Opened 9 years ago

Closed 9 years ago

Last modified 7 years ago

#514 closed enhancement (fixed)

Make mmCIF read aniso_u (temperature factors)

Reported by: Tom Goddard Owned by: Greg Couch
Priority: major Milestone:
Component: Input/Output Version:
Keywords: Cc: tic20@…
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

Would like the mmCIF file reader to read anisotropic temperature factors from the _atom_site_anisotrop
table. The PDB file reader correctly reads these. An example PDB entry is 3a02.

Tristan Croll needs this for calculating maps from molecular structures using the ccp4 Clipper library.

Change History (2)

comment:1 by Greg Couch, 9 years ago

Resolution: fixed
Status: assignedclosed

Support for atom_site_anisotrop table has been added for just the U matrix. It is assumed to be a fixed column table the same way the atom_site table is.

Please file another ticket if B matrix support is needed or if atom_site.aniso_U* support is needed.

comment:2 by Eric Pettersen, 7 years ago

Component: mmCIF Reader/WriterInput/Output

reducing # of categories, so lumping into I/O category

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