Opened 8 years ago

Closed 8 years ago

#932 closed defect (fixed)

AddH crashes when PDB file does not contain SEQRES records

Reported by: Tristan Croll Owned by: Eric Pettersen
Priority: moderate Milestone:
Component: Structure Editing Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

A couple of object/property names not changed in the move from Chimera. In addh/util.py, line 43 should be:

                if chain.from_seqres == None:

... and line 48 should be:

                logger.info(" guessing termini instead")

Change History (2)

comment:1 by Eric Pettersen, 8 years ago

Status: assigned → accepted

comment:2 by Eric Pettersen, 8 years ago

Resolution: → fixed
Status: accepted → closed

Thanks for pointing out these problems. Since chain.from_seqres is now just a boolean rather than a 3-state (including None) variable, the code change was slightly more extensive than your suggestions. The next build will have them; you might want to verify that they work correctly...

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