Opened 3 years ago

Closed 3 years ago

#7833 closed defect (fixed)

problems w/ complex atomspec in "show" command

Reported by: Elaine Meng Owned by: Tom Goddard
Priority: moderate Milestone:
Component: Command Line Version:
Keywords: Cc: Eric Pettersen
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

I was surprised that neither of these commands do anything:

show (#2 & :3hb :<4.5) models
show "#2 & :3hb :<4.5" models

I had to separate it into these 3 commands instead:

sel #2 & :3hb :<4.5
show sel models
~sel

Example script and data file attached

Attachments (2)

2dkh-channels.json​ (977.3 KB ) - added by Elaine Meng 3 years ago.
2dkh-mole-old.cxc​ (449 bytes ) - added by Elaine Meng 3 years ago.
The two versions of the command that don't work are commented out. The (theoretically equivalent to either of them) 3 commands that do work are not commented out and would be executed if you just open the file.

Download all attachments as: .zip

Change History (3)

by Elaine Meng, 3 years ago

Attachment: 2dkh-channels.json​ added

by Elaine Meng, 3 years ago

Attachment: 2dkh-mole-old.cxc​ added

The two versions of the command that don't work are commented out. The (theoretically equivalent to either of them) 3 commands that do work are not commented out and would be executed if you just open the file.

comment:1 by Tom Goddard, 3 years ago

Resolution: → fixed
Status: assigned → closed

Fixed in 1.6 and daily builds. Not in 1.5.

Structure atomspec_zone() code only add atoms, not the structure itself to the Objects instance.

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