Graphics crash, macOS 12.5.1, Intel HD Graphics 6000

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.5 (2022-11-24 00:03:27 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted

Thread 0x000070000dc3c000 (most recent call first):

File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 316 in wait
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 574 in wait
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 1297 in run
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap

Current thread 0x000000010e20c600 (most recent call first):

File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/opengl.py", line 235 in swap_buffers
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/opengl.py", line 497 in swap_buffers
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/view.py", line 191 in draw
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 73 in draw_new_frame
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139 in _redraw_timer_callback
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 283 in event_loop
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/main.py", line 884 in init
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/main.py", line 1035 in
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/private/var/folders/0h/b7_nc8zd1tgd5mhwjmcmmhww0000gn/T/AppTranslocation/97E18513-99A2-4475-B793-03B14368191D/d/ChimeraX-1.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main

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"procLaunch" : "2023-02-26 21:39:18.4716 -0800",
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"version" : 2,
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"incident" : "61A1AC63-7F89-4121-B374-193F28E5420D",
"bug_type" : "309",
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"wakeTime" : 3847,
"sleepWakeUUID" : "9F07D656-1B6C-458E-B127-9C65FAE1FEFC",
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"exception" : {"codes":"0x0000000000000000, 0x0000000000000000","rawCodes":[0,0],"type":"EXC_CRASH","signal":"SIGABRT"},
"asi" : {"libsystem_c.dylib":abort() called},
"asiSignatures" : Graphics hardware encountered an error and was reset: 0x00000002\n,
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},
{

"source" : "P",
"arch" : "x86_64h",
"base" : 140703342276608,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.CoreFoundation",
"size" : 5255168,
"uuid" : "c39123bf-9d62-3577-a11f-0a97cc4d9991",
"path" : "\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation",
"name" : "CoreFoundation",
"CFBundleVersion" : "1866"

},
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"source" : "P",
"arch" : "x86_64",
"base" : 140703490117632,
"CFBundleShortVersionString" : "2.1.1",
"CFBundleIdentifier" : "com.apple.HIToolbox",
"size" : 3096576,
"uuid" : "95eab511-8fc1-353a-ac8a-26aa19032e2e",
"path" : "\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox",
"name" : "HIToolbox"

},
{

"source" : "P",
"arch" : "x86_64",
"base" : 4423364608,
"CFBundleShortVersionString" : "1.5.0",
"CFBundleIdentifier" : "edu.ucsf.cgl.ChimeraX",
"size" : 4096,
"uuid" : "5df621ee-554e-36a8-b448-93b2334e5480",
"path" : "\/Volumes\/VOLUME\/*\/ChimeraX-1.5.app\/Contents\/MacOS\/ChimeraX",
"name" : "ChimeraX",
"CFBundleVersion" : "1.5.0.0"

},
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"source" : "P",
"arch" : "x86_64",
"base" : 4531470336,
"size" : 442368,
"uuid" : "f71fb3ca-5fcc-3577-9457-b047888a46d1",
"path" : "\/usr\/lib\/dyld",
"name" : "dyld"

},
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"source" : "P",
"arch" : "x86_64",
"base" : 4451315712,
"size" : 64028672,
"uuid" : "24c9d5c5-4854-3af4-9550-cb0204044dfa",
"path" : "\/Volumes\/VOLUME\/*\/ChimeraX-1.5.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib",
"name" : "libopenblas64_.0.dylib"

},
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"source" : "P",
"arch" : "x86_64",
"base" : 4988456960,
"size" : 165052416,
"uuid" : "4aa1de3e-464c-340c-ab61-bcd39bfc7658",
"path" : "\/Volumes\/VOLUME\/*\/ChimeraX-1.5.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore",
"name" : "QtWebEngineCore"

}

],

"sharedCache" : {
"base" : 140703338704896,
"size" : 19331678208,
"uuid" : "4d3a144c-02bb-31f1-bca9-83a5cb058c59"

},

"vmSummary" : "ReadOnly portion of Libraries: Total=1.4G resident=0K(0%) swapped_out_or_unallocated=1.4G(100%)\nWritable regions: Total=1.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.0G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 768K 6 \nActivity Tracing 256K 1 \nCG backing stores 544K 4 \nCG image 128K 26 \nColorSync 228K 27 \nCoreAnimation 96K 19 \nCoreGraphics 12K 2 \nCoreUI image data 1992K 28 \nFoundation 16K 1 \nKernel Alloc Once 8K 1 \nMALLOC 363.8M 632 \nMALLOC guard page 32K 8 \nMALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)\nMALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)\nMach message 16K 3 \nObjC additional data 15K 1 \nOpenGL GLSL 384K 4 \nSTACK GUARD 92K 23 \nStack 162.7M 24 \nStack Guard 56.0M 1 \nVM_ALLOCATE 90.1M 119 \nCTF 756 1 \nDATA 44.4M 662 \nDATA_CONST 31.2M 339 \nDATA_DIRTY 1641K 213 \nFONT_DATA 4K 1 \nGLSLBUILTINS 5176K 1 \nLINKEDIT 675.1M 138 \nTEXT 789.9M 661 \nUNICODE 592K 1 \ndyld private memory 1184K 3 \nmapped file 484.6M 54 \nshared memory 2984K 26 \n=========== ======= ======= \nTOTAL 3.0G 3032 \nTOTAL, minus reserved VM space 2.7G 3032 \n",
"legacyInfo" : {
"threadTriggered" : {

"name" : "CrBrowserMain",
"queue" : "com.apple.main-thread"

}

},

"trialInfo" : {
"rollouts" : [

{

"rolloutId" : "5ffde50ce2aacd000d47a95f",
"factorPackIds" : {

},
"deploymentId" : 240000251

},
{

"rolloutId" : "6112e14f37f5d11121dcd519",
"factorPackIds" : {

"SIRI_TEXT_TO_SPEECH" : "634710168e8be655c1316aaa"

},
"deploymentId" : 240000229

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],
"experiments" : [

]

}
}

Log before crash start

UCSF ChimeraX version: 1.5 (2022-11-24)
© 2016-2022 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX

open /Users/hoanglan/Downloads/5u74.pdb

5u74.pdb title:
Structure of human niemann-pick C1 protein [more info...]

Chain information for 5u74.pdb #1
---
Chain | Description | UniProt
A | niemann-pick C1 protein | NPC1_HUMAN

Non-standard residues in 5u74.pdb #1
---
MAN — α-D-mannopyranose
MES — 2-(N-morpholino)-ethanesulfonic acid
NAG — 2-acetamido-2-deoxy-β-D-glucopyranose

select helix

4494 atoms, 4573 bonds, 565 residues, 1 model selected

color sel cyan

undo

select /A

7185 atoms, 7379 bonds, 2 pseudobonds, 909 residues, 2 models selected

undo

show cartoons

undo

style ball

Changed 7291 atom styles

select add #1

7291 atoms, 7493 bonds, 2 pseudobonds, 917 residues, 2 models selected

select subtract #1

Nothing selected

select helix

4494 atoms, 4573 bonds, 565 residues, 1 model selected

log metadata #1

Metadata for 5u74.pdb #1
---
Title | Structure of human niemann-pick C1 protein
Citation | 3.3 angstrom structure of niemann-pick C1 protein revealsinsights
INTO the function of the C-terminal luminal domainin cholesterol transport.
PMID: 28784760
Non-standard residues | MAN — α-D-mannopyranose
MES — 2-(N-morpholino)-ethanesulfonic acid
NAG — 2-acetamido-2-deoxy-β-D-glucopyranose
Gene source | Homo sapiens (human)
Experimental method | X-ray diffraction
Resolution | 3.34Å

sequence chain #1/A

Alignment identifier is 1/A

select
/A:404-411,418-420,429-431,547-548,560-567,600-604,888-893,958-960,966-967,976-978,1025-1027,1031-1033,1036-1041,1080-1081

481 atoms, 484 bonds, 57 residues, 1 model selected

select helix

4494 atoms, 4573 bonds, 565 residues, 1 model selected

show sel atoms

hide sel atoms

show sel atoms

hide sel atoms

show sel cartoons

hide sel cartoons

show sel cartoons

select /A:396

8 atoms, 7 bonds, 1 residue, 1 model selected

select /A:386-396

97 atoms, 98 bonds, 11 residues, 1 model selected

undo

select /A:396-397

17 atoms, 16 bonds, 2 residues, 1 model selected

select /A:394-397

40 atoms, 41 bonds, 4 residues, 1 model selected

undo

select /A:396

8 atoms, 7 bonds, 1 residue, 1 model selected

select /A:386-396

97 atoms, 98 bonds, 11 residues, 1 model selected

select helix

4494 atoms, 4573 bonds, 565 residues, 1 model selected

select /A:386

6 atoms, 5 bonds, 1 residue, 1 model selected

select /A:386-396

97 atoms, 98 bonds, 11 residues, 1 model selected

color sel yellow

color sel orange red

color sel forest green

color sel cyan

select /A:491

6 atoms, 5 bonds, 1 residue, 1 model selected

select /A:491-495

37 atoms, 37 bonds, 5 residues, 1 model selected

color sel cyan

select /A:496-497

18 atoms, 18 bonds, 2 residues, 1 model selected

select /A:496-497

18 atoms, 18 bonds, 2 residues, 1 model selected

undo

select /A:491

6 atoms, 5 bonds, 1 residue, 1 model selected

select /A:491-496

45 atoms, 45 bonds, 6 residues, 1 model selected

select helix

4494 atoms, 4573 bonds, 565 residues, 1 model selected

select /A:491

6 atoms, 5 bonds, 1 residue, 1 model selected

select /A:491-496

45 atoms, 45 bonds, 6 residues, 1 model selected

color sel cyan

select /A:508

8 atoms, 7 bonds, 1 residue, 1 model selected

select /A:508-517

91 atoms, 95 bonds, 10 residues, 1 model selected

color sel cyan

select
/A:334-369,377-382,386-396,432-451,463-468,483-489,491-496,508-517,542-545,554-558,574-593,608-617,620-638,653-679,683-712,719-750,754-792,817-831,834-852,871-883,901-907,918-929,942-955,993-1005,1019-1023,1047-1069,1084-1117,1120-1145,1150-1177,1182-1199,1202-1216,1218-1252

4494 atoms, 4573 bonds, 565 residues, 1 model selected

color sel yellow

undo

select /A:386

6 atoms, 5 bonds, 1 residue, 1 model selected

select /A:386-396

97 atoms, 98 bonds, 11 residues, 1 model selected

Log before crash end

Log:
UCSF ChimeraX version: 1.5 (2022-11-24)
© 2016-2022 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX

OpenGL version: 4.1 INTEL-18.8.4
OpenGL renderer: Intel(R) HD Graphics 6000
OpenGL vendor: Intel Inc.

Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:

Hardware Overview:

Model Name: MacBook Air
Model Identifier: MacBookAir7,2
Processor Name: Dual-Core Intel Core i5
Processor Speed: 1.6 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 256 KB
L3 Cache: 3 MB
Hyper-Threading Technology: Enabled
Memory: 4 GB
System Firmware Version: 430.140.3.0.0
OS Loader Version: 540.120.3~19
SMC Version (system): 2.27f2

Software:

System Software Overview:

System Version: macOS 12.5.1 (21G83)
Kernel Version: Darwin 21.6.0
Time since boot: 14:54

Graphics/Displays:

Intel HD Graphics 6000:

Chipset Model: Intel HD Graphics 6000
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x1626
Revision ID: 0x0009
Metal Family: Supported, Metal GPUFamily macOS 1
Displays:

Color LCD:

Display Type: LCD
Resolution: 1440 x 900 (Widescreen eXtended Graphics Array Plus)
UI Looks like: 1440 x 900
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal

Installed Packages:

alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.1.0
Babel: 2.11.0
backcall: 0.2.0
blockdiag: 3.0.0
build: 0.8.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 2.1.1
ChimeraX-AddCharge: 1.4
ChimeraX-AddH: 2.2.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2.1
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.6
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.41.5
ChimeraX-AtomicLibrary: 8.0.3
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.7.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.1
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.2
ChimeraX-CommandLine: 1.2.4
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.5
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.1
ChimeraX-DistMonitor: 1.3
ChimeraX-DockPrep: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.2
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.1
ChimeraX-MatchMaker: 2.0.9
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.8
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.6
ChimeraX-ModelPanel: 1.3.6
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.1
ChimeraX-MouseModes: 1.1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.9.1
ChimeraX-PDB: 2.6.8
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.7.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.1.3
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.24.3
ChimeraX-uniprot: 2.2.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.1.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.1
ChimeraX-WebServices: 1.1.0
ChimeraX-Zone: 1.0.1
colorama: 0.4.5
cxservices: 1.2
cycler: 0.11.0
Cython: 0.29.32
debugpy: 1.6.4
decorator: 5.1.1
docutils: 0.19
entrypoints: 0.4
executing: 1.2.0
filelock: 3.7.1
fonttools: 4.38.0
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.7.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.33
imagecodecs: 2022.7.31
imagesize: 1.4.1
importlib-metadata: 5.1.0
ipykernel: 6.15.3
ipython: 8.4.0
ipython-genutils: 0.2.0
jedi: 0.18.1
Jinja2: 3.1.2
jupyter-client: 7.3.4
jupyter-core: 5.1.0
kiwisolver: 1.4.4
line-profiler: 3.5.1
lxml: 4.9.1
lz4: 4.0.2
MarkupSafe: 2.1.1
matplotlib: 3.5.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.0
networkx: 2.8.5
numexpr: 2.8.4
numpy: 1.23.1
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.2.0
pip: 22.2.2
pkginfo: 1.8.3
platformdirs: 2.5.4
prompt-toolkit: 3.0.33
psutil: 5.9.1
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.12.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.2
python-dateutil: 2.8.2
pytz: 2022.6
pyzmq: 24.0.1
qtconsole: 5.3.1
QtPy: 2.3.0
RandomWords: 0.4.0
requests: 2.28.1
scipy: 1.9.0
setuptools: 65.1.1
setuptools-scm: 7.0.5
sfftk-rw: 0.7.2
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 5.1.1
sphinx-autodoc-typehints: 1.19.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tifffile: 2022.7.31
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.2
traitlets: 5.3.0
typing-extensions: 4.4.0
urllib3: 1.26.13
wcwidth: 0.2.5
webcolors: 1.12
wheel: 0.37.1
wheel-filename: 1.4.1
zipp: 3.11.0

[Tom Goddard]

Apple Intel graphics driver crash.