Crash drawing side view

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        Windows-10-10.0.19041
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: access violation

Current thread 0x00001adc (most recent call first):
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-packages\chimerax\graphics\opengl.py", line 107 in make_current
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-packages\chimerax\graphics\opengl.py", line 478 in make_current
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-packages\chimerax\graphics\opengl.py", line 524 in use_shared_context
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-packages\chimerax\sideview\tool.py", line 142 in render
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-packages\chimerax\sideview\tool.py", line 116 in exposeEvent
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-packages\chimerax\ui\gui.py", line 293 in event_loop
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-packages\ChimeraX_main.py", line 866 in init
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-packages\ChimeraX_main.py", line 1015 in 
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.2.5\bin\lib\runpy.py", line 194 in _run_module_as_main


Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "D:\\\Mu-project\\\Figures Session\\\baseplate.cxs"

Log from Sat Nov 6 16:55:42 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "D:\\\Mu-project\\\Figures Session\\\baseplate.cxs"

Log from Sat Jun 26 09:01:50 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "C:\\\Users\\\junquan\\\Desktop\\\Figures Session\\\baseplate.cxs"

Log from Tue Jun 15 13:47:25 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open E:\\\final-atomic-model\\\all\\\spike-all.pdb

Summary of feedback from opening E:\\\final-atomic-model\\\all\\\spike-all.pdb  
---  
warning | Ignored bad PDB record found on line 4445  
END  
  
Chain information for spike-all.pdb  
---  
Chain | Description  
1.1/? 1.2/? 1.3/? | No description available  
  

> open E:/final-atomic-model/all/tube-baseplate-all.pdb

Chain information for tube-baseplate-all.pdb  
---  
Chain | Description  
2.1/? 2.2/? 2.3/? 2.4/? 2.5/? 2.6/? | No description available  
  

> open E:/final-atomic-model/all/hub-gp43-all.pdb E:/final-atomic-
> model/all/hub-gp44-all.pdb

Summary of feedback from opening E:/final-atomic-model/all/hub-gp43-all.pdb  
---  
warnings | Start residue of secondary structure not found: HELIX 8 8 ALA 286
SER 323 1 38  
Start residue of secondary structure not found: HELIX 8 8 ALA 286 SER 323 1 38  
Start residue of secondary structure not found: HELIX 8 8 ALA 286 SER 323 1 38  
  
Summary of feedback from opening E:/final-atomic-model/all/hub-gp44-all.pdb  
---  
warnings | Start residue of secondary structure not found: HELIX 1 1 LEU 8 ARG
22 1 15  
Start residue of secondary structure not found: HELIX 2 2 THR 34 VAL 56 1 23  
Start residue of secondary structure not found: HELIX 3 3 PRO 62 THR 64 1 3  
Start residue of secondary structure not found: HELIX 4 4 GLU 67 TRP 77 1 11  
Start residue of secondary structure not found: HELIX 5 5 GLU 140 GLY 142 1 3  
End residue of secondary structure not found: HELIX 6 6 ALA 178 GLN 190 1 13  
Start residue of secondary structure not found: HELIX 7 7 GLN 198 GLU 207 1 10  
Start residue of secondary structure not found: HELIX 8 8 PRO 242 ALA 253 1 12  
Start residue of secondary structure not found: HELIX 9 9 ALA 293 GLU 310 1 18  
Start residue of secondary structure not found: HELIX 10 10 PRO 319 GLY 328 1
10  
Start residue of secondary structure not found: SHEET 1 1 1 SER 88 PRO 90 0  
11 messages similar to the above omitted  
  
Chain information for hub-gp43-all.pdb  
---  
Chain | Description  
3.1/? 3.2/? 3.3/? | No description available  
3.4/? 3.5/? 3.6/? | No description available  
  
Chain information for hub-gp44-all.pdb  
---  
Chain | Description  
4.1/? 4.2/? 4.3/? | No description available  
  

> set bgColor white

> graphics silhouettes true

> open E:/final-atomic-model/unkown/tape-all.pdb

Chain information for tape-all.pdb  
---  
Chain | Description  
5.1/? 5.2/? 5.3/? | No description available  
  

> save C:\Users\junquan\Desktop\image34.png supersample 3

> open E:/final-atomic-model/all/wedge-all.pdb

Summary of feedback from opening E:/final-atomic-model/all/wedge-all.pdb  
---  
warnings | Start residue of secondary structure not found: HELIX 3 3 PRO 82
THR 101 1 20  
End residue of secondary structure not found: SHEET 3 3 1 ALA 107 LEU 115 0  
Start residue of secondary structure not found: SHEET 4 4 1 TRP 119 THR 127 0  
Start residue of secondary structure not found: HELIX 3 3 PRO 82 THR 101 1 20  
End residue of secondary structure not found: SHEET 3 3 1 ALA 107 LEU 115 0  
Start residue of secondary structure not found: HELIX 1 1 LEU 28 PHE 37 1 10  
Start residue of secondary structure not found: HELIX 2 2 LEU 72 LEU 75 1 4  
Start residue of secondary structure not found: HELIX 3 3 PRO 82 THR 101 1 20  
Start residue of secondary structure not found: SHEET 1 1 1 ILE 7 THR 9 0  
Start residue of secondary structure not found: SHEET 2 2 1 ARG 12 ASP 14 0  
79 messages similar to the above omitted  
End residue of secondary structure not found: HELIX 1 1 LEU 28 PHE 37 1 10  
Start residue of secondary structure not found: HELIX 2 2 LEU 72 LEU 75 1 4  
Start residue of secondary structure not found: HELIX 3 3 PRO 82 THR 101 1 20  
Start residue of secondary structure not found: SHEET 1 1 1 ILE 7 THR 9 0  
Start residue of secondary structure not found: SHEET 2 2 1 ARG 12 ASP 14 0  
End residue of secondary structure not found: SHEET 3 3 1 ALA 107 LEU 115 0  
Start residue of secondary structure not found: SHEET 4 4 1 TRP 119 THR 127 0  
End residue of secondary structure not found: HELIX 1 1 LEU 28 PHE 37 1 10  
Start residue of secondary structure not found: HELIX 2 2 LEU 72 LEU 75 1 4  
Start residue of secondary structure not found: HELIX 3 3 PRO 82 THR 101 1 20  
Start residue of secondary structure not found: SHEET 1 1 1 ILE 7 THR 9 0  
Start residue of secondary structure not found: SHEET 2 2 1 ARG 12 ASP 14 0  
End residue of secondary structure not found: SHEET 3 3 1 ALA 107 LEU 115 0  
Start residue of secondary structure not found: SHEET 4 4 1 TRP 119 THR 127 0  
End residue of secondary structure not found: HELIX 1 1 LEU 28 PHE 37 1 10  
Start residue of secondary structure not found: HELIX 2 2 LEU 72 LEU 75 1 4  
Start residue of secondary structure not found: HELIX 3 3 PRO 82 THR 101 1 20  
Start residue of secondary structure not found: SHEET 1 1 1 ILE 7 THR 9 0  
Start residue of secondary structure not found: SHEET 2 2 1 ARG 12 ASP 14 0  
End residue of secondary structure not found: SHEET 3 3 1 ALA 107 LEU 115 0  
Start residue of secondary structure not found: SHEET 4 4 1 TRP 119 THR 127 0  
End residue of secondary structure not found: HELIX 1 1 LEU 28 PHE 37 1 10  
Start residue of secondary structure not found: HELIX 2 2 LEU 72 LEU 75 1 4  
Start residue of secondary structure not found: HELIX 3 3 PRO 82 THR 101 1 20  
Start residue of secondary structure not found: SHEET 1 1 1 ILE 7 THR 9 0  
Start residue of secondary structure not found: SHEET 2 2 1 ARG 12 ASP 14 0  
End residue of secondary structure not found: SHEET 3 3 1 ALA 107 LEU 115 0  
Start residue of secondary structure not found: SHEET 4 4 1 TRP 119 THR 127 0  
End residue of secondary structure not found: HELIX 1 1 LEU 28 PHE 37 1 10  
Start residue of secondary structure not found: HELIX 2 2 LEU 72 LEU 75 1 4  
Start residue of secondary structure not found: HELIX 3 3 PRO 82 THR 101 1 20  
Start residue of secondary structure not found: SHEET 1 1 1 ILE 7 THR 9 0  
Start residue of secondary structure not found: SHEET 2 2 1 ARG 12 ASP 14 0  
End residue of secondary structure not found: SHEET 3 3 1 ALA 107 LEU 115 0  
Start residue of secondary structure not found: SHEET 4 4 1 TRP 119 THR 127 0  
End residue of secondary structure not found: HELIX 1 1 LEU 28 PHE 37 1 10  
Start residue of secondary structure not found: HELIX 2 2 LEU 72 LEU 75 1 4  
Start residue of secondary structure not found: HELIX 3 3 PRO 82 THR 101 1 20  
Start residue of secondary structure not found: SHEET 1 1 1 ILE 7 THR 9 0  
Start residue of secondary structure not found: SHEET 2 2 1 ARG 12 ASP 14 0  
End residue of secondary structure not found: SHEET 3 3 1 ALA 107 LEU 115 0  
Start residue of secondary structure not found: SHEET 4 4 1 TRP 119 THR 127 0  
  
Chain information for wedge-all.pdb  
---  
Chain | Description  
6.1/? | No description available  
6.2/? | No description available  
6.3/? 6.4/? 6.5/? | No description available  
6.6/? | No description available  
6.7/? 6.8/? 6.9/? 6.10/? 6.11/? 6.12/? | No description available  
6.13/? 6.14/? 6.15/? | No description available  
6.16/? 6.17/? 6.18/? | No description available  
6.19/? 6.20/? 6.21/? 6.22/? 6.23/? 6.24/? | No description available  
  

> open E:/final-atomic-model/all/sheath-baseplate-all.pdb

Chain information for sheath-baseplate-all.pdb  
---  
Chain | Description  
7.1/? 7.2/? 7.3/? 7.4/? 7.5/? 7.6/? 7.7/? 7.8/? 7.9/? 7.10/? 7.11/? 7.12/? |
No description available  
  

> save C:\Users\junquan\Desktop\image35.png supersample 3

> save C:/Users/junquan/Desktop/Figures/baseplate.cxs

——— End of log from Tue Jun 15 13:47:25 2021 ———

opened ChimeraX session  

> open E:/final-atomic-model/all/fiber-gp49-all.pdb

Summary of feedback from opening E:/final-atomic-model/all/fiber-gp49-all.pdb  
---  
warning | Ignored bad PDB record found on line 8277  
END  
  
Chain information for fiber-gp49-all.pdb  
---  
Chain | Description  
8.1/? 8.4/? 8.7/? | No description available  
8.2/? 8.5/? 8.8/? | No description available  
8.3/? 8.6/? 8.9/? | No description available  
  

> save C:\Users\junquan\Desktop\image1.png supersample 3

> save C:\Users\junquan\Desktop\image1.png supersample 3

> lighting full

> lighting simple

> lighting simple

> lighting full

> save C:\Users\junquan\Desktop\image2.png supersample 3

> save C:\Users\junquan\Desktop\image3.png supersample 3

> save "C:/Users/junquan/Desktop/Figures Session/wedge-session.cxs"

> save C:\Users\junquan\Desktop\image6.png supersample 3

> hide #!6 models

> hide #!7 models

> hide #!8 models

> save C:\Users\junquan\Desktop\image7.png supersample 3

> hide #!1 models

> show #!1 models

> hide #!2 models

> hide #!3 models

> hide #!4 models

> save C:\Users\junquan\Desktop\image8.png supersample 3

> save "C:/Users/junquan/Desktop/Figures Session/baseplate.cxs"

——— End of log from Sat Jun 26 09:01:50 2021 ———

opened ChimeraX session  

> show #!2 models

> show #!3 models

> show #!4 models

> show #!6 models

> show #!7 models

> show #!8 models

> close #1-8

> open "D:/Mu-project/Atomic model/Phenix-single-protein-all/hub-
> gp43-d-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-protein-all/hub-
> gp43-u-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-protein-all/hub-
> gp44-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-protein-all/sheath-
> gp39-B1-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-protein-
> all/sheath-gp39-B2-HF-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-
> protein-all/sheath-gp39-B2-NF-all.pdb" "D:/Mu-project/Atomic model/Phenix-
> single-protein-all/spike-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-
> protein-all/tape-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-protein-
> all/tube-gp39-B0-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-protein-
> all/tube-gp39-B-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-protein-
> all/wedge-gp46-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-protein-
> all/wedge-gp47-d0-all.pdb" "D:/Mu-project/Atomic model/Phenix-single-
> protein-all/wedge-gp47-d1-all.pdb" "D:/Mu-project/Atomic model/Phenix-
> single-protein-all/wedge-gp47-u0-all.pdb" "D:/Mu-project/Atomic
> model/Phenix-single-protein-all/wedge-gp47-u1-all.pdb" "D:/Mu-project/Atomic
> model/Phenix-single-protein-all/wedge-gp48-all.pdb"

Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/hub-gp43-d-all.pdb  
---  
warning | Ignored bad PDB record found on line 9915  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/hub-gp43-u-all.pdb  
---  
warning | Ignored bad PDB record found on line 9392  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/hub-gp44-all.pdb  
---  
warning | Ignored bad PDB record found on line 8530  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/sheath-gp39-B1-all.pdb  
---  
warning | Ignored bad PDB record found on line 22364  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/sheath-gp39-B2-HF-all.pdb  
---  
warning | Ignored bad PDB record found on line 11198  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/sheath-gp39-B2-NF-all.pdb  
---  
warning | Ignored bad PDB record found on line 11198  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/spike-all.pdb  
---  
warnings | Ignored bad PDB record found on line 1563  
TER  
  
Ignored bad PDB record found on line 3059  
TER  
  
Ignored bad PDB record found on line 4555  
TER  
  
Ignored bad PDB record found on line 4556  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/tape-all.pdb  
---  
warning | Ignored bad PDB record found on line 399  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/tube-gp39-B0-all.pdb  
---  
warning | Ignored bad PDB record found on line 5315  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/tube-gp39-B-all.pdb  
---  
warning | Ignored bad PDB record found on line 5315  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/wedge-gp46-all.pdb  
---  
warning | Ignored bad PDB record found on line 6852  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/wedge-gp47-d0-all.pdb  
---  
warning | Ignored bad PDB record found on line 8105  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/wedge-gp47-d1-all.pdb  
---  
warning | Ignored bad PDB record found on line 8105  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/wedge-gp47-u0-all.pdb  
---  
warning | Ignored bad PDB record found on line 8171  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/wedge-gp47-u1-all.pdb  
---  
warning | Ignored bad PDB record found on line 8192  
END  
  
Summary of feedback from opening D:/Mu-project/Atomic model/Phenix-single-
protein-all/wedge-gp48-all.pdb  
---  
warning | Ignored bad PDB record found on line 8435  
END  
  
Chain information for hub-gp43-d-all.pdb  
---  
Chain | Description  
1.1/? 1.2/? 1.3/? | No description available  
  
Chain information for hub-gp43-u-all.pdb  
---  
Chain | Description  
2.1/? 2.2/? 2.3/? | No description available  
  
Chain information for hub-gp44-all.pdb  
---  
Chain | Description  
3.1/? 3.2/? 3.3/? | No description available  
  
Chain information for sheath-gp39-B1-all.pdb  
---  
Chain | Description  
4.1/? 4.2/? 4.3/? 4.4/? 4.5/? 4.6/? | No description available  
  
Chain information for sheath-gp39-B2-HF-all.pdb  
---  
Chain | Description  
5.1/? 5.2/? 5.3/? | No description available  
  
Chain information for sheath-gp39-B2-NF-all.pdb  
---  
Chain | Description  
6.1/? 6.2/? 6.3/? | No description available  
  
Chain information for spike-all.pdb #7  
---  
Chain | Description  
A B C | No description available  
  
Chain information for tape-all.pdb  
---  
Chain | Description  
8.1/? 8.2/? 8.3/? | No description available  
  
Chain information for tube-gp39-B0-all.pdb  
---  
Chain | Description  
9.1/? 9.2/? 9.3/? 9.4/? 9.5/? 9.6/? | No description available  
  
Chain information for tube-gp39-B-all.pdb  
---  
Chain | Description  
10.1/? 10.2/? 10.3/? 10.4/? 10.5/? 10.6/? | No description available  
  
Chain information for wedge-gp46-all.pdb  
---  
Chain | Description  
11.1/? 11.2/? 11.3/? 11.4/? 11.5/? 11.6/? | No description available  
  
Chain information for wedge-gp47-d0-all.pdb  
---  
Chain | Description  
12.1/? 12.2/? 12.3/? | No description available  
  
Chain information for wedge-gp47-d1-all.pdb  
---  
Chain | Description  
13.1/? 13.2/? 13.3/? | No description available  
  
Chain information for wedge-gp47-u0-all.pdb  
---  
Chain | Description  
14.1/? 14.2/? 14.3/? | No description available  
  
Chain information for wedge-gp47-u1-all.pdb  
---  
Chain | Description  
15.1/? 15.2/? 15.3/? | No description available  
  
Chain information for wedge-gp48-all.pdb  
---  
Chain | Description  
16.1/? 16.2/? 16.3/? 16.4/? 16.5/? 16.6/? | No description available  
  

> open "D:/Mu-project/Atomic model/fiber-gp49-complex-all.pdb"

Summary of feedback from opening D:/Mu-project/Atomic model/fiber-
gp49-complex-all.pdb  
---  
warnings | Duplicate atom serial number found: 1  
Duplicate atom serial number found: 2  
Duplicate atom serial number found: 3  
Duplicate atom serial number found: 4  
Duplicate atom serial number found: 5  
7261 messages similar to the above omitted  
  
Chain information for fiber-gp49-complex-all.pdb #17  
---  
Chain | Description  
A D a | No description available  
B E b | No description available  
C F c | No description available  
  

> hide atoms

> show cartoons

> lighting simple

> save "D:/Mu-project/Figures Session/baseplate.cxs"

——— End of log from Sat Nov 6 16:55:42 2021 ———

opened ChimeraX session  




OpenGL version: 3.3.13399 Core Profile Forward-Compatible Context 15.201.1151.1008
OpenGL renderer: AMD Radeon HD 7000 series
OpenGL vendor: ATI Technologies Inc.
Manufacturer: Dell Inc.
Model: OptiPlex 7020
OS: Microsoft Windows 10 教育版 (Build 19043)
Memory: 12,788,658,176
MaxProcessMemory: 137,438,953,344
CPU: 8 Intel(R) Core(TM) i7-4790 CPU @ 3.60GHz
OSLanguage: zh-CN
Locale: ('zh_CN', 'cp936')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2020.12.5
    cftime: 1.5.0
    chardet: 3.0.4
    ChimeraX-AddCharge: 1.0.1
    ChimeraX-AddH: 2.1.6
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.13.2
    ChimeraX-AtomicLibrary: 3.1.3
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 1.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.5.2
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.1
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.2.1
    ChimeraX-CommandLine: 1.1.4
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.2.5
    ChimeraX-CoreFormats: 1.0
    ChimeraX-coulombic: 1.1.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.1
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.3
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.0
    ChimeraX-Hbonds: 2.1
    ChimeraX-Help: 1.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.0
    ChimeraX-ImageFormats: 1.1
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-Label: 1.0
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.0.2
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.0
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 1.2.1
    ChimeraX-MDcrds: 2.2
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.3
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.0.1
    ChimeraX-ModelPanel: 1.0.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.1
    ChimeraX-OpenCommand: 1.5
    ChimeraX-PDB: 2.4.1
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.1
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.0.1
    ChimeraX-ReadPbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.4
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SeqView: 2.3
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.0
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.0.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.3.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.0.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.7.6
    ChimeraX-uniprot: 2.1
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.3
    comtypes: 1.1.7
    cxservices: 1.0
    cycler: 0.10.0
    Cython: 0.29.21
    decorator: 5.0.9
    distlib: 0.3.1
    docutils: 0.16
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 2.10.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.17
    imagecodecs: 2020.5.30
    imagesize: 1.2.0
    ipykernel: 5.3.4
    ipython: 7.18.1
    ipython-genutils: 0.2.0
    jedi: 0.17.2
    Jinja2: 2.11.2
    jupyter-client: 6.1.7
    jupyter-core: 4.7.1
    kiwisolver: 1.3.1
    line-profiler: 2.1.2
    lxml: 4.6.2
    lz4: 3.1.0
    MarkupSafe: 2.0.1
    matplotlib: 3.3.2
    msgpack: 1.0.0
    netCDF4: 1.5.4
    networkx: 2.5
    numexpr: 2.7.3
    numpy: 1.19.2
    numpydoc: 1.1.0
    openvr: 1.14.1501
    packaging: 20.9
    ParmEd: 3.2.0
    parso: 0.7.1
    pickleshare: 0.7.5
    Pillow: 7.2.0
    pip: 21.0.1
    pkginfo: 1.5.0.1
    prompt-toolkit: 3.0.18
    psutil: 5.7.2
    pycollada: 0.7.1
    pydicom: 2.0.0
    Pygments: 2.7.1
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.1
    pytz: 2021.1
    pywin32: 228
    pyzmq: 22.0.3
    qtconsole: 4.7.7
    QtPy: 1.9.0
    RandomWords: 0.3.0
    requests: 2.24.0
    scipy: 1.5.2
    setuptools: 50.3.2
    sfftk-rw: 0.6.7.dev1
    six: 1.15.0
    snowballstemmer: 2.1.0
    sortedcontainers: 2.2.2
    Sphinx: 3.2.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2020.9.3
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.0.5
    urllib3: 1.25.11
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.36.0
    wheel-filename: 1.3.0
    WMI: 1.5.1