Timeline



Jul 15, 2026: Today

6:06 PM Ticket #20763 (Invalid escape sequence \* warning at startup in volume code) closed by Tom Goddard
fixed
6:05 PM Ticket #20763 (Invalid escape sequence \* warning at startup in volume code) reopened by Tom Goddard
Fixed. Volume save_map() function doc string had \*.cmap and \*.mrc …
5:48 PM Ticket #20763 (Invalid escape sequence \* warning at startup in volume code) closed by Tom Goddard
fixed: I didn't get this warning the second time I started this daily build, …
5:46 PM Ticket #20763 (Invalid escape sequence \* warning at startup in volume code) created by goddard@…
[…]
3:01 PM Ticket #20758 ('zone' command uses dead residue) closed by Tom Goddard
fixed: Fixed. The zone mouse mode gave an error when dragging to increase …
4:29 AM Ticket #20762 (Minimization failure: KeyError: 'N') created by gwshim0189@…
[…]

Jul 14, 2026: Yesterday

3:44 PM Ticket #20761 (Color blobs mouse mode is choosing transparent colors) closed by Tom Goddard
fixed: Fixed. There was an overflow in the computation of the clicked …
3:15 PM ChangeLog edited by Greg Couch
(diff)
3:06 PM Ticket #20761 (Color blobs mouse mode is choosing transparent colors) created by goddard@…
[…]
2:57 PM Ticket #20760 (TypeError: setChecked(self, a0: bool): argument 1 has unexpected type ...) closed by Tom Goddard
fixed: Fixed. Cast from numpy.bool to Python bool in volume viewer gui code.
2:50 PM Ticket #20760 (TypeError: setChecked(self, a0: bool): argument 1 has unexpected type ...) created by goddard@…
[…]
2:18 PM Ticket #20759 (OpenGL "invalid framebuffer operation" in glclear after display reconnected) created by goddard@…
[…]
2:02 PM Ticket #20600 (Minimization of RNA fails) closed by Eric Pettersen
fixed: Fixed in tomorrow's daily build. Fix: …
12:21 PM Ticket #20758 ('zone' command uses dead residue) created by chimerax-bug-report@…
[…]
10:56 AM Ticket #20750 (numpy bool no longer accepted by QCheckBox.setChecked()) closed by Eric Pettersen
fixed: Fix: …
6:59 AM Ticket #20757 (DLL load failed while importing: An Application Control policy has ...) created by chimerax-bug-report@…
[…]

Jul 13, 2026:

7:07 PM Ticket #20756 (DLL load failed while importing: An Application Control policy has ...) created by chimerax-bug-report@…
[…]
5:49 PM Ticket #20751 (Failed to create D3D11 swapchain) closed by Tom Goddard
nonchimerax: Nvidia graphics driver problem, Windows. I'd try rebooting the …
5:42 PM Ticket #20749 (Save image/movie, no opengl context) closed by Tom Goddard
nonchimerax: There are several problems here. First the user tries "movie encode …
5:27 PM Ticket #20748 (COD bond-perception bug) closed by Greg Couch
duplicate: Duplicate of . Likely fixed by recent change.
5:22 PM Ticket #20605 (glClear: invalid framebuffer operation drawing scene) closed by Tom Goddard
duplicate: This ChimeraX error is caused by a bug in the Mac Qt window toolkit …
5:18 PM Ticket #20755 (The GPU device instance has been suspended) closed by Eric Pettersen
duplicate
5:15 PM Ticket #20754 (The GPU device instance has been suspended) closed by Eric Pettersen
duplicate
4:54 PM Dev2026-07-13 edited by Tom Goddard
(diff)
3:00 PM Ticket #20753 (The GPU device instance has been suspended) closed by Eric Pettersen
duplicate
2:57 PM Ticket #20752 (The GPU device instance has been suspended) closed by Eric Pettersen
duplicate
2:03 PM Ticket #20745 (Trac database down (was: Re: COD bond-perception bug)) closed by Eric Pettersen
fixed
1:05 PM Ticket #20755 (The GPU device instance has been suspended) created by chimerax-bug-report@…
[…]
1:05 PM Ticket #20754 (The GPU device instance has been suspended) created by chimerax-bug-report@…
[…]
1:05 PM Ticket #20753 (The GPU device instance has been suspended) created by chimerax-bug-report@…
[…]
1:05 PM Ticket #20752 (The GPU device instance has been suspended) created by chimerax-bug-report@…
[…]
1:05 PM Ticket #20751 (Failed to create D3D11 swapchain) created by chimerax-bug-report@…
[…]
1:05 PM Ticket #20750 (numpy bool no longer accepted by QCheckBox.setChecked()) created by Tristan Croll
[…]
1:05 PM Ticket #20749 (Save image/movie, no opengl context) created by chimerax-bug-report@…
[…]
1:05 PM Ticket #20748 (COD bond-perception bug) created by Tristan Croll
[…] [[Image(...)]]
1:05 PM Ticket #20747 (Movie: save duplicate images: No such file or directory) created by chimerax-bug-report@…
[…]
1:05 PM Ticket #20746 (Corecif has metal coordination bonds only) created by Tristan Croll
[…] Description Picked up a new pathological case for corecif: …
12:09 PM Ticket #20745 (Trac database down (was: Re: COD bond-perception bug)) created by Greg Couch
[…]

Jul 11, 2026:

1:55 AM Ticket #20608 (ChatGPT use of ChimeraX: Python library missing) created by chimerax-bug-report@…
[…]

Jul 10, 2026:

6:50 PM Ticket #20607 (OpenFold prediction: "MMseqs2 API is giving errors", empty MSA gets ...) closed by Tom Goddard
fixed: Fixed. Tested the pinned requests 2.32.5 with ChimeraX openfold …
5:37 PM Ticket #20607 (OpenFold prediction: "MMseqs2 API is giving errors", empty MSA gets ...) created by goddard@…
[…]
4:33 PM Ticket #20572 (File Save dialog issues command without specifying "format" option) closed by Eric Pettersen
fixed: Fix: …
2:55 PM 2026-7-9 edited by Tom Goddard
(diff)
2:49 PM DeveloperMeetings edited by Tom Goddard
(diff)
2:07 PM Ticket #20551 (mmCIF handles non-orthogonal cells incorrectly) closed by Greg Couch
fixed: So Claude's bug was not a bug. So to_cartesian() has been reverted. …
1:57 PM Ticket #20604 (aniso_u6 not copied) closed by Eric Pettersen
fixed: Fixed in tomorrow's build. Fix: …
1:50 PM Ticket #20606 (Intersection operator (&) does not maintain atom ordering) created by mdmxd4@…
[…]
1:17 PM Ticket #20592 (Delay pyKVFinder install until absolutely necessary) closed by Eric Pettersen
fixed: Fixed in tomorrow's daily build. Fix: …
12:08 PM Ticket #20605 (glClear: invalid framebuffer operation drawing scene) created by pujanajmera1@…
[…]
11:50 AM Ticket #20538 (Problem restoring pseudo bonds in scenes) closed by Eric Pettersen
fixed: Fix: …
10:13 AM Ticket #20603 (Minimization failure: KeyError: 'N') closed by Eric Pettersen
can't reproduce: Works fine with the regular 6LUB entry, so would need file to reproduce.
10:07 AM Ticket #20602 (Proofpoint Essentials - Quarantine Digest) closed by Eric Pettersen
not a bug
9:40 AM Ticket #20604 (aniso_u6 not copied) created by Tristan Croll
[…]
12:34 AM Ticket #20603 (Minimization failure: KeyError: 'N') created by chimerax-bug-report@…
[…]

Jul 9, 2026:

9:03 PM Ticket #20602 (Proofpoint Essentials - Quarantine Digest) created by do-not-reply@…
[…]
5:31 PM Ticket #20601 (Problem aligning structure and map) closed by Tom Goddard
not a bug: The x-ray map from the Electron Density Server (ChimeraX command "open …
1:43 PM Ticket #20595 (Session save: cannot import name 'get_session_info' from ...) closed by Eric Pettersen
duplicate: Hi Krish, This is the same problem you reported yesterday, and the …
11:08 AM Ticket #20601 (Problem aligning structure and map) created by openstomata@…
[…] PDB and eds.png
10:45 AM Ticket #20600 (Minimization of RNA fails) created by bruno.haymele@…
Minimization of RNA fails, e.g. 9kgg and the file attached to this ticket.
5:24 AM Ticket #20599 (Problems installing ISOLDE) created by renato.weisse@…
[…]

Jul 8, 2026:

10:02 PM Ticket #20547 (Sequence viewer holding reference to deleted chain) closed by Eric Pettersen
fixed: Hi Mohammad, Thanks for reporting this problem. It is fixed in the …
5:24 PM Ticket #20598 (Make mutation score residue coloring use gray for unassociated residues) closed by Tom Goddard
fixed: Done.
5:20 PM Ticket #20598 (Make mutation score residue coloring use gray for unassociated residues) created by goddard@…
[…]
5:09 PM Ticket #20596 (Associating structure to mutation scores reports wrong alignment summary) closed by Tom Goddard
fixed: Fixed. It was reporting the number of associated residues with …
3:47 PM Ticket #20597 (Opening mutation score .csv file does to show the scores in the order ...) created by goddard@…
[…]
3:44 PM Ticket #20596 (Associating structure to mutation scores reports wrong alignment summary) created by goddard@…
[…]
12:06 PM Ticket #20593 (glClear: invalid framebuffer operation on statusbar expose) closed by Tom Goddard
duplicate: This ChimeraX error is fixed in the current ChimeraX 1.12 release. It …
11:58 AM Ticket #20595 (Session save: cannot import name 'get_session_info' from ...) created by rkrishnan@…
[…]
9:51 AM Ticket #20594 (Session save: cannot import name 'get_session_info' from ...) closed by Eric Pettersen
fixed: Hi Krish, Thanks for reporting this problem. It was fixed about a …
8:43 AM Ticket #20594 (Session save: cannot import name 'get_session_info' from ...) created by rkrishnan@…
[…]
Note: See TracTimeline for information about the timeline view.