Opened 90 minutes ago
#19966 new defect
ChimeraX bug report submission
| Reported by: | Owned by: | ||
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Unassigned | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | ||
| Project: |
Description
The following bug report has been submitted:
Platform: macOS-15.7.4-arm64-arm-64bit
ChimeraX Version: 1.11.1 (2026-01-23 05:51:34 UTC)
Description
I was trying to use a 3D Connexion SpaceMouse (Model 3DX-700 115) with ChimeraX 1.11.1, but it seems there is a missing library and I could not start device snav true. Logs are attached.
Log:
UCSF ChimeraX version: 1.11.1 (2026-01-23)
© 2016-2025 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> device snav
> device snav true
Could not start space navigator.
dlopen(/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/spacenavigator/_spacenavigator.cpython-311-darwin.so,
0x0002): Library not loaded:
/Library/Frameworks/3DconnexionClient.framework/Versions/A/3DconnexionClient
Referenced from: <13EAB7C7-A269-3B77-8B62-2910A21842C7>
/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/spacenavigator/_spacenavigator.cpython-311-darwin.so
Reason: tried:
'/Library/Frameworks/3DconnexionClient.framework/Versions/A/3DconnexionClient'
(no such file),
'/System/Volumes/Preboot/Cryptexes/OS/Library/Frameworks/3DconnexionClient.framework/Versions/A/3DconnexionClient'
(no such file),
'/Library/Frameworks/3DconnexionClient.framework/Versions/A/3DconnexionClient'
(no such file)
> open 8QOI format mmcif fromDatabase pdb
8qoi title:
Structure of the human 80S ribosome at 1.9 A resolution - the molecular role
of chemical modifications and ions in RNA [more info...]
Chain information for 8qoi #1
---
Chain | Description | UniProt
L5 | 28S rRNA (3773-MER) |
L7 | 5S rRNA (120-MER) |
L8 | 5.8S rRNA (156-MER) |
LA | 60S ribosomal protein L8 | RL8_HUMAN 1-257
LB | Large ribosomal subunit protein uL3 | RL3_HUMAN 2-403
LC | Large ribosomal subunit protein uL4 | RL4_HUMAN 1-368
LD | Large ribosomal subunit protein uL18 | RL5_HUMAN 2-294
LE | Large ribosomal subunit protein eL6 | RL6_HUMAN 42-288
LF | Large ribosomal subunit protein uL30 | RL7_HUMAN 1-248
LG | 60S ribosomal protein L7a | RL7A_HUMAN 1-266
LH | 60S ribosomal protein L9 | RL9_HUMAN 1-192
LI | 60S ribosomal protein L10-like | RL10L_HUMAN 1-214
LJ | 60S ribosomal protein L11 | RL11_HUMAN 1-178
LL | 60S ribosomal protein L13 | RL13_HUMAN 1-211
LM | 60S ribosomal protein L14 | RL14_HUMAN 1-215
LN | 60S ribosomal protein L15 | RL15_HUMAN 1-204
LO | 60S ribosomal protein L13a | RL13A_HUMAN 1-203
LP | 60S ribosomal protein L17 | RL17_HUMAN 1-184
LQ | 60S ribosomal protein L18 | RL18_HUMAN 1-188
LR | 60S ribosomal protein L19 | RL19_HUMAN 1-196
LS | 60S ribosomal protein L18a | RL18A_HUMAN 1-176
LT | 60S ribosomal protein L21 | RL21_HUMAN 1-160
LU | 60S ribosomal protein L22 | RL22_HUMAN 1-128
LV | 60S ribosomal protein L23 | RL23_HUMAN 1-140
LW | 60S ribosomal protein L24 | RL24_HUMAN 1-157
LX | 60S ribosomal protein L23a | RL23A_HUMAN 1-156
LY | 60S ribosomal protein L26 | RL26_HUMAN 1-145
LZ | 60S ribosomal protein L27 | RL27_HUMAN 1-136
La | Large ribosomal subunit protein uL15 | RL27A_HUMAN 1-148
Lb | 60S ribosomal protein L29 | RL29_HUMAN 1-159
Lc | 60S ribosomal protein L30 | RL30_HUMAN 1-115
Ld | 60S ribosomal protein L31 | RL31_HUMAN 1-125
Le | 60S ribosomal protein L32 | RL32_HUMAN 1-135
Lf | 60S ribosomal protein L35a | RL35A_HUMAN 1-110
Lg | 60S ribosomal protein L34 | RL34_HUMAN 1-117
Lh | 60S ribosomal protein L35 | RL35_HUMAN 1-123
Li | 60S ribosomal protein L36 | RL36_HUMAN 1-105
Lj | 60S ribosomal protein L37 | RL37_HUMAN 1-97
Lk | 60S ribosomal protein L38 | RL38_HUMAN 1-70
Ll | 60S ribosomal protein L39 | RL39_HUMAN 1-51
Lm | Ubiquitin-60S ribosomal protein L40 | RL40_HUMAN 1-128
Ln | 60S ribosomal protein L41 | RL41_HUMAN 1-25
Lo | 60S ribosomal protein L36a | RL36A_HUMAN 1-106
Lp | 60S ribosomal protein L37a | RL37A_HUMAN 1-92
Lr | 60S ribosomal protein L28 | RL28_HUMAN 1-137
S2 | 18S rRNA (1740-MER) |
SA | 40S ribosomal protein SA | RSSA_HUMAN 1-295
SB | 40S ribosomal protein S3a | RS3A_HUMAN 1-264
SC | 40S ribosomal protein S2 | RS2_HUMAN 1-293
SD | 40S ribosomal protein S3 | RS3_HUMAN 1-243
SE | 40S ribosomal protein S4, X isoform | RS4X_HUMAN 1-263
SF | 40S ribosomal protein S5 | RS5_HUMAN 1-204
SG | 40S ribosomal protein S6 | RS6_HUMAN 1-249
SH | 40S ribosomal protein S7 | RS7_HUMAN 1-194
SI | 40S ribosomal protein S8 | RS8_HUMAN 1-208
SJ | 40S ribosomal protein S9 | RS9_HUMAN 1-194
SK | 40S ribosomal protein S10 | RS10_HUMAN 1-165
SL | 40S ribosomal protein S11 | RS11_HUMAN 1-158
SM | 40S ribosomal protein S12 | RS12_HUMAN 1-132
SN | 40S ribosomal protein S13 | RS13_HUMAN 1-151
SO | 40S ribosomal protein S14 | RS14_HUMAN 1-151
SP | 40S ribosomal protein S15 | RS15_HUMAN 1-145
SQ | 40S ribosomal protein S16 | RS16_HUMAN 1-146
SR | 40S ribosomal protein S17 | RS17_HUMAN 1-135
SS | 40S ribosomal protein S18 | RS18_HUMAN 1-152
ST | Small ribosomal subunit protein eS19 | RS19_HUMAN 1-145
SU | 40S ribosomal protein S20 | RS20_HUMAN 1-119
SV | 40S ribosomal protein S21 | RS21_HUMAN 1-83
SW | 40S ribosomal protein S15a | RS15A_HUMAN 1-130
SX | 40S ribosomal protein S23 | RS23_HUMAN 1-143
SY | 40S ribosomal protein S24 | RS24_HUMAN 1-133
SZ | 40S ribosomal protein S25 | RS25_HUMAN 1-125
Sa | 40S ribosomal protein S26 | RS26_HUMAN 1-115
Sb | 40S ribosomal protein S27 | RS27_HUMAN 1-84
Sc | 40S ribosomal protein S28 | RS28_HUMAN 1-69
Sd | 40S ribosomal protein S29 | RS29_HUMAN 1-56
Se | Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein | RS30_HUMAN -73-59
Sf | Ubiquitin-40S ribosomal protein S27a | RS27A_HUMAN 1-156
Sg | Receptor of activated protein C kinase 1 | RACK1_HUMAN 1-317
Non-standard residues in 8qoi #1
---
B8N —
(2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic
acid
K — potassium ion
M7G — 7N-methyl-8-hydroguanosine-5'-diphosphate
MG — magnesium ion
SPD — spermidine (N-(2-amino-propyl)-1,4-diaminobutane; Pa(34))
UY1 — 2'-O-methylpseudouridine-5'-monophosphate
ZN — zinc ion
56 atoms have alternate locations. Control/examine alternate locations with
Altloc Explorer [start tool...] or the altlocs command.
7 atoms have anisotropic B-factors. Depict anisotropic information with
Thermal Ellipsoids [start tool...] or the aniso command.
OpenGL version: 4.1 Metal - 89.4
OpenGL renderer: Apple M2 Max
OpenGL vendor: Apple
Python: 3.11.9
Locale: en_US.UTF-8
Qt version: PyQt6 6.9.1, Qt 6.9.0
Qt runtime version: 6.9.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: Mac14,5
Model Number: MPHK3LL/A
Chip: Apple M2 Max
Total Number of Cores: 12 (8 performance and 4 efficiency)
Memory: 32 GB
System Firmware Version: 13822.81.10
OS Loader Version: 11881.140.96
Software:
System Software Overview:
System Version: macOS 15.7.4 (24G517)
Kernel Version: Darwin 24.6.0
Time since boot: 6 days, 10 hours, 40 minutes
Graphics/Displays:
Apple M2 Max:
Chipset Model: Apple M2 Max
Type: GPU
Bus: Built-In
Total Number of Cores: 30
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
aiobotocore: 3.2.0
aiohappyeyeballs: 2.6.1
aiohttp: 3.13.1
aioitertools: 0.13.0
aiosignal: 1.4.0
alabaster: 1.0.0
annotated-types: 0.7.0
anyio: 4.12.1
appdirs: 1.4.4
appnope: 0.1.4
asciitree: 0.3.3
asttokens: 3.0.1
asyncssh: 2.22.0
attrs: 25.4.0
babel: 2.17.0
backoff: 2.2.1
beautifulsoup4: 4.13.5
blockdiag: 3.0.0
blosc2: 3.12.2
boto3: 1.42.55
botocore: 1.42.55
build: 1.3.0
certifi: 2025.7.14
cffi: 2.0.0
cftime: 1.6.5
charset-normalizer: 3.4.4
ChimeraX-AddCharge: 1.5.20
ChimeraX-AddH: 2.2.8
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.6.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 3.1.1
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Animations: 1.0
ChimeraX-Aniso: 1.3.2
ChimeraX-Arrays: 1.1
ChimeraX-ArtiaX: 0.6.0
ChimeraX-Atomic: 1.61.4
ChimeraX-AtomicLibrary: 14.2.1
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.3
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-Boltz: 1.1
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.2
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.6.0
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.5
ChimeraX-ChemGroup: 2.0.2
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.8
ChimeraX-CommandLine: 1.3.0
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-copick: 1.6.0
ChimeraX-Core: 1.11.1
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.5
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.4
ChimeraX-Dicom: 1.2.7
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.4
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5.3
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.4
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.7.3
ChimeraX-Label: 1.2
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.2
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.2.2
ChimeraX-MCopy: 1.0
ChimeraX-MCPServer: 0.1.0
ChimeraX-MDcrds: 2.17.2
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-Minimize: 1.3.2
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.16
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.22
ChimeraX-ModelPanel: 1.6
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0.1
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OME-Zarr: 0.5.5
ChimeraX-OpenCommand: 1.15.2
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.12
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.5
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.4
ChimeraX-ProfileGrids: 1.4.2
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.5
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.3
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.2
ChimeraX-Scenes: 0.3.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.3
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.10
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.17.3
ChimeraX-Shape: 1.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.19.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.49.1
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDock: 1.5.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.5
ChimeraX-Zone: 1.0.1
click: 8.3.1
cloudpickle: 3.1.2
colorama: 0.4.6
comm: 0.2.3
contourpy: 1.3.3
copick: 1.20.0
copick-shared-ui: 0.3.0
coverage: 7.13.1
cryoet_data_portal: 4.6.1
cryptography: 46.0.5
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.1.4
dask: 2026.1.2
debugpy: 1.8.19
decorator: 5.2.1
deepmerge: 2.0
Deprecated: 1.3.1
distinctipy: 1.3.4
distributed: 2026.1.2
docutils: 0.21.2
dynamotable: 0.2.4
emfile: 0.3.0
executing: 2.2.1
fasteners: 0.20
filelock: 3.19.1
fonttools: 4.61.1
frozenlist: 1.8.0
fsspec: 2026.2.0
funcparserlib: 2.0.0a0
geomdl: 5.4.0
glfw: 2.10.0
gql: 3.5.3
grako: 3.16.5
graphql-core: 3.2.6
h11: 0.16.0
h5py: 3.15.1
hatchling: 1.29.0
html2text: 2025.4.15
httpcore: 1.0.9
httpx: 0.28.1
httpx-sse: 0.4.3
idna: 3.11
ihm: 2.2
imagecodecs: 2024.6.1
ImageIO: 2.37.2
imagesize: 1.4.1
importlib_metadata: 8.7.1
iniconfig: 2.3.0
ipykernel: 6.30.1
ipython: 9.5.0
ipython_pygments_lexers: 1.1.1
ipywidgets: 8.1.8
jedi: 0.19.2
Jinja2: 3.1.6
jmespath: 1.1.0
jsonschema: 4.26.0
jsonschema-specifications: 2025.9.1
jupyter_client: 8.6.3
jupyter_core: 5.9.1
jupyterlab_widgets: 3.0.16
kiwisolver: 1.4.9
lazy_loader: 0.4
line_profiler: 5.0.0
linkify-it-py: 2.0.3
locket: 1.0.0
lxml: 6.0.2
lz4: 4.3.2
Markdown: 3.8.2
markdown-it-py: 4.0.0
MarkupSafe: 3.0.3
matplotlib: 3.10.7
matplotlib-inline: 0.2.1
mcp: 1.18.0
mdit-py-plugins: 0.5.0
mdurl: 0.1.2
mrcfile: 1.5.4
msgpack: 1.1.1
multidict: 6.7.0
ndindex: 1.10.1
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numcodecs: 0.15.1
numexpr: 2.14.1
numpy: 2.2.6
numpy: 1.26.4
ome-zarr: 0.10.3
OpenMM: 8.2.0
openvr: 1.26.701
packaging: 25.0
pandas: 2.3.3
ParmEd: 4.2.2
parso: 0.8.5
partd: 1.4.2
pathspec: 1.0.4
pep517: 0.13.1
pexpect: 4.9.0
pickleshare: 0.7.5
pillow: 11.3.0
pip: 25.2
pkginfo: 1.12.1.2
platformdirs: 4.5.1
pluggy: 1.6.0
prompt_toolkit: 3.0.52
propcache: 0.4.1
psutil: 7.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pyarrow: 23.0.1
pybind11: 3.0.1
pycollada: 0.8
pycparser: 3.0
pydantic: 2.12.5
pydantic-settings: 2.12.0
pydantic_core: 2.41.5
pydicom: 2.4.4
Pygments: 2.19.2
Pygments: 2.18.0
pynmrstar: 3.3.6
pynrrd: 1.0.0
PyOpenGL: 3.1.10
PyOpenGL-accelerate: 3.1.10
pyopenxr: 1.1.4501
pyparsing: 3.3.2
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.9.1
PyQt6-Qt6: 6.9.2
PyQt6-WebEngine-commercial: 6.9.0
PyQt6-WebEngine-Qt6: 6.9.2
PyQt6_sip: 13.10.2
pyspnego: 0.12.0
pytest: 9.0.2
pytest-cov: 7.0.0
python-dateutil: 2.9.0.post0
python-dotenv: 1.2.1
python-multipart: 0.0.21
pytz: 2025.2
PyYAML: 6.0.3
pyzmq: 27.1.0
qtconsole: 5.7.0
QtPy: 2.4.3
qtshim: 1.2
RandomWords: 0.4.0
referencing: 0.37.0
requests: 2.32.5
requests-toolbelt: 1.0.0
rich: 14.3.3
roman-numerals: 4.1.0
roman-numerals-py: 4.1.0
rpds-py: 0.30.0
s3fs: 2026.2.0
s3transfer: 0.16.0
scikit-image: 0.26.0
scipy: 1.14.0
setuptools: 80.9.0
sfftk-rw: 0.8.1
six: 1.17.0
smbprotocol: 1.16.0
snowballstemmer: 3.0.1
sortedcontainers: 2.4.0
soupsieve: 2.8.3
Sphinx: 8.2.3
sphinx-autodoc-typehints: 3.2.0
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
sse-starlette: 3.2.0
sshfs: 2025.11.0
stack-data: 0.6.3
starfile: 0.5.13
starlette: 0.52.1
strcase: 1.0.0
superqt: 0.7.6
tables: 3.10.2
tblib: 3.2.2
tcia_utils: 1.5.1
textual: 8.0.0
tifffile: 2025.3.13
tinyarray: 1.2.5
toolz: 1.1.0
tornado: 6.5.4
tqdm: 4.67.3
traitlets: 5.14.3
trimesh: 4.11.2
trove-classifiers: 2026.1.14.14
typing-inspection: 0.4.2
typing_extensions: 4.15.0
tzdata: 2025.3
uc-micro-py: 1.0.3
urllib3: 2.6.3
uvicorn: 0.40.0
wcwidth: 0.3.2
webcolors: 24.11.1
wheel: 0.45.1
wheel-filename: 1.4.2
widgetsnbextension: 4.0.15
wrapt: 2.1.1
yarl: 1.22.0
zarr: 2.18.7
zict: 3.0.0
zipp: 3.23.0
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