Opened 4 years ago
Closed 4 years ago
#5556 closed defect (nonchimerax)
Crash showing selection on alphafold model (swap buffers?)
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.19042
ChimeraX Version: 1.3rc202111060828 (2021-11-06 08:28:15 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in Windows fatal exception: code 0x8001010eeve
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
ntWindows fatal exception: _code 0xl8001010eo
op
Windows fatal exception: code 0x8001010e
File Windows fatal exception: "code 0xC8001010e:
\PWindows fatal exception: rcode 0xo8001010eg
raWindows fatal exception: mcode 0x 8001010eF
ilWindows fatal exception: ecode 0xs8001010e\
ChWindows fatal exception: icode 0xm8001010ee
raWindows fatal exception: Xcode 0x 8001010e1
.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Windows fatal exception: Fcode 0xi8001010el
es\Windows fatal exception: Ccode 0xh8001010ei
meWindows fatal exception: rcode 0xa8001010eX
1Windows fatal exception: .code 0x38001010er
c2Windows fatal exception: 0code 0x28001010e1
11Windows fatal exception: 0code 0x68001010e0
82Windows fatal exception: 8code 0x\8001010eb
inWindows fatal exception: \code 0xl8001010ei
b\Windows fatal exception: rcode 0xu8001010en
pyWindows fatal exception: .code 0xp8001010ey
", line Windows fatal exception: 87code 0x in 8001010e_
run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc20Windows fatal exception: 2code 0x18001010e1
106Windows fatal exception: 0code 0x88001010e2
8\Windows fatal exception: bcode 0xi8001010en
\lWindows fatal exception: icode 0xb8001010e\
ruWindows fatal exception: ncode 0xp8001010ey
.pWindows fatal exception: ycode 0x"8001010e, line
87 in Windows fatal exception: _code 0xr8001010eu
n_Windows fatal exception: ccode 0xo8001010ed
e
Windows fatal exception: File code 0x"8001010eC
:\Windows fatal exception: Pcode 0xr8001010eo
grWindows fatal exception: acode 0xm8001010e
Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010eP
roWindows fatal exception: gcode 0xr8001010ea
m Windows fatal exception: Fcode 0xi8001010el
esWindows fatal exception: \code 0xC8001010eh
imWindows fatal exception: ecode 0xr8001010ea
X Windows fatal exception: 1code 0x.8001010e3
rcWindows fatal exception: 2code 0x08001010e2
111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04Windows fatal exception: (most recent call first):
code 0x File 8001010e"
C:\PWindows fatal exception: rcode 0xo8001010eg
raWindows fatal exception: mcode 0x 8001010eF
ileWindows fatal exception: scode 0x\8001010eC
himeWindows fatal exception: rcode 0xa8001010eX
1.Windows fatal exception: 3code 0xr8001010ec
20Windows fatal exception: 2code 0x18001010e1
10Windows fatal exception: 6code 0x08001010e8
28Windows fatal exception: \code 0xb8001010ei
n\Windows fatal exception: lcode 0xi8001010eb
\sWindows fatal exception: icode 0xt8001010ee
-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: acode 0xx8001010e\
uiWindows fatal exception: \code 0xg8001010eu
i.Windows fatal exception: pcode 0xy8001010e"
, line 301Windows fatal exception: in code 0xe8001010ev
enWindows fatal exception: tcode 0x_8001010el
ooWindows fatal exception: pcode 0x
8001010e File
"CWindows fatal exception: :code 0x\8001010eP
roWindows fatal exception: gcode 0xr8001010ea
m Windows fatal exception: Fcode 0x8001010ei
les\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\libWindows fatal exception: \code 0xs8001010ei
te-Windows fatal exception: pacode 0xc8001010ek
ageWindows fatal exception: scode 0x8001010e\
ChWindows fatal exception: code 0x8001010eim
eraXWindows fatal exception: _code 0xm8001010ea
inWindows fatal exception: .code 0xp8001010ey
", line Windows fatal exception: 1018code 0x in 8001010eWindows fatal exception:
code 0x File 8001010e"
C:Windows fatal exception: \code 0xP8001010er
ogWindows fatal exception: rcode 0xa8001010em
Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimeWindows fatal exception: rcode 0xa8001010ex
\opWindows fatal exception: ecode 0xn8001010e_
coWindows fatal exception: mcode 0xm8001010ea
ndWindows fatal exception: \code 0xd8001010ei
alWindows fatal exception: ocode 0xg8001010e.
pyWindows fatal exception: "code 0x, line 8001010e135
in sWindows fatal exception: hcode 0xo8001010ew
_oWindows fatal exception: pcode 0xe8001010en
_fWindows fatal exception: icode 0xl8001010ee
_dWindows fatal exception: icode 0xa8001010el
ogWindows fatal exception:
code 0x File 8001010e"
C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lWindows fatal exception: icode 0xb8001010e\
sitWindows fatal exception: ecode 0x-8001010ep
acWindows fatal exception: kcode 0xa8001010eg
esWindows fatal exception: \code 0xc8001010eh
imWindows fatal exception: ecode 0xr8001010ea
x\Windows fatal exception: ocode 0xp8001010ee
n_Windows fatal exception: ccode 0xo8001010em
maWindows fatal exception: ncode 0xd8001010e\
diWindows fatal exception: acode 0xl8001010eo
g.Windows fatal exception: pcode 0xy8001010e"
, line 135Windows fatal exception: in code 0xs8001010eh
ow_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "Windows fatal exception: Ccode 0x:8001010e\
ProWindows fatal exception: gcode 0xr8001010ea
m Windows fatal exception: Fcode 0xi8001010el
esWindows fatal exception: \code 0xC8001010eh
imWindows fatal exception: ecode 0xr8001010ea
X Windows fatal exception: 1code 0x.8001010e3
rcWindows fatal exception: 2code 0x08001010e2
11Windows fatal exception: 1code 0x08001010e6
08Windows fatal exception: 2code 0x88001010e\
biWindows fatal exception: ncode 0x\8001010el
ibWindows fatal exception: \code 0xs8001010ei
te-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rcWindows fatal exception: 2code 0x08001010e2
111Windows fatal exception: 0code 0x68001010e0
82Windows fatal exception: 8code 0x\8001010eb
inWindows fatal exception: \code 0xl8001010ei
b\Windows fatal exception: scode 0xi8001010et
e-Windows fatal exception: pcode 0xa8001010ec
kages\chimeraxWindows fatal exception: \code 0xui\8001010eg
ui.pWindows fatal exception: ycode 0x"8001010e, line
301 in Windows fatal exception: ecode 0xv8001010ee
ntWindows fatal exception: _code 0xl8001010eo
opWindows fatal exception:
code 0x File 8001010e"
C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerWindows fatal exception: acode 0xx8001010e\
toolWindows fatal exception: bcode 0xa8001010er
\__Windows fatal exception: icode 0xn8001010ei
t_Windows fatal exception: _code 0x.8001010ep
y"Windows fatal exception: , line code 0x378001010e in
ruWindows fatal exception: ncode 0x_8001010ep
roWindows fatal exception: vcode 0xi8001010ed
erWindows fatal exception:
code 0x File 8001010e"
C:Windows fatal exception: \code 0xP8001010e
roWindows fatal exception: gcode 0xr8001010ea
m Windows fatal exception: Fcode 0xi8001010el
es\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1283 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\CWindows fatal exception: hcode 0xi8001010em
eraWindows fatal exception: Xcode 0x 8001010e1
.3Windows fatal exception: rcode 0xc8001010e2
02Windows fatal exception: 1code 0x18001010e1
06Windows fatal exception: 0code 0x88001010e2
8\Windows fatal exception: bcode 0xi8001010en
\lWindows fatal exception: icode 0xb8001010e\
siWindows fatal exception: tcode 0xe8001010e-
paWindows fatal exception: ccode 0xk8001010ea
geWindows fatal exception: scode 0x\8001010ec
hiWindows fatal exception: code 0xm8001010ee
rax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\PrograWindows fatal exception: mcode 0x 8001010eF
ilesWindows fatal exception: code 0x8001010e\
ChWindows fatal exception: icode 0xm8001010ee
raWindows fatal exception: Xcode 0x 8001010e1
.3Windows fatal exception: rcode 0xc8001010e2
02Windows fatal exception: 1code 0x18001010e1
06Windows fatal exception: 0code 0x88001010e2
8\Windows fatal exception: bcode 0xi8001010en
\lWindows fatal exception: icode 0xb8001010e\
siWindows fatal exception: tcode 0xe8001010e-
paWindows fatal exception: ccode 0xk8001010ea
ges\chimerax\core\toolshed\__init__.py", line 1283 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1Windows fatal exception: .code 0x38001010er
c20Windows fatal exception: 2code 0x18001010e1
106Windows fatal exception: 0code 0x88001010e2
8\Windows fatal exception: bcode 0xi8001010en
\lWindows fatal exception: icode 0xb8001010e\
siWindows fatal exception: tcode 0xe8001010e-
paWindows fatal exception: ccode 0xk8001010ea
geWindows fatal exception: scode 0x\8001010eC
hiWindows fatal exception: mcode 0xe8001010er
aXWindows fatal exception: _code 0xm8001010ea
inWindows fatal exception: .code 0xp8001010ey
", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc2021Windows fatal exception: 1code 0x18001010e0
608Windows fatal exception: 2code 0x88001010e\
binWindows fatal exception: \code 0xl8001010ei
b\Windows fatal exception: scode 0xi8001010et
e-Windows fatal exception: pcode 0xa8001010ec
kaWindows fatal exception: gcode 0xe8001010es
\cWindows fatal exception: hcode 0xi8001010em
erWindows fatal exception: acode 0xx8001010e\
opWindows fatal exception: ecode 0xn8001010e_
coWindows fatal exception: mcode 0xm8001010ea
ndWindows fatal exception: \code 0xd8001010ei
alog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-Windows fatal exception: pcode 0xa8001010ec
kagWindows fatal exception: ecode 0xs8001010e\
chiWindows fatal exception: mcode 0xe8001010er
axWindows fatal exception: \code 0xt8001010eo
olWindows fatal exception: bcode 0xa8001010er
\pWindows fatal exception: rcode 0xo8001010ev
idWindows fatal exception: ecode 0xr8001010es
.pWindows fatal exception: ycode 0x"8001010e, line
45 in Windows fatal exception: rcode 0xu8001010en
_pWindows fatal exception: rcode 0xo8001010ev
idWindows fatal exception: ecode 0xr8001010e
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__iWindows fatal exception: ncode 0xi8001010et
__.Windows fatal exception: pcode 0xy8001010e"
, line 1283 in Windows fatal exception: rcode 0xu8001010en
_pWindows fatal exception: rcode 0xo8001010ev
idWindows fatal exception: ecode 0xr8001010e
File "Windows fatal exception: Ccode 0x:8001010e\
PrWindows fatal exception: ocode 0xg8001010er
amWindows fatal exception: code 0xF8001010ei
leWindows fatal exception: scode 0x\8001010eC
hiWindows fatal exception: mcode 0xe8001010er
aXWindows fatal exception: code 0x18001010e.
3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\CWindows fatal exception: hcode 0xi8001010e
merWindows fatal exception: acode 0xX8001010e
1.3Windows fatal exception: rcode 0xc8001010e2
02Windows fatal exception: 1code 0x18001010e1
06Windows fatal exception: 0code 0x88001010e2
8\Windows fatal exception: bcode 0xi8001010en
\lWindows fatal exception: icode 0xb8001010e\
siWindows fatal exception: tcode 0xe8001010e-
paWindows fatal exception: ccode 0xk8001010ea
geWindows fatal exception: scode 0x\8001010eC
hiWindows fatal exception: mcode 0xe8001010er
aX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\Windows fatal exception: Ccode 0xh8001010ei
merWindows fatal exception: acode 0xX8001010e
1.3Windows fatal exception: rcode 0xc8001010e2
02Windows fatal exception: 1code 0x18001010e1
060Windows fatal exception: 8code 0x28001010e8
\binWindows fatal exception: \code 0xl8001010ei
b\Windows fatal exception: scode 0xi8001010et
e-Windows fatal exception: pcode 0xa8001010ec
kaWindows fatal exception: gcode 0xe8001010es
\cWindows fatal exception: hcode 0xi8001010em
erWindows fatal exception: acode 0xx8001010e\
open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packageWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
s\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__init__.Windows fatal exception: pcode 0xy8001010e"
, line 1283 in Windows fatal exception: rcode 0xu8001010e
nWindows fatal exception: _code 0xp8001010er
ovWindows fatal exception: code 0xi8001010ed
erWindows fatal exception:
code 0x File 8001010e"
C:Windows fatal exception: \code 0xP8001010er
ogWindows fatal exception: rcode 0xa8001010em
FWindows fatal exception: icode 0xl8001010ee
s\Windows fatal exception: code 0xC8001010eh
imWindows fatal exception: ecode 0xr8001010ea
X Windows fatal exception: 1code 0x.8001010e
3rc202111060828\bin\liWindows fatal exception: bcode 0x\8001010es
iteWindows fatal exception: -code 0xp8001010ea
ckaWindows fatal exception: code 0xg8001010ee
sWindows fatal exception: \code 0x8001010ec
hiWindows fatal exception: mcode 0xe8001010er
axWindows fatal exception: \code 0xc8001010eo
reWindows fatal exception: \code 0xt8001010eo
olWindows fatal exception: scode 0xh8001010ee
d\Windows fatal exception: icode 0xn8001010ef
o.Windows fatal exception: pcode 0xy8001010e"
, line 381Windows fatal exception: in code 0xr8001010eu
n_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1283 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1283 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1283 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1283 in run_prWindows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0x8001010e
ovider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc2Windows fatal exception: code 0x8001010e
021Windows fatal exception: 1code 0x18001010e0
608Windows fatal exception: 2code 0x88001010e\
binWindows fatal exception: \code 0xl8001010ei
b\sWindows fatal exception: icode 0xt8001010ee
-paWindows fatal exception: ccode 0xk8001010ea
geWindows fatal exception: scode 0x\8001010ec
hiWindows fatal exception: mcode 0xe8001010e
Windows fatal exception: code 0x8001010e
Windows fatal exception: code 0xr8001010ea
x\Windows fatal exception: ucode 0xi8001010e\
gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1283 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 17 in _file_open
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\providers.py", line 45 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\__init__.py", line 1283 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\toolshed\info.py", line 381 in run_provider
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\toolbar\tool.py", line 165 in callback
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e
Thread 0x00006b04 (most recent call first):
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\graphics\opengl.py", line 235 in swap_buffers
File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\graphics\opengl.py", line 496 in swap_buffers
Windows fatal exception: access violation
===== Log before crash start =====
UCSF ChimeraX version: 1.3rc202111060828 (2021-11-06)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> ui tool show AlphaFold
> alphafold predict
> MIKTKTTSLLCFLLTAVILMNPSSSSPTDNYIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVTVYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKTLILNKCGQPMEFNDQDALTKASDVIGSLGTGDGSYRTGGNGNVQGVAQCSGDLSTSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFSVGGSHARQTPGPNFGHEGEKGNKDDNGVGKTLAIIIGIVTLIILLVVFLAFVGKCCRKLQDEKWCK
Running AlphaFold prediction
Chain information for best_model.pdb #1
---
Chain | Description
A | No description available
AlphaFold prediction finished
Results in C:\Users\Jung-Youn/Downloads\ChimeraX\AlphaFold\prediction_1
Drag select of 1 residues
> color #1 yellow
> color #1 lightgray
> show #1 atoms,ribbons
> hide #1 atoms,ribbons
> show #1 atoms,ribbons
> undo
> save E:/PDLP5-alphafold.cxs includeMaps true
> alphafold predict
> MIKTKTTSLLCFLLTAVILMNPSSSSPTDNYIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVTVYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKTLILNKCGQPMEFNDQDALTKASDVIGSLGTGDGSYRTGGNGNVQGVAQCSGDLSTSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCAAAAAAAAAAARQTPGPNFGHEGEKGNKDDNGVGKTLAIIIGIVTLIILLVVFLAFVGKCCRKLQDEKWCK
Running AlphaFold prediction
> select #1
4406 atoms, 4443 bonds, 299 residues, 1 model selected
> select #1
4406 atoms, 4443 bonds, 299 residues, 1 model selected
> hide #1 models
> ~select #1
Nothing selected
> show #1 models
> select #1
4406 atoms, 4443 bonds, 299 residues, 1 model selected
> ~select #1
Nothing selected
> select #1
4406 atoms, 4443 bonds, 299 residues, 1 model selected
> ~select #1
Nothing selected
> open E:/PDLP5-alphafold.cxs
opened ChimeraX session
> show target m
> view clip false
> log metadata #1
The model has no metadata
> log chains #1
Chain information for best_model.pdb #1
---
Chain | Description
A | No description available
> select /A:1-299
4406 atoms, 4443 bonds, 299 residues, 1 model selected
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.3rc202111060828 (2021-11-06)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 3.3.0
OpenGL renderer: Quadro FX 1800/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: Dell Inc.
Model: Precision WorkStation T3500
OS: Microsoft Windows 10 Enterprise (Build 19042)
Memory: 12,882,333,696
MaxProcessMemory: 137,438,953,344
CPU: 4 Intel(R) Xeon(R) CPU W3530 @ 2.80GHz
OSLanguage: en-US
Locale: ('en_US', 'cp1252')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.10.8
cftime: 1.5.1.1
charset-normalizer: 2.0.7
ChimeraX-AddCharge: 1.1.5
ChimeraX-AddH: 2.1.10
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.30.2
ChimeraX-AtomicLibrary: 4.1.5
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.6
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.2
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3rc202111060828
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.2
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.2.6
ChimeraX-ModelPanel: 1.2.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6.5
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.13.7
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
comtypes: 1.1.10
cxservices: 1.1
cycler: 0.11.0
Cython: 0.29.24
decorator: 5.1.0
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.5.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.21
imagecodecs: 2021.4.28
imagesize: 1.2.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 3.0.1
jupyter-client: 6.1.12
jupyter-core: 4.9.1
kiwisolver: 1.3.2
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 2.0.1
matplotlib: 3.4.3
matplotlib-inline: 0.1.3
msgpack: 1.0.2
netCDF4: 1.5.7
networkx: 2.6.3
numexpr: 2.7.3
numpy: 1.21.2
openvr: 1.16.801
packaging: 21.2
ParmEd: 3.2.0
parso: 0.8.2
pickleshare: 0.7.5
Pillow: 8.3.2
pip: 21.2.4
pkginfo: 1.7.1
prompt-toolkit: 3.0.22
psutil: 5.8.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.10.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.2
pytz: 2021.3
pywin32: 228
pyzmq: 22.3.0
qtconsole: 5.1.1
QtPy: 1.11.2
RandomWords: 0.3.0
requests: 2.26.0
scipy: 1.7.1
setuptools: 57.5.0
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.1.0
sortedcontainers: 2.4.0
Sphinx: 4.2.0
sphinx-autodoc-typehints: 1.12.0
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.7
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.0
wheel-filename: 1.3.0
WMI: 1.5.1
Change History (2)
comment:1 by , 4 years ago
| Component: | Unassigned → Graphics |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash showing selection on alphafold model (swap buffers?) |
comment:2 by , 4 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
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It looks like the crash (access violation) was in OpenGL swap_buffers() called at the end of our graphics rendering and probably a graphics driver problem. The graphics card is an absolutely archaic Quadro FX 1800 released in 2009. Probably driver support for such an old card is very poor, and the card memory is very small.