 + 4417933232
30  ???                           	0x0000000107542547 0 + 4417922375
31  ???                           	0x000000010747a52d 0 + 4417103149
32  ???                           	0x00000001074798b9 0 + 4417099961
33  ???                           	0x000000010754eb60 0 + 4417973088
34  ???                           	0x000000010754b8ae 0 + 4417960110
35  ???                           	0x000000010754fa2c 0 + 4417976876
36  ???                           	0x0000000107479879 0 + 4417099897
37  ???                           	0x000000010754ebd4 0 + 4417973204
38  ???                           	0x000000010754b8ae 0 + 4417960110
39  ???                           	0x000000010754fa2c 0 + 4417976876
40  ???                           	0x0000000107479377 0 + 4417098615
41  ???                           	0x00000001075a9af3 0 + 4418345715
42  ???                           	0x00000001075a8bdc 0 + 4418341852
43  ???                           	0x00000001075a74c3 0 + 4418335939
44  ???                           	0x0000000107448dc8 0 + 4416900552
45  ???                           	0x00007fff20648621 0 + 140733736846881

Thread 1:: com.apple.NSEventThread
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x00007fff20725bf7 0 + 140733737753591
3   ???                           	0x00007fff207242ca 0 + 140733737747146
4   ???                           	0x00007fff207236ce 0 + 140733737744078
5   ???                           	0x00007fff230c97c6 0 + 140733781415878
6   ???                           	0x00007fff2062d950 0 + 140733736737104
7   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 2:: NetworkConfigWatcher
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c1422f 0 + 4727063087
4   ???                           	0x0000000119bc805d 0 + 4726751325
5   ???                           	0x0000000119bf1085 0 + 4726919301
6   ???                           	0x0000000119c439bc 0 + 4727257532
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 3:: DnsConfigService
0   ???                           	0x00007fff205fd7e2 0 + 140733736540130
1   ???                           	0x0000000119ed2cbd 0 + 4729941181
2   ???                           	0x0000000119c89cdc 0 + 4727545052
3   ???                           	0x0000000119bf1085 0 + 4726919301
4   ???                           	0x0000000119c439bc 0 + 4727257532
5   ???                           	0x0000000119c83717 0 + 4727518999
6   ???                           	0x00007fff2062d950 0 + 140733736737104
7   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 4:: TaskSchedulerServiceThread
0   ???                           	0x00007fff205fd7e2 0 + 140733736540130
1   ???                           	0x0000000119ed2cbd 0 + 4729941181
2   ???                           	0x0000000119c89cc4 0 + 4727545028
3   ???                           	0x0000000119bf1085 0 + 4726919301
4   ???                           	0x0000000119c32a74 0 + 4727188084
5   ???                           	0x0000000119c439bc 0 + 4727257532
6   ???                           	0x0000000119c83717 0 + 4727518999
7   ???                           	0x00007fff2062d950 0 + 140733736737104
8   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 5:: TaskSchedulerForegroundWorker
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c14421 0 + 4727063585
4   ???                           	0x0000000119c2bd28 0 + 4727160104
5   ???                           	0x0000000119c2c65b 0 + 4727162459
6   ???                           	0x0000000119c2c2c4 0 + 4727161540
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 6:: TaskSchedulerForegroundBlockingWorker
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c14421 0 + 4727063585
4   ???                           	0x0000000119c2bd28 0 + 4727160104
5   ???                           	0x0000000119c2c65b 0 + 4727162459
6   ???                           	0x0000000119c2c2c4 0 + 4727161540
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 7:: TaskSchedulerForegroundBlockingWorker
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c14421 0 + 4727063585
4   ???                           	0x0000000119c2bd28 0 + 4727160104
5   ???                           	0x0000000119c2c65b 0 + 4727162459
6   ???                           	0x0000000119c2c2c4 0 + 4727161540
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 8:: TaskSchedulerBackgroundWorker
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c14421 0 + 4727063585
4   ???                           	0x0000000119c2bd28 0 + 4727160104
5   ???                           	0x0000000119c2c65b 0 + 4727162459
6   ???                           	0x0000000119c2c234 0 + 4727161396
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 9:: TaskSchedulerBackgroundBlockingWorker
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c14421 0 + 4727063585
4   ???                           	0x0000000119c2bd28 0 + 4727160104
5   ???                           	0x0000000119c2c65b 0 + 4727162459
6   ???                           	0x0000000119c2c234 0 + 4727161396
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 10:: Chrome_IOThread
0   ???                           	0x00007fff205fd7e2 0 + 140733736540130
1   ???                           	0x0000000119ed2cbd 0 + 4729941181
2   ???                           	0x0000000119c89cc4 0 + 4727545028
3   ???                           	0x0000000119bf1085 0 + 4726919301
4   ???                           	0x000000011955ffe4 0 + 4720033764
5   ???                           	0x0000000119c439bc 0 + 4727257532
6   ???                           	0x0000000119c83717 0 + 4727518999
7   ???                           	0x00007fff2062d950 0 + 140733736737104
8   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 11:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c1422f 0 + 4727063087
4   ???                           	0x0000000119c2bd1a 0 + 4727160090
5   ???                           	0x0000000119c2c3bf 0 + 4727161791
6   ???                           	0x0000000119c2c264 0 + 4727161444
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 12:: CompositorTileWorker1/58115
0   ???                           	0x00007fff205fb8e2 0 + 140733736532194
1   ???                           	0x0000000119c81fa8 0 + 4727513000
2   ???                           	0x000000011ac084c8 0 + 4743791816
3   ???                           	0x0000000119c42694 0 + 4727252628
4   ???                           	0x0000000119c83717 0 + 4727518999
5   ???                           	0x00007fff2062d950 0 + 140733736737104
6   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 13:: AudioThread
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c1422f 0 + 4727063087
4   ???                           	0x0000000119bc805d 0 + 4726751325
5   ???                           	0x0000000119bf1085 0 + 4726919301
6   ???                           	0x0000000119c439bc 0 + 4727257532
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 14:: Chrome_InProcGpuThread
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119bc8052 0 + 4726751314
4   ???                           	0x0000000119bf1085 0 + 4726919301
5   ???                           	0x0000000119c439bc 0 + 4727257532
6   ???                           	0x0000000119c83717 0 + 4727518999
7   ???                           	0x00007fff2062d950 0 + 140733736737104
8   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 15:: Chrome_ChildIOThread
0   ???                           	0x00007fff205fd7e2 0 + 140733736540130
1   ???                           	0x0000000119ed2cbd 0 + 4729941181
2   ???                           	0x0000000119c89cdc 0 + 4727545052
3   ???                           	0x0000000119bf1085 0 + 4726919301
4   ???                           	0x0000000119c439bc 0 + 4727257532
5   ???                           	0x0000000119c83717 0 + 4727518999
6   ???                           	0x00007fff2062d950 0 + 140733736737104
7   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 16:: NetworkConfigWatcher
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c1422f 0 + 4727063087
4   ???                           	0x0000000119bc805d 0 + 4726751325
5   ???                           	0x0000000119bf1085 0 + 4726919301
6   ???                           	0x0000000119c439bc 0 + 4727257532
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 17:: TaskSchedulerSingleThreadForegroundBlocking1
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c1422f 0 + 4727063087
4   ???                           	0x0000000119c2bd1a 0 + 4727160090
5   ???                           	0x0000000119c2c65b 0 + 4727162459
6   ???                           	0x0000000119c2c324 0 + 4727161636
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 18:: NetworkConfigWatcher
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c1422f 0 + 4727063087
4   ???                           	0x0000000119bc805d 0 + 4726751325
5   ???                           	0x0000000119bf1085 0 + 4726919301
6   ???                           	0x0000000119c439bc 0 + 4727257532
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 19:
0   ???                           	0x00007fff20629458 0 + 140733736719448

Thread 20:
0   ???                           	0x00007fff20629458 0 + 140733736719448

Thread 21:
0   ???                           	0x00007fff205fb8e2 0 + 140733736532194
1   ???                           	0x000000010c217c3b 0 + 4498488379
2   ???                           	0x00007fff2062d950 0 + 140733736737104
3   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 22:
0   ???                           	0x00007fff205fb8e2 0 + 140733736532194
1   ???                           	0x000000010c217c3b 0 + 4498488379
2   ???                           	0x00007fff2062d950 0 + 140733736737104
3   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 23:
0   ???                           	0x00007fff205fb8e2 0 + 140733736532194
1   ???                           	0x000000010c217c3b 0 + 4498488379
2   ???                           	0x00007fff2062d950 0 + 140733736737104
3   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 24:: TaskSchedulerForegroundWorker
0   ???                           	0x00007fff205f8e7e 0 + 140733736521342
1   ???                           	0x00007fff205f91f0 0 + 140733736522224
2   ???                           	0x0000000119c1432d 0 + 4727063341
3   ???                           	0x0000000119c14421 0 + 4727063585
4   ???                           	0x0000000119c2bd28 0 + 4727160104
5   ???                           	0x0000000119c2c3bf 0 + 4727161791
6   ???                           	0x0000000119c2c2c4 0 + 4727161540
7   ???                           	0x0000000119c83717 0 + 4727518999
8   ???                           	0x00007fff2062d950 0 + 140733736737104
9   ???                           	0x00007fff2062947b 0 + 140733736719483

Thread 0 crashed with X86 Thread State (64-bit):
  rax: 0x0000000000000000  rbx: 0x000000010bea0e00  rcx: 0x00007fe04b777418  rdx: 0x0000000000000000
  rdi: 0x0000000000000307  rsi: 0x000000000000000a  rbp: 0x00007fe04b777440  rsp: 0x00007fe04b777418
   r8: 0x00007fe04b777f48   r9: 0x4f78dbe73b5c7614  r10: 0x000000010bea0e00  r11: 0x0000000000000246
  r12: 0x0000000000000307  r13: 0x0000600000196300  r14: 0x000000000000000a  r15: 0x0000000000000016
  rip: 0x00007fff205ff462  rfl: 0x0000000000000246  cr2: 0x00000001076527c8
  
Logical CPU:     0
Error Code:      0x02000148
Trap Number:     133

Thread 0 instruction stream not available.

Thread 0 last branch register state not available.


Binary Images:
                 0 - 0xffffffffffffffff +ChimeraX (???) /private/var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
       0x10bdc9000 -        0x10be64fff  dyld (832.7.3)  /usr/lib/dyld

External Modification Summary:
  Calls made by other processes targeting this process:
    task_for_pid: 5
    thread_create: 0
    thread_set_state: 0
  Calls made by this process:
    task_for_pid: 0
    thread_create: 0
    thread_set_state: 0
  Calls made by all processes on this machine:
    task_for_pid: 86345
    thread_create: 0
    thread_set_state: 0

VM Region Summary:
ReadOnly portion of Libraries: Total=848K resident=0K(0%) swapped_out_or_unallocated=848K(100%)
Writable regions: Total=1.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.0G(100%)
 
                                VIRTUAL   REGION 
REGION TYPE                        SIZE    COUNT (non-coalesced) 
===========                     =======  ======= 
Accelerate framework               384K        3 
Activity Tracing                   256K        1 
CG backing stores                 4320K       12 
CG image                           244K       13 
CoreAnimation                      164K       19 
CoreGraphics                        16K        3 
CoreUI image data                 4672K       35 
Foundation                          16K        1 
Kernel Alloc Once                 1452K        6 
MALLOC                           299.5M      281 
MALLOC guard page                   32K        8 
MALLOC_LARGE (reserved)            384K        1         reserved VM address space (unallocated)
MALLOC_NANO (reserved)           384.0M        1         reserved VM address space (unallocated)
OpenGL GLSL                        512K        6 
STACK GUARD                         96K       24 
Stack                            155.2M       25 
Stack Guard                       56.0M        1 
VM_ALLOCATE                      150.5M      281 
VM_ALLOCATE (reserved)            32.0M        1         reserved VM address space (unallocated)
__DATA                             224K        2 
__DATA_CONST                        32K        1 
__LINKEDIT                         240K        2 
__TEXT                             624K        1 
dylib                             1684K       24 
dylib (reserved)                    64K        5         reserved VM address space (unallocated)
mapped file                      360.6M      435 
shared memory                       48K        6 
===========                     =======  ======= 
TOTAL                              1.4G     1198 
TOTAL, minus reserved VM space     1.0G     1198 



Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 INTEL-16.1.11
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine
OpenGL vendor: Intel Inc.Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: MacBookPro16,2
      Processor Name: Quad-Core Intel Core i7
      Processor Speed: 2.3 GHz
      Number of Processors: 1
      Total Number of Cores: 4
      L2 Cache (per Core): 512 KB
      L3 Cache: 8 MB
      Hyper-Threading Technology: Enabled
      Memory: 16 GB
      System Firmware Version: 1554.80.3.0.0 (iBridge: 18.16.14346.0.0,0)

Software:

    System Software Overview:

      System Version: macOS 11.2.1 (20D74)
      Kernel Version: Darwin 20.3.0
      Time since boot: 3:27

Graphics/Displays:

    Intel Iris Plus Graphics:

      Chipset Model: Intel Iris Plus Graphics
      Type: GPU
      Bus: Built-In
      VRAM (Dynamic, Max): 1536 MB
      Vendor: Intel
      Device ID: 0x8a53
      Revision ID: 0x0007
      Metal Family: Supported, Metal GPUFamily macOS 2
      Displays:
        Color LCD:
          Display Type: Built-In Retina LCD
          Resolution: 2560 x 1600 Retina
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal
        DELL U2312HM:
          Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
          UI Looks like: 1920 x 1080 @ 60.00Hz
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Display Serial Number: KF87Y2BKCC4L
          Mirror: Off
          Online: Yes
          Rotation: Supported
          Automatically Adjust Brightness: Yes
          Connection Type: Thunderbolt/DisplayPort

PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    appnope: 0.1.0
    Babel: 2.8.0
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2020.6.20
    chardet: 3.0.4
    ChimeraX-AddH: 2.1.3
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.1
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.6.1
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 1.0.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.0
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.0
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.0
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-CommandLine: 1.1.3
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.1.1
    ChimeraX-CoreFormats: 1.0
    ChimeraX-coulombic: 1.0.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-DataFormats: 1.0
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.0
    ChimeraX-Hbonds: 2.0
    ChimeraX-Help: 1.0
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.0
    ChimeraX-ImageFormats: 1.0
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0
    ChimeraX-Label: 1.0
    ChimeraX-ListInfo: 1.0
    ChimeraX-Log: 1.1.1
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Map: 1.0.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.0
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 1.1
    ChimeraX-MDcrds: 2.0
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.0
    ChimeraX-mmCIF: 2.2
    ChimeraX-MMTF: 2.0
    ChimeraX-Modeller: 1.0
    ChimeraX-ModelPanel: 1.0
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.0
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0
    ChimeraX-OpenCommand: 1.2.1
    ChimeraX-PDB: 2.1
    ChimeraX-PDBBio: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0
    ChimeraX-PubChem: 2.0
    ChimeraX-Read-Pbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.0
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.2
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SeqView: 2.2
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.0
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.0
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.0.4
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.0
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.0
    ChimeraX-ToolshedUtils: 1.0
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.2.3
    ChimeraX-uniprot: 2.0
    ChimeraX-ViewDockX: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.3
    comtypes: 1.1.7
    cxservices: 1.0
    cycler: 0.10.0
    Cython: 0.29.20
    decorator: 4.4.2
    distlib: 0.3.1
    docutils: 0.16
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 2.10.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.16
    imagecodecs: 2020.5.30
    imagecodecs-lite: 2020.1.31
    imagesize: 1.2.0
    ipykernel: 5.3.0
    ipython: 7.15.0
    ipython-genutils: 0.2.0
    jedi: 0.17.2
    Jinja2: 2.11.2
    jupyter-client: 6.1.3
    jupyter-core: 4.6.3
    kiwisolver: 1.2.0
    line-profiler: 2.1.2
    lxml: 4.5.1
    MarkupSafe: 1.1.1
    matplotlib: 3.2.1
    msgpack: 1.0.0
    netifaces: 0.10.9
    networkx: 2.4
    numexpr: 2.7.1
    numpy: 1.18.5
    numpydoc: 1.0.0
    openvr: 1.12.501
    packaging: 20.4
    parso: 0.7.1
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 7.1.2
    pip: 20.2.2
    pkginfo: 1.5.0.1
    prompt-toolkit: 3.0.7
    psutil: 5.7.0
    ptyprocess: 0.6.0
    pycollada: 0.7.1
    pydicom: 2.0.0
    Pygments: 2.6.1
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.12.3
    PyQt5-sip: 4.19.19
    PyQtWebEngine-commercial: 5.12.1
    python-dateutil: 2.8.1
    pytz: 2020.1
    pyzmq: 19.0.2
    qtconsole: 4.7.4
    QtPy: 1.9.0
    RandomWords: 0.3.0
    requests: 2.24.0
    scipy: 1.4.1
    setuptools: 49.4.0
    sfftk-rw: 0.6.6.dev0
    six: 1.15.0
    snowballstemmer: 2.0.0
    sortedcontainers: 2.2.2
    Sphinx: 3.1.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 1.0.3
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.4
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2020.6.3
    tinyarray: 1.2.2
    tornado: 6.0.4
    traitlets: 5.0.4
    urllib3: 1.25.10
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.34.2

Change History (4)

comment:1 by Eric Pettersen, 5 years ago

Cc: Tom Goddard added
Component: UnassignedCore
Owner: set to Eric Pettersen
Platform: all
Project: ChimeraX
Status: newaccepted
Summary: ChimeraX bug report submissionCrash with trashed stack

comment:2 by Eric Pettersen, 5 years ago

Resolution: can't reproduce
Status: acceptedclosed

comment:3 by Tom Goddard, 5 years ago

latest macOS 11.2.1

comment:4 by Eric Pettersen, 5 years ago

...and dual display

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