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Opened 3 years ago
Closed 3 years ago
#7115 closed defect (duplicate)
ChimeraX bug report submission
| Reported by: | Owned by: | ||
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
ChimeraX Version: 1.4 (2022-06-03 23:39:42 UTC)
Description
(Describe the actions that caused this problem to occur here)
on wsl2
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.4 (2022-06-03)
© 2016-2022 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
> help help:user
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
> help help:quickstart
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 84, in _expose_event
self.status(self._last_message, self._last_color)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 151, in status
self._draw_text(msg, color, secondary)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/ui/statusbar.py", line 161, in _draw_text
draw_overlays(dlist, self._renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1579, in draw_overlays
_draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 763, in draw_self
self._draw_geometry(renderer, transparent_only = any_opaque)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
> open /home/kamadak/1ecr.cif
1ecr.cif title:
Escherichia coli replication terminator protein (tus) complexed with DNA [more
info...]
Chain information for 1ecr.cif #1
---
Chain | Description | UniProt
A | protein (replication-terminator protein) | TUS_ECOLI
B | DNA (5'-D(*TP*TP*ap*GP*TP*TP*ap*CP*ap*ap*CP*ap*TP*ap*CP*T)-3 |
C | DNA (5'-D(*TP*ap*GP*TP*ap*TP*GP*TP*TP*GP*TP*ap*ap*CP*TP*A)-3 |
An error occurred in drawing the scene. Redrawing graphics is now stopped to
avoid a continuous stream of error messages. To restart graphics use the
command "graphics restart" after changing the settings that caused the error.
Attempt to retrieve context when no valid context
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/core/updateloop.py", line 73, in draw_new_frame
view.draw(check_for_changes = False)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/view.py", line 165, in draw
self._draw_scene(camera, drawings)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/view.py", line 235, in _draw_scene
draw_opaque(r, opaque_drawings)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1526, in draw_opaque
_draw_multiple(drawings, renderer, Drawing.OPAQUE_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 759, in draw_self
self._draw_geometry(renderer, opaque_only = any_transp)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
Traceback (most recent call last):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/core/triggerset.py", line 134, in invoke
return self._func(self._name, data)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/core/filehistory.py", line 73, in <lambda>
t.add_handler('frame drawn', lambda *args, s=self: s.capture_thumbnails_cb())
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/core/filehistory.py", line 85, in capture_thumbnails_cb
fs.capture_image(models, ses)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/core/filehistory.py", line 173, in capture_image
self.image = models_image(session, models, size)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/core/filehistory.py", line 235, in models_image
image = v.image(width, height, camera = c, drawings = models)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/view.py", line 415, in image
rgba = self.image_rgba(width=width, height=height, supersample=supersample,
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/view.py", line 465, in image_rgba
self.draw(c, drawings, swap_buffers = False)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/view.py", line 165, in draw
self._draw_scene(camera, drawings)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/view.py", line 235, in _draw_scene
draw_opaque(r, opaque_drawings)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1526, in draw_opaque
_draw_multiple(drawings, renderer, Drawing.OPAQUE_DRAW_PASS)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1539, in _draw_multiple
d.draw(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 752, in draw
self.draw_self(renderer, draw_pass)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 759, in draw_self
self._draw_geometry(renderer, opaque_only = any_transp)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 786, in _draw_geometry
ds.activate_bindings(renderer)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1898, in activate_bindings
self.update_buffers()
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/drawing.py", line 1888, in update_buffers
bi.bind_shader_variable(b)
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/chimerax/graphics/opengl.py", line 2514, in bind_shader_variable
GL.glVertexAttribPointer(attr_id, ncomp, gtype, normalize, 0, None)
File "src/latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/GL/VERSION/GL_2_0.py", line 469, in glVertexAttribPointer
contextdata.setValue( key, array )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 58, in setValue
context = getContext( context )
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
OpenGL.error.Error: Attempt to retrieve context when no valid context
Error processing trigger "frame drawn":
OpenGL.error.Error: Attempt to retrieve context when no valid context
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-
packages/OpenGL/contextdata.py", line 40, in getContext
raise error.Error(
See log for complete Python traceback.
OpenGL version: 3.3 (Core Profile) Mesa 21.2.6
OpenGL renderer: D3D12 (AMD Radeon(TM) Vega 8 Graphics)
OpenGL vendor: Microsoft Corporation
Python: 3.9.11
Locale: en_US.UTF-8
Qt version: PyQt6 6.3.0, Qt 6.3.0
Qt runtime version: 6.3.0
Qt platform: wayland
XDG_SESSION_TYPE=
DESKTOP_SESSION=
XDG_SESSION_DESKTOP=
XDG_CURRENT_DESKTOP=
WAYLAND_DISPLAY=wayland-0
DISPLAY=:0
Manufacturer: unknown
Model: unknown
OS: Ubuntu 20.04 focal
Architecture: 64bit ELF
Virtual Machine: wsl
CPU: 8 AMD Ryzen 5 3500U with Radeon Vega Mobile Gfx
Cache Size: 512 KB
Memory:
total used free shared buff/cache available
Mem: 14Gi 658Mi 10Gi 25Mi 3.0Gi 13Gi
Swap: 4.0Gi 0B 4.0Gi
Graphics:
unknown
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
Babel: 2.10.1
backcall: 0.2.0
blockdiag: 3.0.0
certifi: 2022.5.18.1
cftime: 1.6.0
charset-normalizer: 2.0.12
ChimeraX-AddCharge: 1.2.3
ChimeraX-AddH: 2.1.11
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2.1
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.4.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.39.1
ChimeraX-AtomicLibrary: 7.0
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.1
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.7
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.1
ChimeraX-CommandLine: 1.2.3
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.4
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.1
ChimeraX-DistMonitor: 1.1.5
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.2
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1.1
ChimeraX-LinuxSupport: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.6
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.7
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.5.5
ChimeraX-ModelPanel: 1.3.2
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.9
ChimeraX-PDB: 2.6.6
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.8
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.0.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.1
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.18.3
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.2
cycler: 0.11.0
Cython: 0.29.26
debugpy: 1.6.0
decorator: 5.1.1
distro: 1.6.0
docutils: 0.17.1
entrypoints: 0.4
filelock: 3.4.2
fonttools: 4.33.3
funcparserlib: 1.0.0
grako: 3.16.5
h5py: 3.7.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.27
imagecodecs: 2021.11.20
imagesize: 1.3.0
ipykernel: 6.6.1
ipython: 7.31.1
ipython-genutils: 0.2.0
jedi: 0.18.1
Jinja2: 3.0.3
jupyter-client: 7.1.0
jupyter-core: 4.10.0
kiwisolver: 1.4.2
line-profiler: 3.4.0
lxml: 4.7.1
lz4: 3.1.10
MarkupSafe: 2.1.1
matplotlib: 3.5.1
matplotlib-inline: 0.1.3
msgpack: 1.0.3
nest-asyncio: 1.5.5
netCDF4: 1.5.8
networkx: 2.6.3
numexpr: 2.8.1
numpy: 1.22.1
openvr: 1.16.802
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.0.1
pip: 21.3.1
pkginfo: 1.8.2
prompt-toolkit: 3.0.29
psutil: 5.9.0
ptyprocess: 0.7.0
pycollada: 0.7.2
pydicom: 2.2.2
Pygments: 2.11.2
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
PyQt6-commercial: 6.3.0
PyQt6-Qt6: 6.3.0
PyQt6-sip: 13.3.1
PyQt6-WebEngine-commercial: 6.3.0
PyQt6-WebEngine-Qt6: 6.3.0
python-dateutil: 2.8.2
pytz: 2022.1
pyzmq: 23.1.0
qtconsole: 5.3.0
QtPy: 2.1.0
RandomWords: 0.3.0
requests: 2.27.1
scipy: 1.7.3
setuptools: 59.8.0
sfftk-rw: 0.7.2
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.3.2
sphinx-autodoc-typehints: 1.15.2
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-community: 1.0.0
tables: 3.7.0
tifffile: 2021.11.2
tinyarray: 1.2.4
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.9
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.1
wheel-filename: 1.3.0
Change History (1)
comment:1 by , 3 years ago
| Component: | Unassigned → Graphics |
|---|---|
| Platform: | → all |
| Project: | → ChimeraX |
| Resolution: | → duplicate |
| Status: | new → closed |
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Duplicate of #7114.